Query 016921
Match_columns 380
No_of_seqs 401 out of 3662
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 06:00:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016921.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016921hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bus_A REBM, methyltransferase 100.0 4.8E-32 1.6E-36 248.1 29.2 266 97-379 7-273 (273)
2 2o57_A Putative sarcosine dime 100.0 1.1E-31 3.7E-36 248.9 26.0 270 92-380 16-295 (297)
3 1kpg_A CFA synthase;, cyclopro 100.0 2.8E-28 9.7E-33 224.7 28.2 269 95-378 8-287 (287)
4 3hem_A Cyclopropane-fatty-acyl 100.0 8.6E-28 3E-32 223.2 28.0 271 92-378 13-302 (302)
5 2fk8_A Methoxy mycolic acid sy 100.0 2.5E-27 8.7E-32 221.6 23.0 276 92-380 31-315 (318)
6 3ujc_A Phosphoethanolamine N-m 99.9 3.7E-26 1.3E-30 207.8 18.3 221 141-379 43-266 (266)
7 3vc1_A Geranyl diphosphate 2-C 99.9 9.5E-26 3.2E-30 210.5 18.9 209 139-378 102-311 (312)
8 3f4k_A Putative methyltransfer 99.9 5.7E-24 1.9E-28 192.5 24.0 155 158-323 46-200 (257)
9 1nkv_A Hypothetical protein YJ 99.9 3.5E-24 1.2E-28 193.8 20.8 165 141-320 24-188 (256)
10 3kkz_A Uncharacterized protein 99.9 2.9E-23 1E-27 189.1 22.5 154 158-322 46-199 (267)
11 1vl5_A Unknown conserved prote 99.9 2.9E-23 9.7E-28 188.4 21.2 168 142-322 26-193 (260)
12 4htf_A S-adenosylmethionine-de 99.9 1.8E-23 6E-28 192.4 19.2 176 139-322 55-235 (285)
13 2yqz_A Hypothetical protein TT 99.9 4.1E-23 1.4E-27 187.4 17.6 153 158-319 39-196 (263)
14 3mgg_A Methyltransferase; NYSG 99.9 1.9E-22 6.6E-27 184.5 20.8 164 158-324 37-203 (276)
15 4gek_A TRNA (CMO5U34)-methyltr 99.9 9.6E-23 3.3E-27 184.8 17.1 153 158-316 70-242 (261)
16 3ccf_A Cyclopropane-fatty-acyl 99.9 4.3E-22 1.5E-26 182.6 18.8 154 158-323 57-214 (279)
17 2p35_A Trans-aconitate 2-methy 99.9 1.3E-21 4.3E-26 177.2 20.0 157 141-314 21-185 (259)
18 3dtn_A Putative methyltransfer 99.9 8.9E-23 3E-27 182.1 11.6 157 158-322 44-217 (234)
19 3ege_A Putative methyltransfer 99.9 5E-22 1.7E-26 180.4 16.7 162 141-324 22-183 (261)
20 1xxl_A YCGJ protein; structura 99.9 2.2E-21 7.6E-26 173.8 19.4 168 142-322 10-177 (239)
21 3h2b_A SAM-dependent methyltra 99.9 2E-22 6.7E-27 175.9 11.6 179 98-321 4-184 (203)
22 3hnr_A Probable methyltransfer 99.9 8.4E-23 2.9E-27 180.4 9.4 150 159-319 46-201 (220)
23 3dlc_A Putative S-adenosyl-L-m 99.9 5.4E-22 1.9E-26 174.6 14.5 169 140-320 31-204 (219)
24 2p7i_A Hypothetical protein; p 99.9 1.3E-21 4.6E-26 175.5 16.2 147 159-320 43-200 (250)
25 3dh0_A SAM dependent methyltra 99.9 3.2E-21 1.1E-25 170.1 18.2 156 143-322 27-184 (219)
26 3gu3_A Methyltransferase; alph 99.9 1.1E-20 3.7E-25 173.7 20.4 205 158-367 22-255 (284)
27 3l8d_A Methyltransferase; stru 99.9 3.6E-21 1.2E-25 172.4 16.7 149 158-320 53-201 (242)
28 2ex4_A Adrenal gland protein A 99.9 2.5E-21 8.5E-26 173.6 15.5 199 92-321 27-227 (241)
29 3bkx_A SAM-dependent methyltra 99.9 1.1E-20 3.9E-25 172.5 19.9 183 134-323 24-223 (275)
30 3g5t_A Trans-aconitate 3-methy 99.9 2.7E-20 9.3E-25 172.3 21.5 160 158-321 36-211 (299)
31 3ou2_A SAM-dependent methyltra 99.9 1.4E-20 5E-25 165.5 18.6 190 94-319 6-205 (218)
32 1xtp_A LMAJ004091AAA; SGPP, st 99.9 9.4E-21 3.2E-25 170.9 16.5 189 95-320 49-239 (254)
33 4fsd_A Arsenic methyltransfera 99.9 5.9E-21 2E-25 182.9 16.0 154 157-318 82-250 (383)
34 4hg2_A Methyltransferase type 99.8 1.1E-20 3.7E-25 170.8 14.5 100 159-267 40-139 (257)
35 3ocj_A Putative exported prote 99.8 2.3E-20 7.7E-25 173.4 16.7 163 158-321 118-293 (305)
36 1pjz_A Thiopurine S-methyltran 99.8 1.6E-20 5.4E-25 164.0 13.3 154 142-321 11-178 (203)
37 3lcc_A Putative methyl chlorid 99.8 2.9E-20 1E-24 165.9 15.2 145 159-325 67-213 (235)
38 4e2x_A TCAB9; kijanose, tetron 99.8 9.7E-22 3.3E-26 190.5 5.9 162 135-320 89-254 (416)
39 1ri5_A MRNA capping enzyme; me 99.8 8.1E-20 2.8E-24 168.6 18.0 165 158-322 64-253 (298)
40 3sm3_A SAM-dependent methyltra 99.8 7.3E-20 2.5E-24 162.8 16.9 159 158-320 30-208 (235)
41 3dli_A Methyltransferase; PSI- 99.8 2.3E-20 7.8E-25 167.2 13.5 141 158-320 41-185 (240)
42 3e23_A Uncharacterized protein 99.8 7.6E-20 2.6E-24 160.4 14.6 138 158-320 43-183 (211)
43 3fpf_A Mtnas, putative unchara 99.8 2.6E-19 8.7E-24 162.9 18.1 160 90-263 60-222 (298)
44 3g5l_A Putative S-adenosylmeth 99.8 1.5E-19 5E-24 163.1 16.4 160 158-322 44-219 (253)
45 1vlm_A SAM-dependent methyltra 99.8 2.6E-19 8.8E-24 158.1 16.3 139 159-320 48-189 (219)
46 3e8s_A Putative SAM dependent 99.8 2E-20 6.7E-25 165.5 9.0 152 159-320 53-210 (227)
47 3gwz_A MMCR; methyltransferase 99.8 2.1E-18 7.2E-23 164.4 23.0 164 141-319 190-356 (369)
48 2aot_A HMT, histamine N-methyl 99.8 1.2E-19 4.2E-24 167.4 13.9 150 158-317 52-219 (292)
49 3i53_A O-methyltransferase; CO 99.8 7.7E-19 2.6E-23 165.0 19.1 152 158-321 169-323 (332)
50 1x19_A CRTF-related protein; m 99.8 7.8E-19 2.7E-23 166.8 19.4 169 141-320 178-349 (359)
51 3jwh_A HEN1; methyltransferase 99.8 2.1E-19 7.1E-24 158.4 13.9 148 159-315 30-188 (217)
52 3i9f_A Putative type 11 methyl 99.8 1.6E-19 5.3E-24 152.9 11.7 134 158-321 17-150 (170)
53 2r3s_A Uncharacterized protein 99.8 1.6E-18 5.5E-23 162.9 19.8 170 141-322 151-326 (335)
54 1y8c_A S-adenosylmethionine-de 99.8 4.6E-19 1.6E-23 158.7 15.4 103 158-264 37-143 (246)
55 3g2m_A PCZA361.24; SAM-depende 99.8 1E-19 3.5E-24 168.4 11.4 173 141-322 71-277 (299)
56 2gs9_A Hypothetical protein TT 99.8 8.1E-19 2.8E-23 153.8 16.5 134 158-310 36-171 (211)
57 3dp7_A SAM-dependent methyltra 99.8 5.3E-19 1.8E-23 168.1 16.3 157 159-318 180-341 (363)
58 3cc8_A Putative methyltransfer 99.8 1.7E-18 5.7E-23 153.3 18.3 146 158-323 32-189 (230)
59 3jwg_A HEN1, methyltransferase 99.8 3E-19 1E-23 157.6 12.7 149 159-316 30-189 (219)
60 3pfg_A N-methyltransferase; N, 99.8 1E-19 3.5E-24 165.2 9.8 99 159-265 51-153 (263)
61 3bkw_A MLL3908 protein, S-aden 99.8 1.3E-18 4.4E-23 155.7 16.8 154 158-320 43-215 (243)
62 1qzz_A RDMB, aclacinomycin-10- 99.8 3.8E-18 1.3E-22 162.8 19.4 166 143-322 172-342 (374)
63 2a14_A Indolethylamine N-methy 99.8 7.5E-20 2.6E-24 166.3 7.0 164 135-320 38-239 (263)
64 2avn_A Ubiquinone/menaquinone 99.8 8.4E-19 2.9E-23 159.0 13.9 152 159-322 55-216 (260)
65 2xvm_A Tellurite resistance pr 99.8 2.8E-18 9.7E-23 148.6 16.7 139 159-319 33-173 (199)
66 2gb4_A Thiopurine S-methyltran 99.8 1.1E-18 3.9E-23 157.2 14.0 142 158-320 68-228 (252)
67 2g72_A Phenylethanolamine N-me 99.8 8.4E-19 2.9E-23 161.5 11.8 149 158-321 71-258 (289)
68 1ve3_A Hypothetical protein PH 99.8 1.6E-18 5.6E-23 153.4 13.2 104 159-265 39-144 (227)
69 3lst_A CALO1 methyltransferase 99.8 6.3E-18 2.1E-22 159.8 17.4 160 142-318 173-335 (348)
70 3mcz_A O-methyltransferase; ad 99.8 7.7E-18 2.6E-22 159.4 17.4 153 159-316 180-336 (352)
71 3g07_A 7SK snRNA methylphospha 99.8 5.6E-19 1.9E-23 163.0 9.3 152 158-318 46-268 (292)
72 2ip2_A Probable phenazine-spec 99.8 1.1E-17 3.6E-22 157.3 17.7 163 142-319 157-322 (334)
73 2kw5_A SLR1183 protein; struct 99.8 3E-18 1E-22 149.1 12.6 142 159-322 31-174 (202)
74 3bxo_A N,N-dimethyltransferase 99.8 9E-18 3.1E-22 149.8 15.9 100 159-266 41-144 (239)
75 3d2l_A SAM-dependent methyltra 99.8 7.2E-18 2.5E-22 150.8 15.3 100 159-263 34-137 (243)
76 1tw3_A COMT, carminomycin 4-O- 99.8 1.4E-17 4.6E-22 158.2 18.0 164 143-320 173-340 (360)
77 3thr_A Glycine N-methyltransfe 99.8 8.9E-18 3E-22 154.7 15.0 105 159-264 58-176 (293)
78 2p8j_A S-adenosylmethionine-de 99.8 5.7E-19 1.9E-23 154.4 6.3 156 158-318 23-182 (209)
79 3ggd_A SAM-dependent methyltra 99.8 9.4E-18 3.2E-22 150.5 14.0 154 158-322 56-222 (245)
80 3orh_A Guanidinoacetate N-meth 99.8 4.8E-19 1.6E-23 158.3 5.4 104 158-263 60-170 (236)
81 3e05_A Precorrin-6Y C5,15-meth 99.7 1.4E-16 4.9E-21 138.7 20.0 136 143-318 30-166 (204)
82 2vdw_A Vaccinia virus capping 99.7 6.4E-18 2.2E-22 156.3 11.8 164 158-321 48-248 (302)
83 3reo_A (ISO)eugenol O-methyltr 99.7 8E-17 2.7E-21 153.3 19.6 151 158-321 203-357 (368)
84 3p9c_A Caffeic acid O-methyltr 99.7 1.2E-16 4E-21 151.9 20.3 163 141-321 188-355 (364)
85 2qe6_A Uncharacterized protein 99.7 7.6E-17 2.6E-21 147.1 18.3 160 139-315 62-238 (274)
86 2i62_A Nicotinamide N-methyltr 99.7 9.7E-18 3.3E-22 152.0 12.2 149 158-322 56-242 (265)
87 3njr_A Precorrin-6Y methylase; 99.7 1.1E-16 3.7E-21 139.7 18.0 133 144-317 46-178 (204)
88 3giw_A Protein of unknown func 99.7 1.8E-17 6E-22 149.1 12.2 146 159-315 79-243 (277)
89 3cgg_A SAM-dependent methyltra 99.7 4.2E-17 1.4E-21 140.4 14.2 126 158-318 46-174 (195)
90 3ofk_A Nodulation protein S; N 99.7 2E-17 6.9E-22 145.4 12.2 102 158-264 51-155 (216)
91 4a6d_A Hydroxyindole O-methylt 99.7 2.3E-16 7.7E-21 149.3 20.0 154 158-320 179-335 (353)
92 2zfu_A Nucleomethylin, cerebra 99.7 1.6E-17 5.6E-22 145.9 10.6 113 158-319 67-179 (215)
93 1zx0_A Guanidinoacetate N-meth 99.7 5E-18 1.7E-22 151.6 7.4 105 158-264 60-171 (236)
94 3hm2_A Precorrin-6Y C5,15-meth 99.7 8.4E-17 2.9E-21 136.8 14.4 137 141-317 13-151 (178)
95 1fp1_D Isoliquiritigenin 2'-O- 99.7 7.6E-17 2.6E-21 153.7 15.5 161 141-319 196-360 (372)
96 3m70_A Tellurite resistance pr 99.7 7.8E-17 2.7E-21 148.0 15.1 138 159-319 121-260 (286)
97 3mti_A RRNA methylase; SAM-dep 99.7 8.6E-17 3E-21 137.8 12.1 106 158-265 22-137 (185)
98 1yzh_A TRNA (guanine-N(7)-)-me 99.7 4E-16 1.4E-20 137.1 16.4 128 159-317 42-180 (214)
99 1fp2_A Isoflavone O-methyltran 99.7 3.7E-16 1.3E-20 147.9 15.7 147 158-318 188-340 (352)
100 1wzn_A SAM-dependent methyltra 99.7 3.6E-16 1.2E-20 140.6 14.8 116 139-263 27-145 (252)
101 3grz_A L11 mtase, ribosomal pr 99.7 2.2E-16 7.7E-21 137.6 12.6 127 158-320 60-186 (205)
102 3m33_A Uncharacterized protein 99.7 1.3E-16 4.4E-21 141.4 11.2 119 158-320 48-168 (226)
103 4df3_A Fibrillarin-like rRNA/T 99.7 4.2E-16 1.4E-20 137.5 14.2 145 151-321 70-219 (233)
104 3mq2_A 16S rRNA methyltransfer 99.7 8.6E-17 2.9E-21 141.6 9.8 150 158-321 27-186 (218)
105 3bgv_A MRNA CAP guanine-N7 met 99.7 3.4E-16 1.2E-20 145.7 14.2 108 158-265 34-157 (313)
106 1fbn_A MJ fibrillarin homologu 99.7 5.1E-16 1.7E-20 138.0 13.9 135 157-321 73-215 (230)
107 1xdz_A Methyltransferase GIDB; 99.7 2E-16 6.8E-21 141.6 11.3 130 158-320 70-203 (240)
108 2fca_A TRNA (guanine-N(7)-)-me 99.7 6.1E-16 2.1E-20 135.9 14.1 104 159-263 39-153 (213)
109 3p9n_A Possible methyltransfer 99.7 1.1E-15 3.7E-20 131.6 15.4 107 158-265 44-155 (189)
110 3p2e_A 16S rRNA methylase; met 99.7 2.6E-17 9E-22 145.8 5.3 152 158-322 24-188 (225)
111 3evz_A Methyltransferase; NYSG 99.7 1.2E-15 4E-20 135.4 16.0 130 158-318 55-205 (230)
112 3lpm_A Putative methyltransfer 99.7 8.5E-16 2.9E-20 139.1 15.0 131 158-319 49-201 (259)
113 2b3t_A Protein methyltransfera 99.7 1.4E-15 4.7E-20 139.0 16.2 140 139-317 96-261 (276)
114 3dxy_A TRNA (guanine-N(7)-)-me 99.7 2.8E-16 9.4E-21 138.5 10.8 104 159-263 35-150 (218)
115 3uwp_A Histone-lysine N-methyl 99.7 3.3E-16 1.1E-20 147.6 11.6 124 138-267 158-292 (438)
116 3eey_A Putative rRNA methylase 99.7 2.6E-16 8.9E-21 136.2 10.1 108 158-265 22-141 (197)
117 1dus_A MJ0882; hypothetical pr 99.7 1.5E-15 5.1E-20 130.5 14.4 117 141-264 40-158 (194)
118 2ld4_A Anamorsin; methyltransf 99.7 3.5E-16 1.2E-20 133.0 9.9 119 157-318 11-133 (176)
119 3g89_A Ribosomal RNA small sub 99.6 1.3E-15 4.3E-20 137.0 13.7 132 157-321 79-214 (249)
120 3mb5_A SAM-dependent methyltra 99.6 1.2E-15 4.2E-20 137.5 13.7 137 143-320 83-223 (255)
121 3lbf_A Protein-L-isoaspartate 99.6 1.8E-15 6E-20 132.3 14.2 111 141-264 65-175 (210)
122 3q87_B N6 adenine specific DNA 99.6 1.1E-15 3.7E-20 129.4 12.4 119 159-321 24-151 (170)
123 2yxd_A Probable cobalt-precorr 99.6 3.9E-15 1.3E-19 126.7 15.8 132 141-316 23-154 (183)
124 2pwy_A TRNA (adenine-N(1)-)-me 99.6 1.9E-15 6.7E-20 136.3 14.4 135 143-318 86-223 (258)
125 2h00_A Methyltransferase 10 do 99.6 1.3E-16 4.4E-21 144.0 6.5 168 137-321 47-240 (254)
126 3dmg_A Probable ribosomal RNA 99.6 9.5E-16 3.2E-20 146.0 12.5 103 158-263 233-340 (381)
127 1l3i_A Precorrin-6Y methyltran 99.6 2.1E-15 7.1E-20 129.4 13.5 131 143-313 23-154 (192)
128 2frn_A Hypothetical protein PH 99.6 2.4E-15 8.2E-20 137.5 14.6 129 158-315 125-253 (278)
129 1zg3_A Isoflavanone 4'-O-methy 99.6 1.5E-15 5.2E-20 144.0 13.6 148 159-319 194-347 (358)
130 1yb2_A Hypothetical protein TA 99.6 1.2E-15 4.3E-20 139.2 11.6 125 158-319 110-237 (275)
131 2fyt_A Protein arginine N-meth 99.6 2.8E-15 9.5E-20 141.0 14.3 102 158-260 64-168 (340)
132 2pxx_A Uncharacterized protein 99.6 7.3E-16 2.5E-20 134.9 9.1 104 158-264 42-160 (215)
133 3iv6_A Putative Zn-dependent a 99.6 2E-15 6.9E-20 135.9 11.1 110 141-264 33-149 (261)
134 1jsx_A Glucose-inhibited divis 99.6 4.2E-15 1.4E-19 129.6 12.9 99 159-263 66-165 (207)
135 4dzr_A Protein-(glutamine-N5) 99.6 2.4E-16 8.3E-21 137.8 4.8 143 139-318 15-191 (215)
136 3q7e_A Protein arginine N-meth 99.6 3.5E-15 1.2E-19 140.8 13.0 104 158-262 66-172 (349)
137 2nxc_A L11 mtase, ribosomal pr 99.6 3.5E-15 1.2E-19 134.7 12.3 125 158-319 120-244 (254)
138 3htx_A HEN1; HEN1, small RNA m 99.6 5.3E-15 1.8E-19 149.2 14.2 105 159-265 722-836 (950)
139 1o54_A SAM-dependent O-methylt 99.6 8.4E-15 2.9E-19 133.8 14.1 136 143-319 102-239 (277)
140 3r0q_C Probable protein argini 99.6 5.1E-15 1.7E-19 141.1 12.8 103 158-263 63-169 (376)
141 3gdh_A Trimethylguanosine synt 99.6 1.6E-16 5.5E-21 142.1 2.2 140 159-320 79-220 (241)
142 3u81_A Catechol O-methyltransf 99.6 3.9E-15 1.3E-19 131.4 10.7 105 159-264 59-171 (221)
143 3dr5_A Putative O-methyltransf 99.6 7.1E-15 2.4E-19 129.7 12.4 122 137-266 40-166 (221)
144 2ift_A Putative methylase HI07 99.6 1.8E-15 6.1E-20 131.6 8.3 106 159-265 54-165 (201)
145 1nt2_A Fibrillarin-like PRE-rR 99.6 1.2E-14 4.1E-19 127.2 13.6 101 157-263 56-161 (210)
146 3lec_A NADB-rossmann superfami 99.6 1.1E-14 3.7E-19 128.0 12.9 126 158-317 21-147 (230)
147 3tfw_A Putative O-methyltransf 99.6 3E-14 1E-18 128.0 15.9 105 159-266 64-173 (248)
148 3ckk_A TRNA (guanine-N(7)-)-me 99.6 6.2E-15 2.1E-19 131.3 11.3 105 158-263 46-168 (235)
149 1dl5_A Protein-L-isoaspartate 99.6 1.4E-14 4.9E-19 134.9 14.2 112 141-264 63-176 (317)
150 2b25_A Hypothetical protein; s 99.6 8.2E-15 2.8E-19 137.7 12.7 160 143-320 95-282 (336)
151 2esr_A Methyltransferase; stru 99.6 2.1E-15 7.2E-20 128.2 7.8 119 141-265 18-140 (177)
152 1g6q_1 HnRNP arginine N-methyl 99.6 1.1E-14 3.9E-19 136.2 13.5 102 159-261 39-143 (328)
153 2ipx_A RRNA 2'-O-methyltransfe 99.6 1.3E-14 4.5E-19 129.0 13.3 139 157-321 76-219 (233)
154 3fzg_A 16S rRNA methylase; met 99.6 1.6E-15 5.5E-20 128.0 6.8 102 159-263 50-152 (200)
155 3bzb_A Uncharacterized protein 99.6 3.1E-14 1.1E-18 130.4 15.9 135 158-318 79-236 (281)
156 1vbf_A 231AA long hypothetical 99.6 1.5E-14 5E-19 128.4 13.3 109 141-264 58-166 (231)
157 2fhp_A Methylase, putative; al 99.6 6.1E-15 2.1E-19 126.2 10.2 107 158-265 44-156 (187)
158 2yxe_A Protein-L-isoaspartate 99.6 2.1E-14 7.2E-19 125.9 13.8 112 141-264 65-178 (215)
159 2fpo_A Methylase YHHF; structu 99.6 5.5E-15 1.9E-19 128.6 9.9 104 159-264 55-161 (202)
160 1u2z_A Histone-lysine N-methyl 99.6 1.7E-14 5.7E-19 138.6 14.0 119 140-264 229-360 (433)
161 1i9g_A Hypothetical protein RV 99.6 2.2E-14 7.6E-19 131.0 13.9 113 142-264 88-204 (280)
162 2y1w_A Histone-arginine methyl 99.6 1.7E-14 5.7E-19 136.2 13.3 103 158-262 50-154 (348)
163 3ntv_A MW1564 protein; rossman 99.6 2.2E-14 7.5E-19 127.6 13.3 105 159-266 72-179 (232)
164 1af7_A Chemotaxis receptor met 99.6 5.7E-15 1.9E-19 134.1 9.5 104 159-262 106-251 (274)
165 3hp7_A Hemolysin, putative; st 99.6 1.4E-14 4.9E-19 131.8 12.0 152 141-319 72-232 (291)
166 3duw_A OMT, O-methyltransferas 99.6 3.8E-14 1.3E-18 125.0 14.4 104 159-265 59-169 (223)
167 3kr9_A SAM-dependent methyltra 99.6 2.4E-14 8.1E-19 125.6 12.8 125 158-317 15-141 (225)
168 3gnl_A Uncharacterized protein 99.6 2.1E-14 7E-19 127.3 12.3 126 158-317 21-147 (244)
169 4azs_A Methyltransferase WBDD; 99.6 6.2E-15 2.1E-19 148.0 9.8 105 159-265 67-175 (569)
170 3id6_C Fibrillarin-like rRNA/T 99.5 1.6E-13 5.5E-18 121.2 17.0 138 157-321 75-218 (232)
171 3r3h_A O-methyltransferase, SA 99.5 1.6E-14 5.4E-19 129.3 10.2 107 159-268 61-175 (242)
172 3c3p_A Methyltransferase; NP_9 99.5 2.9E-14 1E-18 124.6 11.7 103 159-265 57-162 (210)
173 3bwc_A Spermidine synthase; SA 99.5 1.3E-14 4.4E-19 134.3 9.6 137 158-320 95-241 (304)
174 2yvl_A TRMI protein, hypotheti 99.5 1.5E-13 5.1E-18 123.1 15.9 110 143-263 81-190 (248)
175 2gpy_A O-methyltransferase; st 99.5 5.5E-14 1.9E-18 124.9 13.0 104 159-265 55-162 (233)
176 4dcm_A Ribosomal RNA large sub 99.5 5.2E-14 1.8E-18 133.8 13.6 104 159-263 223-334 (375)
177 2ozv_A Hypothetical protein AT 99.5 3.5E-14 1.2E-18 128.5 11.5 106 158-263 36-170 (260)
178 1i1n_A Protein-L-isoaspartate 99.5 9.2E-14 3.1E-18 122.8 14.0 101 158-264 77-183 (226)
179 1g8a_A Fibrillarin-like PRE-rR 99.5 1.3E-13 4.6E-18 121.9 14.9 137 157-321 72-214 (227)
180 1jg1_A PIMT;, protein-L-isoasp 99.5 6.1E-14 2.1E-18 124.9 12.2 111 141-264 79-190 (235)
181 3tr6_A O-methyltransferase; ce 99.5 3.9E-14 1.3E-18 125.1 10.7 105 159-266 65-177 (225)
182 1ixk_A Methyltransferase; open 99.5 1E-13 3.6E-18 128.8 14.0 131 158-316 118-272 (315)
183 1o9g_A RRNA methyltransferase; 99.5 2.1E-14 7.3E-19 129.1 8.8 120 140-264 38-215 (250)
184 3opn_A Putative hemolysin; str 99.5 7.8E-15 2.7E-19 130.3 5.7 153 141-320 24-185 (232)
185 2pbf_A Protein-L-isoaspartate 99.5 9.2E-14 3.1E-18 122.9 12.3 101 158-264 80-194 (227)
186 1p91_A Ribosomal RNA large sub 99.5 1.4E-13 4.9E-18 124.9 13.9 96 158-266 85-181 (269)
187 3tma_A Methyltransferase; thum 99.5 2.7E-13 9.3E-18 128.2 16.3 117 141-263 191-317 (354)
188 1sui_A Caffeoyl-COA O-methyltr 99.5 7.4E-14 2.5E-18 125.3 11.7 104 159-265 80-192 (247)
189 3b3j_A Histone-arginine methyl 99.5 5.4E-14 1.8E-18 137.8 11.7 117 139-262 144-262 (480)
190 1ws6_A Methyltransferase; stru 99.5 1.5E-14 5.2E-19 121.8 6.4 103 159-266 42-150 (171)
191 2vdv_E TRNA (guanine-N(7)-)-me 99.5 1.3E-13 4.5E-18 123.6 12.9 105 158-263 49-173 (246)
192 4hc4_A Protein arginine N-meth 99.5 9.8E-14 3.3E-18 131.1 12.3 101 159-261 84-187 (376)
193 1r18_A Protein-L-isoaspartate( 99.5 8.9E-14 3E-18 123.1 10.7 100 158-264 84-195 (227)
194 1ej0_A FTSJ; methyltransferase 99.5 8.2E-14 2.8E-18 117.6 9.7 95 158-264 22-137 (180)
195 2igt_A SAM dependent methyltra 99.5 1.7E-13 5.7E-18 128.2 12.0 105 159-264 154-273 (332)
196 2pjd_A Ribosomal RNA small sub 99.5 1.2E-13 4E-18 130.1 10.5 102 159-264 197-304 (343)
197 2bm8_A Cephalosporin hydroxyla 99.5 1.1E-13 3.6E-18 123.4 9.3 97 159-264 82-188 (236)
198 3tm4_A TRNA (guanine N2-)-meth 99.5 6.3E-13 2.1E-17 126.5 15.2 127 158-319 217-352 (373)
199 3cbg_A O-methyltransferase; cy 99.5 2.6E-13 8.8E-18 120.6 11.2 105 159-266 73-185 (232)
200 2hnk_A SAM-dependent O-methylt 99.5 3.5E-13 1.2E-17 120.2 12.0 104 159-265 61-183 (239)
201 3sso_A Methyltransferase; macr 99.5 3.9E-14 1.3E-18 133.2 5.9 96 159-265 217-326 (419)
202 1nv8_A HEMK protein; class I a 99.5 3.4E-13 1.2E-17 123.5 11.7 101 159-262 124-248 (284)
203 3c3y_A Pfomt, O-methyltransfer 99.5 3.9E-13 1.3E-17 119.9 11.7 103 159-264 71-182 (237)
204 2qm3_A Predicted methyltransfe 99.4 1.9E-12 6.6E-17 123.2 17.0 103 158-263 172-277 (373)
205 3a27_A TYW2, uncharacterized p 99.4 3.3E-13 1.1E-17 122.9 11.1 102 158-265 119-221 (272)
206 3k6r_A Putative transferase PH 99.4 1E-12 3.6E-17 119.1 13.9 128 158-314 125-252 (278)
207 1zq9_A Probable dimethyladenos 99.4 1.3E-13 4.3E-18 126.5 7.6 86 141-234 16-101 (285)
208 2plw_A Ribosomal RNA methyltra 99.4 5.9E-13 2E-17 115.3 11.3 95 158-264 22-155 (201)
209 2avd_A Catechol-O-methyltransf 99.4 3.6E-13 1.2E-17 119.2 10.0 104 159-265 70-181 (229)
210 2yxl_A PH0851 protein, 450AA l 99.4 3.4E-12 1.2E-16 124.4 16.4 107 158-265 259-391 (450)
211 3ajd_A Putative methyltransfer 99.4 7.5E-13 2.6E-17 120.6 10.0 106 158-264 83-212 (274)
212 1wy7_A Hypothetical protein PH 99.4 1E-11 3.5E-16 107.9 16.6 126 158-320 49-176 (207)
213 3adn_A Spermidine synthase; am 99.4 7.1E-13 2.4E-17 121.7 9.3 105 159-263 84-198 (294)
214 3dou_A Ribosomal RNA large sub 99.4 1.9E-12 6.5E-17 111.5 9.2 107 141-264 12-140 (191)
215 1xj5_A Spermidine synthase 1; 99.4 1.2E-12 4.2E-17 122.2 8.4 104 159-262 121-234 (334)
216 2wa2_A Non-structural protein 99.3 2.3E-13 7.8E-18 123.8 3.1 102 158-265 82-195 (276)
217 1ne2_A Hypothetical protein TA 99.3 1.3E-11 4.4E-16 106.8 14.0 87 158-253 51-139 (200)
218 3gjy_A Spermidine synthase; AP 99.3 1.9E-12 6.5E-17 119.2 9.1 105 159-264 90-201 (317)
219 2nyu_A Putative ribosomal RNA 99.3 5.7E-12 1.9E-16 108.5 11.6 95 158-264 22-146 (196)
220 2oxt_A Nucleoside-2'-O-methylt 99.3 2.8E-13 9.6E-18 122.6 3.3 102 158-265 74-187 (265)
221 2o07_A Spermidine synthase; st 99.3 1.1E-12 3.9E-17 121.1 6.9 105 159-263 96-209 (304)
222 1uir_A Polyamine aminopropyltr 99.3 1.7E-12 5.7E-17 120.6 7.7 105 159-263 78-195 (314)
223 2b2c_A Spermidine synthase; be 99.3 9E-13 3.1E-17 122.1 5.5 104 159-263 109-222 (314)
224 1uwv_A 23S rRNA (uracil-5-)-me 99.3 4.9E-11 1.7E-15 115.7 17.3 118 135-263 268-389 (433)
225 1inl_A Spermidine synthase; be 99.3 2.3E-12 8E-17 118.6 7.5 105 159-263 91-205 (296)
226 2f8l_A Hypothetical protein LM 99.3 2.5E-11 8.5E-16 114.2 14.7 104 158-264 130-257 (344)
227 3m6w_A RRNA methylase; rRNA me 99.3 5.6E-12 1.9E-16 122.2 10.4 105 158-264 101-230 (464)
228 1iy9_A Spermidine synthase; ro 99.3 4.4E-12 1.5E-16 115.5 9.1 105 159-263 76-189 (275)
229 2h1r_A Dimethyladenosine trans 99.3 4E-12 1.4E-16 117.2 8.5 86 141-235 30-115 (299)
230 2b78_A Hypothetical protein SM 99.3 2.1E-12 7.3E-17 123.3 6.7 106 159-264 213-332 (385)
231 2pt6_A Spermidine synthase; tr 99.3 1.8E-12 6E-17 120.7 5.9 104 159-263 117-230 (321)
232 3c0k_A UPF0064 protein YCCW; P 99.3 4.5E-12 1.5E-16 121.6 8.7 106 159-264 221-340 (396)
233 3m4x_A NOL1/NOP2/SUN family pr 99.3 9E-12 3.1E-16 120.6 10.4 106 158-264 105-235 (456)
234 2yx1_A Hypothetical protein MJ 99.3 1.2E-11 4E-16 116.0 10.5 98 159-265 196-293 (336)
235 2frx_A Hypothetical protein YE 99.3 1.7E-11 5.8E-16 119.9 12.0 107 158-265 117-248 (479)
236 1sqg_A SUN protein, FMU protei 99.3 2.2E-11 7.6E-16 118.0 12.1 105 158-264 246-375 (429)
237 2i7c_A Spermidine synthase; tr 99.3 4E-12 1.4E-16 116.3 6.4 105 159-263 79-192 (283)
238 3v97_A Ribosomal RNA large sub 99.3 6.5E-12 2.2E-16 128.5 8.6 105 159-263 540-657 (703)
239 1mjf_A Spermidine synthase; sp 99.3 3.8E-12 1.3E-16 116.3 6.1 103 159-263 76-193 (281)
240 2as0_A Hypothetical protein PH 99.3 7.2E-12 2.5E-16 120.2 7.8 107 158-264 217-336 (396)
241 1wxx_A TT1595, hypothetical pr 99.2 3.9E-12 1.3E-16 121.4 5.2 104 159-264 210-326 (382)
242 4dmg_A Putative uncharacterize 99.2 1.9E-11 6.3E-16 116.7 9.6 104 158-264 214-327 (393)
243 1qam_A ERMC' methyltransferase 99.2 4.6E-12 1.6E-16 113.3 5.0 79 141-228 18-97 (244)
244 2cmg_A Spermidine synthase; tr 99.2 3.5E-12 1.2E-16 115.2 4.3 96 159-263 73-171 (262)
245 3b5i_A S-adenosyl-L-methionine 99.2 6.3E-10 2.2E-14 104.8 19.8 185 138-322 32-301 (374)
246 3lcv_B Sisomicin-gentamicin re 99.2 3.9E-11 1.3E-15 106.0 10.5 101 159-263 133-236 (281)
247 2xyq_A Putative 2'-O-methyl tr 99.2 4.4E-11 1.5E-15 109.0 10.6 114 157-317 62-195 (290)
248 3frh_A 16S rRNA methylase; met 99.2 5.2E-11 1.8E-15 104.2 10.3 100 158-263 105-206 (253)
249 2p41_A Type II methyltransfera 99.2 5.5E-12 1.9E-16 116.4 3.9 100 158-264 82-192 (305)
250 2jjq_A Uncharacterized RNA met 99.2 3.3E-10 1.1E-14 109.2 15.3 97 159-263 291-387 (425)
251 3gru_A Dimethyladenosine trans 99.2 1.5E-10 5.1E-15 105.9 11.4 87 140-235 37-123 (295)
252 1yub_A Ermam, rRNA methyltrans 99.2 1.9E-13 6.6E-18 122.5 -7.9 113 141-263 17-145 (245)
253 3k0b_A Predicted N6-adenine-sp 99.1 2.9E-10 9.8E-15 108.5 13.0 117 141-263 189-350 (393)
254 2efj_A 3,7-dimethylxanthine me 99.1 3.1E-09 1E-13 100.2 19.1 161 159-322 53-295 (384)
255 3ldg_A Putative uncharacterize 99.1 6.3E-10 2.1E-14 105.7 14.5 117 141-263 182-343 (384)
256 3ldu_A Putative methylase; str 99.1 5.6E-10 1.9E-14 106.3 12.9 117 141-263 183-344 (385)
257 2okc_A Type I restriction enzy 99.1 5.5E-10 1.9E-14 108.7 11.6 118 141-264 159-308 (445)
258 3tqs_A Ribosomal RNA small sub 99.1 5E-10 1.7E-14 100.5 9.8 82 141-232 17-102 (255)
259 3bt7_A TRNA (uracil-5-)-methyl 99.1 4.7E-10 1.6E-14 106.4 10.1 115 135-263 196-326 (369)
260 1m6e_X S-adenosyl-L-methionnin 99.0 4.9E-09 1.7E-13 98.0 14.8 162 158-319 51-280 (359)
261 2b9e_A NOL1/NOP2/SUN domain fa 99.0 3.7E-09 1.3E-13 97.5 13.9 105 158-264 102-235 (309)
262 2ih2_A Modification methylase 99.0 1.1E-09 3.9E-14 105.6 10.1 108 141-264 27-165 (421)
263 3fut_A Dimethyladenosine trans 99.0 7.6E-10 2.6E-14 100.0 8.1 89 140-240 34-123 (271)
264 3axs_A Probable N(2),N(2)-dime 99.0 1.1E-09 3.9E-14 103.9 8.1 101 159-263 53-158 (392)
265 1m6y_A S-adenosyl-methyltransf 98.9 9.1E-10 3.1E-14 101.1 7.0 88 141-235 14-107 (301)
266 2qfm_A Spermine synthase; sper 98.9 8E-10 2.7E-14 102.9 6.6 106 158-263 188-314 (364)
267 2dul_A N(2),N(2)-dimethylguano 98.9 1.2E-09 4.3E-14 103.5 7.3 100 159-263 48-164 (378)
268 3cvo_A Methyltransferase-like 98.9 4.4E-08 1.5E-12 84.1 16.1 98 159-263 31-154 (202)
269 4gqb_A Protein arginine N-meth 98.9 1.5E-08 5.2E-13 101.2 14.0 101 158-260 357-464 (637)
270 2r6z_A UPF0341 protein in RSP 98.9 2.9E-10 1E-14 102.2 0.9 79 159-238 84-173 (258)
271 3uzu_A Ribosomal RNA small sub 98.9 6.5E-09 2.2E-13 94.4 9.1 72 141-223 30-105 (279)
272 3v97_A Ribosomal RNA large sub 98.8 1.7E-08 5.7E-13 103.3 12.9 118 141-263 178-347 (703)
273 3ftd_A Dimethyladenosine trans 98.8 1.8E-08 6E-13 90.1 11.1 100 140-251 18-117 (249)
274 3ll7_A Putative methyltransfer 98.8 3.5E-09 1.2E-13 100.8 4.9 73 159-233 94-170 (410)
275 2ar0_A M.ecoki, type I restric 98.8 2.2E-08 7.4E-13 99.5 10.1 107 158-264 169-313 (541)
276 2qy6_A UPF0209 protein YFCK; s 98.7 9.7E-09 3.3E-13 92.1 6.1 129 158-320 60-236 (257)
277 2oyr_A UPF0341 protein YHIQ; a 98.7 6.9E-09 2.4E-13 92.9 4.7 96 160-257 90-194 (258)
278 3ua3_A Protein arginine N-meth 98.7 3.1E-08 1.1E-12 98.9 9.7 100 159-260 410-531 (745)
279 1qyr_A KSGA, high level kasuga 98.7 1.2E-08 4.1E-13 91.3 4.7 72 141-223 9-82 (252)
280 3evf_A RNA-directed RNA polyme 98.6 5.7E-08 1.9E-12 86.4 8.2 115 141-264 62-185 (277)
281 3o4f_A Spermidine synthase; am 98.6 1.2E-07 4.1E-12 86.0 10.4 105 159-263 84-198 (294)
282 3khk_A Type I restriction-modi 98.6 1.2E-07 4E-12 94.1 9.8 104 160-263 246-395 (544)
283 3lkd_A Type I restriction-modi 98.6 5.2E-07 1.8E-11 89.3 14.3 107 158-264 221-359 (542)
284 4auk_A Ribosomal RNA large sub 98.5 1.2E-06 4.2E-11 81.4 12.3 94 157-263 210-306 (375)
285 2wk1_A NOVP; transferase, O-me 98.5 4.6E-07 1.6E-11 81.9 8.9 104 159-264 107-245 (282)
286 1wg8_A Predicted S-adenosylmet 98.4 7.5E-07 2.6E-11 79.7 7.8 84 141-235 10-98 (285)
287 3gcz_A Polyprotein; flavivirus 98.4 2.2E-07 7.7E-12 82.7 4.1 115 141-264 78-202 (282)
288 3s1s_A Restriction endonucleas 98.2 7.2E-06 2.5E-10 83.3 10.7 106 158-264 321-466 (878)
289 3eld_A Methyltransferase; flav 98.2 3.5E-06 1.2E-10 75.5 7.5 116 141-265 69-193 (300)
290 2k4m_A TR8_protein, UPF0146 pr 98.2 1.1E-06 3.6E-11 70.4 3.5 87 159-266 36-124 (153)
291 4fzv_A Putative methyltransfer 98.1 5.7E-06 2E-10 77.4 8.5 108 158-265 148-286 (359)
292 3lkz_A Non-structural protein 98.1 1.3E-05 4.4E-10 71.4 8.8 115 141-265 82-206 (321)
293 3c6k_A Spermine synthase; sper 98.1 4E-06 1.4E-10 78.3 5.8 106 158-263 205-331 (381)
294 1rjd_A PPM1P, carboxy methyl t 98.0 0.0001 3.4E-09 68.4 13.9 150 159-312 98-281 (334)
295 3p8z_A Mtase, non-structural p 97.9 8.6E-05 2.9E-09 64.0 11.6 114 141-265 66-188 (267)
296 2zig_A TTHA0409, putative modi 97.9 5.2E-05 1.8E-09 69.3 9.8 58 140-204 223-280 (297)
297 3ufb_A Type I restriction-modi 97.9 0.00023 7.8E-09 70.3 14.6 118 141-264 205-363 (530)
298 2px2_A Genome polyprotein [con 97.8 3.5E-05 1.2E-09 67.5 7.5 110 141-265 61-185 (269)
299 2vz8_A Fatty acid synthase; tr 97.8 2.9E-06 1E-10 97.7 0.4 146 158-316 1240-1392(2512)
300 2uyo_A Hypothetical protein ML 97.6 0.00074 2.5E-08 61.9 12.9 147 160-314 104-274 (310)
301 3tka_A Ribosomal RNA small sub 97.5 9.4E-05 3.2E-09 67.7 5.3 87 141-237 45-139 (347)
302 3vyw_A MNMC2; tRNA wobble urid 97.3 0.00081 2.8E-08 61.0 9.0 127 159-320 97-249 (308)
303 1i4w_A Mitochondrial replicati 97.2 0.001 3.4E-08 62.0 9.1 77 140-220 39-117 (353)
304 1g60_A Adenine-specific methyl 97.2 0.00082 2.8E-08 60.0 8.2 59 140-205 200-258 (260)
305 3iei_A Leucine carboxyl methyl 97.2 0.027 9.1E-07 52.0 18.0 154 159-319 91-281 (334)
306 3r24_A NSP16, 2'-O-methyl tran 97.2 0.0019 6.5E-08 57.5 9.6 92 157-264 108-218 (344)
307 2dph_A Formaldehyde dismutase; 96.5 0.013 4.4E-07 55.5 10.3 98 158-263 185-299 (398)
308 1kol_A Formaldehyde dehydrogen 96.4 0.023 7.7E-07 53.8 11.4 99 158-264 185-301 (398)
309 1f8f_A Benzyl alcohol dehydrog 96.2 0.024 8.4E-07 53.0 10.4 94 158-264 190-290 (371)
310 1pqw_A Polyketide synthase; ro 96.0 0.023 8E-07 47.9 8.3 90 158-263 38-137 (198)
311 3two_A Mannitol dehydrogenase; 95.6 0.05 1.7E-06 50.4 9.6 90 158-264 176-266 (348)
312 2oo3_A Protein involved in cat 95.6 0.0054 1.8E-07 54.8 2.7 101 159-263 92-198 (283)
313 3pvc_A TRNA 5-methylaminomethy 95.6 0.03 1E-06 57.0 8.7 126 159-318 59-232 (689)
314 3tos_A CALS11; methyltransfera 95.6 0.064 2.2E-06 47.4 9.6 105 159-265 70-219 (257)
315 1e3j_A NADP(H)-dependent ketos 95.5 0.13 4.5E-06 47.6 12.2 94 158-264 168-272 (352)
316 4ej6_A Putative zinc-binding d 95.5 0.11 3.9E-06 48.5 11.8 94 158-264 182-285 (370)
317 3s2e_A Zinc-containing alcohol 95.5 0.04 1.4E-06 50.8 8.6 92 158-264 166-264 (340)
318 3ps9_A TRNA 5-methylaminomethy 95.4 0.043 1.5E-06 55.8 9.1 126 159-318 67-240 (676)
319 3m6i_A L-arabinitol 4-dehydrog 95.4 0.11 3.7E-06 48.4 11.2 96 158-264 179-284 (363)
320 1pl8_A Human sorbitol dehydrog 95.4 0.14 4.9E-06 47.4 11.9 94 158-264 171-274 (356)
321 3fpc_A NADP-dependent alcohol 95.2 0.069 2.4E-06 49.5 9.1 94 158-264 166-267 (352)
322 2py6_A Methyltransferase FKBM; 95.0 0.072 2.5E-06 50.6 8.7 63 157-219 225-293 (409)
323 3uog_A Alcohol dehydrogenase; 95.0 0.058 2E-06 50.3 7.9 94 157-264 188-288 (363)
324 1v3u_A Leukotriene B4 12- hydr 94.9 0.097 3.3E-06 48.0 9.2 90 158-263 145-244 (333)
325 3qv2_A 5-cytosine DNA methyltr 94.8 0.11 3.9E-06 47.6 9.2 97 159-263 10-129 (327)
326 3g7u_A Cytosine-specific methy 94.8 0.07 2.4E-06 50.1 7.9 69 160-235 3-80 (376)
327 1uuf_A YAHK, zinc-type alcohol 94.8 0.06 2.1E-06 50.4 7.4 92 158-263 194-288 (369)
328 1boo_A Protein (N-4 cytosine-s 94.7 0.048 1.6E-06 50.1 6.4 58 141-205 241-298 (323)
329 4b7c_A Probable oxidoreductase 94.7 0.08 2.7E-06 48.6 7.9 94 158-264 149-249 (336)
330 1eg2_A Modification methylase 94.6 0.064 2.2E-06 49.1 7.0 59 140-205 230-291 (319)
331 3fwz_A Inner membrane protein 94.6 0.73 2.5E-05 36.2 12.4 90 159-263 7-105 (140)
332 1g55_A DNA cytosine methyltran 94.5 0.027 9.1E-07 52.3 4.3 70 159-235 2-77 (343)
333 1rjw_A ADH-HT, alcohol dehydro 94.4 0.21 7.3E-06 45.9 10.3 91 158-263 164-261 (339)
334 3ip1_A Alcohol dehydrogenase, 94.4 0.4 1.4E-05 45.3 12.2 96 157-264 212-319 (404)
335 1cdo_A Alcohol dehydrogenase; 94.2 0.2 6.9E-06 46.7 9.7 92 158-264 192-295 (374)
336 3goh_A Alcohol dehydrogenase, 94.1 0.053 1.8E-06 49.4 5.3 88 157-263 141-229 (315)
337 4dvj_A Putative zinc-dependent 94.1 0.4 1.4E-05 44.5 11.5 90 158-262 171-269 (363)
338 3gms_A Putative NADPH:quinone 94.1 0.14 4.7E-06 47.2 8.2 93 158-264 144-244 (340)
339 2h6e_A ADH-4, D-arabinose 1-de 94.1 0.023 8E-07 52.6 2.9 92 159-264 171-270 (344)
340 2fzw_A Alcohol dehydrogenase c 94.1 0.25 8.6E-06 46.0 10.0 92 158-264 190-293 (373)
341 2jhf_A Alcohol dehydrogenase E 94.0 0.24 8.2E-06 46.2 9.8 91 158-263 191-293 (374)
342 3qwb_A Probable quinone oxidor 94.0 0.14 4.8E-06 46.9 8.0 94 157-264 147-248 (334)
343 2j3h_A NADP-dependent oxidored 94.0 0.24 8.3E-06 45.5 9.6 92 158-264 155-256 (345)
344 1p0f_A NADP-dependent alcohol 93.9 0.24 8.3E-06 46.2 9.6 94 158-264 191-294 (373)
345 3jyn_A Quinone oxidoreductase; 93.9 0.21 7.2E-06 45.6 8.9 94 157-264 139-240 (325)
346 2d8a_A PH0655, probable L-thre 93.9 0.2 6.9E-06 46.2 8.8 92 158-264 167-268 (348)
347 2zwa_A Leucine carboxyl methyl 93.8 1.3 4.3E-05 45.0 15.4 174 137-320 91-310 (695)
348 1e3i_A Alcohol dehydrogenase, 93.8 0.27 9.2E-06 45.9 9.7 92 158-264 195-298 (376)
349 2c0c_A Zinc binding alcohol de 93.8 0.31 1.1E-05 45.3 10.1 93 158-264 163-262 (362)
350 1jvb_A NAD(H)-dependent alcoho 93.7 0.19 6.5E-06 46.4 8.4 92 158-264 170-272 (347)
351 4eye_A Probable oxidoreductase 93.6 0.17 5.7E-06 46.7 7.7 93 157-264 158-258 (342)
352 2eih_A Alcohol dehydrogenase; 93.6 0.35 1.2E-05 44.5 9.9 92 157-264 165-266 (343)
353 1qor_A Quinone oxidoreductase; 93.5 0.2 6.8E-06 45.8 8.1 91 158-264 140-240 (327)
354 3uko_A Alcohol dehydrogenase c 93.4 0.063 2.1E-06 50.3 4.5 94 158-264 193-296 (378)
355 2hcy_A Alcohol dehydrogenase 1 93.4 0.19 6.4E-06 46.4 7.7 92 158-264 169-270 (347)
356 1zkd_A DUF185; NESG, RPR58, st 93.3 0.67 2.3E-05 43.4 11.3 43 159-201 81-131 (387)
357 3jv7_A ADH-A; dehydrogenase, n 93.3 0.17 5.8E-06 46.6 7.2 93 158-264 171-271 (345)
358 2b5w_A Glucose dehydrogenase; 93.2 0.16 5.4E-06 47.2 6.9 89 160-264 174-274 (357)
359 1yb5_A Quinone oxidoreductase; 93.1 0.27 9.2E-06 45.5 8.3 90 158-263 170-269 (351)
360 2zb4_A Prostaglandin reductase 93.1 0.46 1.6E-05 43.9 10.0 92 158-264 158-261 (357)
361 3fbg_A Putative arginate lyase 93.1 0.35 1.2E-05 44.6 9.0 90 158-262 150-247 (346)
362 2j8z_A Quinone oxidoreductase; 93.0 0.34 1.2E-05 44.8 8.8 92 157-264 161-262 (354)
363 1vj0_A Alcohol dehydrogenase, 93.0 0.28 9.5E-06 45.9 8.2 95 157-264 194-299 (380)
364 2zig_A TTHA0409, putative modi 92.9 0.17 5.9E-06 45.7 6.5 56 208-263 20-97 (297)
365 3llv_A Exopolyphosphatase-rela 92.5 0.99 3.4E-05 35.2 9.9 90 159-262 6-102 (141)
366 4dup_A Quinone oxidoreductase; 92.5 0.29 1E-05 45.2 7.6 94 157-264 166-266 (353)
367 3krt_A Crotonyl COA reductase; 92.5 0.74 2.5E-05 44.2 10.7 93 157-263 227-344 (456)
368 4a2c_A Galactitol-1-phosphate 92.5 0.66 2.3E-05 42.5 10.0 94 158-264 160-261 (346)
369 2cdc_A Glucose dehydrogenase g 92.4 0.28 9.6E-06 45.6 7.5 88 159-264 181-279 (366)
370 1wly_A CAAR, 2-haloacrylate re 92.4 0.41 1.4E-05 43.7 8.5 91 158-264 145-245 (333)
371 2dq4_A L-threonine 3-dehydroge 92.4 0.016 5.5E-07 53.6 -1.2 91 158-264 164-263 (343)
372 1piw_A Hypothetical zinc-type 92.2 0.059 2E-06 50.1 2.5 95 158-264 179-277 (360)
373 2c7p_A Modification methylase 92.0 0.42 1.4E-05 43.8 7.9 66 159-233 11-78 (327)
374 3nx4_A Putative oxidoreductase 91.8 0.2 6.7E-06 45.7 5.4 91 161-264 149-242 (324)
375 3tqh_A Quinone oxidoreductase; 91.7 0.92 3.1E-05 41.2 9.9 90 158-262 152-244 (321)
376 4eez_A Alcohol dehydrogenase 1 91.6 0.5 1.7E-05 43.4 8.1 93 158-263 163-263 (348)
377 1xg5_A ARPG836; short chain de 91.6 3.1 0.00011 36.6 13.1 78 159-237 32-122 (279)
378 3gaz_A Alcohol dehydrogenase s 91.5 0.43 1.5E-05 43.9 7.4 90 157-263 149-246 (343)
379 2cf5_A Atccad5, CAD, cinnamyl 91.4 0.24 8.1E-06 45.9 5.6 94 158-264 180-276 (357)
380 1yqd_A Sinapyl alcohol dehydro 91.3 0.29 1E-05 45.5 6.2 93 158-264 187-283 (366)
381 3ius_A Uncharacterized conserv 91.2 2.9 0.0001 36.7 12.5 71 159-241 5-78 (286)
382 1pjc_A Protein (L-alanine dehy 91.1 0.13 4.3E-06 48.0 3.4 101 158-263 166-267 (361)
383 3c85_A Putative glutathione-re 91.0 1.1 3.8E-05 36.8 8.9 92 159-263 39-139 (183)
384 3ioy_A Short-chain dehydrogena 90.9 1.6 5.4E-05 39.6 10.6 79 159-238 8-99 (319)
385 4h0n_A DNMT2; SAH binding, tra 90.9 0.28 9.6E-06 45.1 5.5 69 159-234 3-77 (333)
386 1iz0_A Quinone oxidoreductase; 90.6 0.064 2.2E-06 48.5 0.9 91 158-263 125-218 (302)
387 4a0s_A Octenoyl-COA reductase/ 90.5 1 3.5E-05 42.9 9.4 96 157-263 219-336 (447)
388 1xa0_A Putative NADPH dependen 90.5 0.29 9.9E-06 44.6 5.3 93 159-264 149-247 (328)
389 2gdz_A NAD+-dependent 15-hydro 90.4 1.9 6.5E-05 37.7 10.4 104 159-263 7-139 (267)
390 3grk_A Enoyl-(acyl-carrier-pro 90.3 2.6 8.8E-05 37.6 11.3 103 159-264 31-170 (293)
391 2vhw_A Alanine dehydrogenase; 90.2 0.13 4.6E-06 48.2 2.7 101 158-263 167-268 (377)
392 3ce6_A Adenosylhomocysteinase; 89.6 1.3 4.4E-05 42.9 9.1 88 158-263 273-361 (494)
393 4f3n_A Uncharacterized ACR, CO 89.6 1.5 5.3E-05 41.5 9.4 45 159-203 138-188 (432)
394 2qrv_A DNA (cytosine-5)-methyl 89.5 0.53 1.8E-05 42.4 6.0 69 158-233 15-90 (295)
395 3oig_A Enoyl-[acyl-carrier-pro 89.3 1.9 6.5E-05 37.6 9.6 105 159-264 7-148 (266)
396 3pxx_A Carveol dehydrogenase; 89.1 3.7 0.00013 36.1 11.4 102 159-263 10-153 (287)
397 1lss_A TRK system potassium up 89.0 5.3 0.00018 30.5 11.1 90 159-261 4-100 (140)
398 4dio_A NAD(P) transhydrogenase 89.0 0.57 1.9E-05 44.1 5.9 98 158-263 189-312 (405)
399 2eez_A Alanine dehydrogenase; 88.9 0.2 7E-06 46.7 2.9 101 158-263 165-266 (369)
400 1tt7_A YHFP; alcohol dehydroge 88.8 0.28 9.5E-06 44.8 3.7 92 159-264 150-248 (330)
401 3p2y_A Alanine dehydrogenase/p 88.7 0.17 5.9E-06 47.3 2.2 97 158-262 183-301 (381)
402 3ek2_A Enoyl-(acyl-carrier-pro 88.4 1.7 6E-05 37.9 8.6 103 158-263 13-153 (271)
403 3ijr_A Oxidoreductase, short c 88.3 3.8 0.00013 36.4 10.9 102 159-263 47-182 (291)
404 3e8x_A Putative NAD-dependent 88.2 2.9 0.0001 35.6 9.8 75 159-242 21-100 (236)
405 3l9w_A Glutathione-regulated p 87.9 1.9 6.5E-05 40.7 8.9 90 159-263 4-102 (413)
406 4eso_A Putative oxidoreductase 87.8 2.2 7.6E-05 37.1 8.9 99 159-263 8-138 (255)
407 3v2g_A 3-oxoacyl-[acyl-carrier 87.7 5.7 0.0002 34.8 11.6 103 159-264 31-166 (271)
408 3r3s_A Oxidoreductase; structu 87.3 4.1 0.00014 36.2 10.5 103 159-264 49-186 (294)
409 2vn8_A Reticulon-4-interacting 87.2 0.3 1E-05 45.6 2.9 94 157-263 182-280 (375)
410 3k31_A Enoyl-(acyl-carrier-pro 86.8 2 6.7E-05 38.4 8.1 103 159-264 30-169 (296)
411 4g81_D Putative hexonate dehyd 86.8 4.2 0.00014 35.6 9.9 78 159-239 9-99 (255)
412 3t7c_A Carveol dehydrogenase; 86.6 6.6 0.00023 34.9 11.5 76 159-237 28-128 (299)
413 1wma_A Carbonyl reductase [NAD 86.5 1.9 6.4E-05 37.6 7.6 102 159-263 4-138 (276)
414 3gqv_A Enoyl reductase; medium 86.4 2.2 7.6E-05 39.5 8.4 93 157-263 163-263 (371)
415 4dcm_A Ribosomal RNA large sub 86.4 2.9 9.8E-05 38.9 9.2 97 159-263 39-136 (375)
416 1l7d_A Nicotinamide nucleotide 86.2 0.38 1.3E-05 45.1 3.0 42 158-199 171-213 (384)
417 3o26_A Salutaridine reductase; 86.2 5 0.00017 35.6 10.5 77 159-237 12-102 (311)
418 3sx2_A Putative 3-ketoacyl-(ac 85.4 5 0.00017 35.1 10.0 78 159-239 13-115 (278)
419 3is3_A 17BETA-hydroxysteroid d 85.1 10 0.00035 33.0 11.8 103 159-264 18-153 (270)
420 1x13_A NAD(P) transhydrogenase 85.0 0.33 1.1E-05 45.8 2.0 41 158-198 171-212 (401)
421 4fn4_A Short chain dehydrogena 84.9 4.3 0.00015 35.5 9.0 75 159-236 7-94 (254)
422 1id1_A Putative potassium chan 84.8 6.4 0.00022 31.0 9.4 94 159-262 3-104 (153)
423 1y1p_A ARII, aldehyde reductas 84.3 16 0.00053 32.6 13.0 79 158-238 10-95 (342)
424 2g1u_A Hypothetical protein TM 84.2 2.9 9.9E-05 33.2 7.1 93 158-262 18-117 (155)
425 3pi7_A NADH oxidoreductase; gr 84.0 1.6 5.4E-05 40.1 6.1 91 160-264 166-264 (349)
426 1boo_A Protein (N-4 cytosine-s 84.0 0.68 2.3E-05 42.3 3.5 56 208-263 13-84 (323)
427 1gu7_A Enoyl-[acyl-carrier-pro 83.9 0.9 3.1E-05 42.0 4.4 96 158-263 166-275 (364)
428 3ubt_Y Modification methylase 83.9 1.5 5.2E-05 39.8 5.9 66 160-233 1-68 (331)
429 3f9i_A 3-oxoacyl-[acyl-carrier 83.8 11 0.00038 32.2 11.3 74 158-237 13-95 (249)
430 4fgs_A Probable dehydrogenase 83.4 2 6.9E-05 38.1 6.3 99 159-263 29-159 (273)
431 3gvp_A Adenosylhomocysteinase 83.3 8.5 0.00029 36.4 10.7 102 140-263 205-307 (435)
432 1zsy_A Mitochondrial 2-enoyl t 83.0 2.5 8.7E-05 38.8 7.1 92 158-263 167-270 (357)
433 3h2s_A Putative NADH-flavin re 82.7 7.6 0.00026 32.4 9.6 93 161-262 2-103 (224)
434 3edm_A Short chain dehydrogena 82.6 2.5 8.4E-05 36.9 6.6 102 159-263 8-143 (259)
435 3l4b_C TRKA K+ channel protien 81.8 4.5 0.00016 34.1 7.8 89 161-261 2-97 (218)
436 4imr_A 3-oxoacyl-(acyl-carrier 81.8 5.5 0.00019 35.0 8.6 76 159-237 33-120 (275)
437 1xhl_A Short-chain dehydrogena 81.8 11 0.00038 33.4 10.8 77 159-236 26-116 (297)
438 3u5t_A 3-oxoacyl-[acyl-carrier 81.5 5.1 0.00017 35.1 8.3 102 159-263 27-161 (267)
439 3qiv_A Short-chain dehydrogena 81.2 7.5 0.00026 33.4 9.2 75 159-236 9-96 (253)
440 3ew7_A LMO0794 protein; Q8Y8U8 81.1 13 0.00046 30.7 10.5 93 161-263 2-102 (221)
441 3d4o_A Dipicolinate synthase s 81.0 5.4 0.00019 35.5 8.3 88 158-262 154-243 (293)
442 3n58_A Adenosylhomocysteinase; 80.3 9.8 0.00034 36.2 9.9 103 139-263 231-334 (464)
443 1yb1_A 17-beta-hydroxysteroid 80.3 9.1 0.00031 33.3 9.5 76 159-237 31-119 (272)
444 1g60_A Adenine-specific methyl 79.6 1.4 4.9E-05 38.6 3.9 21 243-263 54-74 (260)
445 3ucx_A Short chain dehydrogena 79.5 10 0.00034 32.9 9.5 75 159-236 11-98 (264)
446 3awd_A GOX2181, putative polyo 79.4 10 0.00035 32.5 9.5 76 159-237 13-101 (260)
447 1g0o_A Trihydroxynaphthalene r 79.2 11 0.00039 32.9 9.8 103 159-264 29-164 (283)
448 3nzo_A UDP-N-acetylglucosamine 78.9 5.6 0.00019 37.1 8.0 80 159-239 35-125 (399)
449 1qsg_A Enoyl-[acyl-carrier-pro 78.8 9.8 0.00034 33.0 9.2 76 159-237 9-98 (265)
450 3iht_A S-adenosyl-L-methionine 78.5 6.5 0.00022 31.5 6.8 114 136-264 24-148 (174)
451 3tjr_A Short chain dehydrogena 78.3 11 0.00038 33.4 9.6 76 159-237 31-119 (301)
452 2km1_A Protein DRE2; yeast, an 78.2 1.7 5.8E-05 34.0 3.4 71 190-261 21-96 (136)
453 2rir_A Dipicolinate synthase, 78.2 6.6 0.00022 35.1 8.0 88 158-262 156-245 (300)
454 1fmc_A 7 alpha-hydroxysteroid 78.0 9.8 0.00033 32.5 8.9 76 159-237 11-99 (255)
455 3sju_A Keto reductase; short-c 77.3 10 0.00036 33.2 9.0 77 159-238 24-113 (279)
456 3gvc_A Oxidoreductase, probabl 76.9 20 0.00067 31.4 10.7 74 159-238 29-115 (277)
457 3ggo_A Prephenate dehydrogenas 76.5 15 0.00051 33.1 9.9 88 159-260 33-125 (314)
458 2jah_A Clavulanic acid dehydro 76.5 15 0.0005 31.5 9.5 76 159-237 7-95 (247)
459 3ojo_A CAP5O; rossmann fold, c 76.2 11 0.00037 35.7 9.1 94 159-261 11-127 (431)
460 3ond_A Adenosylhomocysteinase; 76.0 35 0.0012 32.8 12.6 99 140-262 250-351 (488)
461 3h9u_A Adenosylhomocysteinase; 76.0 11 0.00038 35.6 9.0 101 140-262 196-297 (436)
462 1e7w_A Pteridine reductase; di 75.9 40 0.0014 29.5 13.4 60 159-221 9-73 (291)
463 3i6i_A Putative leucoanthocyan 75.9 6.6 0.00022 35.6 7.4 87 159-251 10-108 (346)
464 3nyw_A Putative oxidoreductase 75.9 14 0.00047 31.8 9.2 78 159-237 7-98 (250)
465 1iy8_A Levodione reductase; ox 75.7 15 0.00052 31.7 9.5 78 159-237 13-103 (267)
466 2pd4_A Enoyl-[acyl-carrier-pro 75.5 6.1 0.00021 34.6 6.9 76 159-237 6-95 (275)
467 2hmt_A YUAA protein; RCK, KTN, 75.2 15 0.0005 28.0 8.4 91 159-262 6-103 (144)
468 3h7a_A Short chain dehydrogena 75.0 8.3 0.00028 33.3 7.5 77 159-238 7-95 (252)
469 3o38_A Short chain dehydrogena 74.9 13 0.00044 32.2 8.8 78 159-238 22-113 (266)
470 3me5_A Cytosine-specific methy 74.7 4.7 0.00016 38.8 6.2 58 159-220 88-146 (482)
471 2x9g_A PTR1, pteridine reducta 74.7 26 0.0009 30.6 11.0 75 159-236 23-116 (288)
472 3rku_A Oxidoreductase YMR226C; 74.6 14 0.00047 32.7 9.0 78 159-237 33-126 (287)
473 2rhc_B Actinorhodin polyketide 74.5 17 0.00057 31.8 9.5 76 159-237 22-110 (277)
474 1h2b_A Alcohol dehydrogenase; 74.5 7.4 0.00025 35.7 7.4 93 158-264 186-286 (359)
475 1ae1_A Tropinone reductase-I; 74.5 17 0.00058 31.6 9.5 76 159-237 21-110 (273)
476 1zcj_A Peroxisomal bifunctiona 74.4 21 0.00073 34.0 10.8 96 159-261 37-148 (463)
477 2p91_A Enoyl-[acyl-carrier-pro 74.0 19 0.00065 31.5 9.8 76 159-237 21-110 (285)
478 3ic5_A Putative saccharopine d 73.6 11 0.00039 27.5 7.2 66 159-234 5-77 (118)
479 2ae2_A Protein (tropinone redu 73.3 14 0.00048 31.8 8.6 76 159-237 9-98 (260)
480 3svt_A Short-chain type dehydr 73.2 16 0.00054 31.9 9.1 77 159-236 11-101 (281)
481 3guy_A Short-chain dehydrogena 73.0 24 0.00082 29.6 9.9 71 161-237 3-83 (230)
482 4hp8_A 2-deoxy-D-gluconate 3-d 72.7 40 0.0014 29.1 11.2 75 159-238 9-91 (247)
483 3cxt_A Dehydrogenase with diff 72.6 18 0.00062 31.9 9.3 76 159-237 34-122 (291)
484 4f6c_A AUSA reductase domain p 72.5 24 0.00084 32.8 10.7 79 159-238 69-162 (427)
485 1zem_A Xylitol dehydrogenase; 72.5 18 0.00061 31.2 9.1 76 159-237 7-95 (262)
486 3l77_A Short-chain alcohol deh 72.3 28 0.00094 29.2 10.2 77 159-238 2-92 (235)
487 3nrc_A Enoyl-[acyl-carrier-pro 72.1 24 0.0008 30.8 9.9 76 159-238 26-115 (280)
488 1ja9_A 4HNR, 1,3,6,8-tetrahydr 72.0 20 0.00069 30.8 9.4 76 159-237 21-110 (274)
489 1yxm_A Pecra, peroxisomal tran 71.8 20 0.0007 31.5 9.5 77 159-236 18-110 (303)
490 3swr_A DNA (cytosine-5)-methyl 71.6 7.2 0.00024 41.1 7.1 71 157-234 538-626 (1002)
491 3rkr_A Short chain oxidoreduct 71.4 17 0.00057 31.4 8.7 75 159-236 29-116 (262)
492 2c07_A 3-oxoacyl-(acyl-carrier 70.9 29 0.001 30.2 10.3 76 159-237 44-132 (285)
493 2aef_A Calcium-gated potassium 70.8 20 0.00068 30.3 8.9 88 159-263 9-105 (234)
494 1w6u_A 2,4-dienoyl-COA reducta 70.7 20 0.00067 31.5 9.2 76 159-237 26-115 (302)
495 1xu9_A Corticosteroid 11-beta- 70.6 18 0.00063 31.6 8.9 73 159-233 28-113 (286)
496 3gaf_A 7-alpha-hydroxysteroid 70.5 20 0.00069 30.8 9.0 76 159-237 12-100 (256)
497 1cyd_A Carbonyl reductase; sho 70.3 21 0.00073 30.0 9.0 72 159-237 7-87 (244)
498 3lyl_A 3-oxoacyl-(acyl-carrier 70.2 21 0.00073 30.2 9.0 76 159-237 5-93 (247)
499 1mxh_A Pteridine reductase 2; 69.9 21 0.00072 30.9 9.1 76 159-237 11-105 (276)
500 3ruf_A WBGU; rossmann fold, UD 69.9 8.7 0.0003 34.7 6.7 78 159-237 25-111 (351)
No 1
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=100.00 E-value=4.8e-32 Score=248.09 Aligned_cols=266 Identities=26% Similarity=0.409 Sum_probs=189.9
Q ss_pred HHHHHHhccchhhHHHhhcccccccccCCCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHH
Q 016921 97 EGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYL 176 (380)
Q Consensus 97 ~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l 176 (380)
++++++||..++.|+.++++.+|++||...... ......+.++++.+++.+.+.+ +.+|||||||+|.++..+
T Consensus 7 ~~~~~~Yd~~~~~y~~~~~~~~~~~y~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l 79 (273)
T 3bus_A 7 EEVRQMYDDFTDPFARIWGENLHFGYWEDAGAD--VSVDDATDRLTDEMIALLDVRS-----GDRVLDVGCGIGKPAVRL 79 (273)
T ss_dssp ----------------CCGGGCCCCCCCCSSCC--CCHHHHHHHHHHHHHHHSCCCT-----TCEEEEESCTTSHHHHHH
T ss_pred HHHHHHHcchHHHHHHHcCCCceEEecCCCccc--cCHHHHHHHHHHHHHHhcCCCC-----CCEEEEeCCCCCHHHHHH
Confidence 458899999999999999999999999765421 2367778888899999887654 899999999999999999
Q ss_pred HHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCC
Q 016921 177 AKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPA 256 (380)
Q Consensus 177 ~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg 256 (380)
++..+.+|+|+|+|+.+++.+++++...++.+++.++++|+.++++++++||+|++..+++|++++..+++++.++||||
T Consensus 80 ~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg 159 (273)
T 3bus_A 80 ATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPG 159 (273)
T ss_dssp HHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE
T ss_pred HHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC
Confidence 98778899999999999999999999888878899999999999988899999999999999999999999999999999
Q ss_pred cEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEecCCCcCCchHHHHHhhhh
Q 016921 257 GTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVAPFWPAVIHSALT 336 (380)
Q Consensus 257 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~~~~~~~~~~~~~ 336 (380)
|++++.++...... .......+..+........+++.+++.++|+++||++++++.+..+...++..+......
T Consensus 160 G~l~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (273)
T 3bus_A 160 GTVAIADFVLLAPV------EGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDISAQARPSLVKTAEAFEN 233 (273)
T ss_dssp EEEEEEEEEESSCC------CHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEECHHHHTTHHHHHHHHHHH
T ss_pred eEEEEEEeeccCCC------ChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEECcHhHHHHHHHHHHHHHH
Confidence 99999987643311 111112222222223334467999999999999999999998887766555544433221
Q ss_pred h-hhhHHHHhhchhhhhhhhhHHHHHHHHhcCceEEEEEEEecC
Q 016921 337 W-KGFTSLLRTGLKTIKGALAMPLMIEGYQKNLIKFAIITCRKP 379 (380)
Q Consensus 337 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~arKP 379 (380)
. ..+. ..............+...+..+.++|++++||||
T Consensus 234 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 273 (273)
T 3bus_A 234 ARSQVE----PFMGAEGLDRMIATFRGLAEVPEAGYVLIGARKP 273 (273)
T ss_dssp THHHHH----HHHCHHHHHHHHHHHHHHHTCTTEEEEEEEEECC
T ss_pred hHHHHH----hhcCHHHHHHHHHHHHHHhhCCCeeEEEEEEECC
Confidence 1 1111 1111111222233344445778999999999998
No 2
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=100.00 E-value=1.1e-31 Score=248.91 Aligned_cols=270 Identities=24% Similarity=0.398 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHhccc--hhhHHHhhc-ccccccccCCCCCCCcccHHHHHHHHHHHHHHHc----CCCCCCCCCCCEEEE
Q 016921 92 ARELKEGIAEFYDES--SSLWEDIWG-DHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFA----GVSEDPTKRPKNVVD 164 (380)
Q Consensus 92 ~~~~~~~i~~~yd~~--~~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~----~~~~~~~~~~~~vLD 164 (380)
.....+.+.++||.. .++|+.+|+ +++|++||..... .......+.+.++.++..+ .+.+ +.+|||
T Consensus 16 ~~~~~~~~~~~Yd~~~~~~~y~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~-----~~~vLD 88 (297)
T 2o57_A 16 SKTVKDNAEIYYDDDDSDRFYFHVWGGEDIHVGLYKEPVD--QDEIREASLRTDEWLASELAMTGVLQR-----QAKGLD 88 (297)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCSCCCCSSGG--GSCHHHHHHHHHHHHHHHHHHTTCCCT-----TCEEEE
T ss_pred HHHHHHHHHHHcCCccchhHHHHHhCCCceEEEecCCCCC--CcchHHHHHHHHHHHHHHhhhccCCCC-----CCEEEE
Confidence 455667899999997 489988885 7889999976410 1126677788888888877 5544 889999
Q ss_pred ECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCCCCHHH
Q 016921 165 VGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKSK 244 (380)
Q Consensus 165 iGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~ 244 (380)
||||+|.++..+++..+.+|+|+|+|+.+++.|+++....++.+++.++++|+.++|+++++||+|++..+++|++++..
T Consensus 89 iGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 168 (297)
T 2o57_A 89 LGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLK 168 (297)
T ss_dssp ETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHH
T ss_pred eCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHH
Confidence 99999999999999778899999999999999999998888888999999999999988899999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEecCCCcC
Q 016921 245 FVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVA 324 (380)
Q Consensus 245 ~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~ 324 (380)
+++++.++|||||++++.++......+. .. .... ......+.+.+.+++.++|+++||+++++..+...+.
T Consensus 169 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~----~~~~----~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~ 239 (297)
T 2o57_A 169 VFQECARVLKPRGVMAITDPMKEDGIDK-SS----IQPI----LDRIKLHDMGSLGLYRSLAKECGLVTLRTFSRPDSLV 239 (297)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEECTTCCG-GG----GHHH----HHHHTCSSCCCHHHHHHHHHHTTEEEEEEEECHHHHH
T ss_pred HHHHHHHHcCCCeEEEEEEeccCCCCch-HH----HHHH----HHHhcCCCCCCHHHHHHHHHHCCCeEEEEEECchhhH
Confidence 9999999999999999998765432211 11 1111 2222334467899999999999999999988876655
Q ss_pred CchHHHHHhhhhhhhhHHHHhhchhh---hhhhhhHHHHHHHHhcCceEEEEEEEecCC
Q 016921 325 PFWPAVIHSALTWKGFTSLLRTGLKT---IKGALAMPLMIEGYQKNLIKFAIITCRKPR 380 (380)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~vv~arKP~ 380 (380)
.+|.......... ...+...... ......+..+..+.+.|.+.|.+++||||+
T Consensus 240 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~Kp~ 295 (297)
T 2o57_A 240 HHYSKVKAELIKR---SSEIASFCSPEFQANMKRGLEHWIEGGRAGKLTWGGMLFRKSD 295 (297)
T ss_dssp HHHHHHHHHHHHT---HHHHTTTSCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHh---HHHHhccCCHHHHHHHHHHHHHHHHhccCCeEEEEEEEEECCC
Confidence 5444333222111 1101111111 111222334455567889999999999995
No 3
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.97 E-value=2.8e-28 Score=224.73 Aligned_cols=269 Identities=16% Similarity=0.126 Sum_probs=192.7
Q ss_pred HHHHHHHHhccchhhHHHhhccc--ccccccCCCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChH
Q 016921 95 LKEGIAEFYDESSSLWEDIWGDH--MHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGS 172 (380)
Q Consensus 95 ~~~~i~~~yd~~~~~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~ 172 (380)
.+++++.+||..+++|..++++. ++.+||..... ....++.+.++.++..+.+.+ +.+|||||||+|.+
T Consensus 8 ~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~----~l~~a~~~~~~~~~~~~~~~~-----~~~vLDiGcG~G~~ 78 (287)
T 1kpg_A 8 HFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDM----TLQEAQIAKIDLALGKLGLQP-----GMTLLDVGCGWGAT 78 (287)
T ss_dssp CHHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTC----CHHHHHHHHHHHHHTTTTCCT-----TCEEEEETCTTSHH
T ss_pred cHHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCC----CHHHHHHHHHHHHHHHcCCCC-----cCEEEEECCcccHH
Confidence 35579999999999999988876 44678875432 267788888888888776654 88999999999999
Q ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCC--CCHHHHHHHHH
Q 016921 173 SRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHM--PDKSKFVSELA 250 (380)
Q Consensus 173 ~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~--~~~~~~l~~~~ 250 (380)
+..+++..+.+|+|+|+|+.+++.+++++...++..++.++++|+.+++ ++||+|++..+++|+ .++..+++++.
T Consensus 79 ~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~ 155 (287)
T 1kpg_A 79 MMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAH 155 (287)
T ss_dssp HHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHH
Confidence 9999976688999999999999999999988888779999999998765 789999999999999 67899999999
Q ss_pred HhcCCCcEEEEEeccCCCCCCC---ccccch---HHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEecCCCcC
Q 016921 251 RVTAPAGTIIIVTWCHRDLAPS---EESLQP---WEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNVA 324 (380)
Q Consensus 251 r~LkpgG~l~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~~ 324 (380)
++|||||.+++.++........ ...... ....++... .+....+++.+++.++++++||+++++..+..+..
T Consensus 156 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~ 233 (287)
T 1kpg_A 156 RLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTE--IFPGGRLPSIPMVQECASANGFTVTRVQSLQPHYA 233 (287)
T ss_dssp HHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHH--TSTTCCCCCHHHHHHHHHTTTCEEEEEEECHHHHH
T ss_pred HhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHhe--eCCCCCCCCHHHHHHHHHhCCcEEEEEEeCcHhHH
Confidence 9999999999998754331100 000000 011111111 11112346899999999999999999987766543
Q ss_pred CchHHHHHhhhh-hhhhHHHHhhchhhhhhhhhHHHHHHHHhcCceEEEEEEEec
Q 016921 325 PFWPAVIHSALT-WKGFTSLLRTGLKTIKGALAMPLMIEGYQKNLIKFAIITCRK 378 (380)
Q Consensus 325 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~arK 378 (380)
+....+...... +..+...... ....+....+..+..+++.|.+.++.++++|
T Consensus 234 ~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~f~~g~~~~~~~~~~k 287 (287)
T 1kpg_A 234 KTLDLWSAALQANKGQAIALQSE-EVYERYMKYLTGCAEMFRIGYIDVNQFTCQK 287 (287)
T ss_dssp HHHHHHHHHHHHTHHHHHHHSCH-HHHHHHHHHHHHHHHHHHTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHhCCCCeEEEEEEEC
Confidence 322222221111 1111111000 1111223335567788899999999999987
No 4
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.96 E-value=8.6e-28 Score=223.24 Aligned_cols=271 Identities=15% Similarity=0.129 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHhccchhhHHHhhcccc--cccccCCCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCc
Q 016921 92 ARELKEGIAEFYDESSSLWEDIWGDHM--HHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGI 169 (380)
Q Consensus 92 ~~~~~~~i~~~yd~~~~~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGt 169 (380)
+...+++|+++||..+++|..++++.+ +.+||..... ....++.+.++.++..+.+.+ +.+|||||||+
T Consensus 13 ~~~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~----~l~~a~~~~~~~~~~~~~~~~-----~~~vLDiGcG~ 83 (302)
T 3hem_A 13 LKPPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDM----TLEEAQYAKRKLALDKLNLEP-----GMTLLDIGCGW 83 (302)
T ss_dssp CCCCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTC----CHHHHHHHHHHHHHHTTCCCT-----TCEEEEETCTT
T ss_pred ccchHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCC----CHHHHHHHHHHHHHHHcCCCC-----cCEEEEeeccC
Confidence 345678899999999999999999755 4578875542 267888889999999887654 89999999999
Q ss_pred ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCCCCH-------
Q 016921 170 GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDK------- 242 (380)
Q Consensus 170 G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~------- 242 (380)
|.++..+++.++.+|+|+|+|+.+++.|++++...+++.++.++++|+.++ +++||+|++..+++|++++
T Consensus 84 G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~ 160 (302)
T 3hem_A 84 GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFE 160 (302)
T ss_dssp SHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTT
T ss_pred cHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchh
Confidence 999999999878999999999999999999999989888999999999876 6899999999999999665
Q ss_pred --HHHHHHHHHhcCCCcEEEEEeccCCCCCCCcc-cc--chH---HHHHHHHH-hhccCCCCCCCHHHHHHHHHhCCCcE
Q 016921 243 --SKFVSELARVTAPAGTIIIVTWCHRDLAPSEE-SL--QPW---EQELLKKI-CDAYYLPAWCSTADYVKLLQSLSLED 313 (380)
Q Consensus 243 --~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~-~~--~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~aGf~~ 313 (380)
..+++++.++|||||++++.++.......... .. ... ...++... .... .+.+.+++.++++++||++
T Consensus 161 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~s~~~~~~~l~~aGf~~ 237 (302)
T 3hem_A 161 RYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGG---RLPRISQVDYYSSNAGWKV 237 (302)
T ss_dssp HHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTC---CCCCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCC---CCCCHHHHHHHHHhCCcEE
Confidence 79999999999999999999876432110000 00 000 00111111 1111 3468999999999999999
Q ss_pred EEEEecCCCcCCchHHHHHhhhh-hhhhHHHHhhchhhhhhhhhHHHHHHHHhcCceEEEEEEEec
Q 016921 314 IKAEDWSQNVAPFWPAVIHSALT-WKGFTSLLRTGLKTIKGALAMPLMIEGYQKNLIKFAIITCRK 378 (380)
Q Consensus 314 v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~arK 378 (380)
++++.+..+.......+...... +..+..+....+.. .-...+.....+++.|.+..+.++++|
T Consensus 238 ~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~-~w~~yl~~~~~~f~~~~~~~~q~~~~~ 302 (302)
T 3hem_A 238 ERYHRIGANYVPTLNAWADALQAHKDEAIALKGQETCD-IYMHYLRGCSDLFRDKYTDVCQFTLVK 302 (302)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTHHHHHHHHCHHHHH-HHHHHHHHHHHHHHTTSSEEEEEEEEC
T ss_pred EEEEeCchhHHHHHHHHHHHHHHhHHHHHHHhCHHHHH-HHHHHHHHHHHHHhCCCCeEEEEEEEC
Confidence 99998887754333222222211 12222222111111 122334556678899999999999887
No 5
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.96 E-value=2.5e-27 Score=221.64 Aligned_cols=276 Identities=14% Similarity=0.127 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHhccchhhHHHhhccccc--ccccCCCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCc
Q 016921 92 ARELKEGIAEFYDESSSLWEDIWGDHMH--HGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGI 169 (380)
Q Consensus 92 ~~~~~~~i~~~yd~~~~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGt 169 (380)
....+++++++||..+++|..++++.++ .++|..... .....+.+.++.++..+.+.+ +.+|||||||+
T Consensus 31 ~~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~-----~~~vLDiGcG~ 101 (318)
T 2fk8_A 31 TRTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPEL----TLEEAQYAKVDLNLDKLDLKP-----GMTLLDIGCGW 101 (318)
T ss_dssp -------CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTC----CHHHHHHHHHHHHHTTSCCCT-----TCEEEEESCTT
T ss_pred hhhhHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCC----CHHHHHHHHHHHHHHhcCCCC-----cCEEEEEcccc
Confidence 3556778999999999999998887544 578875432 267778888888888776654 88999999999
Q ss_pred ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCC--CCHHHHHH
Q 016921 170 GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHM--PDKSKFVS 247 (380)
Q Consensus 170 G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~--~~~~~~l~ 247 (380)
|.++..+++..+++|+|+|+|+.+++.|+++....++.+++.++++|+.+++ ++||+|++..+++|+ +++..+++
T Consensus 102 G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~ 178 (318)
T 2fk8_A 102 GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFK 178 (318)
T ss_dssp SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHH
T ss_pred hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHH
Confidence 9999999987788999999999999999999988888778999999998874 789999999999999 67899999
Q ss_pred HHHHhcCCCcEEEEEeccCCCCCCCcc-ccc--hHHHHHHHHHhhc-cCCCCCCCHHHHHHHHHhCCCcEEEEEecCCCc
Q 016921 248 ELARVTAPAGTIIIVTWCHRDLAPSEE-SLQ--PWEQELLKKICDA-YYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNV 323 (380)
Q Consensus 248 ~~~r~LkpgG~l~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~ 323 (380)
++.++|||||.+++.++.......... .+. .........+... +....+.+.+++.++++++||+++++..+..+.
T Consensus 179 ~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y 258 (318)
T 2fk8_A 179 RCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLRPHY 258 (318)
T ss_dssp HHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCEECHHHH
T ss_pred HHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEEecchhH
Confidence 999999999999999876433110000 000 0000000111111 111234689999999999999999888766543
Q ss_pred CCchHHHHHhhh-hhhhhHHHHhhchhhhhhhhhHHHHHHHHhcCceEEEEEEEecCC
Q 016921 324 APFWPAVIHSAL-TWKGFTSLLRTGLKTIKGALAMPLMIEGYQKNLIKFAIITCRKPR 380 (380)
Q Consensus 324 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~arKP~ 380 (380)
......+..... .+..+.......+. ......+..+..+++.|.+.++.++++||.
T Consensus 259 ~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~f~~g~~~~~~~~~~k~~ 315 (318)
T 2fk8_A 259 IKTLRIWGDTLQSNKDKAIEVTSEEVY-NRYMKYLRGCEHYFTDEMLDCSLVTYLKPG 315 (318)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHSCHHHH-HHHHHHHHHHHHHHHTTSCEEEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHHHHHHHCCCCeEEEEEEEeCC
Confidence 322111111111 11111111111111 111223445677888999999999999984
No 6
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.94 E-value=3.7e-26 Score=207.76 Aligned_cols=221 Identities=20% Similarity=0.356 Sum_probs=157.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.+..++..+.+. ++.+|||||||+|.++..+++.++.+|+|+|+|+.+++.++++.... .+++++++|+.++
T Consensus 43 ~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 43 ATKKILSDIELN-----ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK 114 (266)
T ss_dssp HHHHHTTTCCCC-----TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC
T ss_pred HHHHHHHhcCCC-----CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC
Confidence 455666665554 48899999999999999999977889999999999999999876433 5899999999999
Q ss_pred CCCCCCccEEEeccccCCC--CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016921 221 PFPDGQFDLVWSMESGEHM--PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~--~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (380)
++++++||+|++..+++|+ .++..+++++.++|||||.+++.++...... .+.......+.. .+ ..+++
T Consensus 115 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~----~~~~~~~~~~~~----~~-~~~~~ 185 (266)
T 3ujc_A 115 EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKE----NWDDEFKEYVKQ----RK-YTLIT 185 (266)
T ss_dssp CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG----GCCHHHHHHHHH----HT-CCCCC
T ss_pred CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc----cchHHHHHHHhc----CC-CCCCC
Confidence 9888999999999999999 7889999999999999999999987544311 222222222211 11 13578
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCCcCCchHHHHHhhhh-hhhhHHHHhhchhhhhhhhhHHHHHHHHhcCceEEEEEEEe
Q 016921 299 TADYVKLLQSLSLEDIKAEDWSQNVAPFWPAVIHSALT-WKGFTSLLRTGLKTIKGALAMPLMIEGYQKNLIKFAIITCR 377 (380)
Q Consensus 299 ~~~~~~ll~~aGf~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~ar 377 (380)
.+++.++|+++||+++++..+..+.............. ...+... ...............+..+...+...|+++++|
T Consensus 186 ~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~w~~~~~~ 264 (266)
T 3ujc_A 186 VEEYADILTACNFKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKL-FSEKKFISLDDGWSRKIKDSKRKMQRWGYFKAT 264 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEEeCCHHHHHHHHHHHHHHHhCHHHHHHh-cCHHHHHHHHHHHHHHHHHHHcCcccceEEEEe
Confidence 99999999999999999988776544322222211111 1111111 011111111222334455667889999999999
Q ss_pred cC
Q 016921 378 KP 379 (380)
Q Consensus 378 KP 379 (380)
||
T Consensus 265 Kp 266 (266)
T 3ujc_A 265 KN 266 (266)
T ss_dssp CC
T ss_pred CC
Confidence 98
No 7
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.94 E-value=9.5e-26 Score=210.46 Aligned_cols=209 Identities=23% Similarity=0.382 Sum_probs=161.0
Q ss_pred HHHHHHHHHHcC-CCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC
Q 016921 139 VRMIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (380)
Q Consensus 139 ~~~~~~ll~~~~-~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 217 (380)
....+.++..+. +. ++.+|||||||+|.++..+++..+.+|+|+|+++.+++.|++++...++..++.++++|+
T Consensus 102 ~~~~~~l~~~l~~~~-----~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 176 (312)
T 3vc1_A 102 SAQAEFLMDHLGQAG-----PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM 176 (312)
T ss_dssp HHHHHHHHTTSCCCC-----TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHHHHHHHHHhccCC-----CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 333444555554 33 489999999999999999999778899999999999999999999998888999999999
Q ss_pred CCCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCC
Q 016921 218 LQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (380)
Q Consensus 218 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (380)
.++++++++||+|++..+++|+ ++..+++++.++|||||++++.++....... ....+.. .+... ..+.++
T Consensus 177 ~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~~~~~-~~~~~----~~~~~~ 247 (312)
T 3vc1_A 177 LDTPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYG---QPSKWVS-QINAH----FECNIH 247 (312)
T ss_dssp TSCCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTC---SCCHHHH-HHHHH----HTCCCC
T ss_pred hcCCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEcccccccc---chhHHHH-HHHhh----hcCCCC
Confidence 9999888999999999999999 6999999999999999999999876544321 1122211 12111 123467
Q ss_pred CHHHHHHHHHhCCCcEEEEEecCCCcCCchHHHHHhhhhhhhhHHHHhhchhhhhhhhhHHHHHHHHhcCceEEEEEEEe
Q 016921 298 STADYVKLLQSLSLEDIKAEDWSQNVAPFWPAVIHSALTWKGFTSLLRTGLKTIKGALAMPLMIEGYQKNLIKFAIITCR 377 (380)
Q Consensus 298 ~~~~~~~ll~~aGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~ar 377 (380)
+.+++.++|+++||++++++.+.....++|....... ........+..++.++...|++|+|+
T Consensus 248 s~~~~~~~l~~aGf~~~~~~~~~~~~~~~w~~~~~~~-----------------~~~g~~~~~~~~~~~~~~~y~~i~a~ 310 (312)
T 3vc1_A 248 SRREYLRAMADNRLVPHTIVDLTPDTLPYWELRATSS-----------------LVTGIEKAFIESYRDGSFQYVLIAAD 310 (312)
T ss_dssp BHHHHHHHHHTTTEEEEEEEECHHHHHHHHHHHTTST-----------------TCCSCHHHHHHHHHHTSEEEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHHHHh-----------------hhhcChHHHHHHHHhcCCcEEEEEEe
Confidence 8999999999999999999988754434443332211 11122345667888999999999999
Q ss_pred c
Q 016921 378 K 378 (380)
Q Consensus 378 K 378 (380)
|
T Consensus 311 k 311 (312)
T 3vc1_A 311 R 311 (312)
T ss_dssp E
T ss_pred e
Confidence 8
No 8
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.93 E-value=5.7e-24 Score=192.53 Aligned_cols=155 Identities=19% Similarity=0.267 Sum_probs=129.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.+++++...++++++.++++|+.++++++++||+|++..+++
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 47899999999999999999986669999999999999999999999988889999999999998889999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 317 (380)
|+ ++..+++++.++|||||++++.+......... ......+.. . .+.+.+.+++.++|+++||++++..
T Consensus 126 ~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-----~~~~~~~~~---~--~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 126 NI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERP-----AEIEDFWMD---A--YPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp CC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCC-----HHHHHHHHH---H--CTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCCh-----HHHHHHHHH---h--CCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 99 89999999999999999999998653322111 111111111 1 1335789999999999999999988
Q ss_pred ecCCCc
Q 016921 318 DWSQNV 323 (380)
Q Consensus 318 ~~~~~~ 323 (380)
.+....
T Consensus 195 ~~~~~~ 200 (257)
T 3f4k_A 195 ILPENC 200 (257)
T ss_dssp ECCGGG
T ss_pred ECChhh
Confidence 776543
No 9
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.92 E-value=3.5e-24 Score=193.83 Aligned_cols=165 Identities=17% Similarity=0.187 Sum_probs=133.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.+..++..+.+.+ +.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|++++...++..++.++++|+.++
T Consensus 24 ~~~~l~~~~~~~~-----~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 24 KYATLGRVLRMKP-----GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY 98 (256)
T ss_dssp HHHHHHHHTCCCT-----TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred HHHHHHHhcCCCC-----CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC
Confidence 4566666666554 88999999999999999999878899999999999999999999888877999999999998
Q ss_pred CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016921 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
++ +++||+|++..+++|++++..+++++.++|||||++++.+........ .. .+...........+++.+
T Consensus 99 ~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~ 168 (256)
T 1nkv_A 99 VA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPA-----TE----EIAQACGVSSTSDFLTLP 168 (256)
T ss_dssp CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCS-----SH----HHHHTTTCSCGGGSCCHH
T ss_pred Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCC-----hH----HHHHHHhcccccccCCHH
Confidence 87 789999999999999999999999999999999999998864432211 11 111111112222467899
Q ss_pred HHHHHHHhCCCcEEEEEecC
Q 016921 301 DYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 301 ~~~~ll~~aGf~~v~~~~~~ 320 (380)
++.++|+++||+++++....
T Consensus 169 ~~~~~l~~aGf~~~~~~~~~ 188 (256)
T 1nkv_A 169 GLVGAFDDLGYDVVEMVLAD 188 (256)
T ss_dssp HHHHHHHTTTBCCCEEEECC
T ss_pred HHHHHHHHCCCeeEEEEeCC
Confidence 99999999999998876443
No 10
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.92 E-value=2.9e-23 Score=189.14 Aligned_cols=154 Identities=19% Similarity=0.261 Sum_probs=128.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|++++...+++++++++++|+.++++++++||+|++..+++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCce
Confidence 48999999999999999999975569999999999999999999999988889999999999988889999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 317 (380)
|+ ++..+++++.++|||||++++.+......... ......+. .. .+.+.+.+++.++|+++||+++++.
T Consensus 126 ~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-----~~~~~~~~---~~--~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 126 NI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERP-----AEINDFWM---DA--YPEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp GT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCC-----HHHHHHHH---HH--CTTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred ec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCCh-----HHHHHHHH---Hh--CCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 99 89999999999999999999998653322111 11111111 11 1345689999999999999999998
Q ss_pred ecCCC
Q 016921 318 DWSQN 322 (380)
Q Consensus 318 ~~~~~ 322 (380)
.+...
T Consensus 195 ~~~~~ 199 (267)
T 3kkz_A 195 ILPEN 199 (267)
T ss_dssp ECCGG
T ss_pred ECCHh
Confidence 87654
No 11
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.91 E-value=2.9e-23 Score=188.42 Aligned_cols=168 Identities=23% Similarity=0.330 Sum_probs=132.1
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 016921 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (380)
Q Consensus 142 ~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (380)
+..++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++++...+++ ++.++++|+++++
T Consensus 26 ~~~l~~~l~~~~-----~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~ 98 (260)
T 1vl5_A 26 LAKLMQIAALKG-----NEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMP 98 (260)
T ss_dssp HHHHHHHHTCCS-----CCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCC
T ss_pred HHHHHHHhCCCC-----CCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCC
Confidence 445555555544 889999999999999999987 569999999999999999999887764 7999999999999
Q ss_pred CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHH
Q 016921 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (380)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (380)
+++++||+|++..+++|++|+..+++++.++|||||++++.++..... .....+ ...+....... ....++.++
T Consensus 99 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~----~~~~~~-~~~~~~~~~~~-~~~~~~~~~ 172 (260)
T 1vl5_A 99 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN----DAFDVF-YNYVEKERDYS-HHRAWKKSD 172 (260)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS----HHHHHH-HHHHHHHHCTT-CCCCCBHHH
T ss_pred CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC----HHHHHH-HHHHHHhcCcc-ccCCCCHHH
Confidence 988999999999999999999999999999999999999987643221 111111 11122222211 223578999
Q ss_pred HHHHHHhCCCcEEEEEecCCC
Q 016921 302 YVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 302 ~~~ll~~aGf~~v~~~~~~~~ 322 (380)
+.++|+++||+++.+..+...
T Consensus 173 ~~~~l~~aGf~~~~~~~~~~~ 193 (260)
T 1vl5_A 173 WLKMLEEAGFELEELHCFHKT 193 (260)
T ss_dssp HHHHHHHHTCEEEEEEEEEEE
T ss_pred HHHHHHHCCCeEEEEEEeecc
Confidence 999999999999988776543
No 12
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.91 E-value=1.8e-23 Score=192.45 Aligned_cols=176 Identities=16% Similarity=0.138 Sum_probs=132.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 139 ~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
.+.+..++..+.. ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+++.++.++++|+.
T Consensus 55 ~~~l~~~l~~~~~------~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 127 (285)
T 4htf_A 55 WQDLDRVLAEMGP------QKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQ 127 (285)
T ss_dssp HHHHHHHHHHTCS------SCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGG
T ss_pred HHHHHHHHHhcCC------CCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHH
Confidence 3445566666542 2689999999999999999987 88999999999999999999988888778999999999
Q ss_pred CCC-CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHh----hccCC
Q 016921 219 QQP-FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC----DAYYL 293 (380)
Q Consensus 219 ~~~-~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 293 (380)
+++ +++++||+|++..+++|++++..+++++.++|||||.+++.++.............. ......... .....
T Consensus 128 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 206 (285)
T 4htf_A 128 DVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGN-FDYVQAGMPKKKKRTLSP 206 (285)
T ss_dssp GTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTC-HHHHHTTCCCC----CCC
T ss_pred HhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcC-HHHHhhhccccccccCCC
Confidence 987 678999999999999999999999999999999999999988542110000000000 000000000 01111
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEEEecCCC
Q 016921 294 PAWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 294 ~~~~~~~~~~~ll~~aGf~~v~~~~~~~~ 322 (380)
..+++++++.++|+++||+++++..+...
T Consensus 207 ~~~~~~~~l~~~l~~aGf~v~~~~~~~~~ 235 (285)
T 4htf_A 207 DYPRDPTQVYLWLEEAGWQIMGKTGVRVF 235 (285)
T ss_dssp SCCBCHHHHHHHHHHTTCEEEEEEEESSS
T ss_pred CCCCCHHHHHHHHHHCCCceeeeeeEEEe
Confidence 24578999999999999999998877543
No 13
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.90 E-value=4.1e-23 Score=187.36 Aligned_cols=153 Identities=20% Similarity=0.229 Sum_probs=118.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++ .+...++.++++|+.++++++++||+|++..+++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 4889999999999999999987 789999999999999999887 2334689999999999988889999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCC-----CCCCHHHHHHHHHhCCCc
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLP-----AWCSTADYVKLLQSLSLE 312 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~aGf~ 312 (380)
|++++..+++++.++|||||.+++. +..... .....+ ...+.......+.+ .+++.+++.++|+++||+
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 189 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEG-WDQAEA----SPEWTL-QERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLK 189 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEE-EEEECC----CHHHHH-HHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCc----cHHHHH-HHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCC
Confidence 9999999999999999999999987 322110 110001 11222222221111 245788999999999999
Q ss_pred EEEEEec
Q 016921 313 DIKAEDW 319 (380)
Q Consensus 313 ~v~~~~~ 319 (380)
++.+...
T Consensus 190 ~~~~~~~ 196 (263)
T 2yqz_A 190 PRTREVA 196 (263)
T ss_dssp CEEEEEE
T ss_pred cceEEEe
Confidence 8776443
No 14
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.90 E-value=1.9e-22 Score=184.52 Aligned_cols=164 Identities=24% Similarity=0.341 Sum_probs=128.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.+++++...+++ ++.++.+|+.++++++++||+|++..++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCCCCCeeEEEEechh
Confidence 48999999999999999999987 689999999999999999999888774 7999999999998888999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCC--CCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEE
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLA--PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v 314 (380)
+|++++..+++++.++|||||.+++.+....... +.......+...... ...... ....+..++..+|+++||+++
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~l~~~l~~aGf~~v 193 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIR-VQAYMK-GNSLVGRQIYPLLQESGFEKI 193 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHH-HHHHTT-CCTTGGGGHHHHHHHTTCEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHH-HHHhcC-CCcchHHHHHHHHHHCCCCeE
Confidence 9999999999999999999999999885432221 111111111111111 111111 123567899999999999999
Q ss_pred EEEecCCCcC
Q 016921 315 KAEDWSQNVA 324 (380)
Q Consensus 315 ~~~~~~~~~~ 324 (380)
+++....+..
T Consensus 194 ~~~~~~~~~~ 203 (276)
T 3mgg_A 194 RVEPRMVYID 203 (276)
T ss_dssp EEEEEEEEEC
T ss_pred EEeeEEEECC
Confidence 9987655444
No 15
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.90 E-value=9.6e-23 Score=184.84 Aligned_cols=153 Identities=14% Similarity=0.162 Sum_probs=119.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 234 (380)
++.+|||||||+|..+..+++.. +++|+|+|+|+.|++.|++++...+...+++|+++|+.++++ ++||+|++..
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~~~ 147 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVLNF 147 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--cccccceeee
Confidence 48999999999999999999875 579999999999999999999888887899999999999875 4699999999
Q ss_pred ccCCCCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhc--c-------------CCCCCC
Q 016921 235 SGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA--Y-------------YLPAWC 297 (380)
Q Consensus 235 ~l~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------~~~~~~ 297 (380)
+++|+++ ...++++++++|||||.|++.+...... .............+... + ......
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~----~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFED----AKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSS----HHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCC----HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 9999964 4579999999999999999998654322 11111111111111000 0 001236
Q ss_pred CHHHHHHHHHhCCCcEEEE
Q 016921 298 STADYVKLLQSLSLEDIKA 316 (380)
Q Consensus 298 ~~~~~~~ll~~aGf~~v~~ 316 (380)
+.+++.++|+++||+.|++
T Consensus 224 s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp CHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHcCCCeEEE
Confidence 8899999999999998875
No 16
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.89 E-value=4.3e-22 Score=182.61 Aligned_cols=154 Identities=17% Similarity=0.221 Sum_probs=119.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++ .+.+|+|+|+|+.|++.++++. +++.+.++|+.++++ +++||+|++..+++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~ 128 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRV-DKPLDAVFSNAMLH 128 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCC-SSCEEEEEEESCGG
T ss_pred CCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCc-CCCcCEEEEcchhh
Confidence 388999999999999999998 4889999999999999998764 478999999999886 58999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhh----ccCCCCCCCHHHHHHHHHhCCCcE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD----AYYLPAWCSTADYVKLLQSLSLED 313 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ll~~aGf~~ 313 (380)
|++++..+++++.++|||||++++..+..... ..+.......+..... ......+.+.+++.++|+++||++
T Consensus 129 ~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 204 (279)
T 3ccf_A 129 WVKEPEAAIASIHQALKSGGRFVAEFGGKGNI----KYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDV 204 (279)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEECTTTT----HHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEE
T ss_pred hCcCHHHHHHHHHHhcCCCcEEEEEecCCcch----HHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEE
Confidence 99999999999999999999999987543221 0111111111111110 001113568999999999999999
Q ss_pred EEEEecCCCc
Q 016921 314 IKAEDWSQNV 323 (380)
Q Consensus 314 v~~~~~~~~~ 323 (380)
+.++.+....
T Consensus 205 ~~~~~~~~~~ 214 (279)
T 3ccf_A 205 TYAALFNRPT 214 (279)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEecccc
Confidence 9887665443
No 17
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=1.3e-21 Score=177.16 Aligned_cols=157 Identities=20% Similarity=0.199 Sum_probs=119.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
....++..+... ++.+|||||||+|.++..+++.+ +.+|+|+|+|+.|++.++++. +++.++++|+.+
T Consensus 21 ~~~~l~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~ 89 (259)
T 2p35_A 21 PARDLLAQVPLE-----RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLAT 89 (259)
T ss_dssp HHHHHHTTCCCS-----CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTT
T ss_pred HHHHHHHhcCCC-----CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhh
Confidence 344556655543 37899999999999999999986 789999999999999998862 579999999999
Q ss_pred CCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHH--Hhhc-----cC
Q 016921 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK--ICDA-----YY 292 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~ 292 (380)
++ ++++||+|++..+++|++++..+++++.++|||||++++.++.... ............. +... ..
T Consensus 90 ~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (259)
T 2p35_A 90 WK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQ-----EPTHIAMHETADGGPWKDAFSGGGLR 163 (259)
T ss_dssp CC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTT-----SHHHHHHHHHHHHSTTGGGC------
T ss_pred cC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCC-----cHHHHHHHHHhcCcchHHHhcccccc
Confidence 88 7889999999999999999999999999999999999998853211 1111111111111 0000 01
Q ss_pred CCCCCCHHHHHHHHHhCCCcEE
Q 016921 293 LPAWCSTADYVKLLQSLSLEDI 314 (380)
Q Consensus 293 ~~~~~~~~~~~~ll~~aGf~~v 314 (380)
...+++.+++.++|+++||++.
T Consensus 164 ~~~~~~~~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 164 RKPLPPPSDYFNALSPKSSRVD 185 (259)
T ss_dssp -CCCCCHHHHHHHHGGGEEEEE
T ss_pred ccCCCCHHHHHHHHHhcCCceE
Confidence 2246789999999999999743
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.88 E-value=8.9e-23 Score=182.09 Aligned_cols=157 Identities=17% Similarity=0.208 Sum_probs=121.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.+++++...+ ++.++++|+.+++++ ++||+|++..++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~-~~fD~v~~~~~l 119 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE-EKYDMVVSALSI 119 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC-SCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC-CCceEEEEeCcc
Confidence 57899999999999999999987 7899999999999999998875433 799999999998876 899999999999
Q ss_pred CCCCCHH--HHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHH--------------HhhccCCCCCCCHH
Q 016921 237 EHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK--------------ICDAYYLPAWCSTA 300 (380)
Q Consensus 237 ~~~~~~~--~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~ 300 (380)
+|+++.. .++++++++|||||.+++.++....... ........+.. ..........++.+
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINADLVHGETAF----IENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMN 195 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHH----HHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHH
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChh----hhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHH
Confidence 9998765 5999999999999999999875433211 11111111111 11111223457899
Q ss_pred HHHHHHHhCCCcEEEEEecCCC
Q 016921 301 DYVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 301 ~~~~ll~~aGf~~v~~~~~~~~ 322 (380)
++.++|+++||+++++......
T Consensus 196 ~~~~ll~~aGF~~v~~~~~~~~ 217 (234)
T 3dtn_A 196 QQLNWLKEAGFRDVSCIYKYYQ 217 (234)
T ss_dssp HHHHHHHHTTCEEEEEEEEETT
T ss_pred HHHHHHHHcCCCceeeeeeecc
Confidence 9999999999999987654433
No 19
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.88 E-value=5e-22 Score=180.41 Aligned_cols=162 Identities=22% Similarity=0.217 Sum_probs=124.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
+.+.++..+...+ +.+|||||||+|.++..+++. +.+|+|+|+|+.|++.++++. ++.|+++|++++
T Consensus 22 ~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~ 88 (261)
T 3ege_A 22 IVNAIINLLNLPK-----GSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL 88 (261)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC
T ss_pred HHHHHHHHhCCCC-----CCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC
Confidence 4455556555443 899999999999999999985 889999999999998775432 799999999999
Q ss_pred CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016921 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
++++++||+|++..+++|++++..++++++++|| ||++++.++.......... ............ ..+.+.+
T Consensus 89 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~ 160 (261)
T 3ege_A 89 ALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWL--YDYFPFLWEDAL-----RFLPLDE 160 (261)
T ss_dssp CSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGG--GGTCHHHHHHHH-----TSCCHHH
T ss_pred CCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHH--HHHHHHHhhhhh-----hhCCCHH
Confidence 9888999999999999999999999999999999 9999998875433221110 011111111111 1245788
Q ss_pred HHHHHHHhCCCcEEEEEecCCCcC
Q 016921 301 DYVKLLQSLSLEDIKAEDWSQNVA 324 (380)
Q Consensus 301 ~~~~ll~~aGf~~v~~~~~~~~~~ 324 (380)
++. +|+++||++++++.+..++.
T Consensus 161 ~~~-~l~~aGF~~v~~~~~~~p~~ 183 (261)
T 3ege_A 161 QIN-LLQENTKRRVEAIPFLLPHD 183 (261)
T ss_dssp HHH-HHHHHHCSEEEEEECCEETT
T ss_pred HHH-HHHHcCCCceeEEEecCCCc
Confidence 899 99999999999988765443
No 20
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.88 E-value=2.2e-21 Score=173.81 Aligned_cols=168 Identities=23% Similarity=0.385 Sum_probs=133.5
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 016921 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (380)
Q Consensus 142 ~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (380)
...++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...+++ ++.++++|+++++
T Consensus 10 ~~~~~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 10 LGLMIKTAECRA-----EHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLP 82 (239)
T ss_dssp HHHHHHHHTCCT-----TCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCC
T ss_pred cchHHHHhCcCC-----CCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCC
Confidence 344556666554 899999999999999999987 679999999999999999999887764 7999999999999
Q ss_pred CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHH
Q 016921 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (380)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (380)
+++++||+|++..+++|++++..+++++.++|||||++++.+...... .....+. ..+.......+ ...++.++
T Consensus 83 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~-~~~~~~~~ 156 (239)
T 1xxl_A 83 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED----PVLDEFV-NHLNRLRDPSH-VRESSLSE 156 (239)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS----HHHHHHH-HHHHHHHCTTC-CCCCBHHH
T ss_pred CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC----hhHHHHH-HHHHHhccccc-cCCCCHHH
Confidence 888999999999999999999999999999999999999988654321 1111111 11222222222 23578999
Q ss_pred HHHHHHhCCCcEEEEEecCCC
Q 016921 302 YVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 302 ~~~ll~~aGf~~v~~~~~~~~ 322 (380)
+.++|+++||+++.+..+...
T Consensus 157 ~~~ll~~aGf~~~~~~~~~~~ 177 (239)
T 1xxl_A 157 WQAMFSANQLAYQDIQKWNLP 177 (239)
T ss_dssp HHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHCCCcEEEEEeecCc
Confidence 999999999999988877544
No 21
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.88 E-value=2e-22 Score=175.85 Aligned_cols=179 Identities=15% Similarity=0.145 Sum_probs=137.6
Q ss_pred HHHHHhccchhhHHHhhcccccccccCCCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHH
Q 016921 98 GIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLA 177 (380)
Q Consensus 98 ~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~ 177 (380)
.+.++||..+..|...+....... .....++..++... +.+|||||||+|.++..++
T Consensus 4 ~~~~~y~~~a~~y~~~~~~~~~~~--------------~~~~~~l~~~~~~~---------~~~vLDiGcG~G~~~~~l~ 60 (203)
T 3h2b_A 4 DVSKAYSSPTFDAEALLGTVISAE--------------DPDRVLIEPWATGV---------DGVILDVGSGTGRWTGHLA 60 (203)
T ss_dssp HHHHHHHCTTTCHHHHTCSSCCTT--------------CTTHHHHHHHHHHC---------CSCEEEETCTTCHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHhhhhcccc--------------HHHHHHHHHHhccC---------CCeEEEecCCCCHHHHHHH
Confidence 377888888888876654321110 01122344444332 6789999999999999999
Q ss_pred HHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCCC--CHHHHHHHHHHhcCC
Q 016921 178 KKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMP--DKSKFVSELARVTAP 255 (380)
Q Consensus 178 ~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~--~~~~~l~~~~r~Lkp 255 (380)
+. +.+|+|+|+|+.+++.++++. .++.++++|+.++++++++||+|++..+++|++ ++..+++++.++|||
T Consensus 61 ~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~p 133 (203)
T 3h2b_A 61 SL-GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVED 133 (203)
T ss_dssp HT-TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEE
T ss_pred hc-CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCC
Confidence 87 889999999999999998863 479999999999888889999999999999996 889999999999999
Q ss_pred CcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 016921 256 AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (380)
Q Consensus 256 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 321 (380)
||.+++.++......... .......+++.+++.++|+++||+++++..+..
T Consensus 134 gG~l~i~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 134 GGGLLMSFFSGPSLEPMY---------------HPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp EEEEEEEEECCSSCEEEC---------------CSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred CcEEEEEEccCCchhhhh---------------chhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 999999986543311100 011111246899999999999999999987765
No 22
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.88 E-value=8.4e-23 Score=180.43 Aligned_cols=150 Identities=16% Similarity=0.182 Sum_probs=115.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. .++.++++|+.+++++ ++||+|++..+++|
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-TSIDTIVSTYAFHH 118 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC-SCCSEEEEESCGGG
T ss_pred CCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC-CCeEEEEECcchhc
Confidence 789999999999999999987 8899999999999999988753 4799999999999877 99999999999999
Q ss_pred CCCHHH--HHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHH----HhhccCCCCCCCHHHHHHHHHhCCCc
Q 016921 239 MPDKSK--FVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK----ICDAYYLPAWCSTADYVKLLQSLSLE 312 (380)
Q Consensus 239 ~~~~~~--~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ll~~aGf~ 312 (380)
+++... +++++.++|||||.+++.++..... ............. .........+++.+++.++|+++||+
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 194 (220)
T 3hnr_A 119 LTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQ----DAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFH 194 (220)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSH----HHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEEeccccCh----HHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCE
Confidence 998876 9999999999999999998543221 1111100000000 00000111245899999999999998
Q ss_pred EEEEEec
Q 016921 313 DIKAEDW 319 (380)
Q Consensus 313 ~v~~~~~ 319 (380)
++.....
T Consensus 195 v~~~~~~ 201 (220)
T 3hnr_A 195 VTFTRLN 201 (220)
T ss_dssp EEEEECS
T ss_pred EEEeecc
Confidence 8876543
No 23
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.88 E-value=5.4e-22 Score=174.62 Aligned_cols=169 Identities=18% Similarity=0.162 Sum_probs=130.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
.+.+.++..+...+ + +|||||||+|.++..+++..+.+|+|+|+|+.+++.|++++...++.+++.++++|+.+
T Consensus 31 ~~~~~~~~~~~~~~-----~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 104 (219)
T 3dlc_A 31 IIAENIINRFGITA-----G-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN 104 (219)
T ss_dssp HHHHHHHHHHCCCE-----E-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB
T ss_pred HHHHHHHHhcCCCC-----C-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH
Confidence 35566666665443 4 99999999999999999875679999999999999999999998887899999999999
Q ss_pred CCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhcc-----CCC
Q 016921 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAY-----YLP 294 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 294 (380)
+++++++||+|++..+++|++++..+++++.++|||||.+++.+..... .........+......+ ...
T Consensus 105 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (219)
T 3dlc_A 105 IPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK------ELRDSISAEMIRKNPDWKEFNRKNI 178 (219)
T ss_dssp CSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH------HHHHHHHHHHHHHCTTHHHHHHHHS
T ss_pred CCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH------HHHHHHHHHHHHhHHHHHhhhhhcc
Confidence 9988899999999999999999999999999999999999998743211 11111111111110000 001
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEecC
Q 016921 295 AWCSTADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 295 ~~~~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
..++.+++.++|+++||+++++....
T Consensus 179 ~~~~~~~~~~~l~~aGf~~v~~~~~~ 204 (219)
T 3dlc_A 179 SQENVERFQNVLDEIGISSYEIILGD 204 (219)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEEEET
T ss_pred ccCCHHHHHHHHHHcCCCeEEEEecC
Confidence 23578999999999999998876443
No 24
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.87 E-value=1.3e-21 Score=175.54 Aligned_cols=147 Identities=11% Similarity=0.016 Sum_probs=116.1
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... ++.++++|+.++ .++++||+|++.++++|
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~ 115 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-QLPRRYDNIVLTHVLEH 115 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-CCSSCEEEEEEESCGGG
T ss_pred CCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-CcCCcccEEEEhhHHHh
Confidence 678999999999999999986 67999999999999999987532 799999999887 46789999999999999
Q ss_pred CCCHHHHHHHHH-HhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHH----------HhhccCCCCCCCHHHHHHHHH
Q 016921 239 MPDKSKFVSELA-RVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK----------ICDAYYLPAWCSTADYVKLLQ 307 (380)
Q Consensus 239 ~~~~~~~l~~~~-r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ll~ 307 (380)
++++..+++++. ++|||||++++.++..... .... ..... .........+++.+++.++|+
T Consensus 116 ~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 187 (250)
T 2p7i_A 116 IDDPVALLKRINDDWLAEGGRLFLVCPNANAV-------SRQI-AVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDAS 187 (250)
T ss_dssp CSSHHHHHHHHHHTTEEEEEEEEEEEECTTCH-------HHHH-HHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHhcCCCCEEEEEcCChHHH-------HHHH-HHHcCccccchhcccccccccccccCCHHHHHHHHH
Confidence 999999999999 9999999999988543211 0000 00000 000111224579999999999
Q ss_pred hCCCcEEEEEecC
Q 016921 308 SLSLEDIKAEDWS 320 (380)
Q Consensus 308 ~aGf~~v~~~~~~ 320 (380)
++||++++...+.
T Consensus 188 ~~Gf~~~~~~~~~ 200 (250)
T 2p7i_A 188 RAGLQVTYRSGIF 200 (250)
T ss_dssp HTTCEEEEEEEEE
T ss_pred HCCCeEEEEeeeE
Confidence 9999999887543
No 25
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.87 E-value=3.2e-21 Score=170.08 Aligned_cols=156 Identities=22% Similarity=0.286 Sum_probs=131.1
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
..++..+.+.+ +.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++...+++ ++.++++|+.++
T Consensus 27 ~~~~~~~~~~~-----~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~ 100 (219)
T 3dh0_A 27 EKVLKEFGLKE-----GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKI 100 (219)
T ss_dssp HHHHHHHTCCT-----TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBC
T ss_pred HHHHHHhCCCC-----CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccC
Confidence 44555555544 8899999999999999999985 479999999999999999999888775 799999999999
Q ss_pred CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016921 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
++++++||+|++..+++|++++..+++++.++|||||.+++.++......... .....++.+
T Consensus 101 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------------------~~~~~~~~~ 162 (219)
T 3dh0_A 101 PLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGP------------------PPEEVYSEW 162 (219)
T ss_dssp SSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC------------------CGGGSCCHH
T ss_pred CCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCC------------------chhcccCHH
Confidence 88889999999999999999999999999999999999999987644321110 011246899
Q ss_pred HHHHHHHhCCCcEEEEEecCCC
Q 016921 301 DYVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 301 ~~~~ll~~aGf~~v~~~~~~~~ 322 (380)
++.++++++||++++...+...
T Consensus 163 ~~~~~l~~~Gf~~~~~~~~~~~ 184 (219)
T 3dh0_A 163 EVGLILEDAGIRVGRVVEVGKY 184 (219)
T ss_dssp HHHHHHHHTTCEEEEEEEETTT
T ss_pred HHHHHHHHCCCEEEEEEeeCCc
Confidence 9999999999999998776643
No 26
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.87 E-value=1.1e-20 Score=173.74 Aligned_cols=205 Identities=17% Similarity=0.153 Sum_probs=144.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (380)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+ .+++++++|+.++++ +++||+|++..+
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 98 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP--YDSEFLEGDATEIEL-NDKYDIAICHAF 98 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS--SEEEEEESCTTTCCC-SSCEEEEEEESC
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEcchhhcCc-CCCeeEEEECCh
Confidence 48999999999999999999876 4799999999999999999987655 389999999999887 479999999999
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEEeccC-----CCCCC-----CccccchHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCH-----RDLAP-----SEESLQPWEQELLKKICDAYYLPAWCSTADYVKL 305 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (380)
++|++++..++++++++|||||++++.+... ..... .......+ ...+.......+ ..+.+..++.++
T Consensus 99 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~~ 176 (284)
T 3gu3_A 99 LLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVL-QKLFESDTQRNG-KDGNIGMKIPIY 176 (284)
T ss_dssp GGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHH-HHHHHHHHHHTC-CCTTGGGTHHHH
T ss_pred hhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHH-HHHHHHHhhhhc-ccccHHHHHHHH
Confidence 9999999999999999999999999988641 10000 00011111 122222222222 234567889999
Q ss_pred HHhCCCcEEEEEecC----CCcCCchHHH-------HHhh-----hhhhhh-HHHHhhchhhhhhhhhHHHHHHHHhcC
Q 016921 306 LQSLSLEDIKAEDWS----QNVAPFWPAV-------IHSA-----LTWKGF-TSLLRTGLKTIKGALAMPLMIEGYQKN 367 (380)
Q Consensus 306 l~~aGf~~v~~~~~~----~~~~~~~~~~-------~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (380)
|+++||++|++.... .+...|..+. .... ....++ ..+...+|...+....+...++.+++.
T Consensus 177 l~~aGF~~v~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~G~~~~~~~~~~~~~~l~~~g~~~~e~~~~~~~~~~~~~~~ 255 (284)
T 3gu3_A 177 LSELGVKNIECRVSDKVNFLDSNMHHNDKNDLYQSLKEEGIAGDPGDKQQFVERLIARGLTYDNALAQYEAELRFFKAL 255 (284)
T ss_dssp HHHTTCEEEEEEECCCCEEECTTCCSHHHHHHHHHHHHTTTTCCCCCHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHcCCCeEEEEEcCCccccCCCCChHHHHHHHHHHHhccccCCcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHh
Confidence 999999999884333 2223332222 1100 011222 334446787777777788877777654
No 27
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.86 E-value=3.6e-21 Score=172.36 Aligned_cols=149 Identities=21% Similarity=0.303 Sum_probs=121.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ...++.++++|+.++++++++||+|++..+++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 127 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINSLE 127 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESCTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcChHh
Confidence 3789999999999999999997 889999999999999998764 23579999999999998889999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 317 (380)
|++++..+++++.++|+|||.+++.++....... .. .+............++++++.++++++||++++..
T Consensus 128 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 128 WTEEPLRALNEIKRVLKSDGYACIAILGPTAKPR-EN--------SYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp SSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGG-GG--------GGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhh-hh--------hhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 9999999999999999999999999864332110 00 11111122222345789999999999999999987
Q ss_pred ecC
Q 016921 318 DWS 320 (380)
Q Consensus 318 ~~~ 320 (380)
.+.
T Consensus 199 ~~~ 201 (242)
T 3l8d_A 199 GVY 201 (242)
T ss_dssp EEE
T ss_pred ccc
Confidence 553
No 28
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.86 E-value=2.5e-21 Score=173.60 Aligned_cols=199 Identities=13% Similarity=0.165 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHhccchhhHHHhhcccccccccCCCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcCh
Q 016921 92 ARELKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGG 171 (380)
Q Consensus 92 ~~~~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~ 171 (380)
....++.+.++||.....|+..++..-... .........++..++..+. ...++.+|||||||+|.
T Consensus 27 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~----~~~~~~~vLDiGcG~G~ 92 (241)
T 2ex4_A 27 EKQFYSKAKTYWKQIPPTVDGMLGGYGHIS----------SIDINSSRKFLQRFLREGP----NKTGTSCALDCGAGIGR 92 (241)
T ss_dssp HHHHHHHHHHHHHTSCSSHHHHTTTCGGGH----------HHHHHHHHHHHHGGGC--------CCCCSEEEEETCTTTH
T ss_pred cchhHHHHHHHHhcCCccccccccCCCCcc----------hhhHHhHHHHHHHHHHhcc----cCCCCCEEEEECCCCCH
Confidence 456777788899888777766554311000 0011222333333333221 11247899999999999
Q ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCCCCHH--HHHHHH
Q 016921 172 SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKS--KFVSEL 249 (380)
Q Consensus 172 ~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~--~~l~~~ 249 (380)
++..+++....+|+|+|+|+.+++.|++++...+ ..++.++++|+.++++++++||+|++..+++|+++.. .+++++
T Consensus 93 ~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~ 171 (241)
T 2ex4_A 93 ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRC 171 (241)
T ss_dssp HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHH
Confidence 9999988756699999999999999999886553 2468999999999888778999999999999998854 899999
Q ss_pred HHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 016921 250 ARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (380)
Q Consensus 250 ~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 321 (380)
.++|||||++++.++.... ...+. ........+.+++.++|+++||++++......
T Consensus 172 ~~~LkpgG~l~i~~~~~~~----~~~~~------------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 227 (241)
T 2ex4_A 172 KGSLRPNGIIVIKDNMAQE----GVILD------------DVDSSVCRDLDVVRRIICSAGLSLLAEERQEN 227 (241)
T ss_dssp HHHEEEEEEEEEEEEEBSS----SEEEE------------TTTTEEEEBHHHHHHHHHHTTCCEEEEEECCS
T ss_pred HHhcCCCeEEEEEEccCCC----cceec------------ccCCcccCCHHHHHHHHHHcCCeEEEeeecCC
Confidence 9999999999998865432 00000 00001124789999999999999999876643
No 29
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.86 E-value=1.1e-20 Score=172.53 Aligned_cols=183 Identities=14% Similarity=0.176 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHH------HHHHHHHHHHHcC
Q 016921 134 HRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPV------QAQRANALAAARG 205 (380)
Q Consensus 134 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~giD~s~~------~~~~a~~~~~~~~ 205 (380)
....+.+....++..+.+.+ +.+|||||||+|.++..+++..+ .+|+|+|+|+. +++.|++++...+
T Consensus 24 ~~~~~~~~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~ 98 (275)
T 3bkx_A 24 IQRRQTAHRLAIAEAWQVKP-----GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP 98 (275)
T ss_dssp HHHHHHHHHHHHHHHHTCCT-----TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHcCCCC-----CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC
Confidence 56677778888888887654 89999999999999999999853 89999999997 9999999998887
Q ss_pred CCCCeEEEEcC---CCCCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHH
Q 016921 206 LADKVSFQVGD---ALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQE 282 (380)
Q Consensus 206 ~~~~v~~~~~d---~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 282 (380)
+.+++.++++| ...+++++++||+|++..+++|++++..+++.+.++++|||++++.++......+ .........
T Consensus 99 ~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~--~~~~~~~~~ 176 (275)
T 3bkx_A 99 LGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTAL--DQIGHLQAA 176 (275)
T ss_dssp TGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSG--GGHHHHHHH
T ss_pred CCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCch--hhhhHHHHH
Confidence 76789999998 4455677889999999999999999988888888888889999999876543221 111111111
Q ss_pred HHHHHh----h--ccCCCCCCCHHHHHHHHHhCCCcEEEEEecCCCc
Q 016921 283 LLKKIC----D--AYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQNV 323 (380)
Q Consensus 283 ~~~~~~----~--~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~~ 323 (380)
...... . ......+++.+++.++|+++||+++++..+....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~~~~ 223 (275)
T 3bkx_A 177 MIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIVEDPT 223 (275)
T ss_dssp HHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCBCCTT
T ss_pred HHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEecCCC
Confidence 111111 1 1122246799999999999999999988875443
No 30
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.7e-20 Score=172.33 Aligned_cols=160 Identities=21% Similarity=0.272 Sum_probs=121.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCCCCCC------CCcc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQQPFPD------GQFD 228 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~------~~fD 228 (380)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++... +...++.|+++|++++++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 38999999999999999999754 789999999999999999998876 44578999999999988776 8999
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCC--CCHHHHHHHH
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW--CSTADYVKLL 306 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll 306 (380)
+|++..+++|+ ++..+++++.++|||||.|++.++..+.... ...+......+.... ....+.+ ...+.+.+++
T Consensus 116 ~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~w~~p~~~~~~~~l 191 (299)
T 3g5t_A 116 MITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPD-YPEFDDLMIEVPYGK--QGLGPYWEQPGRSRLRNML 191 (299)
T ss_dssp EEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTT-CGGGTTHHHHHHHCT--TTTGGGSCTTHHHHHHTTT
T ss_pred EEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccC-cHHHHHHHHHhccCc--ccccchhhchhhHHHHHhh
Confidence 99999999999 9999999999999999999996654322211 112222222222110 0111112 3456778999
Q ss_pred HhCCC-----cEEEEEecCC
Q 016921 307 QSLSL-----EDIKAEDWSQ 321 (380)
Q Consensus 307 ~~aGf-----~~v~~~~~~~ 321 (380)
+++|| ++++...+..
T Consensus 192 ~~~gfp~~~f~~v~~~~~~~ 211 (299)
T 3g5t_A 192 KDSHLDPELFHDIQVSYFCA 211 (299)
T ss_dssp TTCCCCTTTEEEEEEEEECG
T ss_pred hccCCChHHcCcceEEEecc
Confidence 99999 6777666644
No 31
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.86 E-value=1.4e-20 Score=165.52 Aligned_cols=190 Identities=19% Similarity=0.243 Sum_probs=132.8
Q ss_pred HHHHHHHHHhccchhhHHHhhcccccccccCCCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHH
Q 016921 94 ELKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSS 173 (380)
Q Consensus 94 ~~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~ 173 (380)
.+.+.+.++|+..+..|+..+.. .....+..++..+... .++.+|||||||+|.++
T Consensus 6 ~~~~~~~~~~~~~a~~y~~~~~~--------------------~~~~~~~~~~~~l~~~----~~~~~vLdiG~G~G~~~ 61 (218)
T 3ou2_A 6 GLIESQLSYYRARASEYDATFVP--------------------YMDSAAPAALERLRAG----NIRGDVLELASGTGYWT 61 (218)
T ss_dssp HHHHHHHHHHHHHGGGHHHHHHH--------------------HHTTTHHHHHHHHTTT----TSCSEEEEESCTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhh--------------------HHHHHHHHHHHHHhcC----CCCCeEEEECCCCCHHH
Confidence 34455667787777766653322 1111233444444311 23779999999999999
Q ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCCCCH--HHHHHHHHH
Q 016921 174 RYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDK--SKFVSELAR 251 (380)
Q Consensus 174 ~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r 251 (380)
..+++. +.+|+|+|+|+.+++.+++ .+. .++.++++|+.++ +++++||+|++..+++|+++. ..+++++.+
T Consensus 62 ~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~ 134 (218)
T 3ou2_A 62 RHLSGL-ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRS 134 (218)
T ss_dssp HHHHHH-SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHhc-CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHH
Confidence 999998 8899999999999999987 343 5799999999988 678999999999999999885 899999999
Q ss_pred hcCCCcEEEEEeccCCCCCCCccccchHHHH-HHHHHhhcc-------CCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 016921 252 VTAPAGTIIIVTWCHRDLAPSEESLQPWEQE-LLKKICDAY-------YLPAWCSTADYVKLLQSLSLEDIKAEDW 319 (380)
Q Consensus 252 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 319 (380)
+|||||.+++.++...... ....... ......... ....+++++++.++|+++||+++..+..
T Consensus 135 ~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~ 205 (218)
T 3ou2_A 135 AVAPGGVVEFVDVTDHERR-----LEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDEVH 205 (218)
T ss_dssp HEEEEEEEEEEEECCCC-----------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred HcCCCeEEEEEeCCCCccc-----cchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeeecc
Confidence 9999999999987642211 0000000 000000000 0123569999999999999996655443
No 32
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.85 E-value=9.4e-21 Score=170.91 Aligned_cols=189 Identities=15% Similarity=0.130 Sum_probs=139.8
Q ss_pred HHHHHHHHhccchhhHHHhhcccccccccCCCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHH
Q 016921 95 LKEGIAEFYDESSSLWEDIWGDHMHHGFYEPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSR 174 (380)
Q Consensus 95 ~~~~i~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~ 174 (380)
.++...++|+.....|+...+... .........+..++..+... ++.+|||||||+|.++.
T Consensus 49 ~~~~~~~~w~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~l~~~-----~~~~vLDiG~G~G~~~~ 109 (254)
T 1xtp_A 49 WYGKALEYWRTVPATVSGVLGGMD--------------HVHDVDIEGSRNFIASLPGH-----GTSRALDCGAGIGRITK 109 (254)
T ss_dssp HHHHHHHHHHTSCSSHHHHTTTCG--------------GGHHHHHHHHHHHHHTSTTC-----CCSEEEEETCTTTHHHH
T ss_pred hhhhhhhHHhcCCccccceecCcC--------------ccCHHHHHHHHHHHHhhccc-----CCCEEEEECCCcCHHHH
Confidence 445566777776555554433211 12334444556666666443 38899999999999999
Q ss_pred HHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCCC--CHHHHHHHHHHh
Q 016921 175 YLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMP--DKSKFVSELARV 252 (380)
Q Consensus 175 ~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~--~~~~~l~~~~r~ 252 (380)
.+++....+|+|+|+|+.+++.+++++... .++.++++|+.++++++++||+|++..+++|++ +...+++++.++
T Consensus 110 ~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~ 186 (254)
T 1xtp_A 110 NLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQA 186 (254)
T ss_dssp HTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHh
Confidence 999876668999999999999999887543 479999999999888889999999999999995 478999999999
Q ss_pred cCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 016921 253 TAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 253 LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
|||||++++.+........ .. .......+++.+++.++|+++||+++++....
T Consensus 187 LkpgG~l~i~~~~~~~~~~---~~------------~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 187 LTPNGYIFFKENCSTGDRF---LV------------DKEDSSLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp EEEEEEEEEEEEBC--CCE---EE------------ETTTTEEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred cCCCeEEEEEecCCCcccc---ee------------cccCCcccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 9999999999853321110 00 00011123589999999999999999887654
No 33
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.85 E-value=5.9e-21 Score=182.90 Aligned_cols=154 Identities=20% Similarity=0.217 Sum_probs=122.6
Q ss_pred CCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-----C-C-CCCeEEEEcCCCCC------C
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-----G-L-ADKVSFQVGDALQQ------P 221 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~-----~-~-~~~v~~~~~d~~~~------~ 221 (380)
.++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|++++... | . ..++.|+++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 358899999999999999999875 569999999999999999987654 3 2 25899999999987 8
Q ss_pred CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHH
Q 016921 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (380)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (380)
+++++||+|++..+++|++++..++++++++|||||+|++.++...... ....... . ..........++.++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~------~~~~~~~-~-~~~~~~~~~~~~~~~ 233 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRL------SEAAQQD-P-ILYGECLGGALYLED 233 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCC------CHHHHHC-H-HHHHTTCTTCCBHHH
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecccccc------CHhHhhh-H-HHhhcccccCCCHHH
Confidence 8889999999999999999999999999999999999999986543221 1111111 1 111122234578899
Q ss_pred HHHHHHhCCCcEEEEEe
Q 016921 302 YVKLLQSLSLEDIKAED 318 (380)
Q Consensus 302 ~~~ll~~aGf~~v~~~~ 318 (380)
+.++|+++||+++++..
T Consensus 234 ~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 234 FRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHCCCceEEEEe
Confidence 99999999999886654
No 34
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.85 E-value=1.1e-20 Score=170.80 Aligned_cols=100 Identities=24% Similarity=0.365 Sum_probs=90.2
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++ .+++.++++|++++++++++||+|++..++||
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~ 111 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTGLPPASVDVAIAAQAMHW 111 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCCCCSSCEEEEEECSCCTT
T ss_pred CCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhcccCCcccEEEEeeehhH
Confidence 679999999999999999987 7899999999999987753 15799999999999999999999999999987
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEEEeccCC
Q 016921 239 MPDKSKFVSELARVTAPAGTIIIVTWCHR 267 (380)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~~~~~~~~ 267 (380)
+ ++.+++++++|+|||||.|++..+...
T Consensus 112 ~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 112 F-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp C-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred h-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 7 688999999999999999999886543
No 35
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.84 E-value=2.3e-20 Score=173.41 Aligned_cols=163 Identities=20% Similarity=0.238 Sum_probs=126.7
Q ss_pred CCCEEEEECCCcChHHHHHH-HHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLA-KKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~-~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (380)
++.+|||||||+|.++..++ ... +.+|+|+|+|+.+++.+++++...++.++++++++|+.+++++ ++||+|++..+
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGL 196 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECCh
Confidence 48899999999999999985 333 7899999999999999999998888777899999999999877 99999999999
Q ss_pred cCCCCCHHH---HHHHHHHhcCCCcEEEEEeccCCCCCCCcc-----ccchHHHHHHHHHhh---ccCCCCCCCHHHHHH
Q 016921 236 GEHMPDKSK---FVSELARVTAPAGTIIIVTWCHRDLAPSEE-----SLQPWEQELLKKICD---AYYLPAWCSTADYVK 304 (380)
Q Consensus 236 l~~~~~~~~---~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 304 (380)
++|++++.. +++++.++|||||++++.++.......... .+............. ......+++.+++.+
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRA 276 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHH
Confidence 999988765 799999999999999999876543322111 111111111111111 122234579999999
Q ss_pred HHHhCCCcEEEEEecCC
Q 016921 305 LLQSLSLEDIKAEDWSQ 321 (380)
Q Consensus 305 ll~~aGf~~v~~~~~~~ 321 (380)
+|+++||+++++.....
T Consensus 277 ~l~~aGF~~v~~~~~~~ 293 (305)
T 3ocj_A 277 QLEEAGFTDLRFEDDRA 293 (305)
T ss_dssp HHHHTTCEEEEEECCTT
T ss_pred HHHHCCCEEEEEEcccC
Confidence 99999999999886443
No 36
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.84 E-value=1.6e-20 Score=164.03 Aligned_cols=154 Identities=15% Similarity=0.159 Sum_probs=116.8
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC-----------CCCCe
Q 016921 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG-----------LADKV 210 (380)
Q Consensus 142 ~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------~~~~v 210 (380)
+.+++..+.+.. +.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++..... ...++
T Consensus 11 l~~~~~~l~~~~-----~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v 84 (203)
T 1pjz_A 11 LQQYWSSLNVVP-----GARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGI 84 (203)
T ss_dssp HHHHHHHHCCCT-----TCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSS
T ss_pred HHHHHHhcccCC-----CCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCcc
Confidence 334445444443 889999999999999999997 8899999999999999998764210 12579
Q ss_pred EEEEcCCCCCCCCC-CCccEEEeccccCCCCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHH
Q 016921 211 SFQVGDALQQPFPD-GQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKI 287 (380)
Q Consensus 211 ~~~~~d~~~~~~~~-~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (380)
+++++|+.++++++ ++||+|++..+++|++. ...++++++++|||||++++.........
T Consensus 85 ~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~----------------- 147 (203)
T 1pjz_A 85 EIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL----------------- 147 (203)
T ss_dssp EEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS-----------------
T ss_pred EEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc-----------------
Confidence 99999999988665 79999999999999964 45799999999999999555543322100
Q ss_pred hhccCCCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 016921 288 CDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (380)
Q Consensus 288 ~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 321 (380)
....+...+.+++.+++++ ||+++.++....
T Consensus 148 --~~~~~~~~~~~el~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 148 --LEGPPFSVPQTWLHRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp --SSSCCCCCCHHHHHHTSCS-SEEEEEEEESSC
T ss_pred --cCCCCCCCCHHHHHHHhcC-CcEEEEeccccc
Confidence 0011112578999999998 999888776554
No 37
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.84 E-value=2.9e-20 Score=165.91 Aligned_cols=145 Identities=17% Similarity=0.242 Sum_probs=122.0
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....+...++.|+++|+.+++ ++++||+|++..+++|
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhc
Confidence 459999999999999999875 78999999999999999999876555567999999999976 4579999999999999
Q ss_pred CC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEE
Q 016921 239 MP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (380)
Q Consensus 239 ~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 316 (380)
++ +...+++++.++|||||.+++.++....... ..+..++.+++.++|+++||+++++
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDHVG--------------------GPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCS--------------------CSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCC--------------------CCCccCCHHHHHHHHHHcCCeEEEE
Confidence 98 8899999999999999999998865432110 1112267899999999999999999
Q ss_pred EecCCCcCC
Q 016921 317 EDWSQNVAP 325 (380)
Q Consensus 317 ~~~~~~~~~ 325 (380)
+.....+..
T Consensus 205 ~~~~~~~~~ 213 (235)
T 3lcc_A 205 EENPHAIPT 213 (235)
T ss_dssp EECTTCCTT
T ss_pred EecCCcccc
Confidence 888776543
No 38
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.84 E-value=9.7e-22 Score=190.53 Aligned_cols=162 Identities=16% Similarity=0.201 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCe-EEE
Q 016921 135 RAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKV-SFQ 213 (380)
Q Consensus 135 ~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v-~~~ 213 (380)
.....++.+.++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +.+... .+.
T Consensus 89 ~~~~~~~~~~l~~~~~~~~-----~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~ 158 (416)
T 4e2x_A 89 REHFAMLARDFLATELTGP-----DPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDFFE 158 (416)
T ss_dssp HHHHHHHHHHHHHTTTCSS-----SCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSCCS
T ss_pred HHHHHHHHHHHHHHhCCCC-----CCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceeeec
Confidence 3445667777777776544 889999999999999999986 78999999999999998864 322111 122
Q ss_pred EcCCCCCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHH-Hhhcc-
Q 016921 214 VGDALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK-ICDAY- 291 (380)
Q Consensus 214 ~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 291 (380)
..+...+++++++||+|++.++++|++++..++++++++|||||++++...... ..... .....
T Consensus 159 ~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~--------------~~~~~~~~~~~~ 224 (416)
T 4e2x_A 159 KATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLG--------------DIVAKTSFDQIF 224 (416)
T ss_dssp HHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHH--------------HHHHHTCGGGCS
T ss_pred hhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChH--------------Hhhhhcchhhhh
Confidence 334444556678999999999999999999999999999999999999764211 01110 01111
Q ss_pred -CCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 016921 292 -YLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 292 -~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
....+++.+++.++++++||++++++.+.
T Consensus 225 ~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 225 DEHFFLFSATSVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp TTCCEECCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred hhhhhcCCHHHHHHHHHHcCCEEEEEEEcc
Confidence 11135799999999999999999998765
No 39
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.84 E-value=8.1e-20 Score=168.60 Aligned_cols=165 Identities=19% Similarity=0.187 Sum_probs=120.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+++....+|+|+|+|+.+++.|+++....++..++.++++|+.+.++ ++++||+|++..++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 38899999999999999988863459999999999999999999887776689999999999887 57899999999999
Q ss_pred CC----CCCHHHHHHHHHHhcCCCcEEEEEeccCCCCC-------CCccccchHHH--HHHHH-Hhhcc------CC---
Q 016921 237 EH----MPDKSKFVSELARVTAPAGTIIIVTWCHRDLA-------PSEESLQPWEQ--ELLKK-ICDAY------YL--- 293 (380)
Q Consensus 237 ~~----~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-------~~~~~~~~~~~--~~~~~-~~~~~------~~--- 293 (380)
+| ..+...+++++.++|||||.+++..+...... .....+..... ..+.. ....+ ..
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 223 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNC 223 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSE
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCC
Confidence 77 35678999999999999999999875321000 00000000000 00000 00000 00
Q ss_pred -CCCCCHHHHHHHHHhCCCcEEEEEecCCC
Q 016921 294 -PAWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 294 -~~~~~~~~~~~ll~~aGf~~v~~~~~~~~ 322 (380)
..+++++++.++|+++||++++...+...
T Consensus 224 ~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~ 253 (298)
T 1ri5_A 224 IEYFVDFTRMVDGFKRLGLSLVERKGFIDF 253 (298)
T ss_dssp EEECCCHHHHHHHHHTTTEEEEEEEEHHHH
T ss_pred cccccCHHHHHHHHHHcCCEEEEecCHHHH
Confidence 13568999999999999999998766543
No 40
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.83 E-value=7.3e-20 Score=162.81 Aligned_cols=159 Identities=22% Similarity=0.306 Sum_probs=123.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCCCCCCCCccEEEec
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQPFPDGQFDLVWSM 233 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~fD~V~~~ 233 (380)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....++ ..++.+..+|+..+++++++||+|++.
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 3889999999999999999987 88999999999999999998876654 236899999999998888999999999
Q ss_pred cccCCCCCHH---HHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhc--c-----------CCCCCC
Q 016921 234 ESGEHMPDKS---KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA--Y-----------YLPAWC 297 (380)
Q Consensus 234 ~~l~~~~~~~---~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~ 297 (380)
.+++|++++. .+++++.++|||||.+++.++...... ..+.......+...... + ....++
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHL---KLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTS---HHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhH---HHHHHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 9999999887 899999999999999999987543221 11111111111110000 0 001257
Q ss_pred CHHHHHHHHHhCCCcEEEEEecC
Q 016921 298 STADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 298 ~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
+.+++.++|+++||+++++....
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~~~~ 208 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFRVKE 208 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEecc
Confidence 89999999999999999886543
No 41
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.83 E-value=2.3e-20 Score=167.21 Aligned_cols=141 Identities=18% Similarity=0.185 Sum_probs=115.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCCccEEEeccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~~~~ 235 (380)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ +.++.+|+.+. ++++++||+|++..+
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~~~ 110 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMISHF 110 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEESC
T ss_pred CCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEECCc
Confidence 4789999999999999999987 88999999999999998753 78899998875 778899999999999
Q ss_pred cCCCC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcE
Q 016921 236 GEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (380)
Q Consensus 236 l~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 313 (380)
++|++ +...+++++.++|||||++++..+.... .. . +...........+++.+++.++++++||++
T Consensus 111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-------~~----~-~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 111 VEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS-------LY----S-LINFYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS-------HH----H-HHHHTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch-------hH----H-HHHHhcCccccccCCHHHHHHHHHHCCCeE
Confidence 99998 4599999999999999999998754221 11 1 111111122224578999999999999999
Q ss_pred EEEEecC
Q 016921 314 IKAEDWS 320 (380)
Q Consensus 314 v~~~~~~ 320 (380)
+++..+.
T Consensus 179 ~~~~~~~ 185 (240)
T 3dli_A 179 VKIEFFE 185 (240)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9988776
No 42
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.83 E-value=7.6e-20 Score=160.43 Aligned_cols=138 Identities=15% Similarity=0.159 Sum_probs=114.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ++.+..+|+..++ ++++||+|++..+++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 113 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-AIDAYDAVWAHACLL 113 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-CCSCEEEEEECSCGG
T ss_pred CCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-CCCcEEEEEecCchh
Confidence 3789999999999999999987 889999999999999999876 4678899999988 789999999999999
Q ss_pred CCC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC-CcEE
Q 016921 238 HMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS-LEDI 314 (380)
Q Consensus 238 ~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-f~~v 314 (380)
|++ +...+++++.++|||||++++......... .... .....+++.+++.++|+++| |+++
T Consensus 114 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~--------------~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 114 HVPRDELADVLKLIWRALKPGGLFYASYKSGEGEG--RDKL--------------ARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCE--ECTT--------------SCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccc--cccc--------------chhccCCCHHHHHHHHHhCCCcEEE
Confidence 998 778999999999999999999864332210 0000 00113578999999999999 9999
Q ss_pred EEEecC
Q 016921 315 KAEDWS 320 (380)
Q Consensus 315 ~~~~~~ 320 (380)
++....
T Consensus 178 ~~~~~~ 183 (211)
T 3e23_A 178 AVESSE 183 (211)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 887554
No 43
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.82 E-value=2.6e-19 Score=162.89 Aligned_cols=160 Identities=16% Similarity=0.159 Sum_probs=125.8
Q ss_pred hhHHHHHHHHHHHhccchhhHHHhhccccccccc--CCCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECC
Q 016921 90 AAARELKEGIAEFYDESSSLWEDIWGDHMHHGFY--EPDSSVSVSDHRAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGC 167 (380)
Q Consensus 90 ~~~~~~~~~i~~~yd~~~~~y~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGc 167 (380)
..+..+.+.+.++|+.....|+..|+.+++.+.- ....... ......++++.-+..+.+++ +.+||||||
T Consensus 60 ~~~~~l~~~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~fp---y~~~~~~l~~~E~~la~l~~-----g~rVLDIGc 131 (298)
T 3fpf_A 60 AEMNHALSLIRKFYVNLGMKLEMEKAQEVIESDSPWETLRSFY---FYPRYLELLKNEAALGRFRR-----GERAVFIGG 131 (298)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHTST---THHHHHHHHHHHHHHTTCCT-----TCEEEEECC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHhhccCC---CcccHHHHHHHHHHHcCCCC-----cCEEEEECC
Confidence 4578899999999999999999999998855410 0000011 11223445555555566654 999999999
Q ss_pred CcChHHHH-HHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCCCCCHHHHH
Q 016921 168 GIGGSSRY-LAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEHMPDKSKFV 246 (380)
Q Consensus 168 GtG~~~~~-l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l 246 (380)
|+|.++.. +++..+++|+|+|+|+.|++.|+++++..|+ .+++|+++|+.+++ +++||+|++... .+++.+++
T Consensus 132 G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l 205 (298)
T 3fpf_A 132 GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVF 205 (298)
T ss_dssp CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHH
T ss_pred CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHH
Confidence 99977644 4543489999999999999999999998888 79999999998875 689999998654 57899999
Q ss_pred HHHHHhcCCCcEEEEEe
Q 016921 247 SELARVTAPAGTIIIVT 263 (380)
Q Consensus 247 ~~~~r~LkpgG~l~~~~ 263 (380)
+++.++|||||+|++.+
T Consensus 206 ~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 206 RNIHRYVDTETRIIYRT 222 (298)
T ss_dssp HHHHHHCCTTCEEEEEE
T ss_pred HHHHHHcCCCcEEEEEc
Confidence 99999999999999976
No 44
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.82 E-value=1.5e-19 Score=163.13 Aligned_cols=160 Identities=15% Similarity=0.151 Sum_probs=118.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++....+|+|+|+|+.+++.++++.. ..++.++++|+.++++++++||+|++..+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 119 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAYNVVLSSLALH 119 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCeEEEEEchhhh
Confidence 489999999999999999998733399999999999999998764 3589999999999988889999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCcc--------c--cchHHHHHHHH-Hhh-c----cCCCCCCCHHH
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE--------S--LQPWEQELLKK-ICD-A----YYLPAWCSTAD 301 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~-~~~-~----~~~~~~~~~~~ 301 (380)
|++++..+++++.++|||||.+++............. . ...+. ..+.. ... . .......+.++
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~ 198 (253)
T 3g5l_A 120 YIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVD-RYFNESMRTSHFLGEDVQKYHRTVTT 198 (253)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEEC-CTTCCCEEEEEETTEEEEEECCCHHH
T ss_pred hhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEec-cccccceEEEeeccccCccEecCHHH
Confidence 9999999999999999999999997542110000000 0 00000 00000 000 0 00000138999
Q ss_pred HHHHHHhCCCcEEEEEecCCC
Q 016921 302 YVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 302 ~~~ll~~aGf~~v~~~~~~~~ 322 (380)
+.++|+++||+++++.+....
T Consensus 199 ~~~~l~~aGF~~~~~~e~~~~ 219 (253)
T 3g5l_A 199 YIQTLLKNGFQINSVIEPEPA 219 (253)
T ss_dssp HHHHHHHTTEEEEEEECCCCC
T ss_pred HHHHHHHcCCeeeeeecCCCc
Confidence 999999999999998876543
No 45
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.82 E-value=2.6e-19 Score=158.12 Aligned_cols=139 Identities=21% Similarity=0.213 Sum_probs=111.3
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||||||+|.++..+++. +|+|+|+.+++.++++ ++.++++|+.++++++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 678999999999999888653 9999999999998874 588999999998888889999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhh---ccCCCCCCCHHHHHHHHHhCCCcEEE
Q 016921 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD---AYYLPAWCSTADYVKLLQSLSLEDIK 315 (380)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ll~~aGf~~v~ 315 (380)
++++..+++++.++|+|||.+++.++.... .+ ......... ......+++.+++.++|+++||++++
T Consensus 115 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 115 VDDPERALKEAYRILKKGGYLIVGIVDRES---------FL-GREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECSSS---------HH-HHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEeCCcc---------HH-HHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 999999999999999999999998753211 11 111111111 11122457999999999999999998
Q ss_pred EEecC
Q 016921 316 AEDWS 320 (380)
Q Consensus 316 ~~~~~ 320 (380)
+....
T Consensus 185 ~~~~~ 189 (219)
T 1vlm_A 185 VVQTL 189 (219)
T ss_dssp EEEEC
T ss_pred Eeccc
Confidence 76554
No 46
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.82 E-value=2e-20 Score=165.53 Aligned_cols=152 Identities=20% Similarity=0.307 Sum_probs=112.3
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCC-CCCccEEEecc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFP-DGQFDLVWSME 234 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~-~~~fD~V~~~~ 234 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ .++.+...|+.++ ++. +++||+|++..
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEEECc
Confidence 789999999999999999987 88999999999999999875 3577888888775 433 45599999999
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhcc--CCCCCCCHHHHHHHHHhCCCc
Q 016921 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAY--YLPAWCSTADYVKLLQSLSLE 312 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~aGf~ 312 (380)
+++ ..++..++++++++|||||++++.++........ .....+....+....... ....+++.+++.++|+++||+
T Consensus 125 ~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 202 (227)
T 3e8s_A 125 ALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADG-DYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLR 202 (227)
T ss_dssp CCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTT-CCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEE
T ss_pred hhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCcc-ccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCe
Confidence 999 7889999999999999999999998754332211 000000000000000000 001246899999999999999
Q ss_pred EEEEEecC
Q 016921 313 DIKAEDWS 320 (380)
Q Consensus 313 ~v~~~~~~ 320 (380)
++++....
T Consensus 203 ~~~~~~~~ 210 (227)
T 3e8s_A 203 LVSLQEPQ 210 (227)
T ss_dssp EEEEECCC
T ss_pred EEEEecCC
Confidence 99987643
No 47
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.81 E-value=2.1e-18 Score=164.37 Aligned_cols=164 Identities=20% Similarity=0.245 Sum_probs=129.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
....++...+... ..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++|+.+|+.
T Consensus 190 ~~~~l~~~~~~~~-----~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~- 262 (369)
T 3gwz_A 190 EAGQVAAAYDFSG-----AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF- 262 (369)
T ss_dssp HHHHHHHHSCCTT-----CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-
T ss_pred hHHHHHHhCCCcc-----CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-
Confidence 3455666665543 7899999999999999999987 779999999 9999999999998888889999999998
Q ss_pred CCCCCCCccEEEeccccCCCCCHH--HHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCC
Q 016921 220 QPFPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (380)
.+++. .||+|++..+++++++.. +++++++++|||||+|++.+...+...... ....+... ..... ...+
T Consensus 263 ~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~----~~~~d~~~-~~~~~--g~~~ 334 (369)
T 3gwz_A 263 ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS----TLFVDLLL-LVLVG--GAER 334 (369)
T ss_dssp TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH----HHHHHHHH-HHHHS--CCCB
T ss_pred CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc----hhHhhHHH-HhhcC--CccC
Confidence 45555 899999999999998875 799999999999999999997654422111 11111111 11111 2247
Q ss_pred CHHHHHHHHHhCCCcEEEEEec
Q 016921 298 STADYVKLLQSLSLEDIKAEDW 319 (380)
Q Consensus 298 ~~~~~~~ll~~aGf~~v~~~~~ 319 (380)
+.++|.++|+++||+++++...
T Consensus 335 t~~e~~~ll~~aGf~~~~~~~~ 356 (369)
T 3gwz_A 335 SESEFAALLEKSGLRVERSLPC 356 (369)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEC
T ss_pred CHHHHHHHHHHCCCeEEEEEEC
Confidence 8999999999999999998763
No 48
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.81 E-value=1.2e-19 Score=167.38 Aligned_cols=150 Identities=15% Similarity=0.220 Sum_probs=108.7
Q ss_pred CCCEEEEECCCcChHHHHHH----HHc-CCE--EEEEeCCHHHHHHHHHHHHHcCCCCCeEE--EEcCCCCCC------C
Q 016921 158 RPKNVVDVGCGIGGSSRYLA----KKF-GAK--CQGITLSPVQAQRANALAAARGLADKVSF--QVGDALQQP------F 222 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~----~~~-~~~--v~giD~s~~~~~~a~~~~~~~~~~~~v~~--~~~d~~~~~------~ 222 (380)
++.+|||||||+|.++..++ ... +.. ++|+|+|+.|++.|++++...+...++.+ ..+++++++ +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 47899999999998765433 332 454 49999999999999999865422245554 455555432 5
Q ss_pred CCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccC---CCCCCCH
Q 016921 223 PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY---LPAWCST 299 (380)
Q Consensus 223 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 299 (380)
++++||+|++..+++|++|+.+++++++++|||||++++...... . .+ ...+........ ...+++.
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~------~---~~-~~~~~~~~~~~~~~~~~~~~~~ 201 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGS------S---GW-DKLWKKYGSRFPQDDLCQYITS 201 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTT------S---HH-HHHHHHHGGGSCCCTTCCCCCH
T ss_pred CCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCC------c---cH-HHHHHHHHHhccCCCcccCCCH
Confidence 678999999999999999999999999999999999999864321 1 11 112222222111 2246789
Q ss_pred HHHHHHHHhCCCcEEEEE
Q 016921 300 ADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 300 ~~~~~ll~~aGf~~v~~~ 317 (380)
+++.++|+++||+++...
T Consensus 202 ~~~~~~l~~aGf~~~~~~ 219 (292)
T 2aot_A 202 DDLTQMLDNLGLKYECYD 219 (292)
T ss_dssp HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHCCCceEEEE
Confidence 999999999999987643
No 49
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.81 E-value=7.7e-19 Score=165.02 Aligned_cols=152 Identities=19% Similarity=0.133 Sum_probs=121.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++|+.+|+. .+++. +||+|++..++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhh
Confidence 47899999999999999999987 789999999 9999999999998888789999999997 35554 89999999999
Q ss_pred CCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEE
Q 016921 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (380)
Q Consensus 237 ~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v 314 (380)
||+++. .+++++++++|||||+|++.+...+... . .. ..+... ..... ...++.++|.++|+++||+++
T Consensus 246 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~----~-~~-~~d~~~-~~~~~--~~~~t~~e~~~ll~~aGf~~~ 316 (332)
T 3i53_A 246 HDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEH----A-GT-GMDLRM-LTYFG--GKERSLAELGELAAQAGLAVR 316 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-------C-CH-HHHHHH-HHHHS--CCCCCHHHHHHHHHHTTEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCC----c-cH-HHHHHH-HhhCC--CCCCCHHHHHHHHHHCCCEEE
Confidence 999885 7899999999999999999997654431 1 11 111111 11111 124689999999999999999
Q ss_pred EEEecCC
Q 016921 315 KAEDWSQ 321 (380)
Q Consensus 315 ~~~~~~~ 321 (380)
++.....
T Consensus 317 ~~~~~~~ 323 (332)
T 3i53_A 317 AAHPISY 323 (332)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 9876643
No 50
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.81 E-value=7.8e-19 Score=166.77 Aligned_cols=169 Identities=20% Similarity=0.259 Sum_probs=130.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
.+..++..+.... +.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...+++++++++.+|+.+
T Consensus 178 ~~~~l~~~~~~~~-----~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 251 (359)
T 1x19_A 178 AIQLLLEEAKLDG-----VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYK 251 (359)
T ss_dssp HHHHHHHHCCCTT-----CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTT
T ss_pred hHHHHHHhcCCCC-----CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCcccc
Confidence 4456666665443 8899999999999999999987 679999999 99999999999888887789999999998
Q ss_pred CCCCCCCccEEEeccccCCCCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCC
Q 016921 220 QPFPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (380)
.++++. |+|++..+++|+++ ...++++++++|||||++++.++..+.. ....+.... ..+...........++
T Consensus 252 ~~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~~~~~~~~-~~~~~~~~g~~~~~~~ 326 (359)
T 1x19_A 252 ESYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP--ENPNFDYLS-HYILGAGMPFSVLGFK 326 (359)
T ss_dssp SCCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT--TSCCHHHHH-HHGGGGGSSCCCCCCC
T ss_pred CCCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC--CCchHHHHH-HHHHhcCCCCcccCCC
Confidence 776543 99999999999987 7889999999999999999998765432 111111111 1111011111222357
Q ss_pred CHHHHHHHHHhCCCcEEEEEecC
Q 016921 298 STADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 298 ~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
+.+++.++|+++||+++++..+.
T Consensus 327 t~~e~~~ll~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 327 EQARYKEILESLGYKDVTMVRKY 349 (359)
T ss_dssp CGGGHHHHHHHHTCEEEEEEEET
T ss_pred CHHHHHHHHHHCCCceEEEEecC
Confidence 99999999999999999887654
No 51
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=2.1e-19 Score=158.40 Aligned_cols=148 Identities=16% Similarity=0.132 Sum_probs=111.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEEcCCCCCCCCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLAD----KVSFQVGDALQQPFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~~~fD~V~~~ 233 (380)
+.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++...+++. ++.++++|+...+.++++||+|++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 7899999999999999999875 3799999999999999999987766653 8999999998777667899999999
Q ss_pred cccCCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHH----HHHH
Q 016921 234 ESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYV----KLLQ 307 (380)
Q Consensus 234 ~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ll~ 307 (380)
.+++|++++ ..+++++.++|||||.+++....... ..+.. ..............++.+++. .+++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 110 EVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYN-----VKFAN----LPAGKLRHKDHRFEWTRSQFQNWANKITE 180 (217)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHH-----HHTC---------------CCSCBCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccc-----hhhcc----cccccccccccccccCHHHHHHHHHHHHH
Confidence 999999865 89999999999999977776531000 00000 000000001111236889998 8899
Q ss_pred hCCCcEEE
Q 016921 308 SLSLEDIK 315 (380)
Q Consensus 308 ~aGf~~v~ 315 (380)
++||+++.
T Consensus 181 ~~Gf~v~~ 188 (217)
T 3jwh_A 181 RFAYNVQF 188 (217)
T ss_dssp HSSEEEEE
T ss_pred HcCceEEE
Confidence 99998754
No 52
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.81 E-value=1.6e-19 Score=152.86 Aligned_cols=134 Identities=22% Similarity=0.330 Sum_probs=113.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++.. .+|+|+|+++.+++.++++ .+++.+..+| .++++++||+|++..+++
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~D~v~~~~~l~ 86 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSVDFILFANSFH 86 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCEEEEEEESCST
T ss_pred CCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCceEEEEEccchh
Confidence 37899999999999999999875 4999999999999999887 2579999999 566788999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 317 (380)
|++++..+++++.++|||||++++.++.......... ....++.+++.++|+ ||++++..
T Consensus 87 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 87 DMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPP------------------LSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp TCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSC------------------GGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred cccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCch------------------HhhhcCHHHHHHHHh--CcEEEEcc
Confidence 9999999999999999999999999876543221110 012368999999999 99999988
Q ss_pred ecCC
Q 016921 318 DWSQ 321 (380)
Q Consensus 318 ~~~~ 321 (380)
.+..
T Consensus 147 ~~~~ 150 (170)
T 3i9f_A 147 NPTP 150 (170)
T ss_dssp CSST
T ss_pred CCCC
Confidence 7764
No 53
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.80 E-value=1.6e-18 Score=162.88 Aligned_cols=170 Identities=13% Similarity=0.154 Sum_probs=129.8
Q ss_pred HHHHHHHHcCC--CCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC
Q 016921 141 MIEETLRFAGV--SEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (380)
Q Consensus 141 ~~~~ll~~~~~--~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 217 (380)
.+..++..+.. . ++.+|||||||+|.++..+++.+ +.+++++|++ .+++.|++++...++.++++++.+|+
T Consensus 151 ~~~~~~~~~~~~~~-----~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~ 224 (335)
T 2r3s_A 151 PAQLIAQLVNENKI-----EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSA 224 (335)
T ss_dssp HHHHHHHHHTC--C-----CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCT
T ss_pred hHHHHHHhcccccC-----CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEeccc
Confidence 34455555554 3 37899999999999999999987 6899999999 99999999998888777899999999
Q ss_pred CCCCCCCCCccEEEeccccCCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhh-ccCCC
Q 016921 218 LQQPFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD-AYYLP 294 (380)
Q Consensus 218 ~~~~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 294 (380)
.+.+++. .||+|++..+++|+++. ..++++++++|+|||++++.++........ . .....+..... .....
T Consensus 225 ~~~~~~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~---~~~~~~~~~~~~~~~~~ 298 (335)
T 2r3s_A 225 FEVDYGN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRIT--P---PDAAAFSLVMLATTPNG 298 (335)
T ss_dssp TTSCCCS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSC--S---HHHHHHHHHHHHHSSSC
T ss_pred ccCCCCC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCC--c---hHHHHHHHHHHeeCCCC
Confidence 8877654 49999999999999654 799999999999999999999765432111 1 11111111111 11122
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEecCCC
Q 016921 295 AWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 295 ~~~~~~~~~~ll~~aGf~~v~~~~~~~~ 322 (380)
..++.+++.++|+++||+++++......
T Consensus 299 ~~~t~~~~~~ll~~aGf~~~~~~~~~~~ 326 (335)
T 2r3s_A 299 DAYTFAEYESMFSNAGFSHSQLHSLPTT 326 (335)
T ss_dssp CCCCHHHHHHHHHHTTCSEEEEECCTTS
T ss_pred CcCCHHHHHHHHHHCCCCeeeEEECCCC
Confidence 3579999999999999999998776543
No 54
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.80 E-value=4.6e-19 Score=158.70 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=93.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecc-cc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME-SG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l 236 (380)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+. ++.++++|+.+++++ ++||+|++.. ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN-RKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS-CCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc-CCceEEEEcCccc
Confidence 3789999999999999999987 78999999999999999999877664 799999999998876 8999999998 99
Q ss_pred CCC---CCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 237 EHM---PDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 237 ~~~---~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+ .+...+++++.++|||||.+++...
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999 5678999999999999999998653
No 55
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.80 E-value=1e-19 Score=168.42 Aligned_cols=173 Identities=13% Similarity=0.113 Sum_probs=123.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCeEEEEcCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA--DKVSFQVGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~ 218 (380)
.+..++..+... +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++. .++.++++|+.
T Consensus 71 ~~~~~~~~~~~~------~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 71 EAREFATRTGPV------SGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHCCC------CSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred HHHHHHHhhCCC------CCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 344455555432 459999999999999999987 889999999999999999998765532 57999999999
Q ss_pred CCCCCCCCccEEEec-cccCCCC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCcc----ccchHHHHHHHHHhhc-
Q 016921 219 QQPFPDGQFDLVWSM-ESGEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE----SLQPWEQELLKKICDA- 290 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~-~~l~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~- 290 (380)
++++ +++||+|++. .+++|++ +...+++++.++|||||.|++..+.......... .+.......+. +...
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 221 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYV-LHVRH 221 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC--------------CCEEE
T ss_pred cCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEE-EEEEE
Confidence 9887 6899999865 5666665 3589999999999999999998865432110000 00000000000 0000
Q ss_pred ------------------------cCCCCCCCHHHHHHHHHhCCCcEEEEEecCCC
Q 016921 291 ------------------------YYLPAWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 291 ------------------------~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~ 322 (380)
....++++.+++.++|+++||+++++..+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~ 277 (299)
T 3g2m_A 222 LPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASG 277 (299)
T ss_dssp EEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTT
T ss_pred eccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCC
Confidence 00012469999999999999999999988754
No 56
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.80 E-value=8.1e-19 Score=153.79 Aligned_cols=134 Identities=19% Similarity=0.228 Sum_probs=105.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+ +. +|+|+|+|+.+++.++++. .++.++++|+.++++++++||+|++..++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 105 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFTTL 105 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEESCT
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcChh
Confidence 3789999999999998877 55 9999999999999998865 47899999999998888999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHh-hccCCCCCCCHHHHHHHHHhCC
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC-DAYYLPAWCSTADYVKLLQSLS 310 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~aG 310 (380)
+|++++..+++++.++|||||.+++.++.... ..... ........ ..+...++++.+++.++|+ |
T Consensus 106 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 106 EFVEDVERVLLEARRVLRPGGALVVGVLEALS------PWAAL-YRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp TTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS------HHHHH-HHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC------cHHHH-HHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 99999999999999999999999998854321 00000 01111111 1111234689999999999 7
No 57
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.80 E-value=5.3e-19 Score=168.11 Aligned_cols=157 Identities=17% Similarity=0.203 Sum_probs=120.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCCccEEEeccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~~~~ 235 (380)
..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++|+.+|+.+. |++ ++||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~v 257 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQF 257 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEech
Confidence 6899999999999999999987 789999999 999999999998777777899999999886 465 78999999999
Q ss_pred cCCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcE
Q 016921 236 GEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (380)
Q Consensus 236 l~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 313 (380)
+|++++. ..++++++++|||||+|++.+...+........+...... +............++.+++.++|+++||++
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~ 336 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQIS-LYFTAMANGNSKMFHSDDLIRCIENAGLEV 336 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHH-HHHHHSSCSSCCSCCHHHHHHHHHTTTEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhh-hhHHhhhCCCCcccCHHHHHHHHHHcCCeE
Confidence 9999765 5789999999999999999997554322110000000000 000011112223579999999999999999
Q ss_pred EEEEe
Q 016921 314 IKAED 318 (380)
Q Consensus 314 v~~~~ 318 (380)
+++..
T Consensus 337 v~~~~ 341 (363)
T 3dp7_A 337 EEIQD 341 (363)
T ss_dssp SCCCC
T ss_pred EEEEe
Confidence 87653
No 58
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.80 E-value=1.7e-18 Score=153.35 Aligned_cols=146 Identities=18% Similarity=0.251 Sum_probs=116.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--CCCCCCCccEEEeccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ--QPFPDGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~fD~V~~~~~ 235 (380)
++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++. ..+..+|+.+ .++++++||+|++..+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGDV 102 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEESC
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECCh
Confidence 4789999999999999999988 899999999999999887632 4789999987 5677789999999999
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccC----------CCCCCCHHHHHHH
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY----------LPAWCSTADYVKL 305 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l 305 (380)
++|++++..+++++.++|+|||.+++....... ... .... ....+. ...+++.+++.++
T Consensus 103 l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~-------~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (230)
T 3cc8_A 103 LEHLFDPWAVIEKVKPYIKQNGVILASIPNVSH-------ISV-LAPL---LAGNWTYTEYGLLDKTHIRFFTFNEMLRM 171 (230)
T ss_dssp GGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTS-------HHH-HHHH---HTTCCCCBSSSTTBTTCCCCCCHHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcch-------HHH-HHHH---hcCCceeccCCCCCcceEEEecHHHHHHH
Confidence 999999999999999999999999998743211 110 0011 111111 1135799999999
Q ss_pred HHhCCCcEEEEEecCCCc
Q 016921 306 LQSLSLEDIKAEDWSQNV 323 (380)
Q Consensus 306 l~~aGf~~v~~~~~~~~~ 323 (380)
|+++||+++++..+....
T Consensus 172 l~~~Gf~~~~~~~~~~~~ 189 (230)
T 3cc8_A 172 FLKAGYSISKVDRVYVDH 189 (230)
T ss_dssp HHHTTEEEEEEEEEECCC
T ss_pred HHHcCCeEEEEEecccCh
Confidence 999999999988776554
No 59
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.80 E-value=3e-19 Score=157.57 Aligned_cols=149 Identities=17% Similarity=0.140 Sum_probs=112.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEEcCCCCCCCCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLAD----KVSFQVGDALQQPFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~~~~~~~fD~V~~~ 233 (380)
+.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++...+++. +++++++|+...+.++++||+|++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 109 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVI 109 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEH
Confidence 7899999999999999999875 3799999999999999999987666543 8999999998877777899999999
Q ss_pred cccCCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHH----HHHH
Q 016921 234 ESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYV----KLLQ 307 (380)
Q Consensus 234 ~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ll~ 307 (380)
.+++|++++ ..+++++.++|||||.+++......+ ..+...... ..........++.+++. ++++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~l~~ 180 (219)
T 3jwg_A 110 EVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYN-----FHYGNLFEG----NLRHRDHRFEWTRKEFQTWAVKVAE 180 (219)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGG-----GCCCCT---------GGGCCTTSBCHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhh-----hhhcccCcc----cccccCceeeecHHHHHHHHHHHHH
Confidence 999999865 79999999999999976665532111 001000000 00111112236889998 8899
Q ss_pred hCCCcEEEE
Q 016921 308 SLSLEDIKA 316 (380)
Q Consensus 308 ~aGf~~v~~ 316 (380)
++||++...
T Consensus 181 ~~Gf~v~~~ 189 (219)
T 3jwg_A 181 KYGYSVRFL 189 (219)
T ss_dssp HHTEEEEEE
T ss_pred HCCcEEEEE
Confidence 999976544
No 60
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.80 E-value=1e-19 Score=165.22 Aligned_cols=99 Identities=23% Similarity=0.352 Sum_probs=89.2
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecc-ccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME-SGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l~ 237 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++. .++.++++|+.++++ +++||+|++.. +++
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~ 122 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRN------PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIG 122 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTCCC-SCCEEEEEECTTGGG
T ss_pred CCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChHHCCc-cCCcCEEEEcCchhh
Confidence 689999999999999999987 789999999999999998865 379999999999887 68999999998 999
Q ss_pred CCC---CHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 238 HMP---DKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 238 ~~~---~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
|++ +...+++++.++|||||.+++.++.
T Consensus 123 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 123 HLAGQAELDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp GSCHHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 996 5568899999999999999997653
No 61
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.80 E-value=1.3e-18 Score=155.71 Aligned_cols=154 Identities=19% Similarity=0.323 Sum_probs=116.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++... .++.++++|+.++++++++||+|++..++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 117 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFDLAYSSLAL 117 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred CCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCceEEEEeccc
Confidence 3789999999999999999987 66 999999999999999876532 36999999999988888999999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCcc------------ccchH------HHHHHHHHhhccCCCCCCC
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE------------SLQPW------EQELLKKICDAYYLPAWCS 298 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~------------~~~~~------~~~~~~~~~~~~~~~~~~~ 298 (380)
+|++++..+++++.++|||||.+++.+........... ..... ...++. . .....+++
T Consensus 118 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~t 193 (243)
T 3bkw_A 118 HYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLA---K-GVVKHHRT 193 (243)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHH---H-SCCEEECC
T ss_pred cccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeecc---C-ceEEEecc
Confidence 99999999999999999999999998743110000000 00000 000010 0 00111258
Q ss_pred HHHHHHHHHhCCCcEEEEEecC
Q 016921 299 TADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 299 ~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
.+++.++|+++||+++++....
T Consensus 194 ~~~~~~~l~~aGF~~~~~~~~~ 215 (243)
T 3bkw_A 194 VGTTLNALIRSGFAIEHVEEFC 215 (243)
T ss_dssp HHHHHHHHHHTTCEEEEEEECC
T ss_pred HHHHHHHHHHcCCEeeeeccCC
Confidence 9999999999999999987654
No 62
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.79 E-value=3.8e-18 Score=162.85 Aligned_cols=166 Identities=23% Similarity=0.235 Sum_probs=124.5
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (380)
..++..+.+. ++.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++++.+|+.+ +
T Consensus 172 ~~~~~~~~~~-----~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 244 (374)
T 1qzz_A 172 EAPADAYDWS-----AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-P 244 (374)
T ss_dssp HHHHHTSCCT-----TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C
T ss_pred HHHHHhCCCC-----CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-c
Confidence 3445554443 37899999999999999999987 689999999 99999999999888887799999999976 4
Q ss_pred CCCCCccEEEeccccCCCCCHH--HHHHHHHHhcCCCcEEEEEec--cCCCCCCCccccchHHHHHHHHHhhccCCCCCC
Q 016921 222 FPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTW--CHRDLAPSEESLQPWEQELLKKICDAYYLPAWC 297 (380)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (380)
++. .||+|++..+++|+++.. .++++++++|||||++++.++ ..+... . ......+............+
T Consensus 245 ~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~ 317 (374)
T 1qzz_A 245 LPV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGA--D----RFFSTLLDLRMLTFMGGRVR 317 (374)
T ss_dssp CSC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------------HHHHHHHHHHHHHHHSCCCC
T ss_pred CCC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCC--C----cchhhhcchHHHHhCCCcCC
Confidence 443 499999999999998764 899999999999999999987 432210 0 11111111111000012347
Q ss_pred CHHHHHHHHHhCCCcEEEEEecCCC
Q 016921 298 STADYVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 298 ~~~~~~~ll~~aGf~~v~~~~~~~~ 322 (380)
+.+++.++|+++||+++++......
T Consensus 318 ~~~~~~~ll~~aGf~~~~~~~~~~~ 342 (374)
T 1qzz_A 318 TRDEVVDLAGSAGLALASERTSGST 342 (374)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEECCS
T ss_pred CHHHHHHHHHHCCCceEEEEECCCC
Confidence 9999999999999999998876543
No 63
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.79 E-value=7.5e-20 Score=166.26 Aligned_cols=164 Identities=10% Similarity=0.004 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC--------
Q 016921 135 RAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL-------- 206 (380)
Q Consensus 135 ~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~-------- 206 (380)
..+..+.+..++.. +. .++.+|||||||+|.++..++.....+|+|+|+|+.|++.|+++++....
T Consensus 38 ~~~~~~~~~~~~~~-~~-----~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~ 111 (263)
T 2a14_A 38 LKFNLECLHKTFGP-GG-----LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAV 111 (263)
T ss_dssp HHHHHHHHHHHHST-TS-----CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHH
T ss_pred HHHHHHHHHHHhcC-CC-----CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHH
Confidence 44554455554422 22 24789999999999888776665224799999999999999987654310
Q ss_pred --------------------CCCeE-EEEcCCCCC-CC---CCCCccEEEeccccCCC----CCHHHHHHHHHHhcCCCc
Q 016921 207 --------------------ADKVS-FQVGDALQQ-PF---PDGQFDLVWSMESGEHM----PDKSKFVSELARVTAPAG 257 (380)
Q Consensus 207 --------------------~~~v~-~~~~d~~~~-~~---~~~~fD~V~~~~~l~~~----~~~~~~l~~~~r~LkpgG 257 (380)
..++. ++++|+.+. |+ ..++||+|++..+++|+ ++...++++++++|||||
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG 191 (263)
T 2a14_A 112 KFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGG 191 (263)
T ss_dssp HHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEE
T ss_pred HHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCc
Confidence 01243 889999874 43 25799999999999986 345789999999999999
Q ss_pred EEEEEeccCCCCCCCccccchHHHHHHHHHhh-ccCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 016921 258 TIIIVTWCHRDLAPSEESLQPWEQELLKKICD-AYYLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 258 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
.|++.+...... +. ... .+. ...++.+++.++|+++||++++...+.
T Consensus 192 ~li~~~~~~~~~------~~---------~g~~~~~-~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 192 HLVTTVTLRLPS------YM---------VGKREFS-CVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp EEEEEEESSCCE------EE---------ETTEEEE-CCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred EEEEEEeecCcc------ce---------eCCeEee-ccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 999987532211 00 000 011 123689999999999999999988765
No 64
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.79 E-value=8.4e-19 Score=158.97 Aligned_cols=152 Identities=21% Similarity=0.237 Sum_probs=109.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. . .++++|+.++++++++||+|++..++.|
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 126 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLPFPSGAFEAVLALGDVLS 126 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCCSCTTCEEEEEECSSHHH
T ss_pred CCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCCCCCCCEEEEEEcchhhh
Confidence 789999999999999999987 7899999999999999988652 1 2899999999888899999999887766
Q ss_pred C-CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCC---CccccchHHHHHHHHHhhc-cC-----CCCCCCHHHHHHHHHh
Q 016921 239 M-PDKSKFVSELARVTAPAGTIIIVTWCHRDLAP---SEESLQPWEQELLKKICDA-YY-----LPAWCSTADYVKLLQS 308 (380)
Q Consensus 239 ~-~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~ll~~ 308 (380)
+ +++..+++++.++|||||.+++..+....... ....+ ......+...... .. ...+++++++.++
T Consensus 127 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--- 202 (260)
T 2avn_A 127 YVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAW-DQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL--- 202 (260)
T ss_dssp HCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCH-HHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---
T ss_pred ccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhH-HHHHHHHhccccccCCCceeEEEeccCHHHHHHh---
Confidence 6 78999999999999999999998753210000 00000 0000011100000 00 0125688888877
Q ss_pred CCCcEEEEEecCCC
Q 016921 309 LSLEDIKAEDWSQN 322 (380)
Q Consensus 309 aGf~~v~~~~~~~~ 322 (380)
+||+++++......
T Consensus 203 aGf~~~~~~~~~~~ 216 (260)
T 2avn_A 203 EGFETVDIRGIGVM 216 (260)
T ss_dssp TTEEEEEEEEECSS
T ss_pred cCceEEEEECCCCc
Confidence 99999998876543
No 65
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.79 E-value=2.8e-18 Score=148.56 Aligned_cols=139 Identities=22% Similarity=0.336 Sum_probs=115.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++.++.+|+.++++ +++||+|++..+++|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 779999999999999999987 88999999999999999999887776 369999999999887 789999999999999
Q ss_pred CC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEE
Q 016921 239 MP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (380)
Q Consensus 239 ~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 316 (380)
++ +...+++++.++|||||.+++.+.......+.. ......++.+++.+++++ |++++.
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT-----------------VGFPFAFKEGELRRYYEG--WERVKY 170 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC-----------------SCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC-----------------CCCCCccCHHHHHHHhcC--CeEEEe
Confidence 97 789999999999999999888765432211100 111224678999999986 998887
Q ss_pred Eec
Q 016921 317 EDW 319 (380)
Q Consensus 317 ~~~ 319 (380)
.+.
T Consensus 171 ~~~ 173 (199)
T 2xvm_A 171 NED 173 (199)
T ss_dssp ECC
T ss_pred ccc
Confidence 644
No 66
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.79 E-value=1.1e-18 Score=157.18 Aligned_cols=142 Identities=13% Similarity=0.197 Sum_probs=111.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH----------c------CCCCCeEEEEcCCCCCC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAA----------R------GLADKVSFQVGDALQQP 221 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~----------~------~~~~~v~~~~~d~~~~~ 221 (380)
++.+|||+|||+|..+..|++. |.+|+|+|+|+.|++.|+++... . ....+++|+++|+.+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 3789999999999999999987 88999999999999999876531 0 01257999999999987
Q ss_pred CCC-CCccEEEeccccCCCC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016921 222 FPD-GQFDLVWSMESGEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (380)
Q Consensus 222 ~~~-~~fD~V~~~~~l~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (380)
+++ ++||+|++..+++|++ +...+++++.++|||||++++..+...... ..+.+...+
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~-------------------~~g~~~~~~ 207 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK-------------------HAGPPFYVP 207 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS-------------------CCCSSCCCC
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc-------------------CCCCCCCCC
Confidence 654 8999999999999995 457899999999999999976654422110 001111258
Q ss_pred HHHHHHHHHhCCCcEEEEEecC
Q 016921 299 TADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 299 ~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
++++.++++. +|+++..+.+.
T Consensus 208 ~~el~~~l~~-~f~v~~~~~~~ 228 (252)
T 2gb4_A 208 SAELKRLFGT-KCSMQCLEEVD 228 (252)
T ss_dssp HHHHHHHHTT-TEEEEEEEEEE
T ss_pred HHHHHHHhhC-CeEEEEEeccc
Confidence 9999999987 59988876543
No 67
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.78 E-value=8.4e-19 Score=161.47 Aligned_cols=149 Identities=13% Similarity=0.067 Sum_probs=109.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-----------------CCCC------------
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR-----------------GLAD------------ 208 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~-----------------~~~~------------ 208 (380)
++.+|||||||+|.....++...+.+|+|+|+|+.|++.|++++... +...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 47899999999999655444433779999999999999998865321 1000
Q ss_pred CeEEEEcCCCC-CCC-----CCCCccEEEeccccCC----CCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccch
Q 016921 209 KVSFQVGDALQ-QPF-----PDGQFDLVWSMESGEH----MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQP 278 (380)
Q Consensus 209 ~v~~~~~d~~~-~~~-----~~~~fD~V~~~~~l~~----~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~ 278 (380)
.+.++.+|+.+ +|+ ++++||+|++..+++| ++++..++++++++|||||+|++......... ..
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~------~~ 224 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWY------LA 224 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEE------EE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceE------Ec
Confidence 15677889987 553 3467999999999999 56789999999999999999999863321100 00
Q ss_pred HHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 016921 279 WEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (380)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 321 (380)
........+++.+++.++|+++||+++.+..+..
T Consensus 225 ---------~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 258 (289)
T 2g72_A 225 ---------GEARLTVVPVSEEEVREALVRSGYKVRDLRTYIM 258 (289)
T ss_dssp ---------TTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred ---------CCeeeeeccCCHHHHHHHHHHcCCeEEEeeEeec
Confidence 0000112347899999999999999998876653
No 68
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.78 E-value=1.6e-18 Score=153.37 Aligned_cols=104 Identities=31% Similarity=0.457 Sum_probs=93.6
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccc--c
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES--G 236 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~--l 236 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+ .+++++++|+.++++++++||+|++..+ +
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 789999999999999999887 6699999999999999999987766 5799999999998877889999999998 5
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
++..+...+++++.++|||||.+++.+..
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 55567889999999999999999998754
No 69
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.77 E-value=6.3e-18 Score=159.83 Aligned_cols=160 Identities=15% Similarity=0.102 Sum_probs=117.8
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 142 ~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
...++..+++.. +.+|||||||+|.++..+++.+ +.+++++|+ +.++. +++....++.++++++.+|+. .
T Consensus 173 ~~~~~~~~~~~~-----~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~-~ 243 (348)
T 3lst_A 173 HLILARAGDFPA-----TGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL-R 243 (348)
T ss_dssp HHHHHHHSCCCS-----SEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT-T
T ss_pred HHHHHHhCCccC-----CceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC-C
Confidence 445666665544 8899999999999999999987 678999999 44444 333333345578999999997 3
Q ss_pred CCCCCCccEEEeccccCCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016921 221 PFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (380)
+++ +||+|++..++||+++. .+++++++++|||||+|++.+...+.... .... ..+............++
T Consensus 244 ~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~--~~~~----~~~d~~~~~~~~~~~~t 315 (348)
T 3lst_A 244 EVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGND--AHQS----KEMDFMMLAARTGQERT 315 (348)
T ss_dssp CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSS--CCHH----HHHHHHHHHTTSCCCCB
T ss_pred CCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchh----hhcChhhhhcCCCcCCC
Confidence 445 89999999999999887 69999999999999999999976544311 1111 11111111111223478
Q ss_pred HHHHHHHHHhCCCcEEEEEe
Q 016921 299 TADYVKLLQSLSLEDIKAED 318 (380)
Q Consensus 299 ~~~~~~ll~~aGf~~v~~~~ 318 (380)
.++|.++|+++||+++++..
T Consensus 316 ~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 316 AAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEE
Confidence 99999999999999999876
No 70
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.77 E-value=7.7e-18 Score=159.44 Aligned_cols=153 Identities=17% Similarity=0.181 Sum_probs=119.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCCccEEEecccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSMESG 236 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~~~l 236 (380)
+.+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++++...++.++++++.+|+.+.+ +..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 7899999999999999999987 689999999 8899999999988888778999999998865 134679999999999
Q ss_pred CCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEE
Q 016921 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (380)
Q Consensus 237 ~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v 314 (380)
||+++. ..++++++++|||||++++.+...+..... .......+..... .......++.++|.++|+++||+++
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~t~~e~~~ll~~aGf~~~ 334 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVT--PALSADFSLHMMV--NTNHGELHPTPWIAGVVRDAGLAVG 334 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSS--SHHHHHHHHHHHH--HSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCC--CchHHHhhHHHHh--hCCCCCcCCHHHHHHHHHHCCCcee
Confidence 999865 799999999999999999999765442211 1111111111111 1111224789999999999999998
Q ss_pred EE
Q 016921 315 KA 316 (380)
Q Consensus 315 ~~ 316 (380)
+.
T Consensus 335 ~~ 336 (352)
T 3mcz_A 335 ER 336 (352)
T ss_dssp EE
T ss_pred ee
Confidence 73
No 71
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.77 E-value=5.6e-19 Score=162.95 Aligned_cols=152 Identities=14% Similarity=0.249 Sum_probs=111.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC-------------------------------
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG------------------------------- 205 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~------------------------------- 205 (380)
++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|++++...+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 47899999999999999999987 6899999999999999998865433
Q ss_pred --------------------------CCCCeEEEEcCCCCCC-----CCCCCccEEEeccccCCCC------CHHHHHHH
Q 016921 206 --------------------------LADKVSFQVGDALQQP-----FPDGQFDLVWSMESGEHMP------DKSKFVSE 248 (380)
Q Consensus 206 --------------------------~~~~v~~~~~d~~~~~-----~~~~~fD~V~~~~~l~~~~------~~~~~l~~ 248 (380)
.+.++.|+++|+...+ +.+++||+|+|..+++|+. +...++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 2258999999998654 5678999999999998875 67889999
Q ss_pred HHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHh--CCCcEEEEEe
Q 016921 249 LARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQS--LSLEDIKAED 318 (380)
Q Consensus 249 ~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--aGf~~v~~~~ 318 (380)
++++|||||+|++....+..... ...+... +........ +.++++.++|.+ +||+.+++..
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~-~~~~~~~----~~~~~~~~~----~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGK-RKTLTET----IYKNYYRIQ----LKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHT-TTTSCHH----HHHHHHHCC----CCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHhCCCcEEEEecCCchhhhh-hhcccHH----HHhhhhcEE----EcHHHHHHHHHhcCCCceEEEEec
Confidence 99999999999996532111100 0111111 111111111 347899999999 9998887643
No 72
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.77 E-value=1.1e-17 Score=157.32 Aligned_cols=163 Identities=16% Similarity=0.161 Sum_probs=124.3
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 142 ~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
...++...+.. + .+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++++...++.++++++.+|+.+
T Consensus 157 ~~~~~~~~~~~-----~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 228 (334)
T 2ip2_A 157 FHEIPRLLDFR-----G-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ- 228 (334)
T ss_dssp HHHHHHHSCCT-----T-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-
T ss_pred HHHHHHhCCCC-----C-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-
Confidence 44555555432 3 899999999999999999987 679999999 99999999988776666789999999987
Q ss_pred CCCCCCccEEEeccccCCCCCHH--HHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016921 221 PFPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (380)
+++ ++||+|++..+++|+++.. .++++++++|||||++++.+...+.... ..... ..+...... .. ...++
T Consensus 229 ~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~-~~~~~~~~~-~~--~~~~t 301 (334)
T 2ip2_A 229 EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP--SPMSV-LWDVHLFMA-CA--GRHRT 301 (334)
T ss_dssp CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC--CHHHH-HHHHHHHHH-HS--CCCCB
T ss_pred CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchhH-HhhhHhHhh-CC--CcCCC
Confidence 555 6899999999999998765 9999999999999999999876443211 11111 111111111 11 12368
Q ss_pred HHHHHHHHHhCCCcEEEEEec
Q 016921 299 TADYVKLLQSLSLEDIKAEDW 319 (380)
Q Consensus 299 ~~~~~~ll~~aGf~~v~~~~~ 319 (380)
.++|.++|+++||+++++...
T Consensus 302 ~~e~~~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 302 TEEVVDLLGRGGFAVERIVDL 322 (334)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHCCCceeEEEEC
Confidence 999999999999999988754
No 73
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.76 E-value=3e-18 Score=149.11 Aligned_cols=142 Identities=17% Similarity=0.210 Sum_probs=113.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+ +|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+. ++.++++|+.++++++++||+|++.. .|
T Consensus 31 ~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~--~~ 104 (202)
T 2kw5_A 31 G-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSIF--CH 104 (202)
T ss_dssp S-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEEC--CC
T ss_pred C-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEEh--hc
Confidence 6 9999999999999999986 88999999999999999999887764 79999999999888889999999854 34
Q ss_pred C--CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEE
Q 016921 239 M--PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (380)
Q Consensus 239 ~--~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 316 (380)
+ .+...+++++.++|||||.+++.++....... . .........+++.+++.++|+ ||+++..
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY-----N---------TGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG-----T---------SCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC-----C---------CCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 4 46789999999999999999999865432110 0 000001112578999999999 9999988
Q ss_pred EecCCC
Q 016921 317 EDWSQN 322 (380)
Q Consensus 317 ~~~~~~ 322 (380)
+.....
T Consensus 169 ~~~~~~ 174 (202)
T 2kw5_A 169 NNLERN 174 (202)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 766544
No 74
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.76 E-value=9e-18 Score=149.76 Aligned_cols=100 Identities=21% Similarity=0.349 Sum_probs=87.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEe-ccccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWS-MESGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~-~~~l~ 237 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. +++.++++|+.++++ +++||+|+| ..+++
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~ 112 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL-GRKFSAVVSMFSSVG 112 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC-SSCEEEEEECTTGGG
T ss_pred CCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc-CCCCcEEEEcCchHh
Confidence 789999999999999999987 459999999999999998864 469999999999876 689999995 45999
Q ss_pred CCC---CHHHHHHHHHHhcCCCcEEEEEeccC
Q 016921 238 HMP---DKSKFVSELARVTAPAGTIIIVTWCH 266 (380)
Q Consensus 238 ~~~---~~~~~l~~~~r~LkpgG~l~~~~~~~ 266 (380)
|+. +...+++++.++|||||.+++.++..
T Consensus 113 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 113 YLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp GCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 995 45789999999999999999987654
No 75
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.76 E-value=7.2e-18 Score=150.79 Aligned_cols=100 Identities=24% Similarity=0.350 Sum_probs=89.3
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecc-ccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME-SGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l~ 237 (380)
+.+|||||||+|.++..+++. .+|+|+|+|+.+++.|+++....+ .++.++++|+.+++++ ++||+|++.. +++
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELP-EPVDAITILCDSLN 108 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCS-SCEEEEEECTTGGG
T ss_pred CCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCC-CCcCEEEEeCCchh
Confidence 689999999999999999886 799999999999999999987765 4799999999988765 8899999986 999
Q ss_pred CCC---CHHHHHHHHHHhcCCCcEEEEEe
Q 016921 238 HMP---DKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 238 ~~~---~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
|+. +...+++++.++|||||.+++..
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 983 45789999999999999999854
No 76
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.76 E-value=1.4e-17 Score=158.20 Aligned_cols=164 Identities=18% Similarity=0.201 Sum_probs=124.8
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (380)
..++..+.+. ++.+|||||||+|.++..+++.. +.+++++|+ +.+++.|++++...++.++++++.+|+.+ +
T Consensus 173 ~~l~~~~~~~-----~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 245 (360)
T 1tw3_A 173 DAPAAAYDWT-----NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-P 245 (360)
T ss_dssp HHHHHHSCCT-----TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-C
T ss_pred HHHHHhCCCc-----cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-C
Confidence 3445555544 37899999999999999999987 679999999 99999999999888887799999999876 3
Q ss_pred CCCCCccEEEeccccCCCCCH--HHHHHHHHHhcCCCcEEEEEecc-CCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016921 222 FPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWC-HRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (380)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (380)
++. .||+|++..+++|+++. ..+++++.++|||||++++.++. .+... ...+.... +....... + ...++
T Consensus 246 ~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~-~~~~~~~~--~-~~~~t 318 (360)
T 1tw3_A 246 LPR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENS--FNEQFTEL-DLRMLVFL--G-GALRT 318 (360)
T ss_dssp CSS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGC--CSHHHHHH-HHHHHHHH--S-CCCCB
T ss_pred CCC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCC--Ccchhhhc-cHHHhhhc--C-CcCCC
Confidence 443 49999999999999876 48999999999999999999875 32211 00111111 11100111 1 23478
Q ss_pred HHHHHHHHHhCCCcEEEEEecC
Q 016921 299 TADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 299 ~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
.+++.++|+++||+++++....
T Consensus 319 ~~e~~~ll~~aGf~~~~~~~~~ 340 (360)
T 1tw3_A 319 REKWDGLAASAGLVVEEVRQLP 340 (360)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEeCC
Confidence 9999999999999999887654
No 77
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.76 E-value=8.9e-18 Score=154.75 Aligned_cols=105 Identities=25% Similarity=0.304 Sum_probs=93.6
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCeEEEEcCCCCCC---CCCCCccEEEe
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA---DKVSFQVGDALQQP---FPDGQFDLVWS 232 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~---~~v~~~~~d~~~~~---~~~~~fD~V~~ 232 (380)
+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++....+.. .++.+..+|+..++ +++++||+|++
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVIC 136 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEE
Confidence 789999999999999999987 789999999999999999887443321 36889999998877 77899999999
Q ss_pred c-cccCCCCC-------HHHHHHHHHHhcCCCcEEEEEec
Q 016921 233 M-ESGEHMPD-------KSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 233 ~-~~l~~~~~-------~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
. .+++|+++ +..++++++++|||||++++...
T Consensus 137 ~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 137 LGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 8 89999999 89999999999999999999864
No 78
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=5.7e-19 Score=154.40 Aligned_cols=156 Identities=21% Similarity=0.242 Sum_probs=116.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||+|||+|.++..++...+.+|+|+|+|+.+++.+++++...+ .++.++++|+.++++++++||+|++..+++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 378999999999998544444458899999999999999999987765 478999999999988889999999999999
Q ss_pred CC--CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCcc-ccchHHHHHHHHHhhcc-CCCCCCCHHHHHHHHHhCCCcE
Q 016921 238 HM--PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE-SLQPWEQELLKKICDAY-YLPAWCSTADYVKLLQSLSLED 313 (380)
Q Consensus 238 ~~--~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~aGf~~ 313 (380)
|+ .+...+++++.++|||||.+++.++.......... .+... .+....... ....+++.+++.++++++||..
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~ 177 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEG---EFLQLERGEKVIHSYVSLEEADKYFKDMKVLF 177 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETT---EEEECC-CCCEEEEEECHHHHHHTTTTSEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccc---cceeccCCCceeEEecCHHHHHHHHhhcCcee
Confidence 99 57789999999999999999999876543221100 00000 000000000 0113578999999999999987
Q ss_pred EEEEe
Q 016921 314 IKAED 318 (380)
Q Consensus 314 v~~~~ 318 (380)
.+...
T Consensus 178 ~~~~~ 182 (209)
T 2p8j_A 178 KEDRV 182 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 76543
No 79
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=9.4e-18 Score=150.50 Aligned_cols=154 Identities=13% Similarity=0.162 Sum_probs=115.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC-----CCccEEEe
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPD-----GQFDLVWS 232 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~fD~V~~ 232 (380)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..++.++++|+.+++... ..||+|++
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEEEE
Confidence 4789999999999999999997 5699999999999999998762 247999999998864321 34999999
Q ss_pred ccccCCCC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHH------HHHHHHhhccCCCCCCCHHHHHH
Q 016921 233 MESGEHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQ------ELLKKICDAYYLPAWCSTADYVK 304 (380)
Q Consensus 233 ~~~l~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 304 (380)
..+++|++ +...+++++.++|||||++++.++..... ..+..... ..+.........+..++.+++.+
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCI----DFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIEL 206 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHH----HHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHH
T ss_pred cchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcccc----HHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHH
Confidence 99999998 78999999999999999999998753221 00000000 00111222222334578999999
Q ss_pred HHHhCCCcEEEEEecCCC
Q 016921 305 LLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 305 ll~~aGf~~v~~~~~~~~ 322 (380)
++ +||+++........
T Consensus 207 ~~--aGf~~~~~~~~~~~ 222 (245)
T 3ggd_A 207 YF--PDFEILSQGEGLFQ 222 (245)
T ss_dssp HC--TTEEEEEEECCBCC
T ss_pred Hh--CCCEEEeccccccc
Confidence 99 99999988766544
No 80
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.75 E-value=4.8e-19 Score=158.30 Aligned_cols=104 Identities=20% Similarity=0.166 Sum_probs=89.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCCccEEEe---
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWS--- 232 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~--- 232 (380)
++.+|||||||+|..+..+++..+.+|+|||+|+.+++.|+++....+ .++.++.+|+... ++++++||.|+.
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceEEEeee
Confidence 489999999999999999988656789999999999999999887665 4688999998764 467889999974
Q ss_pred --ccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 233 --MESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 233 --~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
...++|+.++..++++++|+|||||+|++.+
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 5667788899999999999999999998754
No 81
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.74 E-value=1.4e-16 Score=138.74 Aligned_cols=136 Identities=13% Similarity=0.044 Sum_probs=111.3
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP 221 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 221 (380)
..++..+.+.+ +.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|++++...++ ++++++.+|+.+..
T Consensus 30 ~~~l~~l~~~~-----~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~ 103 (204)
T 3e05_A 30 AVTLSKLRLQD-----DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGL 103 (204)
T ss_dssp HHHHHHTTCCT-----TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTC
T ss_pred HHHHHHcCCCC-----CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhh
Confidence 44555555544 8999999999999999999985 48999999999999999999988887 68999999997654
Q ss_pred CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHH
Q 016921 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (380)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (380)
...++||+|++..+++ +...+++++.++|||||++++..... .+.++
T Consensus 104 ~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------------~~~~~ 150 (204)
T 3e05_A 104 DDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL------------------------------DTLTK 150 (204)
T ss_dssp TTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH------------------------------HHHHH
T ss_pred hcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc------------------------------ccHHH
Confidence 3347899999987765 78899999999999999999976321 12467
Q ss_pred HHHHHHhCCCcEEEEEe
Q 016921 302 YVKLLQSLSLEDIKAED 318 (380)
Q Consensus 302 ~~~ll~~aGf~~v~~~~ 318 (380)
+.++++++|| .++...
T Consensus 151 ~~~~l~~~g~-~~~~~~ 166 (204)
T 3e05_A 151 AVEFLEDHGY-MVEVAC 166 (204)
T ss_dssp HHHHHHHTTC-EEEEEE
T ss_pred HHHHHHHCCC-ceeEEE
Confidence 8889999999 555443
No 82
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.74 E-value=6.4e-18 Score=156.30 Aligned_cols=164 Identities=13% Similarity=0.092 Sum_probs=111.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-----CeEEEEcCCC------CC--CCCC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-----KVSFQVGDAL------QQ--PFPD 224 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~-----~v~~~~~d~~------~~--~~~~ 224 (380)
++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++....+... ++.|.+.|+. ++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 478999999999987766665445799999999999999999987655321 2678888873 22 3467
Q ss_pred CCccEEEeccccCCC---CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCC----------c----cccchHH---HHHH
Q 016921 225 GQFDLVWSMESGEHM---PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPS----------E----ESLQPWE---QELL 284 (380)
Q Consensus 225 ~~fD~V~~~~~l~~~---~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~----------~----~~~~~~~---~~~~ 284 (380)
++||+|+|..+++|+ .+...++++++++|||||++++........... . ..+.... .+.+
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 207 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRI 207 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccccc
Confidence 899999999999875 456899999999999999999987532111000 0 0000000 0000
Q ss_pred HHHhh---ccCCC-CCCCHHHHHHHHHhCCCcEEEEEecCC
Q 016921 285 KKICD---AYYLP-AWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (380)
Q Consensus 285 ~~~~~---~~~~~-~~~~~~~~~~ll~~aGf~~v~~~~~~~ 321 (380)
..... ....+ .+.+++++.++++++||+++....+..
T Consensus 208 ~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~~ 248 (302)
T 2vdw_A 208 VVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFAT 248 (302)
T ss_dssp EEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHHH
T ss_pred ceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChHH
Confidence 00000 00111 246789999999999999999876654
No 83
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.74 E-value=8e-17 Score=153.30 Aligned_cols=151 Identities=17% Similarity=0.181 Sum_probs=112.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++|+.+|+.+ +++.+ |+|++..++
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~p~~--D~v~~~~vl 271 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA-------FSGVEHLGGDMFD-GVPKG--DAIFIKWIC 271 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTT-CCCCC--SEEEEESCG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh-------cCCCEEEecCCCC-CCCCC--CEEEEechh
Confidence 47899999999999999999987 789999999 888877653 1579999999987 66654 999999999
Q ss_pred CCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhc-cCCCCCCCHHHHHHHHHhCCCcE
Q 016921 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA-YYLPAWCSTADYVKLLQSLSLED 313 (380)
Q Consensus 237 ~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~aGf~~ 313 (380)
||+++. .+++++++++|||||+|++.++..+...... ........+...... ......++.++|.++|+++||++
T Consensus 272 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~ 349 (368)
T 3reo_A 272 HDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPS--IATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRG 349 (368)
T ss_dssp GGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCC--HHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc--hhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCee
Confidence 999775 4789999999999999999997654322111 011111111111111 11122468999999999999999
Q ss_pred EEEEecCC
Q 016921 314 IKAEDWSQ 321 (380)
Q Consensus 314 v~~~~~~~ 321 (380)
+++.....
T Consensus 350 v~~~~~~~ 357 (368)
T 3reo_A 350 FKVASCAF 357 (368)
T ss_dssp EEEEEEET
T ss_pred eEEEEeCC
Confidence 99876543
No 84
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.74 E-value=1.2e-16 Score=151.92 Aligned_cols=163 Identities=15% Similarity=0.138 Sum_probs=119.0
Q ss_pred HHHHHHHHcC-CCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 141 MIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~-~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
....++..+. .. +..+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++ .++++|+.+|+.
T Consensus 188 ~~~~~~~~~~~~~-----~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~ 254 (364)
T 3p9c_A 188 ITKKLLELYHGFE-----GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ-------FPGVTHVGGDMF 254 (364)
T ss_dssp HHHHHHHHCCTTT-----TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTT
T ss_pred HHHHHHHhccccc-----CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh-------cCCeEEEeCCcC
Confidence 3455666554 33 37899999999999999999987 789999999 888876653 158999999998
Q ss_pred CCCCCCCCccEEEeccccCCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhh-ccCCCC
Q 016921 219 QQPFPDGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICD-AYYLPA 295 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 295 (380)
+ +++.+ |+|++..++|++++. .+++++++++|||||+|++.+...+...... ........+..... ......
T Consensus 255 ~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~~~~~~d~~m~~~~~~g~ 329 (364)
T 3p9c_A 255 K-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEAN--PSSQGVFHVDMIMLAHNPGGR 329 (364)
T ss_dssp T-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSS--HHHHHHHHHHHHHHHHCSSCC
T ss_pred C-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcc--hhhhhHHHhHHHHHhcccCCc
Confidence 8 77654 999999999999764 5899999999999999999997654422111 01101011111111 111123
Q ss_pred CCCHHHHHHHHHhCCCcEEEEEecCC
Q 016921 296 WCSTADYVKLLQSLSLEDIKAEDWSQ 321 (380)
Q Consensus 296 ~~~~~~~~~ll~~aGf~~v~~~~~~~ 321 (380)
.++.++|.++|+++||+++++.....
T Consensus 330 ~rt~~e~~~ll~~AGF~~v~~~~~~~ 355 (364)
T 3p9c_A 330 ERYEREFQALARGAGFTGVKSTYIYA 355 (364)
T ss_dssp CCBHHHHHHHHHHTTCCEEEEEEEET
T ss_pred cCCHHHHHHHHHHCCCceEEEEEcCC
Confidence 46899999999999999999876543
No 85
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.74 E-value=7.6e-17 Score=147.10 Aligned_cols=160 Identities=10% Similarity=0.104 Sum_probs=115.6
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCc---ChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE
Q 016921 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGI---GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQV 214 (380)
Q Consensus 139 ~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGt---G~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~ 214 (380)
+.++..++..+.... ...+|||||||+ |.++..+++.. +.+|+++|+|+.|++.|++++.. .+++.+++
T Consensus 62 ~~~~~~~~~~l~~~~----~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~ 134 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEA----GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFT 134 (274)
T ss_dssp HHHHHHHHHHHHTTT----CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEE
T ss_pred hHHHHHHHHHHhhcc----CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEE
Confidence 445555555443111 257999999999 98887776655 68999999999999999998843 25799999
Q ss_pred cCCCCCC-----------CCCCCccEEEeccccCCCCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHH
Q 016921 215 GDALQQP-----------FPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQ 281 (380)
Q Consensus 215 ~d~~~~~-----------~~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 281 (380)
+|+.+.+ ++.++||+|++..++||+++ +..++++++++|||||+|++.++.... + ..... ..
T Consensus 135 ~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~--~~~~~-~~ 209 (274)
T 2qe6_A 135 ADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG--L--PAQQK-LA 209 (274)
T ss_dssp CCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS--C--HHHHH-HH
T ss_pred eeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc--h--HHHHH-HH
Confidence 9997631 33358999999999999987 899999999999999999999976422 1 11111 11
Q ss_pred HHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEE
Q 016921 282 ELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (380)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 315 (380)
..+..... . ..+++.+++.++| .||++++
T Consensus 210 ~~~~~~~~--~-~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 210 RITRENLG--E-GWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp HHHHHHHS--C-CCCBCHHHHHHTT--TTCEECT
T ss_pred HHHHhcCC--C-CccCCHHHHHHHh--CCCeEcc
Confidence 11221111 1 1357999999999 5998764
No 86
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.74 E-value=9.7e-18 Score=151.95 Aligned_cols=149 Identities=11% Similarity=0.027 Sum_probs=114.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCC----------------------------CC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGL----------------------------AD 208 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~----------------------------~~ 208 (380)
++.+|||||||+|.++..++.. +. +|+|+|+|+.+++.+++++...+. ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 4789999999999999998876 55 999999999999999988754320 01
Q ss_pred Ce-EEEEcCCCCCC-CCC---CCccEEEeccccC----CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchH
Q 016921 209 KV-SFQVGDALQQP-FPD---GQFDLVWSMESGE----HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPW 279 (380)
Q Consensus 209 ~v-~~~~~d~~~~~-~~~---~~fD~V~~~~~l~----~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 279 (380)
++ .++++|+.+.+ +++ ++||+|++..+++ ++.++..+++++.++|||||+|++.+...... +..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~------~~~- 207 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSY------YMI- 207 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE------EEE-
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCce------EEc-
Confidence 27 89999998864 345 8999999999999 55678899999999999999999988432210 000
Q ss_pred HHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEecCCC
Q 016921 280 EQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~~~ 322 (380)
.........++.+++.++|+++||+++++......
T Consensus 208 --------~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~ 242 (265)
T 2i62_A 208 --------GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQN 242 (265)
T ss_dssp --------TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCC
T ss_pred --------CCccccccccCHHHHHHHHHHCCCEEEEEEEeccc
Confidence 01000112468899999999999999998876543
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.74 E-value=1.1e-16 Score=139.70 Aligned_cols=133 Identities=16% Similarity=0.086 Sum_probs=109.0
Q ss_pred HHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC
Q 016921 144 ETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP 223 (380)
Q Consensus 144 ~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 223 (380)
.++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+++.+++.|+++++..+++.+++++++|+.+....
T Consensus 46 ~~l~~l~~~~-----~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 119 (204)
T 3njr_A 46 LTLAALAPRR-----GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD 119 (204)
T ss_dssp HHHHHHCCCT-----TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT
T ss_pred HHHHhcCCCC-----CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc
Confidence 3455555544 889999999999999999998 8999999999999999999999888876899999999884323
Q ss_pred CCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHH
Q 016921 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYV 303 (380)
Q Consensus 224 ~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (380)
..+||+|++..++ +.. +++++.++|||||++++..... .+..++.
T Consensus 120 ~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~------------------------------~~~~~~~ 164 (204)
T 3njr_A 120 LPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL------------------------------ESETLLT 164 (204)
T ss_dssp SCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH------------------------------HHHHHHH
T ss_pred CCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc------------------------------ccHHHHH
Confidence 4679999987644 566 9999999999999999976321 1245777
Q ss_pred HHHHhCCCcEEEEE
Q 016921 304 KLLQSLSLEDIKAE 317 (380)
Q Consensus 304 ~ll~~aGf~~v~~~ 317 (380)
+++++.|++++.+.
T Consensus 165 ~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 165 QLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHCSEEEEEE
T ss_pred HHHHhCCCcEEEEE
Confidence 88999999887764
No 88
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.73 E-value=1.8e-17 Score=149.07 Aligned_cols=146 Identities=15% Similarity=0.201 Sum_probs=106.1
Q ss_pred CCEEEEECCCc--ChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CC--CCCcc
Q 016921 159 PKNVVDVGCGI--GGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FP--DGQFD 228 (380)
Q Consensus 159 ~~~vLDiGcGt--G~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~--~~~fD 228 (380)
..+|||||||+ +.++..++++. +++|+++|+|+.|++.|++++...+ ..++.|+++|+.+++ .+ .+.||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhcccccccccC
Confidence 46899999997 55666666654 7899999999999999999885432 247999999998852 01 24565
Q ss_pred -----EEEeccccCCCCC---HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCC-CCCCH
Q 016921 229 -----LVWSMESGEHMPD---KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLP-AWCST 299 (380)
Q Consensus 229 -----~V~~~~~l~~~~~---~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 299 (380)
.|+++.+|||+++ +..+++++.+.|+|||+|++.++..+.. +.....+...+.....+ .+++.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~--------p~~~~~~~~~~~~~g~p~~~rs~ 229 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFA--------PQEVGRVAREYAARNMPMRLRTH 229 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTS--------HHHHHHHHHHHHHTTCCCCCCCH
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCC--------HHHHHHHHHHHHhcCCCCccCCH
Confidence 5888999999987 5789999999999999999998754311 11111222222222222 35799
Q ss_pred HHHHHHHHhCCCcEEE
Q 016921 300 ADYVKLLQSLSLEDIK 315 (380)
Q Consensus 300 ~~~~~ll~~aGf~~v~ 315 (380)
+++..+|. ||+.++
T Consensus 230 ~ei~~~f~--Glelve 243 (277)
T 3giw_A 230 AEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHHTTT--TSEECT
T ss_pred HHHHHHhC--CCcccC
Confidence 99999995 999664
No 89
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.73 E-value=4.2e-17 Score=140.41 Aligned_cols=126 Identities=23% Similarity=0.368 Sum_probs=108.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEec-ccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM-ESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~-~~l 236 (380)
++.+|||||||+|.++..+++. +.+++|+|+++.+++.++++. .++.++++|+.++++++++||+|++. .++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~ 118 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGNVM 118 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCCCG
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCcHH
Confidence 3789999999999999999987 889999999999999998865 36899999999988878899999998 688
Q ss_pred CCCC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEE
Q 016921 237 EHMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (380)
Q Consensus 237 ~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v 314 (380)
+|+. +...+++++.++|+|||.+++...... .++.+++.++++++||+++
T Consensus 119 ~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~----------------------------~~~~~~~~~~l~~~Gf~~~ 170 (195)
T 3cgg_A 119 GFLAEDGREPALANIHRALGADGRAVIGFGAGR----------------------------GWVFGDFLEVAERVGLELE 170 (195)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS----------------------------SCCHHHHHHHHHHHTEEEE
T ss_pred hhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC----------------------------CcCHHHHHHHHHHcCCEEe
Confidence 8884 458899999999999999999763210 1468899999999999988
Q ss_pred EEEe
Q 016921 315 KAED 318 (380)
Q Consensus 315 ~~~~ 318 (380)
+...
T Consensus 171 ~~~~ 174 (195)
T 3cgg_A 171 NAFE 174 (195)
T ss_dssp EEES
T ss_pred eeec
Confidence 7653
No 90
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.73 E-value=2e-17 Score=145.38 Aligned_cols=102 Identities=22% Similarity=0.305 Sum_probs=92.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.... +++.++++|+.+++ ++++||+|++..+++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFS-TAELFDLIVVAEVLY 125 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCC-CSCCEEEEEEESCGG
T ss_pred CCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCC-CCCCccEEEEccHHH
Confidence 4789999999999999999987 679999999999999999887543 37999999999987 678999999999999
Q ss_pred CCCCH---HHHHHHHHHhcCCCcEEEEEec
Q 016921 238 HMPDK---SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 238 ~~~~~---~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|++++ ..+++++.++|||||.+++.+.
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 99987 5679999999999999999874
No 91
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.73 E-value=2.3e-16 Score=149.31 Aligned_cols=154 Identities=18% Similarity=0.240 Sum_probs=116.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
+..+|||||||+|.++..+++++ +.++++.|+ |.+++.|++.....+ .++|+|+.+|+.+.+.+ .+|+|++..+|
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCCC--CceEEEeeeec
Confidence 37899999999999999999998 788999998 889999988775444 57999999999876544 57999999999
Q ss_pred CCCCCH--HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEE
Q 016921 237 EHMPDK--SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (380)
Q Consensus 237 ~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v 314 (380)
|+++|. .++|+++++.|+|||+++|.+...+..... .......+. .-.....+ .-+|.++|.++|+++||+++
T Consensus 255 h~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~--~~~~~~~dl-~ml~~~~g--~ert~~e~~~ll~~AGf~~v 329 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRG--PLLTQLYSL-NMLVQTEG--QERTPTHYHMLLSSAGFRDF 329 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCC--CHHHHHHHH-HHHHSSSC--CCCCHHHHHHHHHHHTCEEE
T ss_pred ccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCC--CHHHHHHHH-HHHHhCCC--cCCCHHHHHHHHHHCCCceE
Confidence 999876 578999999999999999999765432211 111111111 11111112 23689999999999999999
Q ss_pred EEEecC
Q 016921 315 KAEDWS 320 (380)
Q Consensus 315 ~~~~~~ 320 (380)
++....
T Consensus 330 ~v~~~~ 335 (353)
T 4a6d_A 330 QFKKTG 335 (353)
T ss_dssp EEECCS
T ss_pred EEEEcC
Confidence 987654
No 92
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.72 E-value=1.6e-17 Score=145.89 Aligned_cols=113 Identities=19% Similarity=0.255 Sum_probs=97.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+ +.+|+|+|+|+. ++.+.++|+.++++++++||+|++..+++
T Consensus 67 ~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 126 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI----RNPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLSLM 126 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC----CSCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESCCC
T ss_pred CCCeEEEECCcCCHHHHHh----hccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehhcc
Confidence 3789999999999998876 468999999986 46789999999888889999999999996
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 317 (380)
+ .++..+++++.++|+|||.+++.++... +.+.+++.++|+++||+++...
T Consensus 127 ~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~----------------------------~~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 127 G-TNIRDFLEEANRVLKPGGLLKVAEVSSR----------------------------FEDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp S-SCHHHHHHHHHHHEEEEEEEEEEECGGG----------------------------CSCHHHHHHHHHHTTEEEEEEE
T ss_pred c-cCHHHHHHHHHHhCCCCeEEEEEEcCCC----------------------------CCCHHHHHHHHHHCCCEEEEEe
Confidence 5 8999999999999999999999874310 1368999999999999998865
Q ss_pred ec
Q 016921 318 DW 319 (380)
Q Consensus 318 ~~ 319 (380)
..
T Consensus 178 ~~ 179 (215)
T 2zfu_A 178 LT 179 (215)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 93
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=5e-18 Score=151.60 Aligned_cols=105 Identities=19% Similarity=0.135 Sum_probs=87.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCCccEEEe-cc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWS-ME 234 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~-~~ 234 (380)
++.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++....+ .++.++++|+.++ ++++++||+|++ .+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 378999999999999999977534589999999999999999886655 5799999999987 788899999999 55
Q ss_pred cc----CCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 235 SG----EHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 235 ~l----~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.+ .|..+...++++++++|||||+|++.++
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 43 1222345789999999999999998764
No 94
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.72 E-value=8.4e-17 Score=136.75 Aligned_cols=137 Identities=10% Similarity=0.007 Sum_probs=108.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
+...++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+++++...+++.++ ++.+|+.+
T Consensus 13 ~~~~~~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 13 VRALAISALAPKP-----HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp HHHHHHHHHCCCT-----TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred HHHHHHHHhcccC-----CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 3344555555543 8899999999999999999986 689999999999999999999888887688 88888754
Q ss_pred -CCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCC
Q 016921 220 -QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCS 298 (380)
Q Consensus 220 -~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (380)
++..+++||+|++..+++| ..+++++.++|||||++++.+... .+
T Consensus 87 ~~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~~ 132 (178)
T 3hm2_A 87 AFDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV------------------------------ES 132 (178)
T ss_dssp GGGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH------------------------------HH
T ss_pred hhhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc------------------------------cc
Confidence 3322389999999999887 678999999999999999987421 12
Q ss_pred HHHHHHHHHhCCCcEEEEE
Q 016921 299 TADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 299 ~~~~~~ll~~aGf~~v~~~ 317 (380)
...+..++++.|++...+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 133 EQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp HHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHHcCCeeEEEE
Confidence 3566778888888876653
No 95
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.72 E-value=7.6e-17 Score=153.75 Aligned_cols=161 Identities=19% Similarity=0.205 Sum_probs=117.9
Q ss_pred HHHHHHHHcC-CCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 141 MIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~-~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
.+..++..+. +. ++.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++ . ++++++.+|+.
T Consensus 196 ~~~~l~~~~~~~~-----~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~ 262 (372)
T 1fp1_D 196 EMKRMLEIYTGFE-----GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L-SGIEHVGGDMF 262 (372)
T ss_dssp HHHHHHHHCCTTT-----TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTT
T ss_pred HHHHHHHHhhccC-----CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCcc
Confidence 3455666653 33 37899999999999999999987 678999999 999887654 2 46999999998
Q ss_pred CCCCCCCCccEEEeccccCCCCCHH--HHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCC
Q 016921 219 QQPFPDGQFDLVWSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW 296 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (380)
+ +++. ||+|++..++||+++.. .++++++++|||||++++.++..+.... ..........+............
T Consensus 263 ~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~ 337 (372)
T 1fp1_D 263 A-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPN--TSEESKLVSTLDNLMFITVGGRE 337 (372)
T ss_dssp T-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCC--SSHHHHHHHHHHHHHHHHHSCCC
T ss_pred c-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCc--cchHHHHHHHhhHHHHhccCCcc
Confidence 7 6654 99999999999999887 9999999999999999999876543221 11100001111110000000123
Q ss_pred CCHHHHHHHHHhCCCcEEEEEec
Q 016921 297 CSTADYVKLLQSLSLEDIKAEDW 319 (380)
Q Consensus 297 ~~~~~~~~ll~~aGf~~v~~~~~ 319 (380)
++.++|.++|+++||+++++...
T Consensus 338 ~t~~e~~~ll~~aGf~~~~~~~~ 360 (372)
T 1fp1_D 338 RTEKQYEKLSKLSGFSKFQVACR 360 (372)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEEEEc
Confidence 68999999999999999988763
No 96
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.72 E-value=7.8e-17 Score=147.96 Aligned_cols=138 Identities=17% Similarity=0.204 Sum_probs=112.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ ++.++++|+.++++ +++||+|++..+++|
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-cCCccEEEEccchhh
Confidence 789999999999999999987 88999999999999999999988876 79999999999876 789999999999999
Q ss_pred CCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEE
Q 016921 239 MPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (380)
Q Consensus 239 ~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 316 (380)
+++ ...+++++.++|||||.+++.........+.. ......++.+++.++++ +|+++..
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~~~~--~~~~~~~ 257 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP-----------------LPFSFTFAENELKEYYK--DWEFLEY 257 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS-----------------SCCSCCBCTTHHHHHTT--TSEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC-----------------CCccccCCHHHHHHHhc--CCEEEEE
Confidence 954 56999999999999999887664432211110 11112357788999886 4988877
Q ss_pred Eec
Q 016921 317 EDW 319 (380)
Q Consensus 317 ~~~ 319 (380)
.+.
T Consensus 258 ~~~ 260 (286)
T 3m70_A 258 NEN 260 (286)
T ss_dssp ECC
T ss_pred Ecc
Confidence 543
No 97
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=8.6e-17 Score=137.84 Aligned_cols=106 Identities=10% Similarity=0.109 Sum_probs=87.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCCccEEEecc-c
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSME-S 235 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~~-~ 235 (380)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++++...++ .++++++.+...++ +.+++||+|++.. .
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 4889999999999999999998 89999999999999999999998887 68999998887753 4478899998763 2
Q ss_pred cCC-------C-CCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 236 GEH-------M-PDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 236 l~~-------~-~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
+.+ . .+...+++++.++|||||.+++..+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 222 1 23457889999999999999998753
No 98
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.70 E-value=4e-16 Score=137.06 Aligned_cols=128 Identities=17% Similarity=0.128 Sum_probs=105.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCCccEEEeccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~~~ 235 (380)
+.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|++++...++ .++.++++|+.+++ +++++||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 7899999999999999999987 68999999999999999999988887 58999999999876 67789999999866
Q ss_pred cCCCC--------CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 016921 236 GEHMP--------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQ 307 (380)
Q Consensus 236 l~~~~--------~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 307 (380)
..+.. ....+++++.++|||||.+++.... . . ..+.+.+.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-------~--------~---------------~~~~~~~~~~ 170 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN-------R--------G---------------LFEYSLVSFS 170 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC-------H--------H---------------HHHHHHHHHH
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC-------H--------H---------------HHHHHHHHHH
Confidence 54332 1257999999999999999986521 0 0 0245667888
Q ss_pred hCCCcEEEEE
Q 016921 308 SLSLEDIKAE 317 (380)
Q Consensus 308 ~aGf~~v~~~ 317 (380)
++||..+.+.
T Consensus 171 ~~g~~~~~~~ 180 (214)
T 1yzh_A 171 QYGMKLNGVW 180 (214)
T ss_dssp HHTCEEEEEE
T ss_pred HCCCeeeecc
Confidence 8899887765
No 99
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.69 E-value=3.7e-16 Score=147.86 Aligned_cols=147 Identities=16% Similarity=0.245 Sum_probs=111.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+++.+ +.+++++|+ +.+++.|++ . ++++++.+|+.+ +++ .||+|++..++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~p--~~D~v~~~~~l 256 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFT-SIP--NADAVLLKYIL 256 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTT-CCC--CCSEEEEESCG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C-CCcEEEeccccC-CCC--CccEEEeehhh
Confidence 37899999999999999999987 789999999 999887764 1 359999999976 555 39999999999
Q ss_pred CCCCCHH--HHHHHHHHhcCC---CcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCC
Q 016921 237 EHMPDKS--KFVSELARVTAP---AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSL 311 (380)
Q Consensus 237 ~~~~~~~--~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 311 (380)
||+++.. .++++++++||| ||++++.++..+...... .. ......+........ ...++.++|.++|+++||
T Consensus 257 h~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~-~~-~~~~~~~d~~~~~~~-g~~~t~~e~~~ll~~aGf 333 (352)
T 1fp2_A 257 HNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDEN-QV-TQIKLLMDVNMACLN-GKERNEEEWKKLFIEAGF 333 (352)
T ss_dssp GGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCH-HH-HHHHHHHHHHGGGGT-CCCEEHHHHHHHHHHTTC
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCcc-ch-hhhHhhccHHHHhcc-CCCCCHHHHHHHHHHCCC
Confidence 9998877 999999999999 999999997654321110 00 011111111111111 234689999999999999
Q ss_pred cEEEEEe
Q 016921 312 EDIKAED 318 (380)
Q Consensus 312 ~~v~~~~ 318 (380)
+++++..
T Consensus 334 ~~~~~~~ 340 (352)
T 1fp2_A 334 QHYKISP 340 (352)
T ss_dssp CEEEEEE
T ss_pred CeeEEEe
Confidence 9998765
No 100
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.68 E-value=3.6e-16 Score=140.64 Aligned_cols=116 Identities=28% Similarity=0.404 Sum_probs=95.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 139 ~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
...+..++...... ++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+. ++.++++|+.
T Consensus 27 ~~~~~~~~~~~~~~-----~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~ 98 (252)
T 1wzn_A 27 IDFVEEIFKEDAKR-----EVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVL 98 (252)
T ss_dssp HHHHHHHHHHTCSS-----CCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGG
T ss_pred HHHHHHHHHHhccc-----CCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChh
Confidence 34566666665443 3789999999999999999987 88999999999999999999887664 6999999999
Q ss_pred CCCCCCCCccEEEecc-ccCCCC--CHHHHHHHHHHhcCCCcEEEEEe
Q 016921 219 QQPFPDGQFDLVWSME-SGEHMP--DKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~-~l~~~~--~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+++++ ++||+|++.. .++++. +...+++++.++|||||.+++..
T Consensus 99 ~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 99 EIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 88764 7899999874 444543 46789999999999999998754
No 101
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.68 E-value=2.2e-16 Score=137.58 Aligned_cols=127 Identities=21% Similarity=0.173 Sum_probs=106.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++.. +.+.++|+.+.+ +++||+|++...++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV--DGKFDLIVANILAE 136 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC--CSCEEEEEEESCHH
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC--CCCceEEEECCcHH
Confidence 378999999999999999887534599999999999999999998888754 999999997753 58999999987765
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 317 (380)
+ ...+++++.++|||||++++.++... +.+++.++++++||++++..
T Consensus 137 ~---~~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 137 I---LLDLIPQLDSHLNEDGQVIFSGIDYL------------------------------QLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp H---HHHHGGGSGGGEEEEEEEEEEEEEGG------------------------------GHHHHHHHHHHTTEEEEEEE
T ss_pred H---HHHHHHHHHHhcCCCCEEEEEecCcc------------------------------cHHHHHHHHHHcCCceEEee
Confidence 4 47889999999999999999764311 35788899999999998876
Q ss_pred ecC
Q 016921 318 DWS 320 (380)
Q Consensus 318 ~~~ 320 (380)
...
T Consensus 184 ~~~ 186 (205)
T 3grz_A 184 RAG 186 (205)
T ss_dssp EET
T ss_pred ccC
Confidence 543
No 102
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.68 E-value=1.3e-16 Score=141.43 Aligned_cols=119 Identities=18% Similarity=0.260 Sum_probs=100.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCCCCC-CCCccEEEeccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQQPFP-DGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~-~~~fD~V~~~~~ 235 (380)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ .++++++++|+ ..+|++ +++||+|++.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-- 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSR-- 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEE--
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeC--
Confidence 3789999999999999999987 88999999999999999987 24799999999 567777 8899999987
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEE
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 315 (380)
.++..+++++.++|||||.++... ...+.+++.++++++||.++.
T Consensus 119 ----~~~~~~l~~~~~~LkpgG~l~~~~-------------------------------~~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 119 ----RGPTSVILRLPELAAPDAHFLYVG-------------------------------PRLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp ----SCCSGGGGGHHHHEEEEEEEEEEE-------------------------------SSSCCTHHHHHHHHTTCEEEE
T ss_pred ----CCHHHHHHHHHHHcCCCcEEEEeC-------------------------------CcCCHHHHHHHHHHCCCeEEE
Confidence 466788999999999999999111 012456889999999999988
Q ss_pred EEecC
Q 016921 316 AEDWS 320 (380)
Q Consensus 316 ~~~~~ 320 (380)
+....
T Consensus 164 ~~~~~ 168 (226)
T 3m33_A 164 EDHVS 168 (226)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 76543
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.68 E-value=4.2e-16 Score=137.54 Aligned_cols=145 Identities=12% Similarity=0.092 Sum_probs=107.7
Q ss_pred CCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCCCC
Q 016921 151 VSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFPDG 225 (380)
Q Consensus 151 ~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~ 225 (380)
+.....+|+.+|||+|||+|.++..+++.. ..+|+|+|+++.|++.+++++.+. +|+..+.+|.... +...+
T Consensus 70 l~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 70 LIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCC
T ss_pred hhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccc
Confidence 344455679999999999999999999986 468999999999999998877544 4799999988763 45568
Q ss_pred CccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 016921 226 QFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKL 305 (380)
Q Consensus 226 ~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 305 (380)
++|+|++. +.|..+...++.++.++|||||++++....... ... .+.-....+..+.
T Consensus 147 ~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~-------------d~~--------~p~~~~~~~ev~~ 203 (233)
T 4df3_A 147 GVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI-------------DVT--------TEPSEVYKREIKT 203 (233)
T ss_dssp CEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH-------------HHH--------TCCCHHHHHHHHH
T ss_pred eEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccC-------------CCC--------CChHHHHHHHHHH
Confidence 89999864 445567788999999999999999987521100 000 0000112344567
Q ss_pred HHhCCCcEEEEEecCC
Q 016921 306 LQSLSLEDIKAEDWSQ 321 (380)
Q Consensus 306 l~~aGf~~v~~~~~~~ 321 (380)
|+++||++++..++..
T Consensus 204 L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 204 LMDGGLEIKDVVHLDP 219 (233)
T ss_dssp HHHTTCCEEEEEECTT
T ss_pred HHHCCCEEEEEEccCC
Confidence 8999999998877654
No 104
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.68 E-value=8.6e-17 Score=141.64 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=105.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHH----HHcCCCCCeEEEEcCCCCCCCCCCCccEEEe
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALA----AARGLADKVSFQVGDALQQPFPDGQFDLVWS 232 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~----~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 232 (380)
++.+|||||||+|.++..+++.. +.+|+|+|+|+.|++.+.+.+ ...++ +++.++++|+.++++++++ |.|++
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-CEEEE
Confidence 38899999999999999999987 789999999999888643333 23344 4899999999999887666 77763
Q ss_pred cc---cc--CCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 016921 233 ME---SG--EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQ 307 (380)
Q Consensus 233 ~~---~l--~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 307 (380)
.. .+ +|++++..++++++++|||||.+++............ ..............+.+..+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~l~ 172 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVP------------EVGEHPEPTPDSADEWLAPRYA 172 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCG------------GGTTCCCCCHHHHHHHHHHHHH
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccccccc------------ccccCCccchHHHHHHHHHHHH
Confidence 32 22 2667778999999999999999999542211111000 0000000000012345788999
Q ss_pred hCCCcEEEEEecCC
Q 016921 308 SLSLEDIKAEDWSQ 321 (380)
Q Consensus 308 ~aGf~~v~~~~~~~ 321 (380)
++||++++++.+..
T Consensus 173 ~aGf~i~~~~~~~~ 186 (218)
T 3mq2_A 173 EAGWKLADCRYLEP 186 (218)
T ss_dssp HTTEEEEEEEEECH
T ss_pred HcCCCceeeeccch
Confidence 99999999887664
No 105
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.68 E-value=3.4e-16 Score=145.69 Aligned_cols=108 Identities=19% Similarity=0.170 Sum_probs=91.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC------CCCCeEEEEcCCCCCC----CC--CC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG------LADKVSFQVGDALQQP----FP--DG 225 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~----~~--~~ 225 (380)
++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.++++....+ ...++.++++|+.+++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 378999999999999999987546799999999999999999886542 2247999999999875 53 45
Q ss_pred CccEEEeccccCCC-C---CHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 226 QFDLVWSMESGEHM-P---DKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 226 ~fD~V~~~~~l~~~-~---~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
+||+|++..+++|+ . +...+++++.++|||||.+++..+.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 89999999999987 3 3578999999999999999998763
No 106
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.67 E-value=5.1e-16 Score=138.00 Aligned_cols=135 Identities=16% Similarity=0.217 Sum_probs=102.9
Q ss_pred CCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----CCCCCCCccEEE
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----QPFPDGQFDLVW 231 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~V~ 231 (380)
.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.+++++... .++.++.+|+.+ .+++ ++||+|+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~-~~~D~v~ 148 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIV-EKVDVIY 148 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTS-CCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccC-ccEEEEE
Confidence 3588999999999999999999863 79999999999999999876543 589999999988 6665 7899998
Q ss_pred eccccCCCCCH---HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 016921 232 SMESGEHMPDK---SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQS 308 (380)
Q Consensus 232 ~~~~l~~~~~~---~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 308 (380)
++++++ ..+++++.++|||||++++. +........ ... .. ...+++. +|++
T Consensus 149 -----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~---~~~--~~--------------~~~~~l~-~l~~ 202 (230)
T 1fbn_A 149 -----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVT---KDP--KE--------------IFKEQKE-ILEA 202 (230)
T ss_dssp -----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSS---SCH--HH--------------HHHHHHH-HHHH
T ss_pred -----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCC---CCH--HH--------------hhHHHHH-HHHH
Confidence 345555 77899999999999999997 321111000 000 01 0136677 8999
Q ss_pred CCCcEEEEEecCC
Q 016921 309 LSLEDIKAEDWSQ 321 (380)
Q Consensus 309 aGf~~v~~~~~~~ 321 (380)
+||+.++...+..
T Consensus 203 ~Gf~~~~~~~~~~ 215 (230)
T 1fbn_A 203 GGFKIVDEVDIEP 215 (230)
T ss_dssp HTEEEEEEEECTT
T ss_pred CCCEEEEEEccCC
Confidence 9999998876643
No 107
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.67 E-value=2e-16 Score=141.57 Aligned_cols=130 Identities=15% Similarity=0.099 Sum_probs=106.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC---CCCccEEEec
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP---DGQFDLVWSM 233 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~V~~~ 233 (380)
++.+|||||||+|..+..++... +.+|+|+|+|+.+++.|++++...++. +++++++|+.+++++ +++||+|++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEEEe
Confidence 47899999999999999999755 789999999999999999999888874 699999999887653 5789999986
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcE
Q 016921 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLED 313 (380)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 313 (380)
. +.+...+++++.++|||||.+++..-.. .. . ..+++.+.++++||++
T Consensus 149 ~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~---------~~----~---------------~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 149 A----VARLSVLSELCLPLVKKNGLFVALKAAS---------AE----E---------------ELNAGKKAITTLGGEL 196 (240)
T ss_dssp C----CSCHHHHHHHHGGGEEEEEEEEEEECC----------CH----H---------------HHHHHHHHHHHTTEEE
T ss_pred c----cCCHHHHHHHHHHhcCCCCEEEEEeCCC---------ch----H---------------HHHHHHHHHHHcCCeE
Confidence 6 4678999999999999999998864110 00 0 1246678899999999
Q ss_pred EEEEecC
Q 016921 314 IKAEDWS 320 (380)
Q Consensus 314 v~~~~~~ 320 (380)
++...+.
T Consensus 197 ~~~~~~~ 203 (240)
T 1xdz_A 197 ENIHSFK 203 (240)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 8877654
No 108
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.67 E-value=6.1e-16 Score=135.89 Aligned_cols=104 Identities=22% Similarity=0.172 Sum_probs=89.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCCccEEEeccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~~~ 235 (380)
+.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|++++...++ .++.++++|+.+++ +++++||.|++.+.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 7799999999999999999987 68999999999999999999988887 57999999998865 67889999988655
Q ss_pred cCCCCC--------HHHHHHHHHHhcCCCcEEEEEe
Q 016921 236 GEHMPD--------KSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 236 l~~~~~--------~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
..+... ...+++++.++|||||.|++..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 443321 2678999999999999999875
No 109
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.67 E-value=1.1e-15 Score=131.55 Aligned_cols=107 Identities=15% Similarity=0.050 Sum_probs=93.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCCccEEEeccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~~~ 235 (380)
++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++...++ ++++++++|+.+++ +++++||+|++...
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 3789999999999999988876445899999999999999999988887 68999999998763 44689999999888
Q ss_pred cCCC-CCHHHHHHHHHH--hcCCCcEEEEEecc
Q 016921 236 GEHM-PDKSKFVSELAR--VTAPAGTIIIVTWC 265 (380)
Q Consensus 236 l~~~-~~~~~~l~~~~r--~LkpgG~l~~~~~~ 265 (380)
+++. .+...+++++.+ +|+|||.+++....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 7765 678899999999 99999999997754
No 110
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.67 E-value=2.6e-17 Score=145.78 Aligned_cols=152 Identities=14% Similarity=0.068 Sum_probs=99.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCC-HHHHHHH---HHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEe
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLS-PVQAQRA---NALAAARGLADKVSFQVGDALQQPFPDGQFDLVWS 232 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s-~~~~~~a---~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 232 (380)
++.+|||||||+|.++..+++.. +.+|+|+|+| +.|++.| ++++...++ .++.|+++|++++| ...+|.|.+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~--~~~~d~v~~ 100 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLP--FELKNIADS 100 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCC--GGGTTCEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhh--hhccCeEEE
Confidence 37899999999999999999655 7899999999 6677666 776666666 47999999999885 223354444
Q ss_pred ccccCCC--------CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHH
Q 016921 233 MESGEHM--------PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVK 304 (380)
Q Consensus 233 ~~~l~~~--------~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (380)
..+...+ .+...++++++++|||||.+++.......... .. ..... .....+.+...+++..
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~----~~----~~~~~--~~~~~~~~~~~~el~~ 170 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEE----AE----IKKRG--LPLLSKAYFLSEQYKA 170 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC------------------------CCHHHHHSHHHHH
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchh----ch----hhhcC--CCCCChhhcchHHHHH
Confidence 4433222 12356899999999999999994422111100 00 00000 0000011112235999
Q ss_pred HHHhCCCcEEEEEecCCC
Q 016921 305 LLQSLSLEDIKAEDWSQN 322 (380)
Q Consensus 305 ll~~aGf~~v~~~~~~~~ 322 (380)
+++++||+++..+.+..+
T Consensus 171 ~l~~aGf~v~~~~~~~~~ 188 (225)
T 3p2e_A 171 ELSNSGFRIDDVKELDNE 188 (225)
T ss_dssp HHHHHTCEEEEEEEECHH
T ss_pred HHHHcCCCeeeeeecCHH
Confidence 999999999998877754
No 111
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.67 E-value=1.2e-15 Score=135.39 Aligned_cols=130 Identities=13% Similarity=0.060 Sum_probs=104.3
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCCccEEEeccc
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V~~~~~ 235 (380)
++.+|||+||| +|.++..+++..+.+|+|+|+|+.+++.|++++...++ +++++++|+..+ ++++++||+|++.-.
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEECCC
Confidence 48999999999 99999999987678999999999999999999988876 799999997543 455689999998865
Q ss_pred cCCCCC-------------------HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCC
Q 016921 236 GEHMPD-------------------KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW 296 (380)
Q Consensus 236 l~~~~~-------------------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (380)
+++..+ ...+++++.++|||||++++......
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------------------- 183 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE----------------------------- 183 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-----------------------------
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-----------------------------
Confidence 544332 47899999999999999999642100
Q ss_pred CCHHHHHHHHHhCCCcEEEEEe
Q 016921 297 CSTADYVKLLQSLSLEDIKAED 318 (380)
Q Consensus 297 ~~~~~~~~ll~~aGf~~v~~~~ 318 (380)
...+++.++++++||....++.
T Consensus 184 ~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 184 KLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHHHcCCceEEEEe
Confidence 1246788899999998776643
No 112
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.67 E-value=8.5e-16 Score=139.08 Aligned_cols=131 Identities=18% Similarity=0.140 Sum_probs=107.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCCccEEEeccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~~~ 235 (380)
++.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++...++.+++.++++|+.+++ +++++||+|+++-.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 3889999999999999999988555999999999999999999999998888999999998864 45789999999644
Q ss_pred cCCC--------------------CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCC
Q 016921 236 GEHM--------------------PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPA 295 (380)
Q Consensus 236 l~~~--------------------~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (380)
+... .+...+++.+.++|||||++++....
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------------------------------ 178 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP------------------------------ 178 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT------------------------------
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH------------------------------
Confidence 3322 12357999999999999999996410
Q ss_pred CCCHHHHHHHHHhCCCcEEEEEec
Q 016921 296 WCSTADYVKLLQSLSLEDIKAEDW 319 (380)
Q Consensus 296 ~~~~~~~~~ll~~aGf~~v~~~~~ 319 (380)
....++...+++.||....+..+
T Consensus 179 -~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 -ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred -HHHHHHHHHHHHCCCceEEEEEe
Confidence 23567778889999998877654
No 113
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.66 E-value=1.4e-15 Score=139.00 Aligned_cols=140 Identities=15% Similarity=0.218 Sum_probs=111.9
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC
Q 016921 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (380)
Q Consensus 139 ~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 217 (380)
..+++.++..+. . ++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+++++...+++ ++.++++|+
T Consensus 96 e~l~~~~l~~~~-~-----~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~ 168 (276)
T 2b3t_A 96 ECLVEQALARLP-E-----QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDW 168 (276)
T ss_dssp HHHHHHHHHHSC-S-----SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCST
T ss_pred HHHHHHHHHhcc-c-----CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcch
Confidence 345666666654 2 37899999999999999999876 689999999999999999999888874 799999999
Q ss_pred CCCCCCCCCccEEEecc-------------ccCCCC------------CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCC
Q 016921 218 LQQPFPDGQFDLVWSME-------------SGEHMP------------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPS 272 (380)
Q Consensus 218 ~~~~~~~~~fD~V~~~~-------------~l~~~~------------~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~ 272 (380)
.+. +++++||+|+++- +++|.+ +...+++++.++|||||++++...
T Consensus 169 ~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~-------- 239 (276)
T 2b3t_A 169 FSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG-------- 239 (276)
T ss_dssp TGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC--------
T ss_pred hhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC--------
Confidence 873 4467899999972 333332 346789999999999999998631
Q ss_pred ccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 016921 273 EESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 317 (380)
+...+++.++++++||+.+++.
T Consensus 240 -----------------------~~~~~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 240 -----------------------WQQGEAVRQAFILAGYHDVETC 261 (276)
T ss_dssp -----------------------SSCHHHHHHHHHHTTCTTCCEE
T ss_pred -----------------------chHHHHHHHHHHHCCCcEEEEE
Confidence 1346789999999999877654
No 114
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.66 E-value=2.8e-16 Score=138.52 Aligned_cols=104 Identities=19% Similarity=0.250 Sum_probs=89.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C--CCCCCccEEEecc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P--FPDGQFDLVWSME 234 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~~~~~fD~V~~~~ 234 (380)
+.+|||||||+|.++..+++.. +..|+|+|+|+.+++.|++++...++. ++.++++|+.++ + +++++||.|++.+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 7799999999999999999987 679999999999999999999888874 799999998874 3 6789999999886
Q ss_pred ccCCCCCH--------HHHHHHHHHhcCCCcEEEEEe
Q 016921 235 SGEHMPDK--------SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 235 ~l~~~~~~--------~~~l~~~~r~LkpgG~l~~~~ 263 (380)
...+.... ..+++++.++|||||.+++..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 55443222 259999999999999999976
No 115
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.66 E-value=3.3e-16 Score=147.58 Aligned_cols=124 Identities=14% Similarity=0.216 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHH-------HHcCC-CC
Q 016921 138 QVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALA-------AARGL-AD 208 (380)
Q Consensus 138 ~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~-------~~~~~-~~ 208 (380)
....+..++..+.+.+ +.+|||||||+|.++..++...++ +|+|||+++.+++.|+++. ...|+ ..
T Consensus 158 ~~~~i~~il~~l~l~~-----gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~ 232 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTD-----DDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHA 232 (438)
T ss_dssp HHHHHHHHHHHHCCCT-----TCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCC
T ss_pred CHHHHHHHHHhcCCCC-----CCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3456677777777665 899999999999999999987765 5999999999999998754 33454 36
Q ss_pred CeEEEEcCCCCCCCCC--CCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCC
Q 016921 209 KVSFQVGDALQQPFPD--GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHR 267 (380)
Q Consensus 209 ~v~~~~~d~~~~~~~~--~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~ 267 (380)
+++|+++|+.++++++ ..||+|+++..+ +.++....|.+++++|||||+|++.+....
T Consensus 233 rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 233 EYTLERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp EEEEEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CeEEEECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 8999999999987643 479999987665 457888999999999999999999886543
No 116
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.66 E-value=2.6e-16 Score=136.23 Aligned_cols=108 Identities=17% Similarity=0.228 Sum_probs=92.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCCccEEEecc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~~ 234 (380)
++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++...++..+++++++|+.+++ +.+++||+|++..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 38899999999999999999985 36999999999999999999998887678999999998875 5568999999876
Q ss_pred ccCC-----C----CCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 235 SGEH-----M----PDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 235 ~l~~-----~----~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
.+.. + .+...+++++.++|||||++++..+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 5411 1 13467999999999999999998754
No 117
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.65 E-value=1.5e-15 Score=130.50 Aligned_cols=117 Identities=14% Similarity=0.154 Sum_probs=98.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~ 219 (380)
..+.++..+... ++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...++.. ++.++.+|+.+
T Consensus 40 ~~~~l~~~~~~~-----~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 40 GTKILVENVVVD-----KDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHCCCC-----TTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT
T ss_pred HHHHHHHHcccC-----CCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc
Confidence 344555666544 3889999999999999999988 8899999999999999999998877743 49999999987
Q ss_pred CCCCCCCccEEEeccccCCC-CCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 220 QPFPDGQFDLVWSMESGEHM-PDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~-~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
. +++++||+|++...+++. .+...+++++.++|+|||.+++...
T Consensus 114 ~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 114 N-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp T-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 4 456799999998887763 5668899999999999999999874
No 118
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.65 E-value=3.5e-16 Score=133.04 Aligned_cols=119 Identities=13% Similarity=0.113 Sum_probs=95.2
Q ss_pred CCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC---CCCCccEEEec
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF---PDGQFDLVWSM 233 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~fD~V~~~ 233 (380)
.++.+|||||||. +++|+|+.|++.|+++.. .++.+.++|+.++++ ++++||+|++.
T Consensus 11 ~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp CTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred CCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEeEEEEC
Confidence 3499999999996 238999999999998753 258999999999876 78999999999
Q ss_pred cccCCC-CCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCc
Q 016921 234 ESGEHM-PDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLE 312 (380)
Q Consensus 234 ~~l~~~-~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 312 (380)
.+++|+ ++...++++++++|||||++++.+....... .. ....+.+++.++|+++||
T Consensus 71 ~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~------------------~~---~~~~~~~~~~~~l~~aGf- 128 (176)
T 2ld4_A 71 LVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD------------------NN---SKVKTASKLCSALTLSGL- 128 (176)
T ss_dssp CSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC------------------SS---SSSCCHHHHHHHHHHTTC-
T ss_pred ChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc------------------cc---cccCCHHHHHHHHHHCCC-
Confidence 999999 8999999999999999999999654221100 00 112478999999999999
Q ss_pred EEEEEe
Q 016921 313 DIKAED 318 (380)
Q Consensus 313 ~v~~~~ 318 (380)
+. +..
T Consensus 129 i~-~~~ 133 (176)
T 2ld4_A 129 VE-VKE 133 (176)
T ss_dssp EE-EEE
T ss_pred cE-eec
Confidence 43 444
No 119
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.65 E-value=1.3e-15 Score=137.02 Aligned_cols=132 Identities=13% Similarity=0.012 Sum_probs=107.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC---CCCccEEEe
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP---DGQFDLVWS 232 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~V~~ 232 (380)
.++.+|||||||+|..+..++... +.+|+++|+|+.+++.|++++...++. +++++++|+++++.. +++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEEE
Confidence 358899999999999999999876 789999999999999999999988885 699999999887542 479999998
Q ss_pred ccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCc
Q 016921 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLE 312 (380)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 312 (380)
.. +.+...+++.+.++|||||++++..-.. . . . ...++.+.++..||.
T Consensus 158 ~a----~~~~~~ll~~~~~~LkpgG~l~~~~g~~----~-----~----~---------------e~~~~~~~l~~~G~~ 205 (249)
T 3g89_A 158 RA----VAPLCVLSELLLPFLEVGGAAVAMKGPR----V-----E----E---------------ELAPLPPALERLGGR 205 (249)
T ss_dssp ES----SCCHHHHHHHHGGGEEEEEEEEEEECSC----C-----H----H---------------HHTTHHHHHHHHTEE
T ss_pred CC----cCCHHHHHHHHHHHcCCCeEEEEEeCCC----c-----H----H---------------HHHHHHHHHHHcCCe
Confidence 64 3577899999999999999998865210 0 0 0 123466778888999
Q ss_pred EEEEEecCC
Q 016921 313 DIKAEDWSQ 321 (380)
Q Consensus 313 ~v~~~~~~~ 321 (380)
++++..+..
T Consensus 206 ~~~~~~~~~ 214 (249)
T 3g89_A 206 LGEVLALQL 214 (249)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeeC
Confidence 998877643
No 120
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.65 E-value=1.2e-15 Score=137.52 Aligned_cols=137 Identities=18% Similarity=0.277 Sum_probs=113.5
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
..++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|+++++..+++++++++++|+.+.
T Consensus 83 ~~i~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 83 ALIVAYAGISP-----GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred HHHHHhhCCCC-----CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 34555555544 8999999999999999999984 6899999999999999999999888877799999999864
Q ss_pred CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016921 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
+++++||+|++ +.+++..+++++.++|+|||.+++..... ...+
T Consensus 158 -~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~~~~ 201 (255)
T 3mb5_A 158 -IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCS------------------------------NQVM 201 (255)
T ss_dssp -CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSH------------------------------HHHH
T ss_pred -cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCH------------------------------HHHH
Confidence 66788999997 45677889999999999999999976310 0235
Q ss_pred HHHHHHHhCC--CcEEEEEecC
Q 016921 301 DYVKLLQSLS--LEDIKAEDWS 320 (380)
Q Consensus 301 ~~~~ll~~aG--f~~v~~~~~~ 320 (380)
++.++++++| |..++..+..
T Consensus 202 ~~~~~l~~~g~~f~~~~~~e~~ 223 (255)
T 3mb5_A 202 RLHEKLREFKDYFMKPRTINVL 223 (255)
T ss_dssp HHHHHHHHTGGGBSCCEEECCC
T ss_pred HHHHHHHHcCCCccccEEEEEe
Confidence 6778999999 9988776543
No 121
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=1.8e-15 Score=132.32 Aligned_cols=111 Identities=17% Similarity=0.192 Sum_probs=96.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.+..++..+.+.+ +.+|||||||+|.++..+++. +.+|+++|+++.+++.|++++...++. +++++.+|+.+.
T Consensus 65 ~~~~~~~~l~~~~-----~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 137 (210)
T 3lbf_A 65 MVARMTELLELTP-----QSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred HHHHHHHhcCCCC-----CCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccC
Confidence 4555566665544 899999999999999999998 899999999999999999999888775 799999999886
Q ss_pred CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
..++++||+|++..+++|+++ ++.++|||||++++...
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEEC
T ss_pred CccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEc
Confidence 656789999999999999976 58999999999999764
No 122
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.65 E-value=1.1e-15 Score=129.39 Aligned_cols=119 Identities=13% Similarity=0.084 Sum_probs=99.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||+|||+|.++..+++. + +|+|+|+|+.|++. ..+++++++|+.+ ++++++||+|+++..+++
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES----------HRGGNLVRADLLC-SINQESVDVVVFNPPYVP 90 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT----------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBT
T ss_pred CCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc----------ccCCeEEECChhh-hcccCCCCEEEECCCCcc
Confidence 679999999999999999987 5 99999999999986 2579999999988 556689999999888876
Q ss_pred CCCH---------HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhC
Q 016921 239 MPDK---------SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSL 309 (380)
Q Consensus 239 ~~~~---------~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 309 (380)
.++. ..+++++.+.| |||.+++..... ...+++.++++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------------~~~~~l~~~l~~~ 139 (170)
T 3q87_B 91 DTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------------NRPKEVLARLEER 139 (170)
T ss_dssp TCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG------------------------------GCHHHHHHHHHHT
T ss_pred CCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC------------------------------CCHHHHHHHHHHC
Confidence 5443 57889999999 999999987321 2467889999999
Q ss_pred CCcEEEEEecCC
Q 016921 310 SLEDIKAEDWSQ 321 (380)
Q Consensus 310 Gf~~v~~~~~~~ 321 (380)
||+.+.+.....
T Consensus 140 gf~~~~~~~~~~ 151 (170)
T 3q87_B 140 GYGTRILKVRKI 151 (170)
T ss_dssp TCEEEEEEEEEC
T ss_pred CCcEEEEEeecc
Confidence 999887765443
No 123
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.64 E-value=3.9e-15 Score=126.69 Aligned_cols=132 Identities=17% Similarity=0.151 Sum_probs=108.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
+...++..+...+ +.+|||+|||+|.++..+++ .+.+|+|+|+++.+++.+++++...++ +++.++++|+.+
T Consensus 23 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~- 94 (183)
T 2yxd_A 23 IRAVSIGKLNLNK-----DDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-
T ss_pred HHHHHHHHcCCCC-----CCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-
Confidence 3444455555443 78999999999999999998 478999999999999999999988887 579999999887
Q ss_pred CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016921 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
++++++||+|++..+ .+...+++++.++ |||.+++..... ....
T Consensus 95 ~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~------------------------------~~~~ 138 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVL------------------------------ENAA 138 (183)
T ss_dssp HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCH------------------------------HHHH
T ss_pred cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccc------------------------------ccHH
Confidence 666689999999887 6788999999999 999999987321 0235
Q ss_pred HHHHHHHhCCCcEEEE
Q 016921 301 DYVKLLQSLSLEDIKA 316 (380)
Q Consensus 301 ~~~~ll~~aGf~~v~~ 316 (380)
++.+.++++||.+..+
T Consensus 139 ~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 139 KIINEFESRGYNVDAV 154 (183)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCeEEEE
Confidence 6788999999876554
No 124
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.64 E-value=1.9e-15 Score=136.26 Aligned_cols=135 Identities=14% Similarity=0.203 Sum_probs=111.2
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCC
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQ 219 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~ 219 (380)
..++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|++++... + ..++.+..+|+.+
T Consensus 86 ~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 86 SAMVTLLDLAP-----GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEE 159 (258)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGG
T ss_pred HHHHHHcCCCC-----CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhh
Confidence 44555555544 8899999999999999999984 679999999999999999998876 6 4689999999998
Q ss_pred CCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCH
Q 016921 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCST 299 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (380)
.++++++||+|++ +.+++..+++++.++|+|||.+++..... . ..
T Consensus 160 ~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~---------------~---------------~~ 204 (258)
T 2pwy_A 160 AELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNI---------------T---------------QV 204 (258)
T ss_dssp CCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCH---------------H---------------HH
T ss_pred cCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH---------------H---------------HH
Confidence 8777789999997 45677789999999999999999987310 0 13
Q ss_pred HHHHHHHHhCCCcEEEEEe
Q 016921 300 ADYVKLLQSLSLEDIKAED 318 (380)
Q Consensus 300 ~~~~~ll~~aGf~~v~~~~ 318 (380)
.++.+.|+++||..++..+
T Consensus 205 ~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 205 LELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp HHHHHHHTTTTEEEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEE
Confidence 4666788889999887654
No 125
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.64 E-value=1.3e-16 Score=143.99 Aligned_cols=168 Identities=13% Similarity=0.113 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc
Q 016921 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVG 215 (380)
Q Consensus 137 ~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 215 (380)
....++..++..+... ..++.+|||+|||+|.++..++... +.+|+|+|+|+.|++.|++++...++.++++++++
T Consensus 47 ~~~~~~~~~~~~~~~~---~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 123 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSD---KSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKV 123 (254)
T ss_dssp HHHHHHHHHHCCCCGG---GCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHHHHHHHHhhcccc---CCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEc
Confidence 3444555555433211 0147799999999999999998876 78999999999999999999998888777999999
Q ss_pred CCCCC---CCC---CCCccEEEeccccCCCC---------------CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCcc
Q 016921 216 DALQQ---PFP---DGQFDLVWSMESGEHMP---------------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEE 274 (380)
Q Consensus 216 d~~~~---~~~---~~~fD~V~~~~~l~~~~---------------~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~ 274 (380)
|+.+. +++ +++||+|++.-..++.. ....++.+++++|||||.+.+.+..
T Consensus 124 d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~--------- 194 (254)
T 2h00_A 124 PQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRI--------- 194 (254)
T ss_dssp CTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHH---------
T ss_pred chhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHH---------
Confidence 98762 344 26899999985444332 1134678899999999998775421
Q ss_pred ccchHHHHHHHHHhhccC----CCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 016921 275 SLQPWEQELLKKICDAYY----LPAWCSTADYVKLLQSLSLEDIKAEDWSQ 321 (380)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ll~~aGf~~v~~~~~~~ 321 (380)
............. .......+++.++|+++||+.+++..+..
T Consensus 195 -----~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~ 240 (254)
T 2h00_A 195 -----IHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQ 240 (254)
T ss_dssp -----HHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEEEE
T ss_pred -----HHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEEec
Confidence 0011111111110 01123458899999999999998776543
No 126
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.64 E-value=9.5e-16 Score=145.98 Aligned_cols=103 Identities=22% Similarity=0.288 Sum_probs=92.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ +++++++|+.+.+.++++||+|+++..++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhccccCCCeEEEEECCchh
Confidence 3789999999999999999987 88999999999999999999988775 38999999999876668999999998888
Q ss_pred C-----CCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 238 H-----MPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 238 ~-----~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+ ..+...+++++.++|||||.+++..
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 7 3456789999999999999999976
No 127
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.64 E-value=2.1e-15 Score=129.37 Aligned_cols=131 Identities=22% Similarity=0.321 Sum_probs=105.9
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF 222 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 222 (380)
..++..+.+.+ +.+|||+|||+|.++..+++.. .+|+|+|+++.+++.+++++...++..++.+..+|+.+ ++
T Consensus 23 ~~~~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~ 95 (192)
T 1l3i_A 23 CLIMCLAEPGK-----NDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-AL 95 (192)
T ss_dssp HHHHHHHCCCT-----TCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HH
T ss_pred HHHHHhcCCCC-----CCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hc
Confidence 33444444443 8899999999999999999874 89999999999999999999888876789999999876 23
Q ss_pred CC-CCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHH
Q 016921 223 PD-GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTAD 301 (380)
Q Consensus 223 ~~-~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (380)
+. ++||+|++...++ +...+++++.++|+|||.+++..... .+..+
T Consensus 96 ~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~------------------------------~~~~~ 142 (192)
T 1l3i_A 96 CKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAILL------------------------------ETKFE 142 (192)
T ss_dssp TTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECBH------------------------------HHHHH
T ss_pred ccCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecCc------------------------------chHHH
Confidence 33 5899999987765 56889999999999999999976320 12457
Q ss_pred HHHHHHhCCCcE
Q 016921 302 YVKLLQSLSLED 313 (380)
Q Consensus 302 ~~~ll~~aGf~~ 313 (380)
+.+++++.||..
T Consensus 143 ~~~~l~~~g~~~ 154 (192)
T 1l3i_A 143 AMECLRDLGFDV 154 (192)
T ss_dssp HHHHHHHTTCCC
T ss_pred HHHHHHHCCCce
Confidence 788999999943
No 128
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.64 E-value=2.4e-15 Score=137.52 Aligned_cols=129 Identities=17% Similarity=0.086 Sum_probs=106.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++.++++++++|+.+++. +++||+|++...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-- 201 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-- 201 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc--
Confidence 38899999999999999999974337999999999999999999998887779999999999865 689999998533
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 315 (380)
.+...++.++.++|||||.+++.+........ -...+.+.+.++++||+...
T Consensus 202 --~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~------------------------~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 --VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP------------------------REPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp --SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT------------------------TTTHHHHHHHHHHTTCEEEE
T ss_pred --hhHHHHHHHHHHHCCCCeEEEEEEeecccccc------------------------ccHHHHHHHHHHHcCCeeEE
Confidence 34467899999999999999998864311100 02457788999999998776
No 129
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.64 E-value=1.5e-15 Score=143.97 Aligned_cols=148 Identities=19% Similarity=0.261 Sum_probs=110.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ . .+++++.+|+.+ +++ .||+|++..++|
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh 262 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SIP--SADAVLLKWVLH 262 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CCC--CCSEEEEESCGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CCC--CceEEEEccccc
Confidence 6899999999999999999987 679999999 788876653 2 469999999987 665 499999999999
Q ss_pred CCCCHH--HHHHHHHHhcCC---CcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCc
Q 016921 238 HMPDKS--KFVSELARVTAP---AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLE 312 (380)
Q Consensus 238 ~~~~~~--~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 312 (380)
|+++.. .++++++++||| ||++++.++..+...... .. ......+............++.++|.++|+++||+
T Consensus 263 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~-~~-~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 340 (358)
T 1zg3_A 263 DWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDR-GL-TELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFS 340 (358)
T ss_dssp GSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCH-HH-HHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccc-hh-hhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCC
Confidence 999876 999999999999 999999987654322110 00 01111111100000111246899999999999999
Q ss_pred EEEEEec
Q 016921 313 DIKAEDW 319 (380)
Q Consensus 313 ~v~~~~~ 319 (380)
++++...
T Consensus 341 ~~~~~~~ 347 (358)
T 1zg3_A 341 SYKITPI 347 (358)
T ss_dssp EEEEEEE
T ss_pred eeEEEec
Confidence 9988764
No 130
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.63 E-value=1.2e-15 Score=139.23 Aligned_cols=125 Identities=15% Similarity=0.202 Sum_probs=105.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCCCCCCCCccEEEecc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQQPFPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 234 (380)
++.+|||+|||+|.++..+++.. +.+|+|+|+++.+++.|++++... +. ++++++++|+.+ ++++++||+|++
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~-~~~~~~fD~Vi~-- 185 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD-FISDQMYDAVIA-- 185 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-CCCSCCEEEEEE--
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-cCcCCCccEEEE--
Confidence 48899999999999999999873 689999999999999999999876 64 589999999988 566789999998
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEE
Q 016921 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v 314 (380)
+++++..+++++.++|||||++++.+... ...+++.+.++++||..+
T Consensus 186 ---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~------------------------------~~~~~~~~~l~~~Gf~~~ 232 (275)
T 1yb2_A 186 ---DIPDPWNHVQKIASMMKPGSVATFYLPNF------------------------------DQSEKTVLSLSASGMHHL 232 (275)
T ss_dssp ---CCSCGGGSHHHHHHTEEEEEEEEEEESSH------------------------------HHHHHHHHHSGGGTEEEE
T ss_pred ---cCcCHHHHHHHHHHHcCCCCEEEEEeCCH------------------------------HHHHHHHHHHHHCCCeEE
Confidence 66788899999999999999999987310 013567778889999988
Q ss_pred EEEec
Q 016921 315 KAEDW 319 (380)
Q Consensus 315 ~~~~~ 319 (380)
+..+.
T Consensus 233 ~~~~~ 237 (275)
T 1yb2_A 233 ETVEL 237 (275)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87653
No 131
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.63 E-value=2.8e-15 Score=141.01 Aligned_cols=102 Identities=23% Similarity=0.238 Sum_probs=90.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecc---
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSME--- 234 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~--- 234 (380)
++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++..++.+++.++++|+.++++++++||+|++..
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 3889999999999999999987334999999997 999999999988887899999999999888888999999876
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCcEEE
Q 016921 235 SGEHMPDKSKFVSELARVTAPAGTII 260 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~ 260 (380)
.+.+..+...+++++.++|||||.++
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 45555677889999999999999987
No 132
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.62 E-value=7.3e-16 Score=134.85 Aligned_cols=104 Identities=22% Similarity=0.291 Sum_probs=90.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++....+|+|+|+|+.+++.++++... ..++.++++|+.++++++++||+|++..+++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 3789999999999999999987323899999999999999988753 2479999999999888889999999988876
Q ss_pred CCC---------------CHHHHHHHHHHhcCCCcEEEEEec
Q 016921 238 HMP---------------DKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 238 ~~~---------------~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
++. +...+++++.++|||||.+++.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 654 568899999999999999999885
No 133
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.61 E-value=2e-15 Score=135.87 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=86.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.++.++..+.+.+ +.+|||||||+|.++..++++ +.+|+|+|+|+.|++.|++++... ++..++.+.
T Consensus 33 ~~~~il~~l~l~~-----g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~ 99 (261)
T 3iv6_A 33 DRENDIFLENIVP-----GSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDI 99 (261)
T ss_dssp HHHHHHHTTTCCT-----TCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCT
T ss_pred HHHHHHHhcCCCC-----cCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc-------cceeeeeec
Confidence 3455566665554 899999999999999999987 889999999999999999887432 222333332
Q ss_pred CC-----CCCCccEEEeccccCCCC--CHHHHHHHHHHhcCCCcEEEEEec
Q 016921 221 PF-----PDGQFDLVWSMESGEHMP--DKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 221 ~~-----~~~~fD~V~~~~~l~~~~--~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+. .+++||+|++..+++|+. +...+++++.++| |||+++++..
T Consensus 100 ~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 100 TAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp TSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred ccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 22 257899999999999985 4567999999999 9999999763
No 134
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.61 E-value=4.2e-15 Score=129.55 Aligned_cols=99 Identities=16% Similarity=0.117 Sum_probs=88.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
+.+|||+|||+|.++..++... +.+++|+|+|+.+++.+++++...++. ++.+.++|+.+.+ +.++||+|++..
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-~~~~~D~i~~~~--- 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP-SEPPFDGVISRA--- 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC-CCSCEEEEECSC---
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC-ccCCcCEEEEec---
Confidence 6799999999999999999876 689999999999999999999888774 4999999998875 457899999753
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+.+...+++++.++|+|||.+++..
T Consensus 141 -~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 -FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp -SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred -cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3577899999999999999999974
No 135
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.61 E-value=2.4e-16 Score=137.83 Aligned_cols=143 Identities=16% Similarity=0.141 Sum_probs=91.5
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC
Q 016921 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (380)
Q Consensus 139 ~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 217 (380)
..+++.++..+... .++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+++++...+. +++++++|+
T Consensus 15 ~~~~~~~~~~l~~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~ 88 (215)
T 4dzr_A 15 EVLVEEAIRFLKRM----PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADG 88 (215)
T ss_dssp HHHHHHHHHHHTTC----CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHH
T ss_pred HHHHHHHHHHhhhc----CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcch
Confidence 44566666665431 248899999999999999999986 66999999999999999998877665 788999998
Q ss_pred CCCCCCC-----CCccEEEeccccCCCCCH--------------------------HHHHHHHHHhcCCCcEEEEEeccC
Q 016921 218 LQQPFPD-----GQFDLVWSMESGEHMPDK--------------------------SKFVSELARVTAPAGTIIIVTWCH 266 (380)
Q Consensus 218 ~~~~~~~-----~~fD~V~~~~~l~~~~~~--------------------------~~~l~~~~r~LkpgG~l~~~~~~~ 266 (380)
.+ ++++ ++||+|++...+++..+. ..+++++.++|||||++++.+..
T Consensus 89 ~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~- 166 (215)
T 4dzr_A 89 IE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG- 166 (215)
T ss_dssp HH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT-
T ss_pred Hh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC-
Confidence 77 4444 899999996444332211 67889999999999995555421
Q ss_pred CCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHH--hCCCcEEEEEe
Q 016921 267 RDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQ--SLSLEDIKAED 318 (380)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~aGf~~v~~~~ 318 (380)
....+.+.++++ ++||..+++..
T Consensus 167 -----------------------------~~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 167 -----------------------------HNQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp -----------------------------TSCHHHHHHHTGGGGGGTEECCEEE
T ss_pred -----------------------------CccHHHHHHHHHHhhcCCceEEEEE
Confidence 123567888888 89998776543
No 136
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.61 E-value=3.5e-15 Score=140.84 Aligned_cols=104 Identities=25% Similarity=0.232 Sum_probs=91.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc-
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG- 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l- 236 (380)
++.+|||||||+|.++..+++....+|+|+|+| .+++.|++++...++.++++++++|++++++++++||+|++..+.
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 378999999999999999998733499999999 599999999999998888999999999998888999999986654
Q ss_pred --CCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 237 --EHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 237 --~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
.+..+...+++++.++|||||.++..
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 34478899999999999999998743
No 137
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.61 E-value=3.5e-15 Score=134.65 Aligned_cols=125 Identities=19% Similarity=0.264 Sum_probs=104.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...++. +.+..+|+.+. +++++||+|+++...+
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-LPFGPFDLLVANLYAE 195 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-GGGCCEEEEEEECCHH
T ss_pred CCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-CcCCCCCEEEECCcHH
Confidence 3789999999999999998886 669999999999999999999887764 89999998763 4467899999865443
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~ 317 (380)
....+++++.++|||||++++..+.. ...+++.++++++||++++..
T Consensus 196 ---~~~~~l~~~~~~LkpgG~lils~~~~------------------------------~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 196 ---LHAALAPRYREALVPGGRALLTGILK------------------------------DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp ---HHHHHHHHHHHHEEEEEEEEEEEEEG------------------------------GGHHHHHHHHHHTTCEEEEEE
T ss_pred ---HHHHHHHHHHHHcCCCCEEEEEeecc------------------------------CCHHHHHHHHHHCCCEEEEEe
Confidence 34689999999999999999986421 135788999999999998876
Q ss_pred ec
Q 016921 318 DW 319 (380)
Q Consensus 318 ~~ 319 (380)
..
T Consensus 243 ~~ 244 (254)
T 2nxc_A 243 AE 244 (254)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 138
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.60 E-value=5.3e-15 Score=149.23 Aligned_cols=105 Identities=22% Similarity=0.296 Sum_probs=92.6
Q ss_pred CCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHc------CCCCCeEEEEcCCCCCCCCCCCccEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAAR------GLADKVSFQVGDALQQPFPDGQFDLV 230 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~--~~v~giD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~~~~~~fD~V 230 (380)
+.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|++++... ++ .++.|+++|+.++++++++||+|
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCcccCCeeEE
Confidence 88999999999999999998742 79999999999999999877543 33 47999999999999888999999
Q ss_pred EeccccCCCCCHH--HHHHHHHHhcCCCcEEEEEecc
Q 016921 231 WSMESGEHMPDKS--KFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 231 ~~~~~l~~~~~~~--~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
++..+++|++++. .+++++.++|||| .+++.+..
T Consensus 801 V~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 801 TCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 9999999998765 5999999999999 87777643
No 139
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.60 E-value=8.4e-15 Score=133.82 Aligned_cols=136 Identities=20% Similarity=0.258 Sum_probs=110.9
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
..++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|++++...++..++.+..+|+.+.
T Consensus 102 ~~i~~~~~~~~-----~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 102 SFIAMMLDVKE-----GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred HHHHHHhCCCC-----CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 34555555544 8899999999999999999984 5799999999999999999998888766899999999876
Q ss_pred CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHH
Q 016921 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTA 300 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (380)
+++++||+|++ +.+++..+++++.++|+|||.+++..... . ...
T Consensus 177 -~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~---------------~---------------~~~ 220 (277)
T 1o54_A 177 -FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTT---------------N---------------QVQ 220 (277)
T ss_dssp -CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSH---------------H---------------HHH
T ss_pred -ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCH---------------H---------------HHH
Confidence 56678999998 45677889999999999999999987310 0 134
Q ss_pred HHHHHHHhCCCcEEEEEec
Q 016921 301 DYVKLLQSLSLEDIKAEDW 319 (380)
Q Consensus 301 ~~~~ll~~aGf~~v~~~~~ 319 (380)
++.+.|+++||..++....
T Consensus 221 ~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 221 ETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp HHHHHHHHSSEEEEEEECC
T ss_pred HHHHHHHHCCCceeEEEEE
Confidence 5667888899998876543
No 140
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.60 E-value=5.1e-15 Score=141.13 Aligned_cols=103 Identities=26% Similarity=0.306 Sum_probs=91.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+++. +. +|+|+|+| .|++.|+++++..++.++++++++|+++++++ ++||+|++..+.
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG 139 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB
T ss_pred CCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh
Confidence 4899999999999999999987 55 99999999 99999999999999888899999999998876 899999996655
Q ss_pred CCC---CCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 237 EHM---PDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 237 ~~~---~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+++ .+...+++++.++|||||.+++..
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 554 467889999999999999998755
No 141
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.60 E-value=1.6e-16 Score=142.11 Aligned_cols=140 Identities=25% Similarity=0.290 Sum_probs=112.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++..++.++++|+.+++ ++++||+|++...+++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSS
T ss_pred CCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCC
Confidence 789999999999999999987 79999999999999999999998887668999999998876 5689999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHh--hccCCCCCCCHHHHHHHHHhCCCcEEEE
Q 016921 239 MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC--DAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (380)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 316 (380)
..+....+.+++++|+|||.+++... .... .....+.....+++..++...|...+..
T Consensus 157 ~~~~~~~~~~~~~~L~pgG~~i~~~~--------------------~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~ 216 (241)
T 3gdh_A 157 PDYATAETFDIRTMMSPDGFEIFRLS--------------------KKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQ 216 (241)
T ss_dssp GGGGGSSSBCTTTSCSSCHHHHHHHH--------------------HHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEE
T ss_pred cchhhhHHHHHHhhcCCcceeHHHHH--------------------HhhCCceEEECCCCCCHHHHHHHhccCCCEEEEe
Confidence 87777678889999999999655321 1111 1112233457788888888888766655
Q ss_pred EecC
Q 016921 317 EDWS 320 (380)
Q Consensus 317 ~~~~ 320 (380)
....
T Consensus 217 ~~~~ 220 (241)
T 3gdh_A 217 NFLN 220 (241)
T ss_dssp EEET
T ss_pred hhhc
Confidence 4433
No 142
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.59 E-value=3.9e-15 Score=131.42 Aligned_cols=105 Identities=18% Similarity=0.261 Sum_probs=89.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CC----CCCccEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FP----DGQFDLV 230 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~----~~~fD~V 230 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+. + +. .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 7899999999999999999864 6899999999999999999999888877899999998552 2 22 2689999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
++....++..+...++..+ ++|||||.|++.+.
T Consensus 139 ~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 139 FLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEcCCcccchHHHHHHHhc-cccCCCeEEEEeCC
Confidence 9988777766666777777 99999999998664
No 143
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.59 E-value=7.1e-15 Score=129.71 Aligned_cols=122 Identities=13% Similarity=0.188 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEE
Q 016921 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLA-DKVSFQ 213 (380)
Q Consensus 137 ~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~-~~v~~~ 213 (380)
....++..++...+.+ ++.+|||||||+|..+..+++.. +.+|+++|+++.+++.|+++++..++. ++++++
T Consensus 40 ~~~~~l~~l~~~~~~~-----~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 40 MTGQLLTTLAATTNGN-----GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFL 114 (221)
T ss_dssp HHHHHHHHHHHHSCCT-----TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHhhCCC-----CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEE
Confidence 3345566666554422 25599999999999999999976 689999999999999999999999987 789999
Q ss_pred EcCCCCC--CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 016921 214 VGDALQQ--PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (380)
Q Consensus 214 ~~d~~~~--~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 266 (380)
++|+.+. .+++++||+|++... ..+...+++++.++|||||.+++.+...
T Consensus 115 ~gda~~~l~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 115 LSRPLDVMSRLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp CSCHHHHGGGSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred EcCHHHHHHHhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 9998764 234689999998653 3466789999999999999999966443
No 144
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.59 E-value=1.8e-15 Score=131.64 Aligned_cols=106 Identities=15% Similarity=0.063 Sum_probs=89.0
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCCC--CCCCC-ccEEEecc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQP--FPDGQ-FDLVWSME 234 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~--~~~~~-fD~V~~~~ 234 (380)
+.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++...++. ++++++++|+.+.. +++++ ||+|++..
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 7899999999999999877764469999999999999999999888874 58999999987743 23578 99999987
Q ss_pred ccCCCCCHHHHHHHH--HHhcCCCcEEEEEecc
Q 016921 235 SGEHMPDKSKFVSEL--ARVTAPAGTIIIVTWC 265 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~--~r~LkpgG~l~~~~~~ 265 (380)
.+ +..+...+++.+ .++|||||.+++....
T Consensus 134 ~~-~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 134 PF-HFNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp CS-SSCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CC-CCccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 74 456778889998 6689999999987643
No 145
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.59 E-value=1.2e-14 Score=127.23 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=80.8
Q ss_pred CCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC----CCCCCCccEEE
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ----PFPDGQFDLVW 231 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~fD~V~ 231 (380)
.++.+|||||||+|.++..+++.. +.+|+|+|+|+.|++.+.+.+... .++.++++|+... +++ ++||+|+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~-~~fD~V~ 131 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIV-EKVDLIY 131 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTC-CCEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccc-cceeEEE
Confidence 358899999999999999999876 379999999999887776666543 4789999998773 444 7899999
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+.. ..+ .+...++++++++|||||++++..
T Consensus 132 ~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 132 QDI-AQK-NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ECC-CST-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eec-cCh-hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 872 222 234456899999999999999974
No 146
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.59 E-value=1.1e-14 Score=127.99 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=105.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...++.+++.+.++|..+...++++||+|++.++.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 47899999999999999999974 45899999999999999999999999889999999998865444579998876544
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEE
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 316 (380)
. .-...++....+.|+++|+|++.-. ...+.++++|.+.||.+++.
T Consensus 101 g--~lI~~IL~~~~~~l~~~~~lIlqp~--------------------------------~~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 101 G--RLIADILNNDIDKLQHVKTLVLQPN--------------------------------NREDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp H--HHHHHHHHHTGGGGTTCCEEEEEES--------------------------------SCHHHHHHHHHHTTEEEEEE
T ss_pred h--HHHHHHHHHHHHHhCcCCEEEEECC--------------------------------CChHHHHHHHHHCCCEEEEE
Confidence 3 1246788888999999999999752 13578999999999998886
Q ss_pred E
Q 016921 317 E 317 (380)
Q Consensus 317 ~ 317 (380)
.
T Consensus 147 ~ 147 (230)
T 3lec_A 147 D 147 (230)
T ss_dssp E
T ss_pred E
Confidence 5
No 147
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=3e-14 Score=128.00 Aligned_cols=105 Identities=21% Similarity=0.288 Sum_probs=90.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCC--CCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFP--DGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~--~~~fD~V~~~ 233 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+. +.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 7899999999999999999976 5799999999999999999999999888999999998763 322 3589999986
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 016921 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (380)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 266 (380)
.. ..+...+++++.++|||||+|++.+...
T Consensus 144 ~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 144 AD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp SC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred Cc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 53 4566789999999999999999977543
No 148
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.58 E-value=6.2e-15 Score=131.31 Aligned_cols=105 Identities=21% Similarity=0.366 Sum_probs=85.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH------cCCCCCeEEEEcCCCC-CC--CCCCCc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA------RGLADKVSFQVGDALQ-QP--FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~-~~--~~~~~f 227 (380)
++.+|||||||+|.++..+++.. +..|+|+|+|+.|++.|++++.. .+. .++.++++|+.+ ++ +++++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcCe
Confidence 36789999999999999999886 67999999999999999988754 233 589999999987 55 778999
Q ss_pred cEEEeccccCCCCC--------HHHHHHHHHHhcCCCcEEEEEe
Q 016921 228 DLVWSMESGEHMPD--------KSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 228 D~V~~~~~l~~~~~--------~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
|.|++.+.-.+... ...+++++.++|||||.|++..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 99987554333211 1479999999999999999875
No 149
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.58 E-value=1.4e-14 Score=134.92 Aligned_cols=112 Identities=14% Similarity=0.246 Sum_probs=95.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
++..++..+.+.+ +.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|++++...++. ++.++++|+.
T Consensus 63 ~~~~l~~~l~~~~-----~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~ 136 (317)
T 1dl5_A 63 LMALFMEWVGLDK-----GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGY 136 (317)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGG
T ss_pred HHHHHHHhcCCCC-----cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChh
Confidence 4556666666554 8999999999999999999875 256999999999999999999888875 5999999998
Q ss_pred CCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 219 QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+.+.++++||+|++..+++|+. +++.++|||||++++...
T Consensus 137 ~~~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 137 YGVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GCCGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred hccccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 8654568899999999999987 578899999999999864
No 150
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.58 E-value=8.2e-15 Score=137.70 Aligned_cols=160 Identities=14% Similarity=0.122 Sum_probs=89.9
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcC----------CCCCe
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARG----------LADKV 210 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~giD~s~~~~~~a~~~~~~~~----------~~~~v 210 (380)
..++..+.+.+ +.+|||+|||+|.++..+++..+ .+|+++|+++.+++.|++++...+ ...++
T Consensus 95 ~~~l~~l~~~~-----g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v 169 (336)
T 2b25_A 95 NMILSMMDINP-----GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV 169 (336)
T ss_dssp HHHHHHHTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE
T ss_pred HHHHHhcCCCC-----CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCce
Confidence 34444455543 88999999999999999999753 799999999999999999987532 33589
Q ss_pred EEEEcCCCCC--CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHh
Q 016921 211 SFQVGDALQQ--PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKIC 288 (380)
Q Consensus 211 ~~~~~d~~~~--~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (380)
+++++|+.+. ++++++||+|++.. +++..+++++.++|||||.+++.... ...+.... ..+....
T Consensus 170 ~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~-------~~~~~~~~-~~l~~~~ 236 (336)
T 2b25_A 170 DFIHKDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVN-------ITQVIELL-DGIRTCE 236 (336)
T ss_dssp EEEESCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESS-------HHHHHHHH-HHHHHHT
T ss_pred EEEECChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCC-------HHHHHHHH-HHHHhcC
Confidence 9999999886 45667899999843 34455899999999999999987632 11111111 1111110
Q ss_pred h--------ccCCCCC------CCHHHHHHHHHhCCCcEEEEEecC
Q 016921 289 D--------AYYLPAW------CSTADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 289 ~--------~~~~~~~------~~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
. ......| ....++...|+++||+++++.+..
T Consensus 237 ~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~~ 282 (336)
T 2b25_A 237 LALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQE 282 (336)
T ss_dssp CCEEEEEEECCCCCCEEECC--------------------------
T ss_pred CCcccceEEEecccceEEEeecccccchhhhhcccccccccccccc
Confidence 0 0000111 111288899999999999876655
No 151
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.58 E-value=2.1e-15 Score=128.18 Aligned_cols=119 Identities=13% Similarity=0.050 Sum_probs=94.1
Q ss_pred HHHHHHHHcC-CCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 141 MIEETLRFAG-VSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~-~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
+.+.++..+. .. ++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++.+++.++.+|+.+
T Consensus 18 ~~~~~~~~l~~~~-----~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (177)
T 2esr_A 18 VRGAIFNMIGPYF-----NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER 92 (177)
T ss_dssp CHHHHHHHHCSCC-----CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHhhc-----CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHH
Confidence 4445555554 22 37899999999999999999873469999999999999999999888876789999999877
Q ss_pred C-CCCCCCccEEEeccccCCCCCHHHHHHHHH--HhcCCCcEEEEEecc
Q 016921 220 Q-PFPDGQFDLVWSMESGEHMPDKSKFVSELA--RVTAPAGTIIIVTWC 265 (380)
Q Consensus 220 ~-~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~--r~LkpgG~l~~~~~~ 265 (380)
. +..+++||+|++...++ .......++.+. ++|+|||.+++....
T Consensus 93 ~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 93 AIDCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HHHHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred hHHhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 3 33346799999876542 234567777777 999999999998754
No 152
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.58 E-value=1.1e-14 Score=136.17 Aligned_cols=102 Identities=24% Similarity=0.256 Sum_probs=89.7
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccc---
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES--- 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~--- 235 (380)
+.+|||||||+|.++..+++....+|+|+|+| .+++.|++++...++.++++++.+|+.++++++++||+|++...
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 117 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYF 117 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhh
Confidence 78999999999999999998633499999999 59999999999988888899999999998887789999998744
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEE
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIII 261 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~ 261 (380)
+.+..+...++.++.++|||||.++.
T Consensus 118 l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 118 LLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 44446688999999999999999974
No 153
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=128.99 Aligned_cols=139 Identities=12% Similarity=0.101 Sum_probs=100.4
Q ss_pred CCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC---CCCCCCCccEEE
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ---QPFPDGQFDLVW 231 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~~fD~V~ 231 (380)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+.+.+... .++.++++|+.+ +++.+++||+|+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVDVIF 152 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEEEEE
Confidence 358899999999999999999986 379999999999988888777664 579999999987 344568999999
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCC
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSL 311 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 311 (380)
+... .......++.++.++|||||++++........ ..... ... + ..+ .++|+++||
T Consensus 153 ~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~----~~~~~--~~~-------------~-~~~-~~~l~~~Gf 209 (233)
T 2ipx_A 153 ADVA--QPDQTRIVALNAHTFLRNGGHFVISIKANCID----STASA--EAV-------------F-ASE-VKKMQQENM 209 (233)
T ss_dssp ECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHC----SSSCH--HHH-------------H-HHH-HHTTGGGTE
T ss_pred EcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccc----cCCCH--HHH-------------H-HHH-HHHHHHCCC
Confidence 8544 22223556889999999999999954311000 00000 000 0 123 488899999
Q ss_pred cEEEEEecCC
Q 016921 312 EDIKAEDWSQ 321 (380)
Q Consensus 312 ~~v~~~~~~~ 321 (380)
++++...+..
T Consensus 210 ~~~~~~~~~~ 219 (233)
T 2ipx_A 210 KPQEQLTLEP 219 (233)
T ss_dssp EEEEEEECTT
T ss_pred ceEEEEecCC
Confidence 9998766543
No 154
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.58 E-value=1.6e-15 Score=128.02 Aligned_cols=102 Identities=11% Similarity=0.175 Sum_probs=88.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
+.+|||||||+|.++..++... +++|+++|+|+.|++.+++++...|...++.+ .|.... .+.++||+|++..++|
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-CCCCCcChhhHhhHHH
Confidence 7899999999999999998765 67999999999999999999998887656666 565443 3568899999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
++++.+..+.++++.|+|||.++-.+
T Consensus 127 lL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 99666778889999999999988866
No 155
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.58 E-value=3.1e-14 Score=130.35 Aligned_cols=135 Identities=13% Similarity=0.071 Sum_probs=100.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCC-EEEEEeC-CHHHHHHHHHHH-----HHcCCC----CCeEEEEcCCCCCC--C--
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGA-KCQGITL-SPVQAQRANALA-----AARGLA----DKVSFQVGDALQQP--F-- 222 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~-~v~giD~-s~~~~~~a~~~~-----~~~~~~----~~v~~~~~d~~~~~--~-- 222 (380)
++.+|||||||+|.++..+++. +. +|+|+|+ |+.+++.+++++ ...++. +++.+...|..+.. +
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 3789999999999999998886 55 9999999 899999999998 555543 47888877765531 1
Q ss_pred --CCCCccEEEeccccCCCCCHHHHHHHHHHhcC---C--CcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCC
Q 016921 223 --PDGQFDLVWSMESGEHMPDKSKFVSELARVTA---P--AGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPA 295 (380)
Q Consensus 223 --~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~Lk---p--gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (380)
++++||+|++..+++|.++...+++.+.++|+ | ||.+++....... .+
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~--------------~~----------- 212 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRP--------------HL----------- 212 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC------------------------------
T ss_pred hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeec--------------cc-----------
Confidence 35789999999999999999999999999999 9 9998775321100 00
Q ss_pred CCCHHHHHHHHHhCC-CcEEEEEe
Q 016921 296 WCSTADYVKLLQSLS-LEDIKAED 318 (380)
Q Consensus 296 ~~~~~~~~~ll~~aG-f~~v~~~~ 318 (380)
.....++.+.++++| |+++.+..
T Consensus 213 ~~~~~~~~~~l~~~G~f~v~~~~~ 236 (281)
T 3bzb_A 213 AERDLAFFRLVNADGALIAEPWLS 236 (281)
T ss_dssp ---CTHHHHHHHHSTTEEEEEEEC
T ss_pred chhHHHHHHHHHhcCCEEEEEecc
Confidence 011245667889999 99887754
No 156
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.58 E-value=1.5e-14 Score=128.38 Aligned_cols=109 Identities=15% Similarity=0.137 Sum_probs=91.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.+..++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++....+ ++.++.+|+.+.
T Consensus 58 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~ 128 (231)
T 1vbf_A 58 LGIFMLDELDLHK-----GQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLG 128 (231)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGC
T ss_pred HHHHHHHhcCCCC-----CCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccc
Confidence 4556666665543 889999999999999999997 5899999999999999999886544 799999999873
Q ss_pred CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 221 PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
..++++||+|++..+++|+.+ ++.++|||||++++...
T Consensus 129 ~~~~~~fD~v~~~~~~~~~~~------~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 129 YEEEKPYDRVVVWATAPTLLC------KPYEQLKEGGIMILPIG 166 (231)
T ss_dssp CGGGCCEEEEEESSBBSSCCH------HHHHTEEEEEEEEEEEC
T ss_pred cccCCCccEEEECCcHHHHHH------HHHHHcCCCcEEEEEEc
Confidence 324678999999999999863 68999999999999864
No 157
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.58 E-value=6.1e-15 Score=126.20 Aligned_cols=107 Identities=16% Similarity=0.019 Sum_probs=89.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEEEec
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVWSM 233 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~~ 233 (380)
++.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++...++.++++++++|+.+.. .++++||+|++.
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 3789999999999999998885347999999999999999999988887678999999987732 226789999998
Q ss_pred cccCCCCCHHHHHHHH--HHhcCCCcEEEEEecc
Q 016921 234 ESGEHMPDKSKFVSEL--ARVTAPAGTIIIVTWC 265 (380)
Q Consensus 234 ~~l~~~~~~~~~l~~~--~r~LkpgG~l~~~~~~ 265 (380)
..++ ..+....++.+ .++|+|||.+++....
T Consensus 124 ~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 124 PPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 7643 45667778887 8899999999997644
No 158
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=2.1e-14 Score=125.91 Aligned_cols=112 Identities=21% Similarity=0.303 Sum_probs=93.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
.+..++..+.+.+ +.+|||||||+|.++..+++..+ .+|+++|+++.+++.+++++...++. ++.+..+|+.
T Consensus 65 ~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~ 138 (215)
T 2yxe_A 65 MVGMMCELLDLKP-----GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGT 138 (215)
T ss_dssp HHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGG
T ss_pred HHHHHHHhhCCCC-----CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcc
Confidence 3445555555443 88999999999999999999864 79999999999999999999877764 6999999986
Q ss_pred CCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 219 QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.....+++||+|++..+++|+. +++.++|||||++++...
T Consensus 139 ~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 139 LGYEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp GCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred cCCCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEEC
Confidence 5322357899999999999986 488999999999999864
No 159
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.57 E-value=5.5e-15 Score=128.62 Aligned_cols=104 Identities=12% Similarity=0.027 Sum_probs=88.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCCCCCccEEEeccccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V~~~~~l~ 237 (380)
+.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++...++ .+++++++|+.+ ++..+++||+|++... +
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p-~ 132 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPP-F 132 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCS-S
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCC-C
Confidence 789999999999999988776445999999999999999999988887 689999999877 4555678999998766 3
Q ss_pred CCCCHHHHHHHHHH--hcCCCcEEEEEec
Q 016921 238 HMPDKSKFVSELAR--VTAPAGTIIIVTW 264 (380)
Q Consensus 238 ~~~~~~~~l~~~~r--~LkpgG~l~~~~~ 264 (380)
+..+...+++.+.+ +|+|||.+++...
T Consensus 133 ~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 133 RRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp STTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 45677888888876 5999999998764
No 160
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.57 E-value=1.7e-14 Score=138.61 Aligned_cols=119 Identities=15% Similarity=0.189 Sum_probs=95.9
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHH-------HHHHHHcCCC-CCe
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRA-------NALAAARGLA-DKV 210 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~giD~s~~~~~~a-------~~~~~~~~~~-~~v 210 (380)
..+..++..+.+.. +.+|||||||+|.++..+++..+ .+|+|+|+++.+++.| ++++...|+. .++
T Consensus 229 ~~v~~ml~~l~l~~-----g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV 303 (433)
T 1u2z_A 229 NFLSDVYQQCQLKK-----GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNV 303 (433)
T ss_dssp HHHHHHHHHTTCCT-----TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred HHHHHHHHhcCCCC-----CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCce
Confidence 35566777766554 89999999999999999999764 5899999999999988 8888877753 689
Q ss_pred EEEEcCCCCC--CC--CCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 211 SFQVGDALQQ--PF--PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 211 ~~~~~d~~~~--~~--~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+++++|.... ++ ..++||+|++...+ +.++...+++++.++|||||+|++.+.
T Consensus 304 ~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 304 EFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp EEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred EEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 9999865432 12 24789999987666 447788899999999999999999863
No 161
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.57 E-value=2.2e-14 Score=131.04 Aligned_cols=113 Identities=16% Similarity=0.238 Sum_probs=96.3
Q ss_pred HHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc-C-CCCCeEEEEcCC
Q 016921 142 IEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAAR-G-LADKVSFQVGDA 217 (380)
Q Consensus 142 ~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~-~-~~~~v~~~~~d~ 217 (380)
+..++..+.+.+ +.+|||+|||+|.++..+++.. +.+|+++|+++.+++.|++++... + +..++.++++|+
T Consensus 88 ~~~i~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 88 AAQIVHEGDIFP-----GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred HHHHHHHcCCCC-----CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 345556665554 8899999999999999999864 579999999999999999998876 4 456899999999
Q ss_pred CCCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 218 LQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 218 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.+.++++++||+|++ +++++..+++++.++|+|||++++...
T Consensus 163 ~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 163 ADSELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp GGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred HhcCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 988777889999998 456777899999999999999999873
No 162
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.57 E-value=1.7e-14 Score=136.18 Aligned_cols=103 Identities=25% Similarity=0.328 Sum_probs=90.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++..++.++++++.+|+++++++ ++||+|++..+++
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBT
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchh
Confidence 3889999999999999999986345999999996 8899999999888878999999999998765 6899999998888
Q ss_pred CCC--CHHHHHHHHHHhcCCCcEEEEE
Q 016921 238 HMP--DKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 238 ~~~--~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
|+. +....+.++.++|||||.+++.
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 874 4567888999999999999864
No 163
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.57 E-value=2.2e-14 Score=127.58 Aligned_cols=105 Identities=22% Similarity=0.255 Sum_probs=91.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CCCCCccEEEeccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FPDGQFDLVWSMES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~~fD~V~~~~~ 235 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+. + ..+++||+|++...
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 7899999999999999999955 7899999999999999999999998877999999999775 3 23689999997643
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 266 (380)
..+...+++++.++|||||+|++.+...
T Consensus 152 ---~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 152 ---KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp ---SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred ---HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 4567889999999999999998866443
No 164
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.57 E-value=5.7e-15 Score=134.06 Aligned_cols=104 Identities=17% Similarity=0.240 Sum_probs=85.0
Q ss_pred CCEEEEECCCcCh----HHHHHHHHcC-----CEEEEEeCCHHHHHHHHHHHHH-----------------------cC-
Q 016921 159 PKNVVDVGCGIGG----SSRYLAKKFG-----AKCQGITLSPVQAQRANALAAA-----------------------RG- 205 (380)
Q Consensus 159 ~~~vLDiGcGtG~----~~~~l~~~~~-----~~v~giD~s~~~~~~a~~~~~~-----------------------~~- 205 (380)
+.+|||+|||||. ++..+++..+ .+|+|+|+|+.|++.|++.... .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 6799999999998 5666666532 5899999999999999986310 00
Q ss_pred ------CCCCeEEEEcCCCCCCCC-CCCccEEEeccccCCCCCH--HHHHHHHHHhcCCCcEEEEE
Q 016921 206 ------LADKVSFQVGDALQQPFP-DGQFDLVWSMESGEHMPDK--SKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 206 ------~~~~v~~~~~d~~~~~~~-~~~fD~V~~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~ 262 (380)
+..+|.|.++|+.+.+++ .++||+|+|.+++.|+++. .+++++++++|+|||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013699999999886665 5789999999999999665 78999999999999999984
No 165
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.56 E-value=1.4e-14 Score=131.84 Aligned_cols=152 Identities=11% Similarity=0.080 Sum_probs=102.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEE-EEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSF-QVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~ 219 (380)
.+..++..+.+.. ++.+|||||||||.++..+++....+|+|+|+|+.|++.+.+.. +++.. ...|+..
T Consensus 72 Kl~~~l~~~~~~~----~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~ 141 (291)
T 3hp7_A 72 KLEKALAVFNLSV----EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRY 141 (291)
T ss_dssp HHHHHHHHTTCCC----TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGG
T ss_pred HHHHHHHhcCCCc----cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCcee
Confidence 4556677666542 47899999999999999998873459999999999998754321 23432 2344444
Q ss_pred CC---CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCC-C-
Q 016921 220 QP---FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYL-P- 294 (380)
Q Consensus 220 ~~---~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 294 (380)
++ ++..+||+|++..+++++ ..++.+++++|||||.+++.. .+.+......+. ..+. .
T Consensus 142 l~~~~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lv--kPqfe~~~~~~~------------~~G~vrd 204 (291)
T 3hp7_A 142 AEPVDFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVALV--KPQFEAGREQIG------------KNGIVRE 204 (291)
T ss_dssp CCGGGCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--CGGGTSCGGGCC-------------CCCCCC
T ss_pred cchhhCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEE--CcccccChhhcC------------CCCccCC
Confidence 32 344569999998777654 789999999999999999973 111111110000 0000 0
Q ss_pred ---CCCCHHHHHHHHHhCCCcEEEEEec
Q 016921 295 ---AWCSTADYVKLLQSLSLEDIKAEDW 319 (380)
Q Consensus 295 ---~~~~~~~~~~ll~~aGf~~v~~~~~ 319 (380)
+....+++.++++++||.+..+...
T Consensus 205 ~~~~~~~~~~v~~~~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 205 SSIHEKVLETVTAFAVDYGFSVKGLDFS 232 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEC
Confidence 0135688999999999998877654
No 166
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.56 E-value=3.8e-14 Score=125.04 Aligned_cols=104 Identities=20% Similarity=0.299 Sum_probs=89.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CC---CCCccEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FP---DGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~---~~~fD~V~ 231 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+. + ++ .++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 7899999999999999999976 5799999999999999999999989887899999998653 1 11 26799999
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
+... ..+...+++++.++|||||.+++.+..
T Consensus 139 ~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 139 IDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp ECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 8654 345678999999999999999887654
No 167
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.56 E-value=2.4e-14 Score=125.64 Aligned_cols=125 Identities=16% Similarity=0.111 Sum_probs=103.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCC-CccEEEeccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDG-QFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~fD~V~~~~~ 235 (380)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...++.+++++..+|..+. ++.+ +||+|++.++
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~-l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA-FEETDQVSVITIAGM 93 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-CCGGGCCCEEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh-cccCcCCCEEEEcCC
Confidence 47899999999999999999975 4589999999999999999999999988899999998642 2333 7999987654
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEE
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 315 (380)
-. .-...++..+.+.|+++|++++.-. ...+.++++|++.||.+++
T Consensus 94 Gg--~~i~~Il~~~~~~L~~~~~lVlq~~--------------------------------~~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 94 GG--RLIARILEEGLGKLANVERLILQPN--------------------------------NREDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp CH--HHHHHHHHHTGGGCTTCCEEEEEES--------------------------------SCHHHHHHHHHHTTEEEEE
T ss_pred Ch--HHHHHHHHHHHHHhCCCCEEEEECC--------------------------------CCHHHHHHHHHHCCCEEEE
Confidence 32 1246789999999999999998642 1357889999999999887
Q ss_pred EE
Q 016921 316 AE 317 (380)
Q Consensus 316 ~~ 317 (380)
..
T Consensus 140 e~ 141 (225)
T 3kr9_A 140 ES 141 (225)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 168
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.56 E-value=2.1e-14 Score=127.26 Aligned_cols=126 Identities=12% Similarity=0.065 Sum_probs=104.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...++.+++.+.++|..+...++++||+|++.++.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 47899999999999999999874 35899999999999999999999999888999999988755443469999875543
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEE
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKA 316 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~ 316 (380)
. .-...++.+..+.|+++|+|++.-. ...+.++++|.+.||.+++.
T Consensus 101 g--~lI~~IL~~~~~~L~~~~~lIlq~~--------------------------------~~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 101 G--TLIRTILEEGAAKLAGVTKLILQPN--------------------------------IAAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp H--HHHHHHHHHTGGGGTTCCEEEEEES--------------------------------SCHHHHHHHHHHHTEEEEEE
T ss_pred h--HHHHHHHHHHHHHhCCCCEEEEEcC--------------------------------CChHHHHHHHHHCCCEEEEE
Confidence 2 1246788899999999999999752 13578899999999998765
Q ss_pred E
Q 016921 317 E 317 (380)
Q Consensus 317 ~ 317 (380)
.
T Consensus 147 ~ 147 (244)
T 3gnl_A 147 A 147 (244)
T ss_dssp E
T ss_pred E
Confidence 4
No 169
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.56 E-value=6.2e-15 Score=147.96 Aligned_cols=105 Identities=29% Similarity=0.352 Sum_probs=91.0
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCCccEEEecccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMESG 236 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~~~~l 236 (380)
+.+|||||||+|.++..||+. |+.|+|||+++.+++.|+.++.+.+. .+++|.+++++++ .+++++||+|+|..++
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 789999999999999999997 99999999999999999999987764 2699999999887 4567899999999999
Q ss_pred CCCCCHHH--HHHHHHHhcCCCcEEEEEecc
Q 016921 237 EHMPDKSK--FVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 237 ~~~~~~~~--~l~~~~r~LkpgG~l~~~~~~ 265 (380)
+|++|+.. .+..+.+.|+++|..++..+.
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 99988753 345678888999887776654
No 170
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.55 E-value=1.6e-13 Score=121.25 Aligned_cols=138 Identities=14% Similarity=0.162 Sum_probs=96.4
Q ss_pred CCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCCccEEE
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVW 231 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~ 231 (380)
.++.+|||+|||+|.++..+++.. ..+|+|+|+++.|++...+.+... .++.++++|+.... ...++||+|+
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceEEEE
Confidence 469999999999999999999875 469999999999976555544443 47999999998642 1246899999
Q ss_pred eccccCCCCCHHHHH-HHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC
Q 016921 232 SMESGEHMPDKSKFV-SELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS 310 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l-~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 310 (380)
+.... ++....+ ..+.+.|||||+|++..-... ... ....--..++..+.|+++|
T Consensus 152 ~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~----------------~d~-----t~~~~e~~~~~~~~L~~~g 207 (232)
T 3id6_C 152 VDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARS----------------IDV-----TKDPKEIYKTEVEKLENSN 207 (232)
T ss_dssp ECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC----------------------------CCSSSSTTHHHHHHHHTT
T ss_pred ecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCC----------------ccc-----CCCHHHHHHHHHHHHHHCC
Confidence 87543 4555544 566669999999999742110 000 0000011244567888999
Q ss_pred CcEEEEEecCC
Q 016921 311 LEDIKAEDWSQ 321 (380)
Q Consensus 311 f~~v~~~~~~~ 321 (380)
|++++...+..
T Consensus 208 f~~~~~~~l~p 218 (232)
T 3id6_C 208 FETIQIINLDP 218 (232)
T ss_dssp EEEEEEEECTT
T ss_pred CEEEEEeccCC
Confidence 99998876643
No 171
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.54 E-value=1.6e-14 Score=129.32 Aligned_cols=107 Identities=16% Similarity=0.210 Sum_probs=91.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CC-----CCCccEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FP-----DGQFDLV 230 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~-----~~~fD~V 230 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+.. .. +++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 7799999999999999999865 57999999999999999999999998889999999987642 11 4789999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCC
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRD 268 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~ 268 (380)
++... ..+...+++++.++|||||.|++.+.....
T Consensus 141 ~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 141 FIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 98654 346778999999999999999998765443
No 172
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.54 E-value=2.9e-14 Score=124.64 Aligned_cols=103 Identities=23% Similarity=0.326 Sum_probs=88.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCCccEEEeccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V~~~~~ 235 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+. +..++ ||+|++...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 6799999999999999999875 5799999999999999999998888767899999998764 43346 999998732
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
..+...+++++.++|||||.+++.+..
T Consensus 136 ---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 136 ---VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp ---TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred ---hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 457789999999999999999986643
No 173
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.54 E-value=1.3e-14 Score=134.30 Aligned_cols=137 Identities=16% Similarity=0.231 Sum_probs=102.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH---cCCCCCeEEEEcCCCCCCC--CCCCccEEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA---RGLADKVSFQVGDALQQPF--PDGQFDLVW 231 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~~--~~~~fD~V~ 231 (380)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.+++++.. ....++++++.+|+.+.+. ++++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 37899999999999999999865 57999999999999999998742 1223589999999877542 468999999
Q ss_pred eccccCCCCCH----HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 016921 232 SMESGEHMPDK----SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQ 307 (380)
Q Consensus 232 ~~~~l~~~~~~----~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 307 (380)
+.....+.+.. .++++++.++|||||++++..... . .. .....++.+.|+
T Consensus 175 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~-----~---~~------------------~~~~~~~~~~l~ 228 (304)
T 3bwc_A 175 IDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI-----W---LD------------------LELIEKMSRFIR 228 (304)
T ss_dssp EECC---------CCHHHHHHHHHHEEEEEEEEEEECCT-----T---TC------------------HHHHHHHHHHHH
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc-----c---cc------------------hHHHHHHHHHHH
Confidence 97655443322 589999999999999999975211 0 00 012467888999
Q ss_pred hCCCcEEEEEecC
Q 016921 308 SLSLEDIKAEDWS 320 (380)
Q Consensus 308 ~aGf~~v~~~~~~ 320 (380)
++||..+......
T Consensus 229 ~~GF~~v~~~~~~ 241 (304)
T 3bwc_A 229 ETGFASVQYALMH 241 (304)
T ss_dssp HHTCSEEEEEECC
T ss_pred hCCCCcEEEEEee
Confidence 9999988776543
No 174
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.54 E-value=1.5e-13 Score=123.09 Aligned_cols=110 Identities=13% Similarity=0.141 Sum_probs=94.7
Q ss_pred HHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC
Q 016921 143 EETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF 222 (380)
Q Consensus 143 ~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 222 (380)
..++..+.+.+ +.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++....++..++.+..+|+.+...
T Consensus 81 ~~~~~~~~~~~-----~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 154 (248)
T 2yvl_A 81 FYIALKLNLNK-----EKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV 154 (248)
T ss_dssp HHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC
T ss_pred HHHHHhcCCCC-----CCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc
Confidence 34455555544 889999999999999999998 889999999999999999999888876789999999988543
Q ss_pred CCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 223 PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 223 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
++++||+|++ +.+++..+++++.++|+|||.+++..
T Consensus 155 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 155 PEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp CTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred CCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 5678999997 45677789999999999999999987
No 175
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.54 E-value=5.5e-14 Score=124.94 Aligned_cols=104 Identities=22% Similarity=0.314 Sum_probs=91.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCC--CCCccEEEecc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFP--DGQFDLVWSME 234 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~--~~~fD~V~~~~ 234 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++..++.++.+|+.+. +.. +++||+|++..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 7899999999999999999987 6899999999999999999999888877899999999874 322 57899999876
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
.. .+...+++++.++|+|||.+++.++.
T Consensus 135 ~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 135 AK---GQYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp GG---SCHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CH---HHHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 64 37789999999999999999997653
No 176
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.54 E-value=5.2e-14 Score=133.82 Aligned_cols=104 Identities=20% Similarity=0.220 Sum_probs=88.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCC--CeEEEEcCCCCCCCCCCCccEEEeccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLAD--KVSFQVGDALQQPFPDGQFDLVWSMES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~--~v~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (380)
+.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+++++...++.. +++|+.+|+.+ ++++++||+|+++..
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPP 301 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCC
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCC
Confidence 6899999999999999999987 7899999999999999999998877643 58889999987 556789999999988
Q ss_pred cCCCCC-----HHHHHHHHHHhcCCCcEEEEEe
Q 016921 236 GEHMPD-----KSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 236 l~~~~~-----~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+++... ...+++++.++|||||.+++..
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 875321 2478999999999999999976
No 177
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=3.5e-14 Score=128.50 Aligned_cols=106 Identities=16% Similarity=0.235 Sum_probs=89.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH---cCCCCCeEEEEcCCCCC-------CCCCCC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA---RGLADKVSFQVGDALQQ-------PFPDGQ 226 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~-------~~~~~~ 226 (380)
++.+|||+|||+|.++..++++. +.+|+|+|+++.+++.|++++.. .++.+++.++++|+.+. ++++++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 47899999999999999999987 57999999999999999999887 77766899999999887 256789
Q ss_pred ccEEEeccccCC----------------C--CCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 227 FDLVWSMESGEH----------------M--PDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 227 fD~V~~~~~l~~----------------~--~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
||+|+++-.+.. . .+...+++.+.++|||||++++..
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999732211 1 236789999999999999999864
No 178
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.53 E-value=9.2e-14 Score=122.82 Aligned_cols=101 Identities=20% Similarity=0.266 Sum_probs=86.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCCCCCCCCccEEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFG--AKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQPFPDGQFDLVW 231 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~--~~v~giD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~fD~V~ 231 (380)
++.+|||||||+|..+..+++..+ .+|+++|+++.+++.+++++...+. ..++.++++|+...+.++++||+|+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 488999999999999999998753 6999999999999999999877553 3579999999987655567899999
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+...++++. +++.++|||||++++...
T Consensus 157 ~~~~~~~~~------~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 157 VGAAAPVVP------QALIDQLKPGGRLILPVG 183 (226)
T ss_dssp ECSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred ECCchHHHH------HHHHHhcCCCcEEEEEEe
Confidence 998887764 588999999999999764
No 179
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.53 E-value=1.3e-13 Score=121.88 Aligned_cols=137 Identities=17% Similarity=0.191 Sum_probs=99.6
Q ss_pred CCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCCccEEE
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVW 231 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~ 231 (380)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+++++... .++.++++|+.+.. ...++||+|+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceEEE
Confidence 358899999999999999999875 379999999999999998877543 58999999998732 1236899999
Q ss_pred eccccCCCCCH-HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC
Q 016921 232 SMESGEHMPDK-SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS 310 (380)
Q Consensus 232 ~~~~l~~~~~~-~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 310 (380)
+... .++. ..+++++.++|||||.+++. +........ .... . ...+++.++ +++
T Consensus 149 ~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~---~~~~--~--------------~~~~~l~~l-~~~- 203 (227)
T 1g8a_A 149 EDVA---QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVT---KEPE--Q--------------VFREVEREL-SEY- 203 (227)
T ss_dssp ECCC---STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTT---SCHH--H--------------HHHHHHHHH-HTT-
T ss_pred ECCC---CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCC---CChh--h--------------hhHHHHHHH-Hhh-
Confidence 7654 2343 34599999999999999997 322111100 0000 0 124566666 777
Q ss_pred CcEEEEEecCC
Q 016921 311 LEDIKAEDWSQ 321 (380)
Q Consensus 311 f~~v~~~~~~~ 321 (380)
|++++..++..
T Consensus 204 f~~~~~~~~~~ 214 (227)
T 1g8a_A 204 FEVIERLNLEP 214 (227)
T ss_dssp SEEEEEEECTT
T ss_pred ceeeeEeccCc
Confidence 99998877643
No 180
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.52 E-value=6.1e-14 Score=124.86 Aligned_cols=111 Identities=21% Similarity=0.341 Sum_probs=91.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
++..++..+.+.+ +.+|||||||+|.++..+++..+.+|+++|+++.+++.|++++...++. ++.+..+|+ ..
T Consensus 79 ~~~~~~~~l~~~~-----~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~-~~ 151 (235)
T 1jg1_A 79 MVAIMLEIANLKP-----GMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDG-SK 151 (235)
T ss_dssp HHHHHHHHHTCCT-----TCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCG-GG
T ss_pred HHHHHHHhcCCCC-----CCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCc-cc
Confidence 4445555555543 8899999999999999999975589999999999999999999888774 599999997 33
Q ss_pred CCCC-CCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 221 PFPD-GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 221 ~~~~-~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
++++ .+||+|++..+++++.+ ++.+.|||||++++...
T Consensus 152 ~~~~~~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 152 GFPPKAPYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CCGGGCCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEEC
T ss_pred CCCCCCCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEe
Confidence 4444 35999999999988863 78999999999999764
No 181
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.52 E-value=3.9e-14 Score=125.06 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=89.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CC----CCCccEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-FP----DGQFDLV 230 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~----~~~fD~V 230 (380)
+.+|||||||+|..+..+++.+ +.+|+++|+++.+++.|++++...++.++++++++|+.+. + +. .++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 7799999999999999999875 5799999999999999999999999877899999998653 1 11 1789999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 266 (380)
++... ..+...+++++.++|||||+|++.+...
T Consensus 145 ~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 145 YIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred EECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 96543 3467889999999999999999987543
No 182
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.52 E-value=1e-13 Score=128.83 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=101.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEec--
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM-- 233 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~-- 233 (380)
++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.+++++...++. ++.++++|+.+++..+++||+|++.
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccCCEEEEeCC
Confidence 48899999999999999999876 479999999999999999999888874 7999999998876445789999983
Q ss_pred ----cccCCCCCH----------------HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCC
Q 016921 234 ----ESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYL 293 (380)
Q Consensus 234 ----~~l~~~~~~----------------~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (380)
.++.+.++. ..+++++.++|||||++++++......
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~------------------------ 252 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE------------------------ 252 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG------------------------
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH------------------------
Confidence 233332221 478999999999999999977421110
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEE
Q 016921 294 PAWCSTADYVKLLQSLSLEDIKA 316 (380)
Q Consensus 294 ~~~~~~~~~~~ll~~aGf~~v~~ 316 (380)
-..+.+..++++.||+.+.+
T Consensus 253 ---Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 253 ---ENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp ---GTHHHHHHHHHHSSEEEECC
T ss_pred ---HhHHHHHHHHhcCCCEEecC
Confidence 12345667788889887754
No 183
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.52 E-value=2.1e-14 Score=129.06 Aligned_cols=120 Identities=15% Similarity=0.130 Sum_probs=90.7
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHH--c-CCEEEEEeCCHHHHHHHHHHHHHc---CCCCC----
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKK--F-GAKCQGITLSPVQAQRANALAAAR---GLADK---- 209 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~--~-~~~v~giD~s~~~~~~a~~~~~~~---~~~~~---- 209 (380)
.++..++..+... ++.+|||+|||+|.++..+++. . +.+|+|+|+|+.+++.|++++... ++..+
T Consensus 38 ~l~~~~l~~~~~~-----~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1o9g_A 38 EIFQRALARLPGD-----GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELER 112 (250)
T ss_dssp HHHHHHHHTSSCC-----SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHhcccC-----CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhh
Confidence 4555555544322 3789999999999999999987 4 578999999999999999887654 33212
Q ss_pred ---------------------eE-------------EEEcCCCCCCC-----CCCCccEEEeccccCCCCC---------
Q 016921 210 ---------------------VS-------------FQVGDALQQPF-----PDGQFDLVWSMESGEHMPD--------- 241 (380)
Q Consensus 210 ---------------------v~-------------~~~~d~~~~~~-----~~~~fD~V~~~~~l~~~~~--------- 241 (380)
+. |.++|+.+... ..++||+|+++..+.+..+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~ 192 (250)
T 1o9g_A 113 REQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQP 192 (250)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHH
T ss_pred hhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccH
Confidence 56 99999887421 3458999999765544433
Q ss_pred HHHHHHHHHHhcCCCcEEEEEec
Q 016921 242 KSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 242 ~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
...+++++.++|+|||++++...
T Consensus 193 ~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 193 VAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHHHhcCCCcEEEEeCc
Confidence 35899999999999999999653
No 184
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.52 E-value=7.8e-15 Score=130.30 Aligned_cols=153 Identities=13% Similarity=0.095 Sum_probs=94.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EcCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~ 218 (380)
.+.+++..+.+.. ++.+|||||||||.++..+++. + .+|+|+|+|+.|++.++++.. ++... ..++.
T Consensus 24 kL~~~L~~~~~~~----~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~ 92 (232)
T 3opn_A 24 KLEKALKEFHLEI----NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFR 92 (232)
T ss_dssp HHHHHHHHTTCCC----TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGG
T ss_pred HHHHHHHHcCCCC----CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCc------cccccccceEE
Confidence 3456666665442 4779999999999999999987 5 599999999999998776432 22211 11111
Q ss_pred CC---CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCC-
Q 016921 219 QQ---PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLP- 294 (380)
Q Consensus 219 ~~---~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (380)
.. .++...||.+.+..++.++ ..++++++++|||||.+++.. . |..... ...+ .....+.
T Consensus 93 ~~~~~~~~~~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~--~----p~~e~~----~~~~---~~~G~~~d 156 (232)
T 3opn_A 93 NAVLADFEQGRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI--K----PQFEAG----REQV---GKNGIIRD 156 (232)
T ss_dssp GCCGGGCCSCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--C----HHHHSC----HHHH---C-CCCCCC
T ss_pred EeCHhHcCcCCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE--C----cccccC----HHHh---CcCCeecC
Confidence 11 1111234555544444443 679999999999999999863 1 100000 0000 0000000
Q ss_pred ---CCCCHHHHHHHHHhCCCcEEEEEecC
Q 016921 295 ---AWCSTADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 295 ---~~~~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
...+.+++.++++++||+++.+....
T Consensus 157 ~~~~~~~~~~l~~~l~~aGf~v~~~~~~p 185 (232)
T 3opn_A 157 PKVHQMTIEKVLKTATQLGFSVKGLTFSP 185 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHTEEEEEEEECS
T ss_pred cchhHHHHHHHHHHHHHCCCEEEEEEEcc
Confidence 01367899999999999998876543
No 185
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.51 E-value=9.2e-14 Score=122.90 Aligned_cols=101 Identities=19% Similarity=0.135 Sum_probs=87.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCCC----CC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFG------AKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQP----FP 223 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~------~~v~giD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~----~~ 223 (380)
++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++...++ ..++.++.+|+.+.. ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 488999999999999999998754 5999999999999999999887763 358999999998754 45
Q ss_pred CCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 224 ~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.++||+|++...++++ ++++.+.|||||++++...
T Consensus 160 ~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEc
Confidence 6789999999988876 4788999999999999764
No 186
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.51 E-value=1.4e-13 Score=124.87 Aligned_cols=96 Identities=28% Similarity=0.403 Sum_probs=84.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|+++. .++.+..+|+.++++++++||+|++..+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYAP 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCCh
Confidence 37899999999999999999976 789999999999999998754 46899999999988888999999987653
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 266 (380)
. .++++.++|||||.+++.++..
T Consensus 159 ~-------~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 C-------KAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp C-------CHHHHHHHEEEEEEEEEEEECT
T ss_pred h-------hHHHHHHhcCCCcEEEEEEcCH
Confidence 2 4899999999999999987543
No 187
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.51 E-value=2.7e-13 Score=128.21 Aligned_cols=117 Identities=20% Similarity=0.154 Sum_probs=96.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
+...++......+ +.+|||+|||+|.++..++... +.+++|+|+++.+++.|++++...++. +++|.++|+.
T Consensus 191 la~~l~~~~~~~~-----~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~ 264 (354)
T 3tma_A 191 LAQALLRLADARP-----GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADAR 264 (354)
T ss_dssp HHHHHHHHTTCCT-----TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGG
T ss_pred HHHHHHHHhCCCC-----CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChh
Confidence 4445556665544 7899999999999999999975 389999999999999999999999986 8999999999
Q ss_pred CCCCCCCCccEEEeccccCCC-C-------CHHHHHHHHHHhcCCCcEEEEEe
Q 016921 219 QQPFPDGQFDLVWSMESGEHM-P-------DKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~-~-------~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+++.+.+.||+|+++-..... . ....+++++.++|||||.+++..
T Consensus 265 ~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 265 HLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp GGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred hCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 987767789999996443221 1 12678999999999999999986
No 188
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.51 E-value=7.4e-14 Score=125.33 Aligned_cols=104 Identities=17% Similarity=0.230 Sum_probs=89.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-C-----CCCCccE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-F-----PDGQFDL 229 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~fD~ 229 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++.+|+.+. + + ++++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 6799999999999999999986 6899999999999999999999888877899999998763 2 1 1578999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
|++... ..+...+++++.++|||||.|++.+..
T Consensus 160 V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 160 IFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp EEECSC---STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred EEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 998654 346788999999999999999987643
No 189
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.51 E-value=5.4e-14 Score=137.77 Aligned_cols=117 Identities=23% Similarity=0.265 Sum_probs=95.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 139 ~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
..+.+.++..+... ++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++...++.++++++.+|+.
T Consensus 144 ~~~~~~il~~l~~~-----~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 144 GTYQRAILQNHTDF-----KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHTGGGT-----TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHHhhhhc-----CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchh
Confidence 34455555555433 3789999999999999999885356999999998 99999999999898889999999999
Q ss_pred CCCCCCCCccEEEeccccCCCCC--HHHHHHHHHHhcCCCcEEEEE
Q 016921 219 QQPFPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~~~ 262 (380)
+++++ ++||+|++..+++|+.+ ....+.++.++|||||.+++.
T Consensus 218 ~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 218 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 87665 68999999877777643 356778899999999999853
No 190
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.51 E-value=1.5e-14 Score=121.79 Aligned_cols=103 Identities=14% Similarity=0.095 Sum_probs=85.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-C--CCCCccEEEecc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-F--PDGQFDLVWSME 234 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~--~~~~fD~V~~~~ 234 (380)
+.+|||+|||+|.++..+++. +..|+|+|+|+.+++.|++++...++ +++++++|+.+. + . ..++||+|++..
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 789999999999999999987 66799999999999999999988776 799999998763 2 1 134899999987
Q ss_pred ccCCCCCHHHHHHHHH--HhcCCCcEEEEEeccC
Q 016921 235 SGEHMPDKSKFVSELA--RVTAPAGTIIIVTWCH 266 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~--r~LkpgG~l~~~~~~~ 266 (380)
.++ .+...+++.+. ++|||||.+++.....
T Consensus 119 ~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 119 PYA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 654 45566777777 9999999999987543
No 191
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.50 E-value=1.3e-13 Score=123.60 Aligned_cols=105 Identities=23% Similarity=0.429 Sum_probs=85.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--------CCCCCeEEEEcCCCC-CC--CCCC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--------GLADKVSFQVGDALQ-QP--FPDG 225 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~-~~--~~~~ 225 (380)
++.+|||||||+|.++..+++.. +..|+|+|+|+.+++.+++++... ++ .++.++.+|+.+ ++ ++.+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhcccc
Confidence 47899999999999999999986 569999999999999999988765 55 489999999987 45 6678
Q ss_pred CccEEEeccccCCCCCH--------HHHHHHHHHhcCCCcEEEEEe
Q 016921 226 QFDLVWSMESGEHMPDK--------SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 226 ~fD~V~~~~~l~~~~~~--------~~~l~~~~r~LkpgG~l~~~~ 263 (380)
++|.|++...-.+.... ..+++++.++|+|||.|++..
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 99999864322111110 489999999999999999964
No 192
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.50 E-value=9.8e-14 Score=131.10 Aligned_cols=101 Identities=24% Similarity=0.234 Sum_probs=87.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEec---cc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM---ES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~---~~ 235 (380)
+.+|||||||+|.++..+++....+|+++|.|+ +++.|++.++.+++.++|.++.+|++++.++ ++||+|++- ..
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 889999999999999888876346899999996 8899999999999999999999999998776 789999983 34
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEE
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIII 261 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~ 261 (380)
+.+-.....++....+.|||||.++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccchhhhHHHHHHhhCCCCceECC
Confidence 44445678899999999999999875
No 193
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.49 E-value=8.9e-14 Score=123.10 Aligned_cols=100 Identities=18% Similarity=0.293 Sum_probs=85.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHcCC----CCCeEEEEcCCCCCCCCC-C
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFG-------AKCQGITLSPVQAQRANALAAARGL----ADKVSFQVGDALQQPFPD-G 225 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~-------~~v~giD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~-~ 225 (380)
++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++...+. ..++.++.+|+.+ ++++ +
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 162 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNA 162 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGC
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCC
Confidence 488999999999999999998654 5999999999999999998876541 2579999999987 4444 7
Q ss_pred CccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 226 QFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 226 ~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+||+|++..+++++. +++.+.|||||++++...
T Consensus 163 ~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 163 PYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp SEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred CccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 899999999998875 689999999999999764
No 194
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.49 E-value=8.2e-14 Score=117.61 Aligned_cols=95 Identities=22% Similarity=0.289 Sum_probs=83.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCCc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (380)
++.+|||+|||+|.++..+++.+ +.+++|+|+++ +++. .++.+.++|+.+.+ +++++|
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 47899999999999999999985 48999999999 6532 47999999998876 667899
Q ss_pred cEEEeccccCCCCCH-----------HHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDK-----------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~-----------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|++...+++..+. ..+++++.++|+|||.+++..+
T Consensus 90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 999999888887765 6899999999999999999875
No 195
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.48 E-value=1.7e-13 Score=128.19 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=86.7
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCCCC----CCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQPF----PDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~----~~~~fD~V~~~ 233 (380)
+.+|||+|||+|.++..++.. +++|+++|+|+.+++.|++++...++.. ++.++++|+.++.. ..++||+|++.
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 789999999999999999986 7799999999999999999998888765 59999999877521 14689999984
Q ss_pred cc----------cCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 234 ES----------GEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 234 ~~----------l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
-- +.+..+...+++++.++|+|||.+++...
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 21 12234567899999999999999877653
No 196
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.47 E-value=1.2e-13 Score=130.14 Aligned_cols=102 Identities=22% Similarity=0.278 Sum_probs=88.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
+.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++...++ .+.++.+|+.+.+ +++||+|++...++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSEV--KGRFDMIISNPPFH 272 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTC--CSCEEEEEECCCCC
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEccccccc--cCCeeEEEECCCcc
Confidence 6799999999999999999985 46999999999999999999988775 3678899987653 67999999998887
Q ss_pred CC-----CCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 238 HM-----PDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 238 ~~-----~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+. .+...+++++.++|||||.+++...
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 52 3467899999999999999999864
No 197
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.47 E-value=1.1e-13 Score=123.42 Aligned_cols=97 Identities=15% Similarity=0.225 Sum_probs=80.8
Q ss_pred CCEEEEECCCcChHHHHHHHH----c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC---CCCC-CCccE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKK----F-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ---PFPD-GQFDL 229 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~----~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~-~~fD~ 229 (380)
+.+|||||||+|..+..+++. . +++|+|+|+++.+++.|+. ...+++++++|+.+. +... .+||+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~~~v~~~~gD~~~~~~l~~~~~~~fD~ 155 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DMENITLHQGDCSDLTTFEHLREMAHPL 155 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GCTTEEEEECCSSCSGGGGGGSSSCSSE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cCCceEEEECcchhHHHHHhhccCCCCE
Confidence 679999999999999999987 2 6899999999999988761 236899999999884 4333 47999
Q ss_pred EEeccccCCCCCHHHHHHHHHH-hcCCCcEEEEEec
Q 016921 230 VWSMESGEHMPDKSKFVSELAR-VTAPAGTIIIVTW 264 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r-~LkpgG~l~~~~~ 264 (380)
|++... | .+...++.++.+ +|||||+|++.+.
T Consensus 156 I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 156 IFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 998654 4 377889999997 9999999999764
No 198
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.47 E-value=6.3e-13 Score=126.50 Aligned_cols=127 Identities=26% Similarity=0.206 Sum_probs=101.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|++++...|+.+++++.++|+.+++.++++||+|+++-.+
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCC
Confidence 38899999999999999999874 23899999999999999999999998778999999999998777899999996443
Q ss_pred CCC-------CC-HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHh
Q 016921 237 EHM-------PD-KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQS 308 (380)
Q Consensus 237 ~~~-------~~-~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 308 (380)
..- .+ ...+++++.++| ||.+++... +.+.+.+.+++
T Consensus 297 g~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~---------------------------------~~~~~~~~~~~ 341 (373)
T 3tm4_A 297 GLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT---------------------------------EKKAIEEAIAE 341 (373)
T ss_dssp C------CCHHHHHHHHHHHHHHHE--EEEEEEEES---------------------------------CHHHHHHHHHH
T ss_pred CcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC---------------------------------CHHHHHHHHHH
Confidence 221 11 256788899988 555555441 35677788999
Q ss_pred CCCcEEEEEec
Q 016921 309 LSLEDIKAEDW 319 (380)
Q Consensus 309 aGf~~v~~~~~ 319 (380)
.||+..+...+
T Consensus 342 ~G~~~~~~~~~ 352 (373)
T 3tm4_A 342 NGFEIIHHRVI 352 (373)
T ss_dssp TTEEEEEEEEE
T ss_pred cCCEEEEEEEE
Confidence 99998776544
No 199
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.46 E-value=2.6e-13 Score=120.63 Aligned_cols=105 Identities=19% Similarity=0.253 Sum_probs=89.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC----CCCC--CCccEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ----PFPD--GQFDLV 230 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~--~~fD~V 230 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+. +..+ ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 6799999999999999999876 5799999999999999999998888877899999997542 2223 789999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 266 (380)
++... ..+...+++++.++|+|||.+++.+...
T Consensus 153 ~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 153 FIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred EECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 98654 3467889999999999999999977543
No 200
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.46 E-value=3.5e-13 Score=120.23 Aligned_cols=104 Identities=20% Similarity=0.285 Sum_probs=88.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C--------------
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-------------- 221 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-------------- 221 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++..++.++.+|+.+. +
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 7899999999999999999986 5799999999999999999998888866799999997652 1
Q ss_pred CCC--CCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 222 FPD--GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 222 ~~~--~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
+++ ++||+|++... ..+...+++++.++|+|||++++.+..
T Consensus 141 f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp TCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 222 78999998754 345678999999999999999997643
No 201
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.46 E-value=3.9e-14 Score=133.18 Aligned_cols=96 Identities=21% Similarity=0.265 Sum_probs=81.8
Q ss_pred CCEEEEECCC------cChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC------C
Q 016921 159 PKNVVDVGCG------IGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP------D 224 (380)
Q Consensus 159 ~~~vLDiGcG------tG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~ 224 (380)
+.+||||||| +|..+..+++.+ +++|+|+|+|+.|.. ..++++|+++|+.++++. +
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecccccchhhhhhccc
Confidence 7899999999 778888887764 789999999999731 225899999999998766 6
Q ss_pred CCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 225 GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 225 ~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
++||+|++.. .+++.+...+|++++++|||||++++.++.
T Consensus 287 ~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 287 GPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 8999999864 566678899999999999999999999875
No 202
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.45 E-value=3.4e-13 Score=123.45 Aligned_cols=101 Identities=23% Similarity=0.314 Sum_probs=84.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCc---cEEEec--
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQF---DLVWSM-- 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f---D~V~~~-- 233 (380)
+.+|||+|||+|.++..+++..+.+|+|+|+|+.+++.|++++...++..+++|+++|+.+. ++ ++| |+|+++
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSNPP 201 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEECCC
T ss_pred CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEcCC
Confidence 67999999999999999998745799999999999999999999988877799999999873 22 578 999996
Q ss_pred ----------cccCCCCC--------HHHHHHHHH-HhcCCCcEEEEE
Q 016921 234 ----------ESGEHMPD--------KSKFVSELA-RVTAPAGTIIIV 262 (380)
Q Consensus 234 ----------~~l~~~~~--------~~~~l~~~~-r~LkpgG~l~~~ 262 (380)
.+. |-+. ...+++++. +.|+|||.+++.
T Consensus 202 yi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 202 YVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp CBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred CCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 222 2221 227899999 999999999984
No 203
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.45 E-value=3.9e-13 Score=119.87 Aligned_cols=103 Identities=18% Similarity=0.270 Sum_probs=88.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-C-----CCCCccE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-F-----PDGQFDL 229 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~fD~ 229 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+. + + +.++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 6799999999999999999986 5899999999999999999999888877899999998763 2 1 2578999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|++... ..+...+++++.++|+|||.+++.+.
T Consensus 151 I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 151 GFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEECSC---GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EEECCc---hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 998643 24668899999999999999988764
No 204
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.45 E-value=1.9e-12 Score=123.17 Aligned_cols=103 Identities=12% Similarity=-0.018 Sum_probs=85.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCC-CCCCccEEEecc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPF-PDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~~fD~V~~~~ 234 (380)
++.+|||+| |+|.++..++... ..+|+|+|+++.+++.|+++++..|+. +++++++|+.+ ++. .+++||+|++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEECC
Confidence 378999999 9999999998874 369999999999999999999888875 89999999988 653 356899999976
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 235 SGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.++.. ....+++++.++|||||++++..
T Consensus 250 p~~~~-~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 250 PETLE-AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CSSHH-HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred CCchH-HHHHHHHHHHHHcccCCeEEEEE
Confidence 54332 35789999999999999654443
No 205
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=3.3e-13 Score=122.86 Aligned_cols=102 Identities=20% Similarity=0.060 Sum_probs=89.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|||+|||+|.++..+++.. +.+|+|+|+++.+++.|+++++..++. ++.++++|+.+.+. .++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCc-cCCceEEEECCcc
Confidence 48899999999999999999985 569999999999999999999988874 78999999988743 5789999987543
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
+...++.++.+.|+|||.+++.++.
T Consensus 197 ----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 197 ----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp ----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 5677899999999999999998864
No 206
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.44 E-value=1e-12 Score=119.07 Aligned_cols=128 Identities=16% Similarity=0.088 Sum_probs=103.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||+|||+|.++..++....++|+++|+++.+++.++++++.+++.+++.++++|+.+++ +.+.||.|++..-
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p-- 201 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGYV-- 201 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCC--
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCC--
Confidence 4899999999999999999987457999999999999999999999999889999999999876 4578999987532
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEE
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDI 314 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v 314 (380)
+....++..+.++||+||.|.+.++....... -...+.+.++.++.|+...
T Consensus 202 --~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~------------------------~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 202 --VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP------------------------REPFETFKRITKEYGYDVE 252 (278)
T ss_dssp --SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT------------------------TTTHHHHHHHHHHTTCEEE
T ss_pred --CcHHHHHHHHHHHcCCCCEEEEEeeecccccc------------------------hhHHHHHHHHHHHcCCcEE
Confidence 33456788899999999999887754321100 0234667788889998754
No 207
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.44 E-value=1.3e-13 Score=126.47 Aligned_cols=86 Identities=24% Similarity=0.329 Sum_probs=73.4
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.++.++..+.+.+ +.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++....+..++++++++|+.++
T Consensus 16 i~~~i~~~~~~~~-----~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 16 IINSIIDKAALRP-----TDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHTCCCT-----TCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHhcCCCC-----CCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 5667777776654 889999999999999999998 7899999999999999999886655546899999999987
Q ss_pred CCCCCCccEEEecc
Q 016921 221 PFPDGQFDLVWSME 234 (380)
Q Consensus 221 ~~~~~~fD~V~~~~ 234 (380)
+++ +||+|+++.
T Consensus 90 ~~~--~fD~vv~nl 101 (285)
T 1zq9_A 90 DLP--FFDTCVANL 101 (285)
T ss_dssp CCC--CCSEEEEEC
T ss_pred cch--hhcEEEEec
Confidence 764 799999854
No 208
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.43 E-value=5.9e-13 Score=115.26 Aligned_cols=95 Identities=19% Similarity=0.299 Sum_probs=77.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------------
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFG---AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------------- 221 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~---~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------- 221 (380)
++.+|||||||+|.++..+++..+ .+|+|+|+|+.. .. +++.++++|+.+.+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~~ 89 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDNM 89 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC---------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhccccccccc
Confidence 378999999999999999999863 799999999831 12 47999999998876
Q ss_pred ------------CCCCCccEEEeccccCCCC----CH-------HHHHHHHHHhcCCCcEEEEEec
Q 016921 222 ------------FPDGQFDLVWSMESGEHMP----DK-------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 222 ------------~~~~~fD~V~~~~~l~~~~----~~-------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+++++||+|++..++++.. +. ..+++++.++|||||.+++..+
T Consensus 90 ~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 90 NNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp --CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 5667999999988776642 22 2378999999999999998654
No 209
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.43 E-value=3.6e-13 Score=119.17 Aligned_cols=104 Identities=16% Similarity=0.225 Sum_probs=88.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCC----CCccEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPD----GQFDLV 230 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~----~~fD~V 230 (380)
+.+|||||||+|..+..+++.. +.+|+++|+++.+++.|++++...++..+++++++|+.+. .+.. ++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 7899999999999999999875 5799999999999999999999888877999999998653 1111 689999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
++... ..+...+++++.++|+|||.+++.+..
T Consensus 150 ~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 150 VVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred EECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 98654 345678999999999999999997654
No 210
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.41 E-value=3.4e-12 Score=124.42 Aligned_cols=107 Identities=21% Similarity=0.311 Sum_probs=90.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCCccEEEe-
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWS- 232 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~- 232 (380)
++.+|||+|||+|..+..+++.. + .+|+++|+++.+++.+++++...|+ .++.++++|+.+++ +++++||+|++
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 48899999999999999999976 3 7999999999999999999988887 47999999998875 55578999996
Q ss_pred -----ccccCCCCCH----------------HHHHHHHHHhcCCCcEEEEEecc
Q 016921 233 -----MESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 233 -----~~~l~~~~~~----------------~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
.+++++.++. ..+++++.++|||||+|++++..
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 3344544443 57899999999999999998743
No 211
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.40 E-value=7.5e-13 Score=120.65 Aligned_cols=106 Identities=11% Similarity=0.115 Sum_probs=88.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----CCCCccEEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----PDGQFDLVW 231 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~V~ 231 (380)
++.+|||+|||+|..+..+++.. + .+|+++|+++.+++.+++++...++. ++.++++|+.+++. ..++||+|+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccCCEEE
Confidence 48899999999999999999875 4 79999999999999999999988875 89999999987643 257899999
Q ss_pred ecc------ccC------------CCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 232 SME------SGE------------HMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 232 ~~~------~l~------------~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+.- ++. .......+++++.++|||||++++.+.
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 862 221 113457899999999999999999874
No 212
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.39 E-value=1e-11 Score=107.94 Aligned_cols=126 Identities=13% Similarity=-0.017 Sum_probs=96.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||+|||+|.++..+++....+|+|+|+++.+++.+++++...++ ++.++++|+.+++ ++||+|++.-.++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 3789999999999999999987334799999999999999999877765 7999999998864 4899999987776
Q ss_pred CCC--CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEE
Q 016921 238 HMP--DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIK 315 (380)
Q Consensus 238 ~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~ 315 (380)
+.. ....+++++.+++ ||.+++. ... . .+.+.+.+.+++.||+...
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~-~~~-----------~------------------~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIH-LAK-----------P------------------EVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEE-ECC-----------H------------------HHHHHHHHHHHHTTEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEE-eCC-----------c------------------CCHHHHHHHHHHCCCeEEE
Confidence 653 3357889999998 5544333 100 0 0234566788999998776
Q ss_pred EEecC
Q 016921 316 AEDWS 320 (380)
Q Consensus 316 ~~~~~ 320 (380)
+....
T Consensus 172 ~~~~~ 176 (207)
T 1wy7_A 172 RLTTK 176 (207)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 65444
No 213
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.39 E-value=7.1e-13 Score=121.72 Aligned_cols=105 Identities=15% Similarity=0.189 Sum_probs=82.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC----CCCCeEEEEcCCCCC-CCCCCCccEEEe
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG----LADKVSFQVGDALQQ-PFPDGQFDLVWS 232 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~-~~~~~~fD~V~~ 232 (380)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++.+...+ -.++++++.+|+.+. ...+++||+|++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 7899999999999999999865 5789999999999999999876531 135899999998774 334688999999
Q ss_pred ccccCCCCCH----HHHHHHHHHhcCCCcEEEEEe
Q 016921 233 MESGEHMPDK----SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 233 ~~~l~~~~~~----~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.......+.. ..+++++.++|+|||++++..
T Consensus 164 D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 164 DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 5543222221 679999999999999999875
No 214
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.35 E-value=1.9e-12 Score=111.45 Aligned_cols=107 Identities=19% Similarity=0.230 Sum_probs=80.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.+.+++....+- .++.+|||+|||+|.++..+++. +.+|+|+|+++.. .. .++.++++|+.+.
T Consensus 12 KL~ei~~~~~~~----~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~ 74 (191)
T 3dou_A 12 KLEFLLDRYRVV----RKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EI-AGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHHHCCS----CTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CC-TTCEEEECCTTSS
T ss_pred HHHHHHHHcCCC----CCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cC-CCeEEEEccccCH
Confidence 444555555432 24899999999999999999988 8899999999741 12 4799999999886
Q ss_pred CCC-----------CCCccEEEeccccCCCC----C-------HHHHHHHHHHhcCCCcEEEEEec
Q 016921 221 PFP-----------DGQFDLVWSMESGEHMP----D-------KSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 221 ~~~-----------~~~fD~V~~~~~l~~~~----~-------~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+.. .++||+|++........ | ...+++.+.++|||||.|++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 75 TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 421 14899999965432221 1 24678899999999999998775
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.35 E-value=1.2e-12 Score=122.23 Aligned_cols=104 Identities=21% Similarity=0.331 Sum_probs=83.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCC--CCCCCCccEEEe
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQ--PFPDGQFDLVWS 232 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~~~~~~fD~V~~ 232 (380)
+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++... ++ .++++++++|+.+. ..++++||+|++
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 7899999999999999999865 579999999999999999987642 33 35899999998764 234678999998
Q ss_pred ccccCC-CCC---HHHHHHHHHHhcCCCcEEEEE
Q 016921 233 MESGEH-MPD---KSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 233 ~~~l~~-~~~---~~~~l~~~~r~LkpgG~l~~~ 262 (380)
...... ..+ ...+++++.++|+|||.|++.
T Consensus 201 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 201 DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 543211 111 368999999999999999996
No 216
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.35 E-value=2.3e-13 Score=123.83 Aligned_cols=102 Identities=18% Similarity=0.143 Sum_probs=76.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCeEEE--EcCCCCCCCCCCCccEEEecc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAA-ARGLADKVSFQ--VGDALQQPFPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~-~~~~~~~v~~~--~~d~~~~~~~~~~fD~V~~~~ 234 (380)
++.+|||||||+|.++..+++. .+|+|+|+++ |+..+++... ......++.++ ++|+.+++ +++||+|++..
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~ 156 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDI 156 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECC
Confidence 4889999999999999999986 6899999998 5433221100 00011168999 99998875 68999999987
Q ss_pred ccCCCCCH----H---HHHHHHHHhcCCCc--EEEEEecc
Q 016921 235 SGEHMPDK----S---KFVSELARVTAPAG--TIIIVTWC 265 (380)
Q Consensus 235 ~l~~~~~~----~---~~l~~~~r~LkpgG--~l~~~~~~ 265 (380)
+ ++..++ . .+++++.++||||| .+++..+.
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 7 444332 1 37899999999999 99987654
No 217
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.34 E-value=1.3e-11 Score=106.80 Aligned_cols=87 Identities=16% Similarity=0.168 Sum_probs=71.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.+++++. +++++++|+.+++ ++||+|++...++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~---~~~D~v~~~~p~~ 121 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS---GKYDTWIMNPPFG 121 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---CCEEEEEECCCC-
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---CCeeEEEECCCch
Confidence 378999999999999999998623479999999999999998763 6899999998864 6899999999988
Q ss_pred CCCC--HHHHHHHHHHhc
Q 016921 238 HMPD--KSKFVSELARVT 253 (380)
Q Consensus 238 ~~~~--~~~~l~~~~r~L 253 (380)
|+.+ ...+++++.+++
T Consensus 122 ~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 122 SVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp ------CHHHHHHHHHHE
T ss_pred hccCchhHHHHHHHHHhc
Confidence 8854 247899999998
No 218
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.34 E-value=1.9e-12 Score=119.16 Aligned_cols=105 Identities=19% Similarity=0.245 Sum_probs=84.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--CCCCCCccEEEeccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ--PFPDGQFDLVWSMES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~V~~~~~ 235 (380)
+.+|||||||+|.++..+++.+ +.+|+++|+++.+++.|++.+.... .++++++++|+.+. .+++++||+|++...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 3599999999999999999976 7799999999999999999874321 35899999998764 345689999998543
Q ss_pred cCCC-CC---HHHHHHHHHHhcCCCcEEEEEec
Q 016921 236 GEHM-PD---KSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 236 l~~~-~~---~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.... +. ..+++++++++|+|||++++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 3221 11 26899999999999999998764
No 219
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.34 E-value=5.7e-12 Score=108.51 Aligned_cols=95 Identities=22% Similarity=0.331 Sum_probs=75.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EcCCCCCC-----
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFG----------AKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDALQQP----- 221 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~----------~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~----- 221 (380)
++.+|||||||+|.++..+++..+ .+|+|+|+|+.+ .. .++.++ .+|+...+
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHHH
Confidence 488999999999999999999863 799999999831 12 468899 89987643
Q ss_pred ---CCCCCccEEEeccccCCC----CCH-------HHHHHHHHHhcCCCcEEEEEec
Q 016921 222 ---FPDGQFDLVWSMESGEHM----PDK-------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 222 ---~~~~~fD~V~~~~~l~~~----~~~-------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+++++||+|++...++.. .+. ..+++++.++|||||.+++..+
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 345689999997655432 222 4789999999999999999875
No 220
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.34 E-value=2.8e-13 Score=122.56 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=75.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH-HHcCCCCCeEEE--EcCCCCCCCCCCCccEEEecc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALA-AARGLADKVSFQ--VGDALQQPFPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~~~~~~~~fD~V~~~~ 234 (380)
++.+|||||||+|.++..+++. .+|+|+|+++ |+..+++.. .......++.++ ++|+.+++ +++||+|++..
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~ 148 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDV 148 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeC
Confidence 4889999999999999999986 6899999998 532221110 000011168999 99998875 68999999987
Q ss_pred ccCCCCCH----H---HHHHHHHHhcCCCc--EEEEEecc
Q 016921 235 SGEHMPDK----S---KFVSELARVTAPAG--TIIIVTWC 265 (380)
Q Consensus 235 ~l~~~~~~----~---~~l~~~~r~LkpgG--~l~~~~~~ 265 (380)
+ ++..++ . .+++++.++||||| .+++..+.
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 7 554442 1 37899999999999 99987654
No 221
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.33 E-value=1.1e-12 Score=121.07 Aligned_cols=105 Identities=19% Similarity=0.265 Sum_probs=82.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEcCCCCC-CCCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RGL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~-~~~~~~fD~V~~~ 233 (380)
+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++.. .++ .++++++.+|+.+. +..+++||+|++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 7899999999999999999865 47999999999999999998765 233 46899999998762 3346789999985
Q ss_pred cccCCCC----CHHHHHHHHHHhcCCCcEEEEEe
Q 016921 234 ESGEHMP----DKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 234 ~~l~~~~----~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
......+ ....+++++.++|+|||.+++..
T Consensus 176 ~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 176 SSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp CC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 4332211 12468999999999999999865
No 222
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.33 E-value=1.7e-12 Score=120.61 Aligned_cols=105 Identities=20% Similarity=0.225 Sum_probs=85.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cC-C-CCCeEEEEcCCCCC-CCCCCCccEEEe
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RG-L-ADKVSFQVGDALQQ-PFPDGQFDLVWS 232 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~--~~-~-~~~v~~~~~d~~~~-~~~~~~fD~V~~ 232 (380)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++.. .+ + .++++++.+|+.+. +..+++||+|++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 6899999999999999999865 57999999999999999998764 22 2 36899999998763 334678999999
Q ss_pred ccccCC---CC--C--HHHHHHHHHHhcCCCcEEEEEe
Q 016921 233 MESGEH---MP--D--KSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 233 ~~~l~~---~~--~--~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
....++ -+ . ...+++++.++|||||.+++..
T Consensus 158 d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 158 DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 765543 11 1 3689999999999999999864
No 223
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.32 E-value=9e-13 Score=122.13 Aligned_cols=104 Identities=20% Similarity=0.286 Sum_probs=81.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCC-CCCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-~~~~~~fD~V~~~ 233 (380)
+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. +..+++||+|++.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d 188 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITD 188 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEEC
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEc
Confidence 6899999999999999999865 579999999999999999987543 23 46899999998763 3346789999985
Q ss_pred cccCCC-CCH----HHHHHHHHHhcCCCcEEEEEe
Q 016921 234 ESGEHM-PDK----SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 234 ~~l~~~-~~~----~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.. .++ +.. ..+++++.++|+|||.+++..
T Consensus 189 ~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 189 SS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred CC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 43 332 111 688999999999999999864
No 224
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.31 E-value=4.9e-11 Score=115.66 Aligned_cols=118 Identities=19% Similarity=0.349 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE
Q 016921 135 RAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV 214 (380)
Q Consensus 135 ~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~ 214 (380)
+.....+++.++..+.... +.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++. ++.|++
T Consensus 268 ~~~~e~l~~~~~~~l~~~~-----~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~ 340 (433)
T 1uwv_A 268 AGVNQKMVARALEWLDVQP-----EDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYH 340 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCT-----TCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred HHHHHHHHHHHHHhhcCCC-----CCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEE
Confidence 4455667777777776543 789999999999999999987 789999999999999999999888875 899999
Q ss_pred cCCCCC----CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 215 GDALQQ----PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 215 ~d~~~~----~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+|+.+. ++++++||+|++.---... ..+++.+.+ ++|++.++++.
T Consensus 341 ~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 341 ENLEEDVTKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp CCTTSCCSSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEES
T ss_pred CCHHHHhhhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEEC
Confidence 999872 3456789999984322211 245555544 78999888864
No 225
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.31 E-value=2.3e-12 Score=118.62 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=82.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEcCCCCC-CCCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RGL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~-~~~~~~fD~V~~~ 233 (380)
+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++.. .++ .++++++.+|+.+. +..+++||+|++.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 6899999999999999999875 57999999999999999998754 223 35899999998663 3345789999975
Q ss_pred cccCCCC-----CHHHHHHHHHHhcCCCcEEEEEe
Q 016921 234 ESGEHMP-----DKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 234 ~~l~~~~-----~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
..-.++. ....+++++.++|+|||.+++..
T Consensus 171 ~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 171 STDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp C----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 3221121 12688999999999999999964
No 226
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.31 E-value=2.5e-11 Score=114.25 Aligned_cols=104 Identities=18% Similarity=0.226 Sum_probs=86.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFG------AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVW 231 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~------~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 231 (380)
++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.++...++ ++.++++|..... +.++||+|+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~-~~~~fD~Ii 206 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL-LVDPVDVVI 206 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC-CCCCEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc-ccCCccEEE
Confidence 378999999999999999988762 7899999999999999999887776 5899999987643 457899999
Q ss_pred eccccCCCCCH------------------HHHHHHHHHhcCCCcEEEEEec
Q 016921 232 SMESGEHMPDK------------------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 232 ~~~~l~~~~~~------------------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
++-.+.+++.. ..+++++.+.|+|||++++...
T Consensus 207 ~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 207 SDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp EECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 98766555332 2579999999999999988763
No 227
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.31 E-value=5.6e-12 Score=122.23 Aligned_cols=105 Identities=12% Similarity=0.122 Sum_probs=86.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCCccEEEec-
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSM- 233 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~- 233 (380)
++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.+++++...|+. +.++++|+.+++ ..+++||+|++.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCEEEECC
Confidence 48999999999999999999876 369999999999999999999998885 999999988764 235789999951
Q ss_pred -----cccCCCCCH----------------HHHHHHHHHhcCCCcEEEEEec
Q 016921 234 -----ESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 234 -----~~l~~~~~~----------------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.++.+-++. ..+++++.++|||||+|+.++.
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 233332322 6789999999999999998764
No 228
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.31 E-value=4.4e-12 Score=115.53 Aligned_cols=105 Identities=21% Similarity=0.297 Sum_probs=84.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCC-CCCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-~~~~~~fD~V~~~ 233 (380)
+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. +..+++||+|++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 7899999999999999999864 479999999999999999987542 23 36899999998763 3345789999985
Q ss_pred cccCCCCC----HHHHHHHHHHhcCCCcEEEEEe
Q 016921 234 ESGEHMPD----KSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 234 ~~l~~~~~----~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
......+. ...+++++.++|+|||.+++..
T Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 156 STEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp CSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 44322211 2679999999999999999864
No 229
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.30 E-value=4e-12 Score=117.20 Aligned_cols=86 Identities=19% Similarity=0.335 Sum_probs=68.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.++.++..+.+.. +.+|||||||+|.++..+++. +.+|+|+|+++.+++.+++++...+. ++++++.+|+.++
T Consensus 30 i~~~i~~~~~~~~-----~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 30 ILDKIIYAAKIKS-----SDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS
T ss_pred HHHHHHHhcCCCC-----cCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC
Confidence 4566666666544 889999999999999999987 78999999999999999999877666 5899999999887
Q ss_pred CCCCCCccEEEeccc
Q 016921 221 PFPDGQFDLVWSMES 235 (380)
Q Consensus 221 ~~~~~~fD~V~~~~~ 235 (380)
++ .+||+|+++..
T Consensus 103 ~~--~~~D~Vv~n~p 115 (299)
T 2h1r_A 103 VF--PKFDVCTANIP 115 (299)
T ss_dssp CC--CCCSEEEEECC
T ss_pred Cc--ccCCEEEEcCC
Confidence 65 48999998543
No 230
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.30 E-value=2.1e-12 Score=123.28 Aligned_cols=106 Identities=16% Similarity=0.057 Sum_probs=85.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCC-C-C--CCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQ-P-F--PDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~-~-~--~~~~fD~V~~~ 233 (380)
+.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++..++.+ +++|+++|+.+. + . ..++||+|++.
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~D 292 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID 292 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEEC
Confidence 78999999999999999998633489999999999999999999988865 899999998763 2 1 24589999984
Q ss_pred ccc-----CCCC----CHHHHHHHHHHhcCCCcEEEEEec
Q 016921 234 ESG-----EHMP----DKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 234 ~~l-----~~~~----~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
--. .+.. +...+++.+.++|+|||.|++...
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 322 2232 345577888999999999999863
No 231
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.30 E-value=1.8e-12 Score=120.72 Aligned_cols=104 Identities=20% Similarity=0.237 Sum_probs=83.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH--cCC-CCCeEEEEcCCCCC-CCCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAA--RGL-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~-~~~~~~fD~V~~~ 233 (380)
+.+|||||||+|.++..+++.. +.+|+++|+|+.+++.|++++.. .++ .++++++++|+.+. +..+++||+|++.
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d 196 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 196 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEEC
Confidence 6899999999999999999865 57999999999999999998754 122 35899999998663 2235789999986
Q ss_pred cccCCC---CCH--HHHHHHHHHhcCCCcEEEEEe
Q 016921 234 ESGEHM---PDK--SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 234 ~~l~~~---~~~--~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.. .++ ... ..+++++.++|+|||.+++..
T Consensus 197 ~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 197 SS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred Cc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 43 222 111 689999999999999999964
No 232
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.29 E-value=4.5e-12 Score=121.62 Aligned_cols=106 Identities=12% Similarity=0.034 Sum_probs=88.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEcCCCCCCC----CCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL-ADKVSFQVGDALQQPF----PDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~----~~~~fD~V~~~ 233 (380)
+.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++ .++++++++|+.+... ..++||+|++.
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 789999999999999999986335999999999999999999998887 5589999999877521 14689999986
Q ss_pred c---------ccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 234 E---------SGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 234 ~---------~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
- ......+...++.++.+.|+|||.+++...
T Consensus 301 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp CSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3 222335667899999999999999999763
No 233
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.28 E-value=9e-12 Score=120.60 Aligned_cols=106 Identities=17% Similarity=0.165 Sum_probs=86.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCCccEEEecc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~~ 234 (380)
++.+|||+|||+|..+..+++.. ...|+++|+++.+++.+++++...|+. ++.++++|+..++ ..+++||+|++.-
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhccccCCEEEECC
Confidence 48999999999999999999876 369999999999999999999998884 7999999988764 2357899999732
Q ss_pred ------ccCCCCCH----------------HHHHHHHHHhcCCCcEEEEEec
Q 016921 235 ------SGEHMPDK----------------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 235 ------~l~~~~~~----------------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
++.+-++. ..++.++.++|||||+|+.++.
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 22221111 2689999999999999998774
No 234
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.28 E-value=1.2e-11 Score=115.99 Aligned_cols=98 Identities=19% Similarity=0.120 Sum_probs=85.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||+|||+|.++.. ++ .+.+|+|+|+|+.+++.+++++...++.+++.++++|+.+.. ++||+|++.-. .
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP-~- 268 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP-K- 268 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT-T-
T ss_pred CCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc-H-
Confidence 88999999999999999 87 478999999999999999999999988778999999998865 78999998532 1
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 239 MPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
....++..+.++|+|||.+++.++.
T Consensus 269 --~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 269 --FAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp --TGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred --hHHHHHHHHHHHcCCCCEEEEEEee
Confidence 1237889999999999999998754
No 235
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.28 E-value=1.7e-11 Score=119.85 Aligned_cols=107 Identities=17% Similarity=0.224 Sum_probs=88.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCCccEEEec-
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSM- 233 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~V~~~- 233 (380)
++.+|||+|||+|..+..+++.. ...|+++|+++.+++.+++++...|+. ++.++++|+..++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccccCCEEEECC
Confidence 48899999999999999999976 379999999999999999999988874 79999999988653 45789999972
Q ss_pred -----cccCCCCC----------------HHHHHHHHHHhcCCCcEEEEEecc
Q 016921 234 -----ESGEHMPD----------------KSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 234 -----~~l~~~~~----------------~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
.++.+.++ ...+++++.++|||||+|++++.+
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 22332222 136899999999999999998753
No 236
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.27 E-value=2.2e-11 Score=117.98 Aligned_cols=105 Identities=17% Similarity=0.249 Sum_probs=88.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCCccEEEe--
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWS-- 232 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~-- 232 (380)
++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.+++++...++ ++.++++|+.+++ +++++||+|++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 48899999999999999999986 47999999999999999999988886 4789999998875 55678999996
Q ss_pred ----ccccCCCCCH----------------HHHHHHHHHhcCCCcEEEEEec
Q 016921 233 ----MESGEHMPDK----------------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 233 ----~~~l~~~~~~----------------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.+++++.++. ..+++++.++|||||++++++.
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 2344444443 4789999999999999999874
No 237
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.26 E-value=4e-12 Score=116.30 Aligned_cols=105 Identities=20% Similarity=0.207 Sum_probs=83.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC--C-CCCeEEEEcCCCCC-CCCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG--L-ADKVSFQVGDALQQ-PFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~-~~~~~~fD~V~~~ 233 (380)
+.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...+ + .++++++.+|+.+. +..+++||+|++.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 158 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 158 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEc
Confidence 7899999999999999998865 5799999999999999999875421 1 35899999998763 2225789999985
Q ss_pred cccCCCCC--H--HHHHHHHHHhcCCCcEEEEEe
Q 016921 234 ESGEHMPD--K--SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 234 ~~l~~~~~--~--~~~l~~~~r~LkpgG~l~~~~ 263 (380)
....+.+. . ..+++++.++|+|||.+++..
T Consensus 159 ~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 159 SSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 44332221 1 689999999999999999874
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.26 E-value=6.5e-12 Score=128.50 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=87.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCC-CCCCCCccEEEecc--
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQ-PFPDGQFDLVWSME-- 234 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~-~~~~~~fD~V~~~~-- 234 (380)
+.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++..+++. .+++++++|+.+. +...++||+|++.-
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 619 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc
Confidence 8899999999999999998853346999999999999999999999886 5899999998873 33457899999843
Q ss_pred ---------ccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 235 ---------SGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 235 ---------~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
++.+..+...++..+.++|+|||.|++..
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 22223456788999999999999999876
No 239
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.26 E-value=3.8e-12 Score=116.31 Aligned_cols=103 Identities=18% Similarity=0.267 Sum_probs=81.3
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CC--------CCCeEEEEcCCCCC-CCCCCCc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--GL--------ADKVSFQVGDALQQ-PFPDGQF 227 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~--------~~~v~~~~~d~~~~-~~~~~~f 227 (380)
+.+|||||||+|.++..+++....+|+++|+++.+++.|++++ .. ++ .++++++.+|+.+. +. +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 7899999999999999998863469999999999999999987 33 22 36899999998653 22 5789
Q ss_pred cEEEeccccCCCC--C--HHHHHHHHHHhcCCCcEEEEEe
Q 016921 228 DLVWSMESGEHMP--D--KSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 228 D~V~~~~~l~~~~--~--~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
|+|++......-+ . ...+++++.++|+|||.+++..
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999865432111 1 2678999999999999999864
No 240
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.25 E-value=7.2e-12 Score=120.21 Aligned_cols=107 Identities=21% Similarity=0.186 Sum_probs=87.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----CCCCccEEEec
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----PDGQFDLVWSM 233 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~V~~~ 233 (380)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++.+++.++++|+.+... +.++||+|++.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 38899999999999999999862349999999999999999999988876589999999876521 25789999985
Q ss_pred cccCC---------CCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 234 ESGEH---------MPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 234 ~~l~~---------~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
--... ..+...++.++.++|+|||.+++...
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 32211 13456789999999999999998874
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.24 E-value=3.9e-12 Score=121.45 Aligned_cols=104 Identities=18% Similarity=0.115 Sum_probs=86.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----CCCCccEEEecc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----PDGQFDLVWSME 234 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD~V~~~~ 234 (380)
+.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++++...++. ++.++++|+.+... .+++||+|++.-
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 789999999999999999998 789999999999999999999988875 49999999877521 257899999843
Q ss_pred ccCC---------CCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 235 SGEH---------MPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 235 ~l~~---------~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
-... ..+...++.++.++|+|||.+++...
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 2211 12346789999999999999999874
No 242
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=1.9e-11 Score=116.69 Aligned_cols=104 Identities=23% Similarity=0.202 Sum_probs=83.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-CCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-FPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~~~l 236 (380)
++.+|||+|||+|.++..++.. ++.|+++|+|+.+++.|++++...++. ..+.++|+.+.. ...+.||+|++.-..
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred CCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 3889999999999999999986 778999999999999999999988875 356789987642 113449999986432
Q ss_pred CC---------CCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 237 EH---------MPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 237 ~~---------~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.. ..+...++..+.++|||||.|++...
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 11 12345788999999999999997764
No 243
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.23 E-value=4.6e-12 Score=113.35 Aligned_cols=79 Identities=18% Similarity=0.274 Sum_probs=65.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.++.++..+.+.. +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++... .++++++++|+.++
T Consensus 18 ~~~~i~~~~~~~~-----~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 18 NIDKIMTNIRLNE-----HDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVD---HDNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHTTCCCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTT---CCSEEEECCCGGGC
T ss_pred HHHHHHHhCCCCC-----CCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhcc---CCCeEEEEChHHhC
Confidence 5566666665543 889999999999999999998 68999999999999999987743 25899999999998
Q ss_pred CCCC-CCcc
Q 016921 221 PFPD-GQFD 228 (380)
Q Consensus 221 ~~~~-~~fD 228 (380)
++++ ..|+
T Consensus 89 ~~~~~~~~~ 97 (244)
T 1qam_A 89 KFPKNQSYK 97 (244)
T ss_dssp CCCSSCCCE
T ss_pred CcccCCCeE
Confidence 8764 4553
No 244
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.23 E-value=3.5e-12 Score=115.19 Aligned_cols=96 Identities=13% Similarity=0.004 Sum_probs=80.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCCeEEEEcCCCCCCCCCCCccEEEeccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--GL-ADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (380)
+.+|||||||+|..+..+++. +.+|+++|+++.+++.|++.+... ++ .++++++.+|+.+.. ++||+|++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d-- 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL-- 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES--
T ss_pred CCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC--
Confidence 689999999999999999887 689999999999999998765321 11 258999999998764 789999986
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
..++..+++++.++|+|||.+++..
T Consensus 147 ---~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 ---QEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ---SCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---CCChHHHHHHHHHhcCCCcEEEEEc
Confidence 3456679999999999999999864
No 245
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.23 E-value=6.3e-10 Score=104.79 Aligned_cols=185 Identities=18% Similarity=0.237 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHH--------c--------CCEEEEEeCCHHHHHHHHHHH
Q 016921 138 QVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKK--------F--------GAKCQGITLSPVQAQRANALA 201 (380)
Q Consensus 138 ~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~--------~--------~~~v~giD~s~~~~~~a~~~~ 201 (380)
...++++.+..+.......+...+|+|+|||+|.++..+... . ..+|...|+-.+.....=+.+
T Consensus 32 ~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L 111 (374)
T 3b5i_A 32 MLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLL 111 (374)
T ss_dssp HHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHS
T ss_pred HHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhh
Confidence 355666677766554211234689999999999999887432 1 246777777655432221111
Q ss_pred HHc-----------CCCCCeEEEEcCCC---CCCCCCCCccEEEeccccCCCC---------------------------
Q 016921 202 AAR-----------GLADKVSFQVGDAL---QQPFPDGQFDLVWSMESGEHMP--------------------------- 240 (380)
Q Consensus 202 ~~~-----------~~~~~v~~~~~d~~---~~~~~~~~fD~V~~~~~l~~~~--------------------------- 240 (380)
... +...+-.|+.+... .-.+|+++||+|++..+|||+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~ 191 (374)
T 3b5i_A 112 PPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK 191 (374)
T ss_dssp CCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH
T ss_pred hhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHH
Confidence 110 00001123333322 2357899999999999999986
Q ss_pred -----------CHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccc-----hHHHHHHHHH----------hhccCCC
Q 016921 241 -----------DKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQ-----PWEQELLKKI----------CDAYYLP 294 (380)
Q Consensus 241 -----------~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~----------~~~~~~~ 294 (380)
|...+|+..++.|+|||++++...+..+..+....-. ......+... .+.+.+|
T Consensus 192 v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P 271 (374)
T 3b5i_A 192 TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIP 271 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCcc
Confidence 3445788899999999999999877655322221000 0111112111 1122334
Q ss_pred C-CCCHHHHHHHHH-hCCCcEEEEEecCCC
Q 016921 295 A-WCSTADYVKLLQ-SLSLEDIKAEDWSQN 322 (380)
Q Consensus 295 ~-~~~~~~~~~ll~-~aGf~~v~~~~~~~~ 322 (380)
. +++.+++..+++ +.||++..++.+..+
T Consensus 272 ~y~ps~~E~~~~l~~~~~F~I~~le~~~~~ 301 (374)
T 3b5i_A 272 VYAPSLQDFKEVVDANGSFAIDKLVVYKGG 301 (374)
T ss_dssp BCCCCHHHHHHHHHHHCSEEEEEEEEEECC
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEEEEEeec
Confidence 2 478999999998 599999888766544
No 246
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.23 E-value=3.9e-11 Score=105.96 Aligned_cols=101 Identities=10% Similarity=0.115 Sum_probs=87.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
+.+|||||||+|.++..++... ..+|+++|+++.+++.+++++...|+. ..+.+.|...-+ +.++||+|++.-+++
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~-p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR-LDEPADVTLLLKTLP 209 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC-CCSCCSEEEETTCHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC-CCCCcchHHHHHHHH
Confidence 7799999999999999998765 789999999999999999999888864 788999987655 568899999999999
Q ss_pred CCCCH--HHHHHHHHHhcCCCcEEEEEe
Q 016921 238 HMPDK--SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 238 ~~~~~--~~~l~~~~r~LkpgG~l~~~~ 263 (380)
|+++. ...+ ++.+.|+|+|.++-.+
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 99653 3455 9999999999988865
No 247
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.22 E-value=4.4e-11 Score=109.02 Aligned_cols=114 Identities=18% Similarity=0.154 Sum_probs=83.8
Q ss_pred CCCCEEEEECCCc------ChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEE-EEcCCCCCCCCCCCc
Q 016921 157 KRPKNVVDVGCGI------GGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSF-QVGDALQQPFPDGQF 227 (380)
Q Consensus 157 ~~~~~vLDiGcGt------G~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~~f 227 (380)
.++.+|||+|||+ |. ..+++.. +.+|+|+|+++. + .++++ +++|+.+++++ ++|
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~~-~~f 124 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHTA-NKW 124 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCCS-SCE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCcc-Ccc
Confidence 3588999999944 66 4455554 479999999987 1 36889 99999987754 789
Q ss_pred cEEEeccccCC-----------CCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCC
Q 016921 228 DLVWSMESGEH-----------MPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAW 296 (380)
Q Consensus 228 D~V~~~~~l~~-----------~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (380)
|+|++...... ......+++++.++|||||.|++..+...
T Consensus 125 D~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~----------------------------- 175 (290)
T 2xyq_A 125 DLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----------------------------- 175 (290)
T ss_dssp EEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS-----------------------------
T ss_pred cEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC-----------------------------
Confidence 99998643221 11235899999999999999999764211
Q ss_pred CCHHHHHHHHHhCCCcEEEEE
Q 016921 297 CSTADYVKLLQSLSLEDIKAE 317 (380)
Q Consensus 297 ~~~~~~~~ll~~aGf~~v~~~ 317 (380)
..+++.+++++.||..++..
T Consensus 176 -~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 176 -WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp -CCHHHHHHHTTEEEEEEEEE
T ss_pred -CHHHHHHHHHHcCCcEEEEE
Confidence 12467788888899877654
No 248
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.21 E-value=5.2e-11 Score=104.21 Aligned_cols=100 Identities=16% Similarity=0.192 Sum_probs=84.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
++.+|||||||+|.++..++ .+..|+|+|+++.+++.+++.+...+ .+..+.++|....+.+ ++||+|++.-+++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~~-~~~DvvLllk~lh 179 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPPA-EAGDLALIFKLLP 179 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCCC-CBCSEEEEESCHH
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCCC-CCcchHHHHHHHH
Confidence 47899999999999999887 47899999999999999999988777 4689999999887654 6999999999999
Q ss_pred CCCCH--HHHHHHHHHhcCCCcEEEEEe
Q 016921 238 HMPDK--SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 238 ~~~~~--~~~l~~~~r~LkpgG~l~~~~ 263 (380)
|+.+. ...+ ++.+.|+++|.++-..
T Consensus 180 ~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 180 LLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 98543 3344 8888999998777755
No 249
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.20 E-value=5.5e-12 Score=116.42 Aligned_cols=100 Identities=18% Similarity=0.254 Sum_probs=73.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCCCCCCCCccEEEe
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITL----SPVQAQRANALAAARGLADKVSFQVG-DALQQPFPDGQFDLVWS 232 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~----s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~fD~V~~ 232 (380)
++.+|||||||+|.++..+++. .+|+|+|+ ++.+++.+. ....+ .+++.++++ |+..++ .++||+|++
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~--~~~fD~V~s 154 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP--PERCDTLLC 154 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC--cCCCCEEEE
Confidence 4789999999999999999986 58999999 554432111 00111 146899999 888765 578999999
Q ss_pred ccccC---CCCCHH---HHHHHHHHhcCCCcEEEEEec
Q 016921 233 MESGE---HMPDKS---KFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 233 ~~~l~---~~~~~~---~~l~~~~r~LkpgG~l~~~~~ 264 (380)
..++. +..+.. .++..+.++|||||.+++..+
T Consensus 155 d~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 155 DIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 76653 112222 578999999999999988654
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.18 E-value=3.3e-10 Score=109.16 Aligned_cols=97 Identities=19% Similarity=0.295 Sum_probs=79.1
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGEH 238 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 238 (380)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++. ++|+++|+.++. + .+||+|++.-.-..
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~-~-~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVS-V-KGFDTVIVDPPRAG 365 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCC-C-TTCSEEEECCCTTC
T ss_pred CCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcC-c-cCCCEEEEcCCccc
Confidence 789999999999999999986 789999999999999999999888874 999999999874 2 38999998543221
Q ss_pred CCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 239 MPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 239 ~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
. ...+++.+. .|+|||.++++.
T Consensus 366 ~--~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 L--HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp S--CHHHHHHHH-HHCCSEEEEEES
T ss_pred h--HHHHHHHHH-hcCCCcEEEEEC
Confidence 1 134555554 589999999875
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.16 E-value=1.5e-10 Score=105.92 Aligned_cols=87 Identities=22% Similarity=0.274 Sum_probs=75.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
.+++.+++.+.+.+ +.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++... ++++++++|+.+
T Consensus 37 ~i~~~Iv~~l~~~~-----~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~ 107 (295)
T 3gru_A 37 NFVNKAVESANLTK-----DDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALK 107 (295)
T ss_dssp HHHHHHHHHTTCCT-----TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTT
T ss_pred HHHHHHHHhcCCCC-----cCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhh
Confidence 36777777777654 889999999999999999998 889999999999999999988732 589999999999
Q ss_pred CCCCCCCccEEEeccc
Q 016921 220 QPFPDGQFDLVWSMES 235 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~ 235 (380)
+++++.+||.|+++..
T Consensus 108 ~~~~~~~fD~Iv~NlP 123 (295)
T 3gru_A 108 VDLNKLDFNKVVANLP 123 (295)
T ss_dssp SCGGGSCCSEEEEECC
T ss_pred CCcccCCccEEEEeCc
Confidence 8887778999997643
No 252
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.16 E-value=1.9e-13 Score=122.47 Aligned_cols=113 Identities=17% Similarity=0.217 Sum_probs=84.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.++.+++.+.+.. +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..++++++++|+.++
T Consensus 17 ~~~~i~~~~~~~~-----~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 17 VLNQIIKQLNLKE-----TDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQF 87 (245)
T ss_dssp THHHHHHHCCCCS-----SEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTT
T ss_pred HHHHHHHhcCCCC-----CCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhc
Confidence 4566677776554 889999999999999999998 6899999999999998877654 225799999999998
Q ss_pred CCCC-CCccEEEeccc-----------cCCCCCHHHHH----HHHHHhcCCCcEEEEEe
Q 016921 221 PFPD-GQFDLVWSMES-----------GEHMPDKSKFV----SELARVTAPAGTIIIVT 263 (380)
Q Consensus 221 ~~~~-~~fD~V~~~~~-----------l~~~~~~~~~l----~~~~r~LkpgG~l~~~~ 263 (380)
+++. ++| .|+++-- +.|..+...++ +.+.++|+|||.+.+..
T Consensus 88 ~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 88 QFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred CcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 8764 678 5555421 11122223344 67999999999987754
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.15 E-value=2.9e-10 Score=108.51 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=91.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-C--------------------------------------
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-G-------------------------------------- 181 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~-------------------------------------- 181 (380)
+...++...+... +..|||.+||+|.+++.++... +
T Consensus 189 lAa~ll~l~~~~~-----~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 189 MAAALVLLTSWHP-----DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp HHHHHHHHSCCCT-----TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHhCCCC-----CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 5556667666654 7899999999999999888753 2
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC-CC---CCHHHHHHHHHHhcCC--
Q 016921 182 AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE-HM---PDKSKFVSELARVTAP-- 255 (380)
Q Consensus 182 ~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~-~~---~~~~~~l~~~~r~Lkp-- 255 (380)
.+|+|+|+++.+++.|++++...|+..++.+.++|+.+++.+ ++||+|+++--.. .+ .+...+++.+.+.||+
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~ 342 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMP 342 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCC
Confidence 359999999999999999999999887899999999998754 5899999973221 12 1234566777777766
Q ss_pred CcEEEEEe
Q 016921 256 AGTIIIVT 263 (380)
Q Consensus 256 gG~l~~~~ 263 (380)
||.+++..
T Consensus 343 g~~~~iit 350 (393)
T 3k0b_A 343 TWSVYVLT 350 (393)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEE
Confidence 89888876
No 254
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.13 E-value=3.1e-09 Score=100.21 Aligned_cols=161 Identities=16% Similarity=0.166 Sum_probs=103.5
Q ss_pred CCEEEEECCCcChHHHHHHHH-------------c-----CCEEEEEeCC-----------HHHHHHHHHHHHHcCCCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKK-------------F-----GAKCQGITLS-----------PVQAQRANALAAARGLADK 209 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~-------------~-----~~~v~giD~s-----------~~~~~~a~~~~~~~~~~~~ 209 (380)
..+|+|+||++|.++..+... . ..+|+..|+. +.+.+..++ ..|...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 589999999999999888765 1 2468888987 444433222 2222123
Q ss_pred eEEEEcCCCCC---CCCCCCccEEEeccccCCCCCHH---------------------------------------HHHH
Q 016921 210 VSFQVGDALQQ---PFPDGQFDLVWSMESGEHMPDKS---------------------------------------KFVS 247 (380)
Q Consensus 210 v~~~~~d~~~~---~~~~~~fD~V~~~~~l~~~~~~~---------------------------------------~~l~ 247 (380)
..|+.+....+ .+|+++||+|+++.+|||+.+.. .+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777766553 58899999999999999985432 1255
Q ss_pred HHHHhcCCCcEEEEEeccCCCC--CCCcc-ccchHHHHHHHH------HhhccCCCC-CCCHHHHHHHHHhC-CCcEEEE
Q 016921 248 ELARVTAPAGTIIIVTWCHRDL--APSEE-SLQPWEQELLKK------ICDAYYLPA-WCSTADYVKLLQSL-SLEDIKA 316 (380)
Q Consensus 248 ~~~r~LkpgG~l~~~~~~~~~~--~~~~~-~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~ll~~a-Gf~~v~~ 316 (380)
..++.|+|||++++...+..+. .+... .+.......... -.+.+..|. +++.++++.+++++ ||++..+
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 5689999999999998876554 22111 111111111111 122233342 46899999999997 5888887
Q ss_pred EecCCC
Q 016921 317 EDWSQN 322 (380)
Q Consensus 317 ~~~~~~ 322 (380)
+.+...
T Consensus 290 e~~~~~ 295 (384)
T 2efj_A 290 ETFNAP 295 (384)
T ss_dssp EEEEEE
T ss_pred EEEeec
Confidence 765433
No 255
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.13 E-value=6.3e-10 Score=105.72 Aligned_cols=117 Identities=18% Similarity=0.106 Sum_probs=93.5
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-C--------------------------------------
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-G-------------------------------------- 181 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~-------------------------------------- 181 (380)
+...++...+... +..|||.+||+|.+++.++... +
T Consensus 182 LAaall~l~~~~~-----~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 182 MAAAIILLSNWFP-----DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp HHHHHHHHTTCCT-----TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHhCCCC-----CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 5555666666554 7899999999999999888653 2
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEec--cccCCC--CCHHHHHHHHHHhcCC--
Q 016921 182 AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSM--ESGEHM--PDKSKFVSELARVTAP-- 255 (380)
Q Consensus 182 ~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~--~~l~~~--~~~~~~l~~~~r~Lkp-- 255 (380)
.+|+|+|+++.+++.|++++...|+..++.|.++|+.+++.+ ++||+|+++ +....- .+...+++++.+.||+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLK 335 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCC
Confidence 359999999999999999999999988899999999998754 589999997 333211 2346677888888876
Q ss_pred CcEEEEEe
Q 016921 256 AGTIIIVT 263 (380)
Q Consensus 256 gG~l~~~~ 263 (380)
||.+++..
T Consensus 336 g~~~~iit 343 (384)
T 3ldg_A 336 TWSQFILT 343 (384)
T ss_dssp TSEEEEEE
T ss_pred CcEEEEEE
Confidence 99988876
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.10 E-value=5.6e-10 Score=106.30 Aligned_cols=117 Identities=18% Similarity=0.178 Sum_probs=92.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-C--------------------------------------
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-G-------------------------------------- 181 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~-------------------------------------- 181 (380)
+...++...+... +.+|||++||+|.+++.++... +
T Consensus 183 lAa~ll~~~~~~~-----~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 183 LAAGLIYLTPWKA-----GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp HHHHHHHTSCCCT-----TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHhhCCCC-----CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 5555666666544 7899999999999999988763 1
Q ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccccC-CC---CCHHHHHHHHHHhcCC--
Q 016921 182 AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESGE-HM---PDKSKFVSELARVTAP-- 255 (380)
Q Consensus 182 ~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~-~~---~~~~~~l~~~~r~Lkp-- 255 (380)
.+|+|+|+++.+++.|++++...++..+++|.++|+.+++.+ ++||+|+++--.. .+ .+...+++++.+.||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 479999999999999999999999877899999999998754 6899999965432 12 2345677777778876
Q ss_pred CcEEEEEe
Q 016921 256 AGTIIIVT 263 (380)
Q Consensus 256 gG~l~~~~ 263 (380)
||.+++..
T Consensus 337 g~~~~iit 344 (385)
T 3ldu_A 337 NWSYYLIT 344 (385)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 88888876
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.07 E-value=5.5e-10 Score=108.67 Aligned_cols=118 Identities=15% Similarity=0.222 Sum_probs=90.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHHHHHcCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--------------GAKCQGITLSPVQAQRANALAAARGL 206 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--------------~~~v~giD~s~~~~~~a~~~~~~~~~ 206 (380)
+++.+++.+... ++.+|||.|||+|.++..+++.. ..+++|+|+++.+++.|+.++...|+
T Consensus 159 v~~~mv~~l~~~-----~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~ 233 (445)
T 2okc_A 159 LIQAMVDCINPQ-----MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI 233 (445)
T ss_dssp HHHHHHHHHCCC-----TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCC-----CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 344455544433 37899999999999999888752 36799999999999999999887776
Q ss_pred CC-CeEEEEcCCCCCCCCCCCccEEEeccccCCCCC-----------------HHHHHHHHHHhcCCCcEEEEEec
Q 016921 207 AD-KVSFQVGDALQQPFPDGQFDLVWSMESGEHMPD-----------------KSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 207 ~~-~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~-----------------~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.. ++.+.++|....+.. ++||+|+++--+.+... ...+++.+.+.|||||++++...
T Consensus 234 ~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 234 GTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 43 678899998876543 58999999755443311 13789999999999999988763
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.06 E-value=5e-10 Score=100.47 Aligned_cols=82 Identities=16% Similarity=0.220 Sum_probs=68.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
.++.+++.+.+.. +.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .++++++++|+.++
T Consensus 17 i~~~iv~~~~~~~-----~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 17 VLQKIVSAIHPQK-----TDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTC
T ss_pred HHHHHHHhcCCCC-----cCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhC
Confidence 5666777777654 889999999999999999987 68999999999999999998854 25899999999998
Q ss_pred CCC----CCCccEEEe
Q 016921 221 PFP----DGQFDLVWS 232 (380)
Q Consensus 221 ~~~----~~~fD~V~~ 232 (380)
+++ +++|| |++
T Consensus 88 ~~~~~~~~~~~~-vv~ 102 (255)
T 3tqs_A 88 DFSSVKTDKPLR-VVG 102 (255)
T ss_dssp CGGGSCCSSCEE-EEE
T ss_pred CHHHhccCCCeE-EEe
Confidence 754 35688 444
No 259
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.06 E-value=4.7e-10 Score=106.43 Aligned_cols=115 Identities=19% Similarity=0.194 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE
Q 016921 135 RAAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV 214 (380)
Q Consensus 135 ~~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~ 214 (380)
......++..+++.+... +.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++..++ .+++|+.
T Consensus 196 ~~~~~~l~~~~~~~~~~~------~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~ 267 (369)
T 3bt7_A 196 AAMNIQMLEWALDVTKGS------KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIR 267 (369)
T ss_dssp HHHHHHHHHHHHHHTTTC------CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEEC
T ss_pred HHHHHHHHHHHHHHhhcC------CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEE
Confidence 344456667777766432 578999999999999999885 67999999999999999999998888 5899999
Q ss_pred cCCCCCC--CCC--------------CCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 215 GDALQQP--FPD--------------GQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 215 ~d~~~~~--~~~--------------~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+|+.+.. +.. .+||+|++.--- ..+..++.+.|+++|.++...
T Consensus 268 ~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 268 MAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp CCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEE
T ss_pred CCHHHHHHHHhhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEE
Confidence 9987641 111 379999874211 123456777888999988876
No 260
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.01 E-value=4.9e-09 Score=98.02 Aligned_cols=162 Identities=14% Similarity=0.125 Sum_probs=105.9
Q ss_pred CCCEEEEECCCcChHHHHHHHH----------------c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKK----------------F-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ- 219 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~----------------~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 219 (380)
...+|+|+||++|.++..+... . ..+|+..|+..+.....-+.+.......+..|+.+....
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3578999999999887765443 1 257999999888777665544321000123555555444
Q ss_pred --CCCCCCCccEEEeccccCCCCCH---------------------------------HHHHHHHHHhcCCCcEEEEEec
Q 016921 220 --QPFPDGQFDLVWSMESGEHMPDK---------------------------------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 220 --~~~~~~~fD~V~~~~~l~~~~~~---------------------------------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
-.+|++++|+|+++.++||+.+. ..+|+..++.|+|||++++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 46889999999999999998542 2348888999999999999988
Q ss_pred cCCCCCCCcc---ccchHHHHHHHHHh----------hccCCCC-CCCHHHHHHHHHhCC-CcEEEEEec
Q 016921 265 CHRDLAPSEE---SLQPWEQELLKKIC----------DAYYLPA-WCSTADYVKLLQSLS-LEDIKAEDW 319 (380)
Q Consensus 265 ~~~~~~~~~~---~~~~~~~~~~~~~~----------~~~~~~~-~~~~~~~~~ll~~aG-f~~v~~~~~ 319 (380)
+..+..+... .+.......+..+. +.+..|. +++.++++.++++.| |++...+.+
T Consensus 211 gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 211 GRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp ECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 7766433221 11122222232111 1223332 568999999999996 577766544
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.01 E-value=3.7e-09 Score=97.49 Aligned_cols=105 Identities=13% Similarity=0.103 Sum_probs=80.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC---CCccEEEe
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPD---GQFDLVWS 232 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~fD~V~~ 232 (380)
++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+ .++.++++|+.+++... ++||.|++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCccccccCCCCEEEE
Confidence 48999999999999999999875 47999999999999999999998887 47999999998865322 57999997
Q ss_pred c------cccCCCC-----------CH-------HHHHHHHHHhcCCCcEEEEEec
Q 016921 233 M------ESGEHMP-----------DK-------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 233 ~------~~l~~~~-----------~~-------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
. +++..-+ +. .+++..+.+.|+ ||+|+.++.
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 2 2222111 11 235777777776 998888763
No 262
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.99 E-value=1.1e-09 Score=105.61 Aligned_cols=108 Identities=18% Similarity=0.280 Sum_probs=81.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
+++.+++.+... ++.+|||+|||+|.++..++++. +.+++|+|+++.+++.| .++.++++|+.
T Consensus 27 l~~~~~~~~~~~-----~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~ 91 (421)
T 2ih2_A 27 VVDFMVSLAEAP-----RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFL 91 (421)
T ss_dssp HHHHHHHHCCCC-----TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGG
T ss_pred HHHHHHHhhccC-----CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChh
Confidence 455556655432 36799999999999999999874 57999999999988765 36899999998
Q ss_pred CCCCCCCCccEEEecccc---CC-------CCCH-------------------HHHHHHHHHhcCCCcEEEEEec
Q 016921 219 QQPFPDGQFDLVWSMESG---EH-------MPDK-------------------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l---~~-------~~~~-------------------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+.. +.++||+|+++--. .. +.+. ..+++.+.++|+|||++++...
T Consensus 92 ~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 92 LWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp GCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 865 35789999995211 11 2111 2568999999999999998764
No 263
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.99 E-value=7.6e-10 Score=100.04 Aligned_cols=89 Identities=21% Similarity=0.194 Sum_probs=72.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
..++.+++.+.+.+ + +|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .+++++++|+.+
T Consensus 34 ~i~~~Iv~~~~~~~-----~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~ 102 (271)
T 3fut_A 34 AHLRRIVEAARPFT-----G-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALL 102 (271)
T ss_dssp HHHHHHHHHHCCCC-----S-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGG
T ss_pred HHHHHHHHhcCCCC-----C-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhh
Confidence 35677777777664 7 9999999999999999997 78999999999999999987742 589999999999
Q ss_pred CCCCCC-CccEEEeccccCCCC
Q 016921 220 QPFPDG-QFDLVWSMESGEHMP 240 (380)
Q Consensus 220 ~~~~~~-~fD~V~~~~~l~~~~ 240 (380)
+++++. .+|.|+++. -+++.
T Consensus 103 ~~~~~~~~~~~iv~Nl-Py~is 123 (271)
T 3fut_A 103 YPWEEVPQGSLLVANL-PYHIA 123 (271)
T ss_dssp SCGGGSCTTEEEEEEE-CSSCC
T ss_pred CChhhccCccEEEecC-ccccc
Confidence 876542 688877654 34443
No 264
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.95 E-value=1.1e-09 Score=103.86 Aligned_cols=101 Identities=13% Similarity=0.005 Sum_probs=84.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCCCC-eEEEEcCCCCCC--CCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-G-AKCQGITLSPVQAQRANALAAARGLADK-VSFQVGDALQQP--FPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~-~~v~giD~s~~~~~~a~~~~~~~~~~~~-v~~~~~d~~~~~--~~~~~fD~V~~~ 233 (380)
+.+|||++||+|.+++.++.+. + .+|+++|+++..++.++++++.+++.++ ++++.+|+.+.. ...++||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 7899999999999999999875 4 6899999999999999999999998766 999999986541 124679999975
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
- ......++..+.+.|++||.|+++.
T Consensus 133 P----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 4 1233568999999999999888865
No 265
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.95 E-value=9.1e-10 Score=101.06 Aligned_cols=88 Identities=20% Similarity=0.240 Sum_probs=72.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
+++.++..+.+.+ +.+|||+|||+|..+..+++.. +.+|+|+|+|+.+++.|++++...+ .++.++++|+.+
T Consensus 14 Ll~e~l~~L~~~~-----g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~ 86 (301)
T 1m6y_A 14 MVREVIEFLKPED-----EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYRE 86 (301)
T ss_dssp THHHHHHHHCCCT-----TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGG
T ss_pred HHHHHHHhcCCCC-----CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHH
Confidence 4556666666544 8899999999999999999987 6899999999999999999987766 589999999987
Q ss_pred CC--CC---CCCccEEEeccc
Q 016921 220 QP--FP---DGQFDLVWSMES 235 (380)
Q Consensus 220 ~~--~~---~~~fD~V~~~~~ 235 (380)
++ +. .++||.|++...
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHhcCCCCCCEEEEcCc
Confidence 64 11 158999997543
No 266
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.94 E-value=8e-10 Score=102.90 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=80.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC---CC----CCeEEEEcCCCCCCC----CCCC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG---LA----DKVSFQVGDALQQPF----PDGQ 226 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~---~~----~~v~~~~~d~~~~~~----~~~~ 226 (380)
++.+||+||||+|..+..+++....+|+++|+++.+++.|++.+.... +. ++++++.+|+...-- ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 578999999999999999988655789999999999999999864321 21 279999999877421 3578
Q ss_pred ccEEEecccc-CC--CC---CHHHHHHHH----HHhcCCCcEEEEEe
Q 016921 227 FDLVWSMESG-EH--MP---DKSKFVSEL----ARVTAPAGTIIIVT 263 (380)
Q Consensus 227 fD~V~~~~~l-~~--~~---~~~~~l~~~----~r~LkpgG~l~~~~ 263 (380)
||+|++...- .. .+ -...+++.+ .++|+|||.+++..
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 9999986432 11 11 124566666 89999999999865
No 267
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.93 E-value=1.2e-09 Score=103.50 Aligned_cols=100 Identities=14% Similarity=0.039 Sum_probs=82.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc---------------CCCCCeEEEEcCCCCCC-
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR---------------GLADKVSFQVGDALQQP- 221 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~---------------~~~~~v~~~~~d~~~~~- 221 (380)
+.+|||+|||+|..++.++.+. +.+|+++|+++.+++.++++++.. ++. +++++++|+..+.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHHH
Confidence 7899999999999999999986 568999999999999999999887 764 4999999987642
Q ss_pred CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 222 FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 222 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
...++||+|++. -. .....++..+.+.||+||.++++.
T Consensus 127 ~~~~~fD~I~lD-P~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLD-PF---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEEC-CS---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeC-CC---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 113579999953 22 233678999999999999888764
No 268
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.92 E-value=4.4e-08 Score=84.09 Aligned_cols=98 Identities=17% Similarity=0.089 Sum_probs=78.9
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCCeEEEEcCCCCC---------------C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGL--ADKVSFQVGDALQQ---------------P 221 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~---------------~ 221 (380)
..+|||+|| |..+..+++..+.+|+.+|.+++..+.|++.++..|+ ..+++++.+|+.+. +
T Consensus 31 a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 679999998 4677888873368999999999999999999999998 78999999997542 1
Q ss_pred --------C-CCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 222 --------F-PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 222 --------~-~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
. ..++||+|++..- .....+..+.+.|+|||.|++-+
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeC
Confidence 1 2378999998763 23467777889999999996643
No 269
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.89 E-value=1.5e-08 Score=101.20 Aligned_cols=101 Identities=15% Similarity=0.093 Sum_probs=77.5
Q ss_pred CCCEEEEECCCcChHHHHHH---HHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEe
Q 016921 158 RPKNVVDVGCGIGGSSRYLA---KKFGA--KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWS 232 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~---~~~~~--~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 232 (380)
....|||||||+|.+....+ ++.+. +|++||-|+ +...+++..+.+++.++|+++.+|++++..| +++|+|++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVS 434 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVS 434 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEE
Confidence 35689999999999854443 33333 789999997 6677888888899999999999999998765 78999997
Q ss_pred ccccCCC--CCHHHHHHHHHHhcCCCcEEE
Q 016921 233 MESGEHM--PDKSKFVSELARVTAPAGTII 260 (380)
Q Consensus 233 ~~~l~~~--~~~~~~l~~~~r~LkpgG~l~ 260 (380)
-.+=..+ .....++....+.|||||.++
T Consensus 435 EwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 435 ELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 4322222 223467888889999999864
No 270
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.87 E-value=2.9e-10 Score=102.24 Aligned_cols=79 Identities=24% Similarity=0.319 Sum_probs=65.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCH-------HHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-CCC--CCc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSP-------VQAQRANALAAARGLADKVSFQVGDALQQ-P-FPD--GQF 227 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~-------~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~~--~~f 227 (380)
+.+|||+|||+|..+..++.. +++|+|+|+++ .+++.|++++...++..+++++++|+.++ + +++ ++|
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred cCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 689999999999999999986 78999999999 99999988876666655699999999874 2 334 789
Q ss_pred cEEEeccccCC
Q 016921 228 DLVWSMESGEH 238 (380)
Q Consensus 228 D~V~~~~~l~~ 238 (380)
|+|++.-.+.+
T Consensus 163 D~V~~dP~~~~ 173 (258)
T 2r6z_A 163 DIVYLDPMYPE 173 (258)
T ss_dssp SEEEECCCC--
T ss_pred cEEEECCCCCC
Confidence 99999766554
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.85 E-value=6.5e-09 Score=94.39 Aligned_cols=72 Identities=18% Similarity=0.267 Sum_probs=60.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCE----EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAK----CQGITLSPVQAQRANALAAARGLADKVSFQVGD 216 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~----v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 216 (380)
.++.+++.+.+.. +.+|||||||+|.++..+++. +.. |+|+|+++.|++.++++. ..+++++++|
T Consensus 30 i~~~iv~~~~~~~-----~~~VLEIG~G~G~lt~~La~~-~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D 98 (279)
T 3uzu_A 30 VIDAIVAAIRPER-----GERMVEIGPGLGALTGPVIAR-LATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGD 98 (279)
T ss_dssp HHHHHHHHHCCCT-----TCEEEEECCTTSTTHHHHHHH-HCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESC
T ss_pred HHHHHHHhcCCCC-----cCEEEEEccccHHHHHHHHHh-CCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECC
Confidence 5566777776654 889999999999999999987 455 999999999999999883 2579999999
Q ss_pred CCCCCCC
Q 016921 217 ALQQPFP 223 (380)
Q Consensus 217 ~~~~~~~ 223 (380)
+.+++++
T Consensus 99 ~~~~~~~ 105 (279)
T 3uzu_A 99 ALTFDFG 105 (279)
T ss_dssp GGGCCGG
T ss_pred hhcCChh
Confidence 9998754
No 272
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.85 E-value=1.7e-08 Score=103.30 Aligned_cols=118 Identities=18% Similarity=0.183 Sum_probs=88.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc----------------------------------------
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF---------------------------------------- 180 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~---------------------------------------- 180 (380)
+...++...+... +..|||.+||+|.+++.++...
T Consensus 178 LAa~ll~~~~~~~-----~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 178 LAAAIVMRSGWQP-----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp HHHHHHHHTTCCT-----TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCC-----CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 5556666666544 7899999999999998887642
Q ss_pred ---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--CCCCCccEEEec--cccCCCC--CHHHHHH---H
Q 016921 181 ---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--FPDGQFDLVWSM--ESGEHMP--DKSKFVS---E 248 (380)
Q Consensus 181 ---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~V~~~--~~l~~~~--~~~~~l~---~ 248 (380)
...++|+|+++.+++.|++++...|+...+.|.++|+.++. ...++||+|+++ +....-. +...+++ +
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 15799999999999999999999999878999999998873 333489999997 3322211 2334444 4
Q ss_pred HHHhcCCCcEEEEEe
Q 016921 249 LARVTAPAGTIIIVT 263 (380)
Q Consensus 249 ~~r~LkpgG~l~~~~ 263 (380)
+.+.+.|||.+++..
T Consensus 333 ~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 333 IMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHCTTCEEEEEE
T ss_pred HHHhhCCCCeEEEEe
Confidence 455556899998865
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.83 E-value=1.8e-08 Score=90.13 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=72.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
..++.+++.+.+.. +.+|||||||+|.++..+++....+|+|+|+++.+++.++++ + ..+++++++|+.+
T Consensus 18 ~i~~~iv~~~~~~~-----~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 18 GVLKKIAEELNIEE-----GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----G-DERLEVINEDASK 87 (249)
T ss_dssp HHHHHHHHHTTCCT-----TCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTT
T ss_pred HHHHHHHHhcCCCC-----cCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhh
Confidence 35677777776654 889999999999999999987338999999999999999876 1 2579999999999
Q ss_pred CCCCCCCccEEEeccccCCCCCHHHHHHHHHH
Q 016921 220 QPFPDGQFDLVWSMESGEHMPDKSKFVSELAR 251 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r 251 (380)
+++++..-+.++..+.-+++. ..++.++.+
T Consensus 88 ~~~~~~~~~~~vv~NlPy~i~--~~il~~ll~ 117 (249)
T 3ftd_A 88 FPFCSLGKELKVVGNLPYNVA--SLIIENTVY 117 (249)
T ss_dssp CCGGGSCSSEEEEEECCTTTH--HHHHHHHHH
T ss_pred CChhHccCCcEEEEECchhcc--HHHHHHHHh
Confidence 876542113344444444443 234444444
No 274
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.78 E-value=3.5e-09 Score=100.76 Aligned_cols=73 Identities=21% Similarity=0.124 Sum_probs=64.1
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CCCCCeEEEEcCCCCC-CC-CCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--GLADKVSFQVGDALQQ-PF-PDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~-~~-~~~~fD~V~~~ 233 (380)
+.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++... |+ .+++++++|+.+. +. ++++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 789999999999999999886 789999999999999999999887 77 6899999999874 31 23689999983
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.76 E-value=2.2e-08 Score=99.47 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=82.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-------------------CCEEEEEeCCHHHHHHHHHHHHHcCCCC----CeEEEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-------------------GAKCQGITLSPVQAQRANALAAARGLAD----KVSFQV 214 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-------------------~~~v~giD~s~~~~~~a~~~~~~~~~~~----~v~~~~ 214 (380)
++.+|||.|||+|.++..+++.. ...++|+|+++.++..|+.++...+... ++.+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 37899999999999998887753 1379999999999999999887777643 277899
Q ss_pred cCCCCCC-CCCCCccEEEeccccCCCC-------------C-HHHHHHHHHHhcCCCcEEEEEec
Q 016921 215 GDALQQP-FPDGQFDLVWSMESGEHMP-------------D-KSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 215 ~d~~~~~-~~~~~fD~V~~~~~l~~~~-------------~-~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|....+ .+.++||+|+++--+.... + ...+++.+.+.|||||++.+...
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 9986643 3457899999864332221 1 23789999999999999888763
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.74 E-value=9.7e-09 Score=92.08 Aligned_cols=129 Identities=19% Similarity=0.212 Sum_probs=87.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-------C------CEEEEEeCCH---HHHH-----------HHHHHHHHcC-----
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-------G------AKCQGITLSP---VQAQ-----------RANALAAARG----- 205 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-------~------~~v~giD~s~---~~~~-----------~a~~~~~~~~----- 205 (380)
++.+|||||+|+|..+..+++.. . .+++++|..| +++. .|++.+....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 36799999999999998876542 1 4899999876 4444 4555554310
Q ss_pred -----C---CCCeEEEEcCCCC-CC-CCC---CCccEEEecc-ccCCCCC--HHHHHHHHHHhcCCCcEEEEEeccCCCC
Q 016921 206 -----L---ADKVSFQVGDALQ-QP-FPD---GQFDLVWSME-SGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDL 269 (380)
Q Consensus 206 -----~---~~~v~~~~~d~~~-~~-~~~---~~fD~V~~~~-~l~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~ 269 (380)
+ ..+++++.+|+.+ ++ .++ ..||+|+... .-...++ ...+++.++++|+|||+|+. ++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa--- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS--- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC---
Confidence 1 1357789999876 33 222 2799999853 2222233 26799999999999999885 210
Q ss_pred CCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 016921 270 APSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
...++..|+++||++.....+.
T Consensus 215 -----------------------------a~~vrr~L~~aGF~v~~~~g~~ 236 (257)
T 2qy6_A 215 -----------------------------AGFVRRGLQEAGFTMQKRKGFG 236 (257)
T ss_dssp -----------------------------BHHHHHHHHHHTEEEEEECCST
T ss_pred -----------------------------CHHHHHHHHHCCCEEEeCCCCC
Confidence 1346778889999988765543
No 277
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.72 E-value=6.9e-09 Score=92.94 Aligned_cols=96 Identities=23% Similarity=0.238 Sum_probs=68.0
Q ss_pred CEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc-------C-CCCCeEEEEcCCCCC-CCCCCCccEE
Q 016921 160 KNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR-------G-LADKVSFQVGDALQQ-PFPDGQFDLV 230 (380)
Q Consensus 160 ~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~-------~-~~~~v~~~~~d~~~~-~~~~~~fD~V 230 (380)
.+|||++||+|..+..++.. +++|+++|+++.+.+.++..++.. + +..+++++++|+.++ +...++||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 89999999999999999998 789999999998877666654322 1 224699999998763 3222479999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCc
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAG 257 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG 257 (380)
++.-.+.+- ...+.+++..++|++.+
T Consensus 169 ~lDP~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 169 YLDPMFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EECCCCCCC-CC-----HHHHHHHHHS
T ss_pred EEcCCCCCc-ccchHHHHHHHHHHHhh
Confidence 997666553 33355666667776654
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.72 E-value=3.1e-08 Score=98.86 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=74.2
Q ss_pred CCEEEEECCCcChHHHHHHHH---cC-----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC-
Q 016921 159 PKNVVDVGCGIGGSSRYLAKK---FG-----------AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP- 223 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~---~~-----------~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 223 (380)
+..|||||||+|.+....+.. .+ .+|++||.++......+.+.. .++.++|+++.+|++++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 568999999999996433221 12 389999999977765555554 67878899999999998653
Q ss_pred ----CCCccEEEeccccCCCCC---HHHHHHHHHHhcCCCcEEE
Q 016921 224 ----DGQFDLVWSMESGEHMPD---KSKFVSELARVTAPAGTII 260 (380)
Q Consensus 224 ----~~~fD~V~~~~~l~~~~~---~~~~l~~~~r~LkpgG~l~ 260 (380)
.+++|+|++-.. ..+.+ ....+..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 589999997544 33322 2467888889999999754
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.67 E-value=1.2e-08 Score=91.28 Aligned_cols=72 Identities=17% Similarity=0.174 Sum_probs=58.0
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAK--CQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~--v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
+++.+++.+.+.. +.+|||||||+|.++. ++ . +.+ |+++|+++.|++.++++.... ++++++++|+.
T Consensus 9 i~~~iv~~~~~~~-----~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~ 77 (252)
T 1qyr_A 9 VIDSIVSAINPQK-----GQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAM 77 (252)
T ss_dssp HHHHHHHHHCCCT-----TCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGG
T ss_pred HHHHHHHhcCCCC-----cCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchh
Confidence 5666677766654 8899999999999999 65 4 466 999999999999998866432 47999999999
Q ss_pred CCCCC
Q 016921 219 QQPFP 223 (380)
Q Consensus 219 ~~~~~ 223 (380)
+++++
T Consensus 78 ~~~~~ 82 (252)
T 1qyr_A 78 TFNFG 82 (252)
T ss_dssp GCCHH
T ss_pred hCCHH
Confidence 88654
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.65 E-value=5.7e-08 Score=86.37 Aligned_cols=115 Identities=14% Similarity=0.131 Sum_probs=75.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
.+.++.+...++ ++.+|||||||+|.|+..++++.+ ..++|+|++..+....... ...+ .++.....+++.
T Consensus 62 KL~ei~ek~~l~-----~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~dv 133 (277)
T 3evf_A 62 KLRWFHERGYVK-----LEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKTDI 133 (277)
T ss_dssp HHHHHHHTTSSC-----CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSCCT
T ss_pred HHHHHHHhCCCC-----CCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC--CCeEEEecccee
Confidence 445555553344 478999999999999999887643 4688888874321000000 0001 145556666655
Q ss_pred CCCCCCCccEEEeccccCCCCCH-------HHHHHHHHHhcCCC-cEEEEEec
Q 016921 220 QPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPA-GTIIIVTW 264 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~-------~~~l~~~~r~Lkpg-G~l~~~~~ 264 (380)
..+++++||+|++..+.. .... ..+++.+.++|+|| |.+++-.|
T Consensus 134 ~~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 134 HRLEPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp TTSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred hhcCCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 566788999999976555 3221 13568889999999 99999664
No 281
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.65 E-value=1.2e-07 Score=85.97 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=82.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--C--CCCCeEEEEcCCCCC-CCCCCCccEEEe
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAAR--G--LADKVSFQVGDALQQ-PFPDGQFDLVWS 232 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~--~--~~~~v~~~~~d~~~~-~~~~~~fD~V~~ 232 (380)
+.+||=||.|.|..+..+++.. ..+|+.+|+++.+++.+++.+... + -.++++++.+|+... .-..++||+|+.
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~ 163 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEE
Confidence 7899999999999999999865 579999999999999999987542 1 136899999999875 334578999997
Q ss_pred ccccCCC-C---CHHHHHHHHHHhcCCCcEEEEEe
Q 016921 233 MESGEHM-P---DKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 233 ~~~l~~~-~---~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
...=..- . -...+++.+++.|+|||+++...
T Consensus 164 D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 164 DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp SCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred eCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 4321111 1 12578999999999999999864
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.60 E-value=1.2e-07 Score=94.12 Aligned_cols=104 Identities=19% Similarity=0.210 Sum_probs=79.9
Q ss_pred CEEEEECCCcChHHHHHHHHc----------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-C
Q 016921 160 KNVVDVGCGIGGSSRYLAKKF----------------GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-F 222 (380)
Q Consensus 160 ~~vLDiGcGtG~~~~~l~~~~----------------~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~ 222 (380)
.+|||.+||+|.+...+++.. ...++|+|+++.++..|+.++...|+..++.+.++|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 499999999999988876532 35899999999999999999888887666555888876543 4
Q ss_pred CCCCccEEEeccccCC-------------------------CC---C-HHHHHHHHHHhcCCCcEEEEEe
Q 016921 223 PDGQFDLVWSMESGEH-------------------------MP---D-KSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 223 ~~~~fD~V~~~~~l~~-------------------------~~---~-~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
++.+||+|+++=-+.. ++ + .-.+++.+.+.|+|||++.+..
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 5679999998522211 11 1 1268999999999999988876
No 283
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.59 E-value=5.2e-07 Score=89.27 Aligned_cols=107 Identities=17% Similarity=0.111 Sum_probs=84.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCC--C-CCCCCccE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF----GAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQ--P-FPDGQFDL 229 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~----~~~v~giD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~--~-~~~~~fD~ 229 (380)
++.+|||.+||+|.+...+++.. ...++|+|+++.+...|+.++...|+. .++.+.++|.... | .+..+||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 47899999999999999888874 468999999999999999998878774 4688999998765 3 34678999
Q ss_pred EEecc--ccCC-----------------CC---C-HHHHHHHHHHhcC-CCcEEEEEec
Q 016921 230 VWSME--SGEH-----------------MP---D-KSKFVSELARVTA-PAGTIIIVTW 264 (380)
Q Consensus 230 V~~~~--~l~~-----------------~~---~-~~~~l~~~~r~Lk-pgG~l~~~~~ 264 (380)
|+++= ...+ ++ + .-.+++.+.+.|+ |||++.+...
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 99851 1110 11 1 1258999999999 9999888763
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.47 E-value=1.2e-06 Score=81.44 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=68.3
Q ss_pred CCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
.++.+|||+||++|.|+..++++ +..|++||+.+-. ... . . .++|.++++|+.....+.++||+|+|..+.
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~l~-~~l----~--~-~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGPMA-QSL----M--D-TGQVTWLREDGFKFRPTRSNISWMVCDMVE 280 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSCCC-HHH----H--T-TTCEEEECSCTTTCCCCSSCEEEEEECCSS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhhcC-hhh----c--c-CCCeEEEeCccccccCCCCCcCEEEEcCCC
Confidence 35999999999999999999987 8899999986421 111 1 1 258999999999887667889999986543
Q ss_pred CCCCCHHHHHHHHHHhcCCC---cEEEEEe
Q 016921 237 EHMPDKSKFVSELARVTAPA---GTIIIVT 263 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~Lkpg---G~l~~~~ 263 (380)
.+..++..+.+.|..| +.++...
T Consensus 281 ----~p~~~~~l~~~wl~~~~~~~aI~~lK 306 (375)
T 4auk_A 281 ----KPAKVAALMAQWLVNGWCRETIFNLK 306 (375)
T ss_dssp ----CHHHHHHHHHHHHHTTSCSEEEEEEE
T ss_pred ----ChHHhHHHHHHHHhccccceEEEEEE
Confidence 4555555555555544 5444443
No 285
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.46 E-value=4.6e-07 Score=81.92 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=81.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc------CCEEEEEeCCHH--------------------------HHHHHHHHHHHcCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF------GAKCQGITLSPV--------------------------QAQRANALAAARGL 206 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~------~~~v~giD~s~~--------------------------~~~~a~~~~~~~~~ 206 (380)
+.+|||+|+..|..+..++... +.+|+++|..+. .++.+++++++.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 6799999999999998887653 568999996421 46778999999998
Q ss_pred C-CCeEEEEcCCCC-CC-CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 207 A-DKVSFQVGDALQ-QP-FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 207 ~-~~v~~~~~d~~~-~~-~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
. ++++++.+|+.+ ++ ++.++||+|++-.-. .......++.+...|+|||++++-++
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 4 899999999866 33 445789999987532 12345789999999999999888664
No 286
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.37 E-value=7.5e-07 Score=79.70 Aligned_cols=84 Identities=18% Similarity=0.228 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
+++.+++.+.+++ +..+||.+||.|..+..++++ +.+|+|+|.++.+++.|++ +.. +++.++++++.++
T Consensus 10 Ll~e~le~L~~~~-----gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l 78 (285)
T 1wg8_A 10 LYQEALDLLAVRP-----GGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHL 78 (285)
T ss_dssp THHHHHHHHTCCT-----TCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGH
T ss_pred HHHHHHHhhCCCC-----CCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchH
Confidence 4667777776654 889999999999999999998 8899999999999999988 532 4899999999886
Q ss_pred C-----CCCCCccEEEeccc
Q 016921 221 P-----FPDGQFDLVWSMES 235 (380)
Q Consensus 221 ~-----~~~~~fD~V~~~~~ 235 (380)
+ ...+++|.|++...
T Consensus 79 ~~~L~~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLG 98 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHcCCCCcCEEEeCCc
Confidence 3 22367999997543
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.35 E-value=2.2e-07 Score=82.67 Aligned_cols=115 Identities=17% Similarity=0.027 Sum_probs=73.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
.+.++.++..+. ++.+|||||||.|.|+..++++. ...|+|+|++..+...+... .....++.....+..-
T Consensus 78 KL~ei~eK~~Lk-----~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~---~~~g~~ii~~~~~~dv 149 (282)
T 3gcz_A 78 KLRWMEERGYVK-----PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR---TTLGWNLIRFKDKTDV 149 (282)
T ss_dssp HHHHHHHTTSCC-----CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC---CBTTGGGEEEECSCCG
T ss_pred HHHHHHHhcCCC-----CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc---ccCCCceEEeeCCcch
Confidence 445555554444 48899999999999999988754 34789999986532211100 0001133334433332
Q ss_pred CCCCCCCccEEEeccccCCCCCH-------HHHHHHHHHhcCCC--cEEEEEec
Q 016921 220 QPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPA--GTIIIVTW 264 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~-------~~~l~~~~r~Lkpg--G~l~~~~~ 264 (380)
..++.+++|+|+|..+.. .... ..+++-+.++|+|| |.+++-.|
T Consensus 150 ~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 150 FNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp GGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEES
T ss_pred hhcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 345578999999977665 4321 13577788999999 99999765
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.17 E-value=7.2e-06 Score=83.26 Aligned_cols=106 Identities=8% Similarity=0.014 Sum_probs=74.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC----CEEEEEeCCHHHHHHHHHH--HHH----cCCCCCeEEEEcCCCCC-CCCCCC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFG----AKCQGITLSPVQAQRANAL--AAA----RGLADKVSFQVGDALQQ-PFPDGQ 226 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~----~~v~giD~s~~~~~~a~~~--~~~----~~~~~~v~~~~~d~~~~-~~~~~~ 226 (380)
++.+|||.|||+|.++..+++..+ .+++|+|+++.+++.|+.+ +.. .+. ....+...|+... +...++
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi-~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSN-NAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTT-BCCEEECCCGGGCCGGGGTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCC-CcceEEecchhcccccccCC
Confidence 478999999999999999988653 4799999999999998433 322 122 1235556666553 223578
Q ss_pred ccEEEeccccCC--CC--------------------------C-HHHHHHHHHHhcCCCcEEEEEec
Q 016921 227 FDLVWSMESGEH--MP--------------------------D-KSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 227 fD~V~~~~~l~~--~~--------------------------~-~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
||+|+++=-... -. + ...+++.+.+.|+|||++.+...
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 999998532211 00 1 23467889999999999998763
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.16 E-value=3.5e-06 Score=75.46 Aligned_cols=116 Identities=17% Similarity=0.160 Sum_probs=71.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ 219 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 219 (380)
.+.++.+. .+- .++.+||||||++|.|+..+++..+ ..|+|+|+...+...... . .....++.....+..-
T Consensus 69 KL~ei~ek-~l~----~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~--~~~~~~iv~~~~~~di 140 (300)
T 3eld_A 69 KIRWLHER-GYL----RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-M--QTLGWNIVKFKDKSNV 140 (300)
T ss_dssp HHHHHHHH-TSC----CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-C--CBTTGGGEEEECSCCT
T ss_pred HHHHHHHh-CCC----CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-c--cccCCceEEeecCcee
Confidence 44455555 432 2589999999999999999998643 478899997542110000 0 0000123333333222
Q ss_pred CCCCCCCccEEEeccccCCCCCH-------HHHHHHHHHhcCCC-cEEEEEecc
Q 016921 220 QPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPA-GTIIIVTWC 265 (380)
Q Consensus 220 ~~~~~~~fD~V~~~~~l~~~~~~-------~~~l~~~~r~Lkpg-G~l~~~~~~ 265 (380)
..+..+.+|+|++..+-. .... ..++.-+.++|+|| |.+++-.|.
T Consensus 141 ~~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 141 FTMPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp TTSCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred eecCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 234568999999966555 3322 24577788999999 999997653
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.15 E-value=1.1e-06 Score=70.37 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=64.0
Q ss_pred CCEEEEECCCcC-hHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCC-CCccEEEecccc
Q 016921 159 PKNVVDVGCGIG-GSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPD-GQFDLVWSMESG 236 (380)
Q Consensus 159 ~~~vLDiGcGtG-~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~fD~V~~~~~l 236 (380)
+.+|||||||.| ..+..|+++.+..|+++|+++..+ .+++.|+.+..... +.||+|++..-
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av----------------~~v~dDiF~P~~~~Y~~~DLIYsirP- 98 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHG----------------GIVRDDITSPRMEIYRGAALIYSIRP- 98 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSST----------------TEECCCSSSCCHHHHTTEEEEEEESC-
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCcccc----------------ceEEccCCCCcccccCCcCEEEEcCC-
Confidence 679999999999 699999985599999999998543 28899998743211 48999977542
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEeccC
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTWCH 266 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 266 (380)
-++.+..+.++++. -|.-+++..++.
T Consensus 99 --P~El~~~i~~lA~~--v~adliI~pL~~ 124 (153)
T 2k4m_A 99 --PAEIHSSLMRVADA--VGARLIIKPLTG 124 (153)
T ss_dssp --CTTTHHHHHHHHHH--HTCEEEEECBTT
T ss_pred --CHHHHHHHHHHHHH--cCCCEEEEcCCC
Confidence 24556666666664 367788876543
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.13 E-value=5.7e-06 Score=77.43 Aligned_cols=108 Identities=18% Similarity=0.163 Sum_probs=82.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCC-----CCeEEEEcCCCCCC-CCCCCccEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLA-----DKVSFQVGDALQQP-FPDGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~~~~-~~~~~fD~V 230 (380)
++.+|||+.+|.|.=+..+++.. +..|+++|+++.-+...++++...+.. .++.+...|+..++ ...+.||.|
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~V 227 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRV 227 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEE
Confidence 49999999999999999998864 357999999999999999988776542 47888888987753 345789999
Q ss_pred Eec----c----ccCCCCC------H----------HHHHHHHHHhcCCCcEEEEEecc
Q 016921 231 WSM----E----SGEHMPD------K----------SKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 231 ~~~----~----~l~~~~~------~----------~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
++. . ++..-++ . .++|..+.+.|||||+|+-++-+
T Consensus 228 LlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 228 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp EEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred EECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 952 2 1111111 0 25788899999999999988743
No 292
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.05 E-value=1.3e-05 Score=71.45 Aligned_cols=115 Identities=17% Similarity=0.277 Sum_probs=76.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-CCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVG-DAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~ 218 (380)
.+..+.+...+. ++.+||||||++|.|+..++...+ ..|+|+|+...-.+.-+ .....++ .-|.|... |+.
T Consensus 82 KL~ei~~~~~l~-----~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w-~lV~~~~~~Dv~ 154 (321)
T 3lkz_A 82 KLRWLVERRFLE-----PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGW-NIVTMKSGVDVF 154 (321)
T ss_dssp HHHHHHHTTSCC-----CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTG-GGEEEECSCCTT
T ss_pred HHHHHHHhcCCC-----CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCC-cceEEEeccCHh
Confidence 455555554454 388999999999999998887764 46999999765110000 0000111 23778877 877
Q ss_pred CCCCCCCCccEEEeccccCCCCCHH-------HHHHHHHHhcCCC-cEEEEEecc
Q 016921 219 QQPFPDGQFDLVWSMESGEHMPDKS-------KFVSELARVTAPA-GTIIIVTWC 265 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~~-------~~l~~~~r~Lkpg-G~l~~~~~~ 265 (380)
.++ ..++|+|+|.-+ +--+++. .+|+-+.+.|++| |.++|-.+.
T Consensus 155 ~l~--~~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 155 YRP--SECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp SSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred hCC--CCCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 765 367999998766 5545432 3677778999999 888886543
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.05 E-value=4e-06 Score=78.35 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=78.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--C-C----CCCeEEEEcCCCCCC----CCCCC
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR--G-L----ADKVSFQVGDALQQP----FPDGQ 226 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~--~-~----~~~v~~~~~d~~~~~----~~~~~ 226 (380)
++.+||=||.|.|..+..+++....+|+.+|+++.+++.+++.+... + . .++++++.+|+...- -..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 46899999999999999998865678999999999999999875321 1 1 146899999986531 12468
Q ss_pred ccEEEeccccCCC-CC---------HHHHHHHHHHhcCCCcEEEEEe
Q 016921 227 FDLVWSMESGEHM-PD---------KSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 227 fD~V~~~~~l~~~-~~---------~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
||+|+....-... .+ ...+++.++++|+|||+++...
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9999975321111 11 1467889999999999988753
No 294
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.98 E-value=0.0001 Score=68.44 Aligned_cols=150 Identities=15% Similarity=0.055 Sum_probs=102.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC--------------------CCCCeEEEEcCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARG--------------------LADKVSFQVGDA 217 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~--------------------~~~~v~~~~~d~ 217 (380)
...|+.+|||.......+.... +..++-||. |+.++.-++.+.+.+ .+++..++.+|+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 5789999999999999998763 567778888 888888777776642 136789999999
Q ss_pred CCCC--------C-CCCCccEEEeccccCCCCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHH
Q 016921 218 LQQP--------F-PDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKK 286 (380)
Q Consensus 218 ~~~~--------~-~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (380)
.+.. . ..+...++++-.++.+++. ..++++.+.+.. |+|.+++.+...... + ...+...+...+..
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~-~-~~~fg~~m~~~l~~ 253 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQ-P-NDRFGAIMQSNLKE 253 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCS-T-TCCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCC-C-cchHHHHHHHHhhc
Confidence 8742 1 2356778888889999853 467888888876 788887777544311 1 12222222222322
Q ss_pred -Hhhc-cCCCCCCCHHHHHHHHHhCCCc
Q 016921 287 -ICDA-YYLPAWCSTADYVKLLQSLSLE 312 (380)
Q Consensus 287 -~~~~-~~~~~~~~~~~~~~ll~~aGf~ 312 (380)
.... .....+.++++..+.|.++||.
T Consensus 254 ~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 254 SRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred ccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 1111 1222356899999999999997
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.95 E-value=8.6e-05 Score=64.04 Aligned_cols=114 Identities=18% Similarity=0.205 Sum_probs=75.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-CCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVG-DAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~ 218 (380)
.+..+.+...++ ++.+||||||++|.|+..++...+ ..|+|+|+-..-.+.- ......|+ +.+.|.++ |+.
T Consensus 66 KL~ei~ek~~l~-----~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gw-n~v~fk~gvDv~ 138 (267)
T 3p8z_A 66 KLQWFVERNMVI-----PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGW-NIVKLMSGKDVF 138 (267)
T ss_dssp HHHHHHHTTSSC-----CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTT-TSEEEECSCCGG
T ss_pred HHHHHHHhcCCC-----CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCc-CceEEEecccee
Confidence 455566655554 488999999999999998888764 5799999976422100 00011233 46899999 976
Q ss_pred CCCCCCCCccEEEeccccCCCCCH-------HHHHHHHHHhcCCCcEEEEEecc
Q 016921 219 QQPFPDGQFDLVWSMESGEHMPDK-------SKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~-------~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
.++ ..++|.|+|.-+= --+++ -.+|+-+.+.|++ |.++|-.+.
T Consensus 139 ~~~--~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 139 YLP--PEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp GCC--CCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred ecC--CccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 654 3779999985433 22332 2366777889998 777775543
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.88 E-value=5.2e-05 Score=69.34 Aligned_cols=58 Identities=26% Similarity=0.239 Sum_probs=49.4
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAAR 204 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~ 204 (380)
.+++.++.... . ++..|||++||+|..+..+++. +.+++|+|+++.+++.|++++...
T Consensus 223 ~l~~~~i~~~~-~-----~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFS-F-----VGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHC-C-----TTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-C-----CCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 46677776654 2 3889999999999999998875 899999999999999999998764
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.85 E-value=0.00023 Score=70.33 Aligned_cols=118 Identities=14% Similarity=0.162 Sum_probs=83.2
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHHHHHcCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--------------GAKCQGITLSPVQAQRANALAAARGL 206 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--------------~~~v~giD~s~~~~~~a~~~~~~~~~ 206 (380)
+++.+++.+.... +.+|+|-+||+|.+...+.+.. ...++|+|+++.+...|+.+..-.|.
T Consensus 205 Vv~lmv~l~~p~~-----~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~ 279 (530)
T 3ufb_A 205 VVRFMVEVMDPQL-----GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL 279 (530)
T ss_dssp HHHHHHHHHCCCT-----TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhccCC-----CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC
Confidence 4555555555443 7899999999999998776543 24699999999999999988777776
Q ss_pred CCCeEEEEcCCCCCCC----CCCCccEEEeccccCC---------C------CCH-HHHHHHHHHhcC-------CCcEE
Q 016921 207 ADKVSFQVGDALQQPF----PDGQFDLVWSMESGEH---------M------PDK-SKFVSELARVTA-------PAGTI 259 (380)
Q Consensus 207 ~~~v~~~~~d~~~~~~----~~~~fD~V~~~~~l~~---------~------~~~-~~~l~~~~r~Lk-------pgG~l 259 (380)
. ...+..+|....+. +..+||+|+++=-+.- + .+. ..+++.+.+.|| |||++
T Consensus 280 ~-~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~ 358 (530)
T 3ufb_A 280 E-YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRA 358 (530)
T ss_dssp S-CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEE
T ss_pred c-cccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceE
Confidence 3 45677888765442 2357999998633311 1 111 246788888887 69998
Q ss_pred EEEec
Q 016921 260 IIVTW 264 (380)
Q Consensus 260 ~~~~~ 264 (380)
.+...
T Consensus 359 avVlP 363 (530)
T 3ufb_A 359 AVVVP 363 (530)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88764
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.84 E-value=3.5e-05 Score=67.48 Aligned_cols=110 Identities=19% Similarity=0.218 Sum_probs=67.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcC-CEEEEEeCCHH--HHHHHHHHHHHcCCCCCe---EEEE
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFG-AKCQGITLSPV--QAQRANALAAARGLADKV---SFQV 214 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~giD~s~~--~~~~a~~~~~~~~~~~~v---~~~~ 214 (380)
.+.++.++.-++ ++.+|||+||+.|.|+..+++..+ ..|.|.++... .... ...+.++ .|.+
T Consensus 61 KL~EIdeK~lik-----pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~-------~~~~~Gv~~i~~~~ 128 (269)
T 2px2_A 61 KLRWLVERRFVQ-----PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPM-------LMQSYGWNIVTMKS 128 (269)
T ss_dssp HHHHHHHTTSCC-----CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCC-------CCCSTTGGGEEEEC
T ss_pred HHHHHHHcCCCC-----CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCC-------cccCCCceEEEeec
Confidence 444455443333 599999999999999999998621 13344443322 1000 0011233 4555
Q ss_pred c-CCCCCCCCCCCccEEEeccccCCCCCH----H---HHHHHHHHhcCCCc-EEEEEecc
Q 016921 215 G-DALQQPFPDGQFDLVWSMESGEHMPDK----S---KFVSELARVTAPAG-TIIIVTWC 265 (380)
Q Consensus 215 ~-d~~~~~~~~~~fD~V~~~~~l~~~~~~----~---~~l~~~~r~LkpgG-~l~~~~~~ 265 (380)
+ |+.+++ ..++|+|+|..+-. -..+ . .++.-+.++|+||| .+++=.|.
T Consensus 129 G~Df~~~~--~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 129 GVDVFYKP--SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp SCCGGGSC--CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cCCccCCC--CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 7 988753 56899999865443 3222 1 25677779999999 88886653
No 299
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.81 E-value=2.9e-06 Score=97.67 Aligned_cols=146 Identities=16% Similarity=0.104 Sum_probs=72.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCCccEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFG------AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~------~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V 230 (380)
+..+|||||.|+|..+..+.+.++ .+++..|+|+...+.++++++.. .++....|..+. ++...+||+|
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydlv 1315 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADLL 1315 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeEE
Confidence 467999999999988777666542 37899999998888888776542 243333344332 3345679999
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCC
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLS 310 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 310 (380)
++..++|..++....+++++++|||||++++.+....... .....+ +... .. ....+.+.++|.++|+++|
T Consensus 1316 ia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~---g~~~~~----~~~~-~r-~~~~~~~~~~w~~~l~~~g 1386 (2512)
T 2vz8_A 1316 VCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPL---GEMVGF----LTSP-EQ-GGRHLLSQDQWESLFAGAS 1386 (2512)
T ss_dssp EEECC--------------------CCEEEEEEC-----------------------------------CTTTTSSTTTT
T ss_pred EEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccccc---cccccc----cccc-cc-cCCcccCHHHHHHHHHhCC
Confidence 9999998888889999999999999999999874321000 000000 0000 00 0012356678888899999
Q ss_pred CcEEEE
Q 016921 311 LEDIKA 316 (380)
Q Consensus 311 f~~v~~ 316 (380)
|..+..
T Consensus 1387 f~~~~~ 1392 (2512)
T 2vz8_A 1387 LHLVAL 1392 (2512)
T ss_dssp EEEEEE
T ss_pred Cceeee
Confidence 988765
No 300
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.59 E-value=0.00074 Score=61.88 Aligned_cols=147 Identities=15% Similarity=0.057 Sum_probs=96.4
Q ss_pred CEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC--CCCCeEEEEcCCCCCC---------CCCCCcc
Q 016921 160 KNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG--LADKVSFQVGDALQQP---------FPDGQFD 228 (380)
Q Consensus 160 ~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~---------~~~~~fD 228 (380)
..||+||||-=..+..+....+..|+-+| .|..++..++.+.+.+ ...+..++.+|+.+ . +..+..=
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 46999999987776666521157899999 5999999999887643 24578899999986 2 2223445
Q ss_pred EEEeccccCCCCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccc-hHHHHHHHHHhhcc---------CCCCC
Q 016921 229 LVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQ-PWEQELLKKICDAY---------YLPAW 296 (380)
Q Consensus 229 ~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~ 296 (380)
++++-++++|+++ ...+++.+...+.||+.|++....... ... ......+....... .+...
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 255 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHG------DEWREQMQLRFRRVSDALGFEQAVDVQELIYH 255 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTC------SHHHHHHHHHHHHHHC-----------CCTTC
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCC------cchhHHHHHHHHHHHHHcCCcCCCCccccccC
Confidence 6777788888864 467888999988899988886543211 111 01111120111111 11112
Q ss_pred CC-HHHHHHHHHhCCCcEE
Q 016921 297 CS-TADYVKLLQSLSLEDI 314 (380)
Q Consensus 297 ~~-~~~~~~ll~~aGf~~v 314 (380)
.+ .++..++|.+.||+.+
T Consensus 256 ~~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 256 DENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp CTTCCCHHHHHTTTTEEEE
T ss_pred CCChHHHHHHHHHCcCccc
Confidence 35 7899999999999987
No 301
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.50 E-value=9.4e-05 Score=67.74 Aligned_cols=87 Identities=16% Similarity=0.125 Sum_probs=68.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
+++++++.+.+++ +..++|..||.|..+..+++.. ..+|+|+|.++.+++.++ ++ ...++.++++++.
T Consensus 45 Ll~Evl~~L~i~p-----ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~ 114 (347)
T 3tka_A 45 LLDEAVNGLNIRP-----DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFS 114 (347)
T ss_dssp TTHHHHHHTCCCT-----TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGG
T ss_pred cHHHHHHhhCCCC-----CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHH
Confidence 5677788877654 8999999999999999999876 479999999999999884 33 1368999999988
Q ss_pred CCC-----CC-CCCccEEEeccccC
Q 016921 219 QQP-----FP-DGQFDLVWSMESGE 237 (380)
Q Consensus 219 ~~~-----~~-~~~fD~V~~~~~l~ 237 (380)
++. .. .+++|.|+....+.
T Consensus 115 ~l~~~L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 115 ALGEYVAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp GHHHHHHHTTCTTCEEEEEEECSCC
T ss_pred HHHHHHHhcCCCCcccEEEECCccC
Confidence 752 11 13699999865553
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.30 E-value=0.00081 Score=61.01 Aligned_cols=127 Identities=15% Similarity=0.131 Sum_probs=78.6
Q ss_pred CCEEEEECCCcChHHHHHHHH---c--CC--EEEEEeCCH--------H-HHHHHHHHHHHcC--CCCC--eEEEEcCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKK---F--GA--KCQGITLSP--------V-QAQRANALAAARG--LADK--VSFQVGDAL 218 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~---~--~~--~v~giD~s~--------~-~~~~a~~~~~~~~--~~~~--v~~~~~d~~ 218 (380)
.-+|||+|-|||.+.....+. . .. +++.+|..+ . ..+..+....... ...+ +.+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 568999999999976554332 1 23 456666421 1 1122222222210 0123 467788876
Q ss_pred CC-C-CCCCCccEEEeccccCCCCCH----HHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhccC
Q 016921 219 QQ-P-FPDGQFDLVWSMESGEHMPDK----SKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDAYY 292 (380)
Q Consensus 219 ~~-~-~~~~~fD~V~~~~~l~~~~~~----~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (380)
+. + +++..||+|+... +.--.+| ..+++.++++++|||.|.- ++
T Consensus 177 ~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Yt--------------------------- 226 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVS--YS--------------------------- 226 (308)
T ss_dssp HHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SC---------------------------
T ss_pred HHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEE--Ee---------------------------
Confidence 52 2 4456899998754 3222233 6899999999999998764 21
Q ss_pred CCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 016921 293 LPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 293 ~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
....++..|+++||++.....+.
T Consensus 227 -----aag~VRR~L~~aGF~V~k~~G~g 249 (308)
T 3vyw_A 227 -----SSLSVRKSLLTLGFKVGSSREIG 249 (308)
T ss_dssp -----CCHHHHHHHHHTTCEEEEEECC-
T ss_pred -----CcHHHHHHHHHCCCEEEecCCCC
Confidence 23567889999999998887654
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.24 E-value=0.001 Score=61.98 Aligned_cols=77 Identities=12% Similarity=0.086 Sum_probs=59.6
Q ss_pred HHHHHHHHHcCCCCC-CCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC
Q 016921 140 RMIEETLRFAGVSED-PTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~-~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 217 (380)
.+++++++.+++... ...++..|||||.|.|.++..|++.. ..+|+++++++..+...++.. . .++++++.+|+
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~ 114 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDP 114 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCT
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCc
Confidence 466777777765420 00136899999999999999999864 568999999999998888766 2 25899999999
Q ss_pred CCC
Q 016921 218 LQQ 220 (380)
Q Consensus 218 ~~~ 220 (380)
.++
T Consensus 115 l~~ 117 (353)
T 1i4w_A 115 YDW 117 (353)
T ss_dssp TCH
T ss_pred cch
Confidence 654
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.23 E-value=0.00082 Score=60.03 Aligned_cols=59 Identities=20% Similarity=0.223 Sum_probs=48.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG 205 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~ 205 (380)
.+++.++.... . ++..|||..||+|..+....+. +.+++|+|+++.+++.+++++...+
T Consensus 200 ~l~~~~i~~~~-~-----~~~~vlD~f~GsGtt~~~a~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASS-N-----PNDLVLDCFMGSGTTAIVAKKL-GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHC-C-----TTCEEEESSCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-C-----CCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 46666666653 2 4889999999999999988775 8999999999999999999986543
No 305
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.18 E-value=0.027 Score=51.97 Aligned_cols=154 Identities=13% Similarity=0.020 Sum_probs=96.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC----------------------CCCCeEEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARG----------------------LADKVSFQV 214 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~----------------------~~~~v~~~~ 214 (380)
...|+-+|||.=.....+.... +..++=||. |+.++.=++.+...+ .+.+..++.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 5689999999988888887642 567788887 555554444443210 146788999
Q ss_pred cCCCCC----------CCCCCCccEEEeccccCCCCC--HHHHHHHHHHhcCCCcEEEEEeccCCCCCCCccccchHHHH
Q 016921 215 GDALQQ----------PFPDGQFDLVWSMESGEHMPD--KSKFVSELARVTAPAGTIIIVTWCHRDLAPSEESLQPWEQE 282 (380)
Q Consensus 215 ~d~~~~----------~~~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 282 (380)
+|+.+. .+..+..=++++-+++.+++. ..++++.+.+.. |+|.+++.+...+. ..+...+..
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~-----d~fg~~M~~ 243 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMG-----DRFGQIMIE 243 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTT-----SHHHHHHHH
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCC-----CHHHHHHHH
Confidence 998773 133445567777788888853 467888888766 56666666754221 122222222
Q ss_pred HHHHHhhc-cCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 016921 283 LLKKICDA-YYLPAWCSTADYVKLLQSLSLEDIKAEDW 319 (380)
Q Consensus 283 ~~~~~~~~-~~~~~~~~~~~~~~ll~~aGf~~v~~~~~ 319 (380)
.+...... ..+..+.++++..+.+.++||+.++..+.
T Consensus 244 ~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 244 NLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 22221111 11113467899999999999998876543
No 306
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.17 E-value=0.0019 Score=57.55 Aligned_cols=92 Identities=17% Similarity=0.183 Sum_probs=61.4
Q ss_pred CCCCEEEEECC------CcChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCcc
Q 016921 157 KRPKNVVDVGC------GIGGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFD 228 (380)
Q Consensus 157 ~~~~~vLDiGc------GtG~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 228 (380)
+.+.+|||+|+ -.|.+ .+.+.. ++.|+++|+.+-.. . .. .++++|...... .++||
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------d-a~-~~IqGD~~~~~~-~~k~D 171 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------D-AD-STLIGDCATVHT-ANKWD 171 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------S-SS-EEEESCGGGEEE-SSCEE
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------C-CC-eEEEcccccccc-CCCCC
Confidence 44899999997 45553 222222 46999999987321 1 12 559999766432 48899
Q ss_pred EEEecccc---CCC--CC------HHHHHHHHHHhcCCCcEEEEEec
Q 016921 229 LVWSMESG---EHM--PD------KSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l---~~~--~~------~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|++-.+- .+. .. .+.++.-+.++|+|||.|++=.|
T Consensus 172 LVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 172 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp EEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 99984322 121 11 25677778899999999999765
No 307
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.48 E-value=0.013 Score=55.54 Aligned_cols=98 Identities=16% Similarity=0.035 Sum_probs=66.3
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C------CCCCCcc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P------FPDGQFD 228 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~------~~~~~fD 228 (380)
++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++ .| ..++..+-.+. . .....+|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG----a~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AG----FETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TT----CEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC----CcEEcCCCcchHHHHHHHHhCCCCCC
Confidence 489999999986 8888888887788 99999999998887753 23 23332221111 0 0123699
Q ss_pred EEEeccccCCC--------CCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 229 LVWSMESGEHM--------PDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 229 ~V~~~~~l~~~--------~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+|+-.-.-... .++...++.+.+.|++||++++..
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 99865432210 012357889999999999988754
No 308
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.40 E-value=0.023 Score=53.82 Aligned_cols=99 Identities=21% Similarity=0.158 Sum_probs=68.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC------CCCCCcc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QP------FPDGQFD 228 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~------~~~~~fD 228 (380)
++.+||-+|+|. |..+..+++..|+ .|+++|.+++.++.+++ .|. ..+...-.+ +. .....+|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF----EIADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----EEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC----cEEccCCcchHHHHHHHHhCCCCCC
Confidence 489999999875 8888889988787 79999999998888764 332 223221111 00 1124699
Q ss_pred EEEeccccC---------CCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 229 LVWSMESGE---------HMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l~---------~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+-.-... |.+++...++.+.+.|++||++++...
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 998654321 233455688999999999999987643
No 309
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.20 E-value=0.024 Score=53.02 Aligned_cols=94 Identities=18% Similarity=0.209 Sum_probs=65.3
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----CCCCCCccEE
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~V 230 (380)
++.+||-+|+|. |..+..+++..|+ .|+++|.++..++.+++. |. -.++..+-.++ ....+.+|+|
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga---~~vi~~~~~~~~~~~~~~~~gg~D~v 262 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GA---THVINSKTQDPVAAIKEITDGGVNFA 262 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TC---SEEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CC---CEEecCCccCHHHHHHHhcCCCCcEE
Confidence 489999999985 8888888887787 799999999988887653 32 12222211111 0112379998
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+-... ....++.+.+.|++||++++...
T Consensus 263 id~~g------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 263 LESTG------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EECSC------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred EECCC------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 75432 13568899999999999988653
No 310
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.98 E-value=0.023 Score=47.90 Aligned_cols=90 Identities=18% Similarity=0.193 Sum_probs=60.4
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCCc
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (380)
++.+||.+|+ |.|..+..++...|++|+++|.+++.++.+++ .+. .. .. |..+.. .....+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~--~~-~~--d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGV--EY-VG--DSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCC--SE-EE--ETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC--CE-Ee--eCCcHHHHHHHHHHhCCCCC
Confidence 4899999994 45666666666558999999999987766543 232 11 12 332211 122469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
|+|+.... ...++.+.+.|++||++++..
T Consensus 109 D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSLA-------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECCC-------THHHHHHHHTEEEEEEEEECS
T ss_pred eEEEECCc-------hHHHHHHHHHhccCCEEEEEc
Confidence 99986432 246889999999999988864
No 311
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.62 E-value=0.05 Score=50.40 Aligned_cols=90 Identities=20% Similarity=0.212 Sum_probs=64.8
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++ .|. . .++ .+...+ . +.+|+|+-...-
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa--~-~v~-~~~~~~--~-~~~D~vid~~g~ 244 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGV--K-HFY-TDPKQC--K-EELDFIISTIPT 244 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTC--S-EEE-SSGGGC--C-SCEEEEEECCCS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCC--C-eec-CCHHHH--h-cCCCEEEECCCc
Confidence 489999999985 888888888779999999999988887764 332 1 222 333322 2 279998854332
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
. ..++.+.+.|++||++++...
T Consensus 245 ~------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 245 H------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp C------CCHHHHHTTEEEEEEEEECCC
T ss_pred H------HHHHHHHHHHhcCCEEEEECC
Confidence 1 247788899999999998753
No 312
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.60 E-value=0.0054 Score=54.85 Aligned_cols=101 Identities=12% Similarity=-0.000 Sum_probs=75.8
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-C---CCCCCCccEEEecc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q---PFPDGQFDLVWSME 234 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~---~~~~~~fD~V~~~~ 234 (380)
+..+||+=+|+|.+++.+... +.+++.+|.++...+..++++.. ..+++++..|... + .-+..+||+|++.=
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 566999999999999999885 68999999999999888877643 3579999999654 1 12345799999864
Q ss_pred ccCCCCCHHHHHHHHHH--hcCCCcEEEEEe
Q 016921 235 SGEHMPDKSKFVSELAR--VTAPAGTIIIVT 263 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r--~LkpgG~l~~~~ 263 (380)
-.+.-.+..++++.+.+ .+.|+|.+++=-
T Consensus 168 PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WY 198 (283)
T 2oo3_A 168 SYERKEEYKEIPYAIKNAYSKFSTGLYCVWY 198 (283)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHhCccCCCeEEEEEE
Confidence 44433456677766665 456899888843
No 313
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.60 E-value=0.03 Score=57.02 Aligned_cols=126 Identities=21% Similarity=0.230 Sum_probs=81.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc-------------CCEEEEEeC---CHHHHHHHH-----------HHHHHcCC-----
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-------------GAKCQGITL---SPVQAQRAN-----------ALAAARGL----- 206 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-------------~~~v~giD~---s~~~~~~a~-----------~~~~~~~~----- 206 (380)
.-+|+|+|.|+|.+.+.+.+.+ ..+++.++. +.+.+..+- +.......
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 5799999999999888876643 146899998 555555432 22222110
Q ss_pred -----C---CCeEEEEcCCCCC-C-CC---CCCccEEEeccccCCC-CC--HHHHHHHHHHhcCCCcEEEEEeccCCCCC
Q 016921 207 -----A---DKVSFQVGDALQQ-P-FP---DGQFDLVWSMESGEHM-PD--KSKFVSELARVTAPAGTIIIVTWCHRDLA 270 (380)
Q Consensus 207 -----~---~~v~~~~~d~~~~-~-~~---~~~fD~V~~~~~l~~~-~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~ 270 (380)
. -.+.+..+|+.+. + +. +..+|+++....--.. ++ ...++..+.++++|||.+.-..
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------- 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------- 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC-------
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc-------
Confidence 0 1356677777542 2 22 4689999875422221 22 1689999999999999865421
Q ss_pred CCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 016921 271 PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (380)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 318 (380)
....+++.|+++||.+.....
T Consensus 212 ---------------------------~~~~vr~~l~~aGf~~~~~~~ 232 (689)
T 3pvc_A 212 ---------------------------AAGFVRRGLQQAGFNVTKVKG 232 (689)
T ss_dssp ---------------------------CCHHHHHHHHHTTCEEEEEEC
T ss_pred ---------------------------CcHHHHHHHHhCCeEEEeccC
Confidence 124677889999999877653
No 314
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.58 E-value=0.064 Score=47.38 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=71.8
Q ss_pred CCEEEEECCCcChHHHHHHHH--------cCCEEEEEe-----CCHH-------------------HHHHHHHHH-----
Q 016921 159 PKNVVDVGCGIGGSSRYLAKK--------FGAKCQGIT-----LSPV-------------------QAQRANALA----- 201 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~--------~~~~v~giD-----~s~~-------------------~~~~a~~~~----- 201 (380)
+..|+|+|+-.|..+..++.. ...+|+|+| +.+. ..+..++.+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 678999999999988887652 146899999 3210 011112211
Q ss_pred -HHcCC-CCCeEEEEcCCCCC-C-----CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEecc
Q 016921 202 -AARGL-ADKVSFQVGDALQQ-P-----FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTWC 265 (380)
Q Consensus 202 -~~~~~-~~~v~~~~~d~~~~-~-----~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 265 (380)
...+. .+++.++.+++.+. | .+..+||+|++-.-. .......++.+...|+|||.+++-++.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 12344 47899999998763 2 345679999987632 233456789999999999999997754
No 315
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.54 E-value=0.13 Score=47.59 Aligned_cols=94 Identities=21% Similarity=0.221 Sum_probs=64.3
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCCC------CC---CCC
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQQP------FP---DGQ 226 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~------~~---~~~ 226 (380)
++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++ .|.. .++..+- .+.. .. ...
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHhccccCCC
Confidence 489999999874 778888888778899999999998887764 3421 2222110 1110 11 246
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+|+-... . ...++.+.+.|++||++++...
T Consensus 241 ~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 241 PNVTIDCSG-----N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp CSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 999875432 1 3467889999999999988643
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.52 E-value=0.11 Score=48.46 Aligned_cols=94 Identities=21% Similarity=0.211 Sum_probs=65.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----C---CCCCCc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----P---FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~---~~~~~f 227 (380)
++.+||=+|+|. |..+..+++..|+ .|+++|.++..++.+++. |.. .++...-.++ . ...+.+
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~i~~~~~~~~gg~ 254 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT---ATVDPSAGDVVEAIAGPVGLVPGGV 254 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTSSCHHHHHHSTTSSSTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEECCCCcCHHHHHHhhhhccCCCC
Confidence 389999999874 7888888887787 999999999988877652 321 1221111110 0 223479
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|+-... ....++.+.+.|++||++++...
T Consensus 255 Dvvid~~G------~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 255 DVVIECAG------VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp EEEEECSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CEEEECCC------CHHHHHHHHHHhccCCEEEEEec
Confidence 99885422 13578899999999999988653
No 317
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.52 E-value=0.04 Score=50.83 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=65.3
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC------CCCCccEE
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF------PDGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~V 230 (380)
++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++ .|. -.++ |..+..+ ..+.+|.|
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa---~~~i--~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGA---EVAV--NARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTC---SEEE--ETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCC---CEEE--eCCCcCHHHHHHHhCCCCCEE
Confidence 489999999984 888899998889999999999998887765 332 1222 2222110 01368888
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+-... ....++.+.+.|++||++++...
T Consensus 237 id~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 237 LVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred EEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 75422 24578899999999999988653
No 318
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.43 E-value=0.043 Score=55.80 Aligned_cols=126 Identities=19% Similarity=0.182 Sum_probs=80.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc-----------C--CEEEEEeC---CHHHHHHHHH-----------HHHHcCC--C--
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF-----------G--AKCQGITL---SPVQAQRANA-----------LAAARGL--A-- 207 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~-----------~--~~v~giD~---s~~~~~~a~~-----------~~~~~~~--~-- 207 (380)
.-+|||+|.|+|.+.+...+.+ . .++++++. +.+.+..+-+ ....... +
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 5699999999999887776543 1 36899998 7777763322 2222211 0
Q ss_pred ---------CCeEEEEcCCCCC-C-CC---CCCccEEEeccccCCC-CC--HHHHHHHHHHhcCCCcEEEEEeccCCCCC
Q 016921 208 ---------DKVSFQVGDALQQ-P-FP---DGQFDLVWSMESGEHM-PD--KSKFVSELARVTAPAGTIIIVTWCHRDLA 270 (380)
Q Consensus 208 ---------~~v~~~~~d~~~~-~-~~---~~~fD~V~~~~~l~~~-~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~ 270 (380)
-.+.+..+|+.+. + +. ...||+|+....-... ++ ...+++.++++++|||.+....
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------- 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------- 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC-------
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc-------
Confidence 1234566666542 1 11 4679999875422111 22 1689999999999999866422
Q ss_pred CCccccchHHHHHHHHHhhccCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 016921 271 PSEESLQPWEQELLKKICDAYYLPAWCSTADYVKLLQSLSLEDIKAED 318 (380)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~v~~~~ 318 (380)
....++..|+++||.+.....
T Consensus 220 ---------------------------~~~~vr~~L~~aGf~v~~~~~ 240 (676)
T 3ps9_A 220 ---------------------------SAGFVRRGLQDAGFTMQKRKG 240 (676)
T ss_dssp ---------------------------CCHHHHHHHHHHTCEEEEEEC
T ss_pred ---------------------------CcHHHHHHHHhCCeEEEeccc
Confidence 124677888999998776553
No 319
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.42 E-value=0.11 Score=48.39 Aligned_cols=96 Identities=14% Similarity=0.096 Sum_probs=66.2
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC--CC------CCCCCCc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGAK-CQGITLSPVQAQRANALAAARGLADKVSFQVGDAL--QQ------PFPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~-v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~------~~~~~~f 227 (380)
++.+||=+|+|. |..+..+++..|++ |+++|.+++.++.+++. .. .-+.+...+.. ++ ......+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHHHHhCCCCC
Confidence 388999999874 88888888877886 99999999999988875 21 11222211110 10 0123579
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|+-.-. ....++.+.+.|++||++++...
T Consensus 254 Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 254 AVALECTG------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp SEEEECSC------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred CEEEECCC------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 99885432 13468889999999999998754
No 320
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.39 E-value=0.14 Score=47.43 Aligned_cols=94 Identities=17% Similarity=0.137 Sum_probs=64.3
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC---CCCC-----CCCCCCc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGD---ALQQ-----PFPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~-----~~~~~~f 227 (380)
++.+||-+|+|. |..+..+++..|+ +|+++|.++..++.+++ .|.. .++..+ ..+. ....+.+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~~~~g~ 243 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQLGCKP 243 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHHhCCCC
Confidence 489999999884 8888888887788 99999999988887764 3321 222211 0010 0001469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|+-.-. . ...++.+.+.|++||++++...
T Consensus 244 D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 244 EVTIECTG-----A-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEec
Confidence 99875432 1 3467889999999999988653
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.20 E-value=0.069 Score=49.49 Aligned_cols=94 Identities=16% Similarity=0.061 Sum_probs=64.6
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----C-CCCCCccE
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----P-FPDGQFDL 229 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~~fD~ 229 (380)
++.+||=+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |. ..++..+-.++ . .....+|+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi~~~~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GA---TDIINYKNGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TC---CEEECGGGSCHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CC---ceEEcCCCcCHHHHHHHHcCCCCCCE
Confidence 489999999884 7788888887787 899999999888877653 32 12222111111 0 12346999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+-...- ...++.+.+.|+|||++++...
T Consensus 239 v~d~~g~------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 239 VVIAGGD------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp EEECSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCC------hHHHHHHHHHHhcCCEEEEecc
Confidence 9854321 2468889999999999988654
No 322
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.02 E-value=0.072 Score=50.63 Aligned_cols=63 Identities=17% Similarity=0.150 Sum_probs=49.9
Q ss_pred CCCCEEEEECCCcChHHHHHH-HHcC--CEEEEEeCCHHHHHHHHHHHHH--cCCC-CCeEEEEcCCCC
Q 016921 157 KRPKNVVDVGCGIGGSSRYLA-KKFG--AKCQGITLSPVQAQRANALAAA--RGLA-DKVSFQVGDALQ 219 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~-~~~~--~~v~giD~s~~~~~~a~~~~~~--~~~~-~~v~~~~~d~~~ 219 (380)
.++..|+|||++.|.++..++ ...+ .+|+++|++|...+..+++.+. ++.. +++.++..-+.+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 468999999999999999988 4433 6999999999999999999887 2222 577777655543
No 323
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.99 E-value=0.058 Score=50.31 Aligned_cols=94 Identities=22% Similarity=0.123 Sum_probs=65.6
Q ss_pred CCCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCCccE
Q 016921 157 KRPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (380)
Q Consensus 157 ~~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~ 229 (380)
.++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++. |. -.++..+..++. .....+|+
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga---~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GA---DHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TC---SEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CC---CEEEcCCcccHHHHHHHHhCCCCceE
Confidence 3589999999884 7788888887799999999999988887652 32 122222211110 12347999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+-...- ..++.+.+.|++||++++...
T Consensus 261 vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 261 ILEIAGG-------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EEEETTS-------SCHHHHHHHEEEEEEEEEECC
T ss_pred EEECCCh-------HHHHHHHHHhhcCCEEEEEec
Confidence 8865431 346788899999999998764
No 324
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.95 E-value=0.097 Score=48.02 Aligned_cols=90 Identities=16% Similarity=0.151 Sum_probs=61.8
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CC-------CCCCCc
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QP-------FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-------~~~~~f 227 (380)
++.+||-.|+ |.|..+..++...|++|+++|.+++.++.+++ .|. .. . .|..+ .. ...+.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~--~~-~--~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGF--DA-A--FNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--SE-E--EETTSCSCHHHHHHHHCTTCE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC--cE-E--EecCCHHHHHHHHHHHhCCCC
Confidence 4899999997 46777777777668999999999988877633 232 11 1 23322 11 112479
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
|+|+.... ...++.+.+.|++||++++..
T Consensus 216 d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVG-------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC-------hHHHHHHHHHHhcCCEEEEEe
Confidence 99886543 135788999999999998764
No 325
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.81 E-value=0.11 Score=47.62 Aligned_cols=97 Identities=14% Similarity=0.113 Sum_probs=65.6
Q ss_pred CCEEEEECCCcChHHHHHHHHcC---CEE-EEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCCccEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFG---AKC-QGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~---~~v-~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~ 231 (380)
..+++|+-||.|.+...+.+. | ..+ .++|+++...+..+.+.. .. ++.+|+.++. ++...+|+++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~------~~-~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFK------EE-VQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHC------CC-CBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCC------CC-cccCChhhcCHHHhccCCCCEEE
Confidence 578999999999999998876 4 346 699999999888877762 12 5678888764 2223689998
Q ss_pred eccccCCC-----------CCH-HHHHHHHHH-hcCC---CcEEEEEe
Q 016921 232 SMESGEHM-----------PDK-SKFVSELAR-VTAP---AGTIIIVT 263 (380)
Q Consensus 232 ~~~~l~~~-----------~~~-~~~l~~~~r-~Lkp---gG~l~~~~ 263 (380)
...-...+ .|. ..++.++.+ +++. .-.+++.|
T Consensus 82 ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lE 129 (327)
T 3qv2_A 82 MSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIE 129 (327)
T ss_dssp ECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEE
T ss_pred ecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEE
Confidence 65433332 232 356667777 5542 23456666
No 326
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.79 E-value=0.07 Score=50.07 Aligned_cols=69 Identities=17% Similarity=0.108 Sum_probs=54.0
Q ss_pred CEEEEECCCcChHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---C-----CCCCccEE
Q 016921 160 KNVVDVGCGIGGSSRYLAKKFGAK-CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---F-----PDGQFDLV 230 (380)
Q Consensus 160 ~~vLDiGcGtG~~~~~l~~~~~~~-v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~-----~~~~fD~V 230 (380)
.+|||+-||.|.++..+.+. |.+ +.++|+++...+..+.+. ++..++.+|+.++. + ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999999887 655 669999999888777654 35678889988763 1 24679999
Q ss_pred Eeccc
Q 016921 231 WSMES 235 (380)
Q Consensus 231 ~~~~~ 235 (380)
+..--
T Consensus 76 ~ggpP 80 (376)
T 3g7u_A 76 IGGPP 80 (376)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 97543
No 327
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.77 E-value=0.06 Score=50.36 Aligned_cols=92 Identities=22% Similarity=0.240 Sum_probs=62.9
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-C-CCCCCCccEEEecc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q-PFPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~~~~fD~V~~~~ 234 (380)
++.+||-+|+|. |..+..+++..|++|+++|.+++.++.+++ .|. ..++..+-.+ . ... +.+|+|+-..
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa---~~vi~~~~~~~~~~~~-~g~Dvvid~~ 265 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGA---DEVVNSRNADEMAAHL-KSFDFILNTV 265 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTC---SEEEETTCHHHHHTTT-TCEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---cEEeccccHHHHHHhh-cCCCEEEECC
Confidence 489999999984 778888888779999999999988887765 232 1222211101 0 111 5799988543
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 235 SGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
... ..++.+.+.|++||++++..
T Consensus 266 g~~------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 266 AAP------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp SSC------CCHHHHHTTEEEEEEEEECC
T ss_pred CCH------HHHHHHHHHhccCCEEEEec
Confidence 321 23677889999999988764
No 328
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.69 E-value=0.048 Score=50.09 Aligned_cols=58 Identities=14% Similarity=0.090 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC
Q 016921 141 MIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARG 205 (380)
Q Consensus 141 ~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~ 205 (380)
+++.++.... .++..|||.-||+|..+....+. +.+++|+|+++...+.+++++...+
T Consensus 241 l~~~~i~~~~------~~~~~VlDpF~GsGtt~~aa~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 241 LPEFFIRMLT------EPDDLVVDIFGGSNTTGLVAERE-SRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp HHHHHHHHHC------CTTCEEEETTCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred HHHHHHHHhC------CCCCEEEECCCCCCHHHHHHHHc-CCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 5666665543 24899999999999999887765 9999999999999999998875443
No 329
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.66 E-value=0.08 Score=48.65 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=63.5
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----CCCCCCccEE
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~V 230 (380)
++.+||-+|+ |.|..+..+++..|++|+++|.+++.++.+.+. .|. ..++...-.+. ....+.+|+|
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~---~~~~~~~~~~~~~~~~~~~~~~~d~v 222 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGF---DGAIDYKNEDLAAGLKRECPKGIDVF 222 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCC---SEEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCC---CEEEECCCHHHHHHHHHhcCCCceEE
Confidence 4899999998 467788888887799999999999887776321 232 11222111111 0113579988
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+.... ...++.+.+.|++||++++...
T Consensus 223 i~~~g-------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 223 FDNVG-------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred EECCC-------cchHHHHHHHHhhCCEEEEEee
Confidence 76432 1478899999999999988653
No 330
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.61 E-value=0.064 Score=49.15 Aligned_cols=59 Identities=20% Similarity=0.248 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHHcC
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSP---VQAQRANALAAARG 205 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~---~~~~~a~~~~~~~~ 205 (380)
.+++.++.... .++..|||.-||+|..+....+. +.+.+|+|+++ ...+.+++++...+
T Consensus 230 ~l~~~~i~~~~------~~~~~vlDpF~GsGtt~~aa~~~-~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 230 AVIERLVRALS------HPGSTVLDFFAGSGVTARVAIQE-GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHS------CTTCEEEETTCTTCHHHHHHHHH-TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhC------CCCCEEEecCCCCCHHHHHHHHc-CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 46666666553 24899999999999999988876 89999999999 99999998876543
No 331
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.56 E-value=0.73 Score=36.20 Aligned_cols=90 Identities=18% Similarity=0.104 Sum_probs=58.0
Q ss_pred CCEEEEECCCcChHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKK---FGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~---~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~ 231 (380)
..+|+=+|+|. ++..+++. .|..|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+|+
T Consensus 7 ~~~viIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGYGR--VGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECcCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 56799999863 44444433 38899999999998877654 24678889987632 1224688887
Q ss_pred eccccCCCCCH--HHHHHHHHHhcCCCcEEEEEe
Q 016921 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+.. ++. ...+-...+.+.|+..++.-.
T Consensus 77 ~~~-----~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 77 LTI-----PNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp ECC-----SCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEC-----CChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 642 232 223444567778888766643
No 332
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.55 E-value=0.027 Score=52.27 Aligned_cols=70 Identities=16% Similarity=0.206 Sum_probs=53.9
Q ss_pred CCEEEEECCCcChHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCCccEEEe
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFG---AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWS 232 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~---~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~~ 232 (380)
..+|||+-||.|.+...+.+. | ..|.++|+++..++..+.++. ...++.+|+.++. ++...+|+|+.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CCeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEE
Confidence 468999999999999999887 5 368999999999988887652 3457788988763 11126899987
Q ss_pred ccc
Q 016921 233 MES 235 (380)
Q Consensus 233 ~~~ 235 (380)
..-
T Consensus 75 gpP 77 (343)
T 1g55_A 75 SPP 77 (343)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 333
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.44 E-value=0.21 Score=45.86 Aligned_cols=91 Identities=14% Similarity=0.138 Sum_probs=63.3
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC------CCCccEE
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP------DGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~fD~V 230 (380)
++.+||-+|+| .|..+..+++..|++|+++|.++..++.+++ .|.. .+ .|..+..+. .+.+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~--~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD---LV--VNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---EE--ECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC---EE--ecCCCccHHHHHHHHhCCCCEE
Confidence 38999999986 4777778887778999999999988887754 3321 11 233321110 0468988
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+-.... ...++.+.+.|++||++++..
T Consensus 235 id~~g~------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 235 VVTAVS------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EESSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred EECCCC------HHHHHHHHHHhhcCCEEEEec
Confidence 754321 356888999999999988764
No 334
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.36 E-value=0.4 Score=45.25 Aligned_cols=96 Identities=21% Similarity=0.086 Sum_probs=63.1
Q ss_pred CCCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCCcc
Q 016921 157 KRPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFD 228 (380)
Q Consensus 157 ~~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD 228 (380)
.++.+||=+|+|. |..+..+++..|+ +|+++|.++..++.+++. |. -.++..+-.++. .....+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GA---DHVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TC---SEEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CC---CEEEcCCCCCHHHHHHHHhCCCCCC
Confidence 4589999999874 7788888887788 999999999988887653 32 122221111110 1234699
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhc----CCCcEEEEEec
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVT----APAGTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~L----kpgG~l~~~~~ 264 (380)
+|+-.- ......+..+.+.| ++||++++...
T Consensus 285 ~vid~~-----g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 285 LFLEAT-----GVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp EEEECS-----SCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred EEEECC-----CCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 887532 23334555565666 99999998654
No 335
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.23 E-value=0.2 Score=46.74 Aligned_cols=92 Identities=16% Similarity=0.271 Sum_probs=63.7
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----CC-----CCCCC
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----QP-----FPDGQ 226 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~-----~~~~~ 226 (380)
++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++ .|. -.++ |..+ +. ...+.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa---~~vi--~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGA---TDFV--NPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC---CEEE--CGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCC---ceEE--eccccchhHHHHHHHHhCCC
Confidence 489999999874 7788888887787 89999999988887764 332 1122 2221 10 11237
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-cEEEEEec
Q 016921 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (380)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~~~~~ 264 (380)
+|+|+-.-.. ...++.+.+.|++| |++++...
T Consensus 263 ~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 263 VDFSLECVGN------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp BSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCCC------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 9998754321 35688999999999 99887643
No 336
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.14 E-value=0.053 Score=49.41 Aligned_cols=88 Identities=15% Similarity=0.216 Sum_probs=60.2
Q ss_pred CCCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccc
Q 016921 157 KRPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (380)
Q Consensus 157 ~~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (380)
.++.+||=+|+| .|..+..+++..|++|++++ +++.++.+++. | ...+..|...+ .+.+|+|+-.-.
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l----G----a~~v~~d~~~v---~~g~Dvv~d~~g 208 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR----G----VRHLYREPSQV---TQKYFAIFDAVN 208 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH----T----EEEEESSGGGC---CSCEEEEECC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc----C----CCEEEcCHHHh---CCCccEEEECCC
Confidence 459999999997 48888888887799999999 88888877652 3 22222242222 567999875322
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
- ..+..+.+.|++||++++..
T Consensus 209 ~-------~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 S-------QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ------------TTGGGEEEEEEEEEEC
T ss_pred c-------hhHHHHHHHhcCCCEEEEEe
Confidence 1 12356789999999998874
No 337
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.13 E-value=0.4 Score=44.51 Aligned_cols=90 Identities=19% Similarity=0.295 Sum_probs=64.0
Q ss_pred CCCEEEEEC-CC-cChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-C-----CCCCCCcc
Q 016921 158 RPKNVVDVG-CG-IGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q-----PFPDGQFD 228 (380)
Q Consensus 158 ~~~~vLDiG-cG-tG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-----~~~~~~fD 228 (380)
++.+||=+| +| .|..+..+++.. +++|+++|.+++.++.+++ .|. -.++ |..+ + ....+.+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGa---d~vi--~~~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGA---HHVI--DHSKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTC---SEEE--CTTSCHHHHHHTTCSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCC---CEEE--eCCCCHHHHHHHhcCCCce
Confidence 588999998 55 688999999874 8999999999988887764 332 1122 2211 1 12235799
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
+|+-.. .....++.+.+.|++||++++.
T Consensus 242 vvid~~------g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTT------HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECS------CHHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECC------CchhhHHHHHHHhcCCCEEEEE
Confidence 887532 2345788999999999999886
No 338
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.11 E-value=0.14 Score=47.16 Aligned_cols=93 Identities=17% Similarity=0.115 Sum_probs=61.9
Q ss_pred CCCEEEEECCC--cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCCccE
Q 016921 158 RPKNVVDVGCG--IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (380)
Q Consensus 158 ~~~~vLDiGcG--tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~ 229 (380)
++.+||-+|+| .|..+..+++..|++|+++|.+++.++.+++. |. . .++...-.++. .....+|+
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga--~-~~~~~~~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GA--A-YVIDTSTAPLYETVMELTNGIGADA 216 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TC--S-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CC--c-EEEeCCcccHHHHHHHHhCCCCCcE
Confidence 48999999987 57788888887799999999999888877652 32 1 12221111110 12347999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+-...- ..+.+..+.|++||++++...
T Consensus 217 vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 217 AIDSIGG-------PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEESSCH-------HHHHHHHHTEEEEEEEEECCC
T ss_pred EEECCCC-------hhHHHHHHHhcCCCEEEEEee
Confidence 8864321 223445589999999988754
No 339
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.10 E-value=0.023 Score=52.56 Aligned_cols=92 Identities=17% Similarity=0.099 Sum_probs=64.5
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc----CC-CCCCCCCCCccEE
Q 016921 159 PKNVVDVGCGI-GGSSRYLAKKF--GAKCQGITLSPVQAQRANALAAARGLADKVSFQVG----DA-LQQPFPDGQFDLV 230 (380)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~----d~-~~~~~~~~~fD~V 230 (380)
+.+||-+|+|. |..+..+++.. |++|+++|.+++.++.+++. |. -.++.. |. ..+. ....+|+|
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga---~~vi~~~~~~~~~~~~~-~g~g~D~v 242 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GA---DYVSEMKDAESLINKLT-DGLGASIA 242 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TC---SEEECHHHHHHHHHHHH-TTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CC---CEEeccccchHHHHHhh-cCCCccEE
Confidence 89999999974 78888899988 99999999999988887652 32 112211 10 0111 12379998
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+-.-.. ...++.+.+.|++||++++...
T Consensus 243 id~~g~------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 243 IDLVGT------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EESSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC------hHHHHHHHHHhhcCCEEEEeCC
Confidence 864321 3468899999999999887643
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.08 E-value=0.25 Score=46.00 Aligned_cols=92 Identities=17% Similarity=0.192 Sum_probs=63.7
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----C-----CCCCCC
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----Q-----PFPDGQ 226 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~-----~~~~~~ 226 (380)
++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. |. -.++ |..+ + ....+.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi--~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GA---TECI--NPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TC---SEEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CC---ceEe--ccccccccHHHHHHHHhCCC
Confidence 489999999874 7788888887787 899999999888877642 32 1122 2211 1 011247
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-cEEEEEec
Q 016921 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (380)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~~~~~ 264 (380)
+|+|+-.... ...++.+.+.|+++ |++++...
T Consensus 261 ~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 261 VDYSFECIGN------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp BSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCCc------HHHHHHHHHhhccCCcEEEEEec
Confidence 9998754321 35688999999999 99887653
No 341
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.03 E-value=0.24 Score=46.19 Aligned_cols=91 Identities=18% Similarity=0.199 Sum_probs=63.1
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----C-----CCCCCC
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----Q-----PFPDGQ 226 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~-----~~~~~~ 226 (380)
++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++ .|. -.++ |..+ + ....+.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa---~~vi--~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGA---TECV--NPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC---SEEE--CGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC---ceEe--cccccchhHHHHHHHHhCCC
Confidence 489999999874 7788888887787 89999999988887754 332 1122 2221 1 011247
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-cEEEEEe
Q 016921 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVT 263 (380)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~~~~ 263 (380)
+|+|+-.-.. ...++.+.+.|++| |++++..
T Consensus 262 ~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 262 VDFSFEVIGR------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp BSEEEECSCC------HHHHHHHHHHBCTTTCEEEECS
T ss_pred CcEEEECCCC------HHHHHHHHHHhhcCCcEEEEec
Confidence 9998754321 35688899999999 9988764
No 342
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.01 E-value=0.14 Score=46.94 Aligned_cols=94 Identities=13% Similarity=0.029 Sum_probs=64.3
Q ss_pred CCCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCCcc
Q 016921 157 KRPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFD 228 (380)
Q Consensus 157 ~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD 228 (380)
.++.+||-+|+ |.|..+..+++..|++|+++|.+++.++.+++ .|. -.++..+-.+.. .....+|
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga---~~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGA---EYLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC---SEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---cEEEeCCCchHHHHHHHHhCCCCce
Confidence 35899999993 36778888888779999999999988887754 232 122222211110 1234699
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+-...- ..++.+.+.|++||++++...
T Consensus 220 ~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 220 ASFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 98865432 357888999999999988653
No 343
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.99 E-value=0.24 Score=45.51 Aligned_cols=92 Identities=14% Similarity=0.110 Sum_probs=63.1
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-------CCCCCc
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-------FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-------~~~~~f 227 (380)
++.+||-+|+ |.|..+..+++..|++|+++|.++..++.+++. .|. . .++ |..+. . ...+.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~--~-~~~--d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGF--D-DAF--NYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCC--S-EEE--ETTSCSCSHHHHHHHCTTCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCC--c-eEE--ecCCHHHHHHHHHHHhCCCC
Confidence 4899999997 467777888877789999999999887776532 232 1 122 32221 1 112469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|+.... ...++.+.+.|++||++++...
T Consensus 227 d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 227 DIYFENVG-------GKMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred cEEEECCC-------HHHHHHHHHHHhcCCEEEEEcc
Confidence 99886532 1478899999999999988643
No 344
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.93 E-value=0.24 Score=46.16 Aligned_cols=94 Identities=15% Similarity=0.068 Sum_probs=63.7
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCC-----CCCCCCcc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDA--LQQ-----PFPDGQFD 228 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~-----~~~~~~fD 228 (380)
++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++ .|. -.++..+- .++ ....+.+|
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa---~~vi~~~~~~~~~~~~i~~~t~gg~D 263 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGA---TECLNPKDYDKPIYEVICEKTNGGVD 263 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTC---SEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCC---cEEEecccccchHHHHHHHHhCCCCC
Confidence 489999999874 7788888887787 89999999988877764 332 11221110 111 01124799
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCC-cEEEEEec
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~~~~~ 264 (380)
+|+-.-.. ...++.+.+.|++| |++++...
T Consensus 264 vvid~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 264 YAVECAGR------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp EEEECSCC------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred EEEECCCC------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 98854321 35688999999999 99887653
No 345
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.88 E-value=0.21 Score=45.57 Aligned_cols=94 Identities=21% Similarity=0.146 Sum_probs=64.6
Q ss_pred CCCCEEEEEC-C-CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC------CCCCCCcc
Q 016921 157 KRPKNVVDVG-C-GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ------PFPDGQFD 228 (380)
Q Consensus 157 ~~~~~vLDiG-c-GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~fD 228 (380)
.++.+||-+| + |.|..+..+++..|++|+++|.+++.++.+++. |. -.++..+-.++ ......+|
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga---~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GA---WETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TC---SEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC---CEEEeCCCccHHHHHHHHhCCCCce
Confidence 3589999998 3 468888888887799999999999988877642 32 12222211111 01235799
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+-...- ..+..+.+.|++||++++...
T Consensus 212 vvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 212 VVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEESSCG-------GGHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCh-------HHHHHHHHHhcCCCEEEEEec
Confidence 98864332 357788999999999998754
No 346
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.87 E-value=0.2 Score=46.19 Aligned_cols=92 Identities=18% Similarity=0.217 Sum_probs=63.7
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCCc
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (380)
++.+||-+|+| .|..+..+++..|+ +|+++|.+++.++.+++. |. -.++ |..+.. .....+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga---~~~~--~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GA---DYVI--NPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TC---SEEE--CTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CC---CEEE--CCCCcCHHHHHHHHcCCCCC
Confidence 48899999986 37777888887788 999999999888877642 32 1122 222211 112369
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|+-.... ...++.+.+.|+++|++++...
T Consensus 238 D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 238 DVFLEFSGA------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEECSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCC------HHHHHHHHHHHhcCCEEEEEcc
Confidence 998864321 3568889999999999887653
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.85 E-value=1.3 Score=45.04 Aligned_cols=174 Identities=11% Similarity=0.043 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc---------CCEEEEEeCCHHHHHHHHHHHHHcC--
Q 016921 137 AQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF---------GAKCQGITLSPVQAQRANALAAARG-- 205 (380)
Q Consensus 137 ~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~---------~~~v~giD~s~~~~~~a~~~~~~~~-- 205 (380)
...+++++.+.... . .+...|+-||||.=.....+.... +..++=+|. |+.++.=++.+...+
T Consensus 91 ~~d~~v~~fl~~~~-~----~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l 164 (695)
T 2zwa_A 91 AIRSRLNSIIEQTP-Q----DKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPEL 164 (695)
T ss_dssp HHHHHHHHHHHHSC-T----TSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHhccc-C----CCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHH
Confidence 34455555555431 1 125689999999988888886541 335555666 444444444443211
Q ss_pred ------------CC---------CCeEEEEcCCCCCC----------C-CCCCccEEEeccccCCCCC--HHHHHHHHHH
Q 016921 206 ------------LA---------DKVSFQVGDALQQP----------F-PDGQFDLVWSMESGEHMPD--KSKFVSELAR 251 (380)
Q Consensus 206 ------------~~---------~~v~~~~~d~~~~~----------~-~~~~fD~V~~~~~l~~~~~--~~~~l~~~~r 251 (380)
.+ ++..++..|+.+.. + ..+..-++++-.++.+++. ..++|+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~ 244 (695)
T 2zwa_A 165 SKIIGLSEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK 244 (695)
T ss_dssp HHHTTCCSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT
T ss_pred HHhhccccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh
Confidence 01 37888999998741 2 3333445667778888853 4678888775
Q ss_pred hcCCCcEEEEEeccCCCCCCCccccchHHHHHHHHHhhc-cCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 016921 252 VTAPAGTIIIVTWCHRDLAPSEESLQPWEQELLKKICDA-YYLPAWCSTADYVKLLQSLSLEDIKAEDWS 320 (380)
Q Consensus 252 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~aGf~~v~~~~~~ 320 (380)
+ ++|.+++.+...+.. ....+...+...+...... ..+..+.+.++..+.|.++||+.+...++.
T Consensus 245 -~-~~~~~~~~e~~~~~~--~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~ 310 (695)
T 2zwa_A 245 -M-ENSHFIILEQLIPKG--PFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMF 310 (695)
T ss_dssp -S-SSEEEEEEEECCTTC--TTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHH
T ss_pred -C-CCceEEEEEeecCCC--CCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHH
Confidence 4 677777777443211 1122222222222221111 111235689999999999999987766443
No 348
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.84 E-value=0.27 Score=45.89 Aligned_cols=92 Identities=17% Similarity=0.180 Sum_probs=63.5
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----CC-----CCCCC
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ----QP-----FPDGQ 226 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~-----~~~~~ 226 (380)
++.+||-+|+| .|..+..+++..|+ +|+++|.+++.++.+++ .|. -.++ |..+ +. ...+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa---~~vi--~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGA---TDCL--NPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC---SEEE--CGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC---cEEE--ccccccchHHHHHHHHhCCC
Confidence 48999999987 47788888887787 89999999988877754 332 1122 2221 10 11237
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCC-cEEEEEec
Q 016921 227 FDLVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (380)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~~~~~ 264 (380)
+|+|+-.-.- ...++.+.+.|++| |++++...
T Consensus 266 ~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 266 VDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp BSEEEESSCC------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ccEEEECCCC------HHHHHHHHHHhhcCCCEEEEECC
Confidence 9988754321 35688999999999 99887643
No 349
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.81 E-value=0.31 Score=45.25 Aligned_cols=93 Identities=16% Similarity=0.099 Sum_probs=64.1
Q ss_pred CCCEEEEEC--CCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----CCCCCCccEE
Q 016921 158 RPKNVVDVG--CGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiG--cGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~V 230 (380)
++.+||-+| +|.|..+..+++..|++|+++|.+++.++.+++ .|. -.++..+-.++ ....+.+|+|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga---~~~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGC---DRPINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC---SEEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCC---cEEEecCChhHHHHHHHhcCCCCCEE
Confidence 489999999 347888888888778999999999988877764 332 12222211111 0112469998
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+-... . ..++.+.+.|+++|++++...
T Consensus 236 id~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 236 YESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 86533 1 478889999999999888653
No 350
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.72 E-value=0.19 Score=46.35 Aligned_cols=92 Identities=23% Similarity=0.322 Sum_probs=63.7
Q ss_pred CCCEEEEECCC--cChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------CCC-CC
Q 016921 158 RPKNVVDVGCG--IGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPD-GQ 226 (380)
Q Consensus 158 ~~~~vLDiGcG--tG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~-~~ 226 (380)
++.+||-+|+| .|..+..+++.. |++|+++|.+++.++.+++. |. . .++ |..+.. ... +.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~--~-~~~--~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GA--D-YVI--NASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TC--S-EEE--ETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CC--C-EEe--cCCCccHHHHHHHHhcCCC
Confidence 48999999987 566777788877 89999999999888877542 32 1 122 222111 112 47
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+|+....- ...++.+.+.|++||++++...
T Consensus 241 ~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 241 VDAVIDLNNS------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEEEEESCCC------HHHHTTGGGGEEEEEEEEECCS
T ss_pred ceEEEECCCC------HHHHHHHHHHHhcCCEEEEECC
Confidence 9998865331 3467888999999999887643
No 351
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.60 E-value=0.17 Score=46.72 Aligned_cols=93 Identities=19% Similarity=0.262 Sum_probs=63.8
Q ss_pred CCCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCCcc
Q 016921 157 KRPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFD 228 (380)
Q Consensus 157 ~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD 228 (380)
.++.+||-+|+ |.|..+..+++..|++|++++.+++.++.+++. |. -.++..+ .++. .....+|
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga---~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GA---DIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TC---SEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC---cEEecCc-hhHHHHHHHHhCCCCce
Confidence 34899999997 468888888887799999999999888777652 32 1223222 2210 1234799
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+-...- ..+..+.+.|++||++++...
T Consensus 230 vvid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 230 MVVDPIGG-------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEEESCC---------CHHHHHHTEEEEEEEEEC--
T ss_pred EEEECCch-------hHHHHHHHhhcCCCEEEEEEc
Confidence 99865432 257788999999999988653
No 352
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.57 E-value=0.35 Score=44.48 Aligned_cols=92 Identities=21% Similarity=0.207 Sum_probs=64.4
Q ss_pred CCCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCC
Q 016921 157 KRPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQ 226 (380)
Q Consensus 157 ~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~ 226 (380)
.++.+||-+|+ |.|..+..+++..|++|+++|.+++.++.+++ .|. . .++ |..+.. .....
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~ga--~-~~~--d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----LGA--D-ETV--NYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC--S-EEE--ETTSTTHHHHHHHHTTTTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC--C-EEE--cCCcccHHHHHHHHhCCCC
Confidence 35899999998 57788888888778999999999998887764 232 1 122 322211 12247
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+|+.... . ..++.+.+.|+++|++++...
T Consensus 236 ~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 236 ADKVVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EEEEEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred ceEEEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 999986544 2 247788899999999887653
No 353
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.55 E-value=0.2 Score=45.76 Aligned_cols=91 Identities=15% Similarity=0.089 Sum_probs=62.3
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCCc
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (380)
++.+||-+|+ |.|..+..++...|++|+++|.+++.++.+++. +. . .++ |..+.. .....+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----g~--~-~~~--~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GA--W-QVI--NYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TC--S-EEE--ETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC--C-EEE--ECCCccHHHHHHHHhCCCCc
Confidence 4899999993 467777777776689999999999888777652 32 1 122 222211 123469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|+.... ...++.+.+.|++||++++...
T Consensus 211 D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 211 RVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 99886543 2457889999999999887653
No 354
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.42 E-value=0.063 Score=50.35 Aligned_cols=94 Identities=22% Similarity=0.255 Sum_probs=64.3
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC--CCCC-----CCCCCCcc
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGD--ALQQ-----PFPDGQFD 228 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~-----~~~~~~fD 228 (380)
++.+||=+|+| .|..+..+++..|+ +|+++|.+++.++.+++ .|.. .++... -.++ ...++.+|
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~~~gg~D 265 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---EFVNPKDHDKPIQEVIVDLTDGGVD 265 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---EEEccccCchhHHHHHHHhcCCCCC
Confidence 48899999987 48888888887787 89999999988887754 3321 222111 1111 01124799
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCC-cEEEEEec
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVTAPA-GTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~Lkpg-G~l~~~~~ 264 (380)
+|+-... . ...++.+.+.|++| |++++...
T Consensus 266 ~vid~~g-----~-~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 266 YSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp EEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred EEEECCC-----C-HHHHHHHHHHhhccCCEEEEEcc
Confidence 9885432 1 35688999999997 99988654
No 355
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.36 E-value=0.19 Score=46.39 Aligned_cols=92 Identities=21% Similarity=0.218 Sum_probs=62.5
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C-------CCCCCc
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P-------FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-------~~~~~f 227 (380)
++.+||-+|+ |.|..+..++...|++|+++|.+++.++.+++ .|. . .++ |..+. . ...+.+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~--~-~~~--d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGG--E-VFI--DFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTC--C-EEE--ETTTCSCHHHHHHHHHTSCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCC--c-eEE--ecCccHhHHHHHHHHhCCCC
Confidence 4899999998 46777777777668999999999887766654 232 1 122 33211 1 011268
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|+..... ...++.+.+.|++||++++...
T Consensus 240 D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 240 HGVINVSVS------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEEECSSC------HHHHHHHTTSEEEEEEEEECCC
T ss_pred CEEEECCCc------HHHHHHHHHHHhcCCEEEEEeC
Confidence 998865431 3578899999999999887643
No 356
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.35 E-value=0.67 Score=43.38 Aligned_cols=43 Identities=16% Similarity=0.302 Sum_probs=34.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc--------CCEEEEEeCCHHHHHHHHHHH
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF--------GAKCQGITLSPVQAQRANALA 201 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~--------~~~v~giD~s~~~~~~a~~~~ 201 (380)
+..|+|+|.|+|.++..+.+.. ..+++.||+|+...+.-++++
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 5689999999999998887643 248999999998877555544
No 357
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.26 E-value=0.17 Score=46.64 Aligned_cols=93 Identities=16% Similarity=0.146 Sum_probs=65.4
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCCccE
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~ 229 (380)
++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++ .|.. .++..+- +.. .....+|+
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~-~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD---AAVKSGA-GAADAIRELTGGQGATA 242 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS---EEEECST-THHHHHHHHHGGGCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC---EEEcCCC-cHHHHHHHHhCCCCCeE
Confidence 489999999874 88888888877 7899999999998888765 3321 2222211 110 01237898
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+-.-. . ...++.+.+.|++||++++...
T Consensus 243 v~d~~G-----~-~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 243 VFDFVG-----A-QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp EEESSC-----C-HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEECCC-----C-HHHHHHHHHHHhcCCEEEEECC
Confidence 875332 1 3478899999999999998754
No 358
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.19 E-value=0.16 Score=47.17 Aligned_cols=89 Identities=16% Similarity=0.194 Sum_probs=60.8
Q ss_pred CEEEEECCC-cChHH-HHHH-HHcCCE-EEEEeCCHH---HHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC-----CCCc
Q 016921 160 KNVVDVGCG-IGGSS-RYLA-KKFGAK-CQGITLSPV---QAQRANALAAARGLADKVSFQVGDALQQPFP-----DGQF 227 (380)
Q Consensus 160 ~~vLDiGcG-tG~~~-~~l~-~~~~~~-v~giD~s~~---~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~f 227 (380)
.+||-+|+| .|..+ ..++ +..|++ |+++|.+++ .++.+++ .| ...+ |..+..+. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lG----a~~v--~~~~~~~~~i~~~~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LD----ATYV--DSRQTPVEDVPDVYEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TT----CEEE--ETTTSCGGGHHHHSCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cC----Cccc--CCCccCHHHHHHhCCCC
Confidence 899999986 47778 8888 766876 999999887 7777654 33 2222 33321111 1368
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|+-... . ...++.+.+.|++||++++...
T Consensus 244 Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 244 DFIYEATG-----F-PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCC-----C-hHHHHHHHHHHhcCCEEEEEeC
Confidence 98875322 1 3468899999999999888653
No 359
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.12 E-value=0.27 Score=45.49 Aligned_cols=90 Identities=17% Similarity=0.232 Sum_probs=62.0
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCCc
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (380)
++.+||-+|+ |.|..+..+++..|++|+++|.+++.++.+++ .|. . .++ |..+.. .....+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga--~-~~~--d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGA--H-EVF--NHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--S-EEE--ETTSTTHHHHHHHHHCTTCE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCC--C-EEE--eCCCchHHHHHHHHcCCCCc
Confidence 4899999996 46777777777778999999999988776643 232 1 122 222211 112469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
|+|+.... ...+..+.+.|++||++++..
T Consensus 241 D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 99886533 235778899999999988765
No 360
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.10 E-value=0.46 Score=43.88 Aligned_cols=92 Identities=12% Similarity=0.120 Sum_probs=61.9
Q ss_pred CC--CEEEEECC--CcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------CCCC
Q 016921 158 RP--KNVVDVGC--GIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPDG 225 (380)
Q Consensus 158 ~~--~~vLDiGc--GtG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~ 225 (380)
++ .+||-.|+ |.|..+..++...|+ +|+++|.+++.++.+++. .|. . .++ |..+.. ...+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~--~-~~~--d~~~~~~~~~~~~~~~~ 229 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGF--D-AAI--NYKKDNVAEQLRESCPA 229 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCC--S-EEE--ETTTSCHHHHHHHHCTT
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCC--c-eEE--ecCchHHHHHHHHhcCC
Confidence 37 89999997 456677777776688 999999998777666532 232 1 122 322211 1112
Q ss_pred CccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 226 QFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 226 ~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.+|+|+.... ...++.+.+.|++||++++...
T Consensus 230 ~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 230 GVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp CEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 6898886543 2678899999999999988653
No 361
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.07 E-value=0.35 Score=44.58 Aligned_cols=90 Identities=14% Similarity=0.265 Sum_probs=62.5
Q ss_pred CCCEEEEE-CCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-C-----CCCCCCccE
Q 016921 158 RPKNVVDV-GCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-Q-----PFPDGQFDL 229 (380)
Q Consensus 158 ~~~~vLDi-GcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-----~~~~~~fD~ 229 (380)
++.+||=+ |+| .|..+..+++..|++|+++|.+++.++.+++. |. -.++ |..+ + ....+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga---~~vi--~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM----GA---DIVL--NHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH----TC---SEEE--CTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC---cEEE--ECCccHHHHHHHhCCCCccE
Confidence 48899999 455 57788888887799999999999988887762 32 1112 2211 1 012357998
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
|+-.. .....++.+.+.|+++|+++..
T Consensus 221 v~d~~------g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 VFCTF------NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEESS------CHHHHHHHHHHHEEEEEEEEES
T ss_pred EEECC------CchHHHHHHHHHhccCCEEEEE
Confidence 88542 2345678999999999999764
No 362
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.96 E-value=0.34 Score=44.79 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=62.2
Q ss_pred CCCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCC
Q 016921 157 KRPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQ 226 (380)
Q Consensus 157 ~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~ 226 (380)
.++.+||-+|+ |.|..+..++...|++|+++|.+++.++.+++. |. . ..+ |..+.. .....
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~--~-~~~--~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GA--A-AGF--NYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TC--S-EEE--ETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC--c-EEE--ecCChHHHHHHHHHhcCCC
Confidence 34899999983 467777777776789999999999888877432 32 1 122 222211 12246
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 227 FDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+|+....- ..++.+.+.|++||++++...
T Consensus 232 ~d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 232 VNLILDCIGG-------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEEEESSCG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred ceEEEECCCc-------hHHHHHHHhccCCCEEEEEec
Confidence 9998865432 246788899999999888653
No 363
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.95 E-value=0.28 Score=45.94 Aligned_cols=95 Identities=18% Similarity=0.113 Sum_probs=64.3
Q ss_pred CCCCEEEEECCC-cChHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC---CCCC-----C-CCCC
Q 016921 157 KRPKNVVDVGCG-IGGSSRYLAKKFG-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGD---ALQQ-----P-FPDG 225 (380)
Q Consensus 157 ~~~~~vLDiGcG-tG~~~~~l~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~-----~-~~~~ 225 (380)
.++.+||-+|+| .|..+..+++..| .+|+++|.+++.++.+++ .|. -.++..+ -.++ . ....
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa---~~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGA---DLTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTC---SEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCC---cEEEeccccCcchHHHHHHHHhCCC
Confidence 348999999977 4778888888778 699999999988887764 332 1222221 0010 0 1223
Q ss_pred CccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 226 QFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 226 ~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.+|+|+-.... ...++.+.+.|++||++++...
T Consensus 267 g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 267 GADFILEATGD------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp CEEEEEECSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCcEEEECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 69998854321 2357888999999999888643
No 364
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.93 E-value=0.17 Score=45.66 Aligned_cols=56 Identities=25% Similarity=0.412 Sum_probs=39.2
Q ss_pred CCeEEEEcCCCCC--CCCCCCccEEEeccccCCC--------------------CCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 208 DKVSFQVGDALQQ--PFPDGQFDLVWSMESGEHM--------------------PDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 208 ~~v~~~~~d~~~~--~~~~~~fD~V~~~~~l~~~--------------------~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.++.++++|..+. .+++++||+|++.=-.... .....+++++.++|||||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3678999998762 2567899999985322111 012357789999999999998864
No 365
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.54 E-value=0.99 Score=35.24 Aligned_cols=90 Identities=11% Similarity=0.091 Sum_probs=55.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~ 231 (380)
..+|+=+|+| .++..+++.+ |.+|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 4579999985 4555555544 7899999999987766553 23678888887631 1235689887
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
.... . .+....+-...+.+. ...++..
T Consensus 76 ~~~~--~-~~~n~~~~~~a~~~~-~~~iia~ 102 (141)
T 3llv_A 76 ITGS--D-DEFNLKILKALRSVS-DVYAIVR 102 (141)
T ss_dssp ECCS--C-HHHHHHHHHHHHHHC-CCCEEEE
T ss_pred EecC--C-HHHHHHHHHHHHHhC-CceEEEE
Confidence 6432 1 112233344455555 5555553
No 366
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.49 E-value=0.29 Score=45.23 Aligned_cols=94 Identities=19% Similarity=0.218 Sum_probs=63.6
Q ss_pred CCCCEEEEEC-C-CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CCCCCccE
Q 016921 157 KRPKNVVDVG-C-GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FPDGQFDL 229 (380)
Q Consensus 157 ~~~~~vLDiG-c-GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~fD~ 229 (380)
.++.+||-+| + |.|..+..+++..|++|+++|.+++.++.+++. |. -.++..+-.+.. ...+.+|+
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga---~~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GA---KRGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TC---SEEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC---CEEEeCCchHHHHHHHHHhCCCceE
Confidence 3589999995 3 367788888887799999999999988877652 32 122222111110 01347999
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+-...- ..+..+.+.|++||++++...
T Consensus 239 vid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 239 ILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred EEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 8865432 257788999999999888653
No 367
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.49 E-value=0.74 Score=44.17 Aligned_cols=93 Identities=24% Similarity=0.220 Sum_probs=64.1
Q ss_pred CCCCEEEEECC-C-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------------
Q 016921 157 KRPKNVVDVGC-G-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------------- 221 (380)
Q Consensus 157 ~~~~~vLDiGc-G-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------- 221 (380)
.++.+||=+|+ | .|..+..+++..|+++++++.++.-++.+++ .|. ..++...-.+..
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~----lGa---~~vi~~~~~d~~~~~~~~~~~~~~~ 299 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA----MGA---EAIIDRNAEGYRFWKDENTQDPKEW 299 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC---CEEEETTTTTCCSEEETTEECHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh----hCC---cEEEecCcCcccccccccccchHHH
Confidence 45899999997 4 6888888888779999999999988888765 232 112221111110
Q ss_pred ----------CCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 222 ----------FPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 222 ----------~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.....+|+|+-.-. ...+..+.+.|++||++++..
T Consensus 300 ~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 300 KRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEe
Confidence 11247998875322 157888999999999998864
No 368
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.46 E-value=0.66 Score=42.51 Aligned_cols=94 Identities=19% Similarity=0.204 Sum_probs=62.0
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCCccE
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDL 229 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~ 229 (380)
++.+||=+|+|. |..+..+++..|+ .++++|.+++-++.+++ .|. ..++..+-.+.+ .....+|+
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa---~~~i~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGA---MQTFNSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC---SEEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCC---eEEEeCCCCCHHHHHHhhcccCCccc
Confidence 489999999874 6677777877765 57899999998887765 332 222222211110 11245787
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+-... ....++.+.+.|++||.+++...
T Consensus 233 v~d~~G------~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 233 ILETAG------VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp EEECSC------SHHHHHHHHHHCCTTCEEEECCC
T ss_pred cccccc------ccchhhhhhheecCCeEEEEEec
Confidence 764322 24578889999999999988653
No 369
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.43 E-value=0.28 Score=45.59 Aligned_cols=88 Identities=15% Similarity=0.221 Sum_probs=59.7
Q ss_pred CCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC------CCCcc
Q 016921 159 PKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSP---VQAQRANALAAARGLADKVSFQVGDALQQPFP------DGQFD 228 (380)
Q Consensus 159 ~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~---~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~fD 228 (380)
+.+||-+|+| .|..+..+++..|++|+++|.++ +.++.+++ .| ...+ | .+ .+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~----~g----a~~v--~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE----TK----TNYY--N-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH----HT----CEEE--E-CT-TCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH----hC----Ccee--c-hH-HHHHHHHHhCCCCC
Confidence 7899999985 36666677776688999999987 76666654 23 2222 3 22 211 14699
Q ss_pred EEEeccccCCCCCHHHHH-HHHHHhcCCCcEEEEEec
Q 016921 229 LVWSMESGEHMPDKSKFV-SELARVTAPAGTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l-~~~~r~LkpgG~l~~~~~ 264 (380)
+|+...... ..+ +.+.+.|++||++++...
T Consensus 249 ~vid~~g~~------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 249 VIIDATGAD------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEEECCCCC------THHHHHHGGGEEEEEEEEECSC
T ss_pred EEEECCCCh------HHHHHHHHHHHhcCCEEEEEec
Confidence 988654321 245 888999999999888643
No 370
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.38 E-value=0.41 Score=43.73 Aligned_cols=91 Identities=16% Similarity=0.128 Sum_probs=62.5
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------CCCCCc
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------FPDGQF 227 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~f 227 (380)
++.+||-+|+ |.|..+..++...|++|+++|.+++.++.+++ .|. . ..+ |..+.. .....+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g~--~-~~~--d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LGC--H-HTI--NYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTC--S-EEE--ETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC--C-EEE--ECCCHHHHHHHHHHhCCCCC
Confidence 4899999995 56777777777778999999999988777754 232 1 122 322211 112469
Q ss_pred cEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 228 DLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 228 D~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
|+|+....- ..++.+.+.|++||++++...
T Consensus 216 d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 216 DVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEEEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 998865432 357888999999999887653
No 371
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.35 E-value=0.016 Score=53.64 Aligned_cols=91 Identities=18% Similarity=0.240 Sum_probs=62.0
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-------CCCCcc
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-------PDGQFD 228 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~fD 228 (380)
++.+||-+|+| .|..+..+++..|+ +|+++|.+++.++.+++. . . .++ |..+..+ ....+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~--~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RLV--NPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EEE--CTTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hcc--CcCccCHHHHHHHhcCCCCC
Confidence 48899999986 37778888887788 899999999877766542 1 1 111 2222110 024699
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+-... . ...++.+.+.|+++|++++...
T Consensus 234 ~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 234 VLLEFSG-----N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 9875432 1 3568889999999999887643
No 372
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.22 E-value=0.059 Score=50.14 Aligned_cols=95 Identities=21% Similarity=0.215 Sum_probs=62.5
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC-CC--CCCCCCccEEEec
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL-QQ--PFPDGQFDLVWSM 233 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~--~~~~~~fD~V~~~ 233 (380)
++.+||-+|+| .|..+..+++..|++|+++|.++..++.+++ .|. -.++..+-. +. ... +.+|+|+-.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa---~~v~~~~~~~~~~~~~~-~~~D~vid~ 250 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGA---DHYIATLEEGDWGEKYF-DTFDLIVVC 250 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTC---SEEEEGGGTSCHHHHSC-SCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCC---CEEEcCcCchHHHHHhh-cCCCEEEEC
Confidence 48999999986 4778888888779999999999988887765 232 122222111 11 111 479999865
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
..... ...++.+.+.|++||++++...
T Consensus 251 ~g~~~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 251 ASSLT----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CSCST----TCCTTTGGGGEEEEEEEEECCC
T ss_pred CCCCc----HHHHHHHHHHhcCCCEEEEecC
Confidence 43200 1235567889999999887643
No 373
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=91.96 E-value=0.42 Score=43.81 Aligned_cols=66 Identities=17% Similarity=0.072 Sum_probs=49.4
Q ss_pred CCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC-CCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP-DGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~V~~~ 233 (380)
+.+|||+.||.|.+...+.+. |. .+.++|+++...+..+.+... .. .+|+.++... -..+|+|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~------~~--~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGE------KP--EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSC------CC--BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCC------CC--cCCHHHcCHhhCCCCCEEEEC
Confidence 679999999999999999876 55 477899999999888877632 11 5777765311 1258999874
No 374
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.76 E-value=0.2 Score=45.68 Aligned_cols=91 Identities=15% Similarity=0.213 Sum_probs=62.1
Q ss_pred EEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-CCCCCCccEEEeccccC
Q 016921 161 NVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-PFPDGQFDLVWSMESGE 237 (380)
Q Consensus 161 ~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V~~~~~l~ 237 (380)
+||=+|+ |.|..+..+++..|++|+++|.+++.++.+++. |.. ..+-..+.... .+..+.+|+|+-.-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~~~~~~~d~v~d~~--- 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL----GAN--RILSRDEFAESRPLEKQLWAGAIDTV--- 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TCS--EEEEGGGSSCCCSSCCCCEEEEEESS---
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC--EEEecCCHHHHHhhcCCCccEEEECC---
Confidence 4999996 478889999988899999999999888887652 321 11111111111 12245799876432
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.. ..++.+.+.|+++|++++...
T Consensus 220 --g~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 220 --GD--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp --CH--HHHHHHHHTEEEEEEEEECCC
T ss_pred --Cc--HHHHHHHHHHhcCCEEEEEec
Confidence 22 378999999999999988653
No 375
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.72 E-value=0.92 Score=41.15 Aligned_cols=90 Identities=17% Similarity=0.058 Sum_probs=58.0
Q ss_pred CCCEEEEEC-CC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCCCCCccEEEecc
Q 016921 158 RPKNVVDVG-CG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiG-cG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V~~~~ 234 (380)
++.+||=+| +| .|..+..+++..|++|++++ ++..++.+++ .|.. .++..+-.+ +.-.-..+|+|+-.-
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~g~D~v~d~~ 223 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE---QCINYHEEDFLLAISTPVDAVIDLV 223 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS---EEEETTTSCHHHHCCSCEEEEEESS
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC---EEEeCCCcchhhhhccCCCEEEECC
Confidence 489999996 55 68888889988899999998 4544555544 3431 222221111 110114689887532
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 235 SGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
. . ..+..+.+.|++||++++.
T Consensus 224 g------~-~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 224 G------G-DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp C------H-HHHHHHGGGEEEEEEEEEC
T ss_pred C------c-HHHHHHHHhccCCCEEEEe
Confidence 2 1 2348899999999999875
No 376
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.64 E-value=0.5 Score=43.41 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=59.7
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC------CCCCCCccE
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ------PFPDGQFDL 229 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~fD~ 229 (380)
++.+||=+|+|. |..+..+++.. +++|+++|.+++-++.+++ .|. ..++...-.+. -.....+|.
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga---~~~i~~~~~~~~~~v~~~t~g~g~d~ 235 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGA---DVTINSGDVNPVDEIKKITGGLGVQS 235 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTC---SEEEEC-CCCHHHHHHHHTTSSCEEE
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCC---eEEEeCCCCCHHHHhhhhcCCCCceE
Confidence 489999999985 45556666655 8899999999988776654 332 12221111111 012235666
Q ss_pred EEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 230 VWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
++.... -...+....+.|+++|.+++..
T Consensus 236 ~~~~~~------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 236 AIVCAV------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEECCS------CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEecc------CcchhheeheeecCCceEEEEe
Confidence 654321 2467889999999999988865
No 377
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.56 E-value=3.1 Score=36.59 Aligned_cols=78 Identities=15% Similarity=0.162 Sum_probs=54.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (380)
+.+||=.| |+|.++..+++.+ |.+|++++.++..++...+.+...+.+.++.++.+|+.+.. +. -+
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 56788777 4566666666654 88999999998877766666665555456888999987642 00 13
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+|+.+..+.
T Consensus 111 ~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 111 GVDICINNAGLA 122 (279)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988766543
No 378
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.46 E-value=0.43 Score=43.90 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=62.2
Q ss_pred CCCCEEEEECC-C-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCCcc
Q 016921 157 KRPKNVVDVGC-G-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFD 228 (380)
Q Consensus 157 ~~~~~vLDiGc-G-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD 228 (380)
.++.+||-+|+ | .|..+..+++..|++|+++ .+++.++.+++ .|. ..+. +-.+.. .....+|
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~----lGa----~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD----LGA----TPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH----HTS----EEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH----cCC----CEec-cCCCHHHHHHHHhcCCCce
Confidence 35899999993 3 6888888888779999999 88888777654 232 2222 222210 1234799
Q ss_pred EEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 229 LVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 229 ~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+|+-.-. . ..+..+.+.|+++|++++..
T Consensus 219 ~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 219 LVYDTLG-----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEESSC-----T--HHHHHHHHHEEEEEEEEESC
T ss_pred EEEECCC-----c--HHHHHHHHHHhcCCeEEEEc
Confidence 8875432 1 46888999999999988754
No 379
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.40 E-value=0.24 Score=45.94 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=60.1
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCC-CCCCCCccEEEecc
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVG-DALQQ-PFPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~-~~~~~~fD~V~~~~ 234 (380)
++.+||=+|+| .|..+..+++..|++|+++|.+++.++.+++ +.|.. . ++.. +...+ .. .+.+|+|+-.-
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~-~--vi~~~~~~~~~~~-~~g~D~vid~~ 252 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGAD-D--YVIGSDQAKMSEL-ADSLDYVIDTV 252 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCS-C--EEETTCHHHHHHS-TTTEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCc-e--eeccccHHHHHHh-cCCCCEEEECC
Confidence 48999999987 4777778887779999999999877766552 12321 1 1211 10000 01 14699988543
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 235 SGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.-. ..++.+.+.|++||++++...
T Consensus 253 g~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 253 PVH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CSC------CCSHHHHTTEEEEEEEEECSC
T ss_pred CCh------HHHHHHHHHhccCCEEEEeCC
Confidence 321 135667889999999888643
No 380
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.34 E-value=0.29 Score=45.52 Aligned_cols=93 Identities=27% Similarity=0.278 Sum_probs=60.0
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC---CCCCCCCccEEEec
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ---QPFPDGQFDLVWSM 233 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~~fD~V~~~ 233 (380)
++.+||=+|+| .|..+..+++..|++|+++|.+++.++.+++. .|. ..++ |..+ +.-..+.+|+|+-.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa---~~v~--~~~~~~~~~~~~~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGA---DSFL--VSRDQEQMQAAAGTLDGIIDT 258 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCC---SEEE--ETTCHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCC---ceEE--eccCHHHHHHhhCCCCEEEEC
Confidence 48899999986 37777778877789999999998777665432 232 1222 2211 10001469998865
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 234 ESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
-.... .++.+.+.|+++|+++....
T Consensus 259 ~g~~~------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 259 VSAVH------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp CSSCC------CSHHHHHHEEEEEEEEECCC
T ss_pred CCcHH------HHHHHHHHHhcCCEEEEEcc
Confidence 43221 24567789999999887643
No 381
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.17 E-value=2.9 Score=36.68 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=52.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEeccc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMES 235 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 235 (380)
..+||=.|+ |.++..+++.+ |.+|++++.++........ .+++++.+|+.++. -..+|+|+....
T Consensus 5 ~~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 5 TGTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CCEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC--CTTCCEEEECCC
T ss_pred cCcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc--cCCCCEEEECCC
Confidence 368999994 88888887766 7899999998765433221 36899999998866 467899987665
Q ss_pred cCCCCC
Q 016921 236 GEHMPD 241 (380)
Q Consensus 236 l~~~~~ 241 (380)
.....+
T Consensus 73 ~~~~~~ 78 (286)
T 3ius_A 73 PDSGGD 78 (286)
T ss_dssp CBTTBC
T ss_pred cccccc
Confidence 544333
No 382
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.06 E-value=0.13 Score=48.01 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=59.4
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+||=+|+| .|..+..++...|++|+++|.+++.++.+++.... .+.....+..++.-.-..+|+|+..-..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 35899999986 45555666666688999999999888777654421 2222222211110001258999865443
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.....+.-+.++..+.++|||.++...
T Consensus 241 ~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 241 PGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp TTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 321111112345677899999776643
No 383
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.00 E-value=1.1 Score=36.78 Aligned_cols=92 Identities=21% Similarity=0.235 Sum_probs=55.3
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----C-CCCCccEEE
Q 016921 159 PKNVVDVGCGI-GGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----F-PDGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~-~~~~fD~V~ 231 (380)
+.+|+=+|+|. |......+... +..|+++|.+++.++.+++ . .+.++.+|..+.. . .-..+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 56899998863 44333333344 7889999999987766543 2 3556777765421 1 234689888
Q ss_pred eccccCCCCCH--HHHHHHHHHhcCCCcEEEEEe
Q 016921 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~ 263 (380)
... ++. ...+-...+.+.|++.+++..
T Consensus 111 ~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 111 LAM-----PHHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp ECC-----SSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EeC-----CChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 642 222 223334556667777777643
No 384
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.92 E-value=1.6 Score=39.63 Aligned_cols=79 Identities=15% Similarity=0.091 Sum_probs=56.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.+||=.|++ |.++..+++.+ |.+|++++.++..++.+.+.+...+...++.++.+|+.+.. + ..+
T Consensus 8 ~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 8 GRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 6788888865 44555555554 89999999999888877776665553347899999998742 0 114
Q ss_pred CccEEEeccccCC
Q 016921 226 QFDLVWSMESGEH 238 (380)
Q Consensus 226 ~fD~V~~~~~l~~ 238 (380)
.+|+++.+..+..
T Consensus 87 ~id~lv~nAg~~~ 99 (319)
T 3ioy_A 87 PVSILCNNAGVNL 99 (319)
T ss_dssp CEEEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 7899998766543
No 385
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=90.89 E-value=0.28 Score=45.08 Aligned_cols=69 Identities=12% Similarity=0.149 Sum_probs=51.5
Q ss_pred CCEEEEECCCcChHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCCccEEEe
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFG---AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVWS 232 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~---~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~~ 232 (380)
..+++|+-||.|.+...+.+. | ..|.++|+++...+.-+.+. +...+...|+.++. ++...+|+++.
T Consensus 3 ~~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~------~~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNF------PETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHC------TTSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CCEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhC------CCCceeccccccCCHHHhccCCCCEEEe
Confidence 458999999999999998876 5 35789999999887777655 23456778888763 22236899986
Q ss_pred cc
Q 016921 233 ME 234 (380)
Q Consensus 233 ~~ 234 (380)
..
T Consensus 76 gp 77 (333)
T 4h0n_A 76 SP 77 (333)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 386
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.63 E-value=0.064 Score=48.52 Aligned_cols=91 Identities=19% Similarity=0.211 Sum_probs=60.7
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCCCCCCCCccEEEecc
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQQPFPDGQFDLVWSME 234 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~~~ 234 (380)
++.+||-+|+ |.|..+..+++..|++|+++|.+++.++.+++ .|. . .++..+- .++.-.-+.+|+|+. .
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga--~-~~~~~~~~~~~~~~~~~~d~vid-~ 196 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGA--E-EAATYAEVPERAKAWGGLDLVLE-V 196 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTC--S-EEEEGGGHHHHHHHTTSEEEEEE-C
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC--C-EEEECCcchhHHHHhcCceEEEE-C
Confidence 4899999997 46778888888778999999999887777654 232 1 1222110 111000056999886 3
Q ss_pred ccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 235 SGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 235 ~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.- ..++.+.+.|+++|++++..
T Consensus 197 g~-------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 197 RG-------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp SC-------TTHHHHHTTEEEEEEEEEC-
T ss_pred CH-------HHHHHHHHhhccCCEEEEEe
Confidence 22 25788899999999988754
No 387
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.52 E-value=1 Score=42.93 Aligned_cols=96 Identities=16% Similarity=0.105 Sum_probs=63.0
Q ss_pred CCCCEEEEECC-C-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC--------------
Q 016921 157 KRPKNVVDVGC-G-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-------------- 220 (380)
Q Consensus 157 ~~~~~vLDiGc-G-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------------- 220 (380)
.++.+||=+|+ | .|..+..+++..|+++++++.+++.++.+++ .|...-+.....|..+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccchhhhH
Confidence 45899999996 3 5778888888779999999999988887754 33211111111111000
Q ss_pred ------CCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 221 ------PFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 221 ------~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
......+|+|+-... ...++.+.+.|++||.+++..
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTG-------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSC-------HHHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHHhCCCceEEEECCC-------chHHHHHHHHHhcCCEEEEEe
Confidence 000246898875432 136788899999999998865
No 388
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.50 E-value=0.29 Score=44.65 Aligned_cols=93 Identities=14% Similarity=0.205 Sum_probs=60.2
Q ss_pred CC-EEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC-CC-C-CCCCCCccEEEe
Q 016921 159 PK-NVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA-LQ-Q-PFPDGQFDLVWS 232 (380)
Q Consensus 159 ~~-~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~-~-~~~~~~fD~V~~ 232 (380)
+. +||-+|+ |.|..+..+++..|++|++++.+++.++.+++ .|.. .+ +-..+. .+ . ....+.+|+|+-
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~-~~-i~~~~~~~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK-EV-LAREDVMAERIRPLDKQRWAAAVD 222 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS-EE-EECC---------CCSCCEEEEEE
T ss_pred CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCc-EE-EecCCcHHHHHHHhcCCcccEEEE
Confidence 54 8999997 46888888888778999999999877777654 3321 11 111111 01 0 122346998875
Q ss_pred ccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 233 MESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 233 ~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
.-.- ..+..+.+.|++||++++...
T Consensus 223 ~~g~-------~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 223 PVGG-------RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CSTT-------TTHHHHHHTEEEEEEEEECSC
T ss_pred CCcH-------HHHHHHHHhhccCCEEEEEee
Confidence 4321 247788899999999987643
No 389
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=90.37 E-value=1.9 Score=37.71 Aligned_cols=104 Identities=19% Similarity=0.143 Sum_probs=63.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (380)
+.+||=.|+ +|.++..+++.+ |.+|++++.++...+...+.+.......++.++.+|+.+.. +. -+
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 7 GKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 567887775 555666665554 89999999998766554444422111236888999987641 00 13
Q ss_pred CccEEEeccccCCCCCHHH-----------HHHHHHHhcCC-----CcEEEEEe
Q 016921 226 QFDLVWSMESGEHMPDKSK-----------FVSELARVTAP-----AGTIIIVT 263 (380)
Q Consensus 226 ~fD~V~~~~~l~~~~~~~~-----------~l~~~~r~Lkp-----gG~l~~~~ 263 (380)
.+|+++.+.......++.. ..+.+.+.++. +|.++...
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~is 139 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS 139 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeC
Confidence 6899988776554444433 23445555543 57776654
No 390
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.28 E-value=2.6 Score=37.61 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=66.5
Q ss_pred CCEEEEECCCcC-hHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGIG-GSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGtG-~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.+||=.|++.| .++..+++.+ |++|+.++.++...+.+++.....+ ++.++.+|+.+.. + .-
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhc
Confidence 778998887643 2444444433 8999999999766555555544433 5889999998742 0 11
Q ss_pred CCccEEEeccccCC-------C--CC---H-----------HHHHHHHHHhcCCCcEEEEEec
Q 016921 225 GQFDLVWSMESGEH-------M--PD---K-----------SKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 225 ~~fD~V~~~~~l~~-------~--~~---~-----------~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+.+|+++.+..+.. + .+ + -.+++.+.+.++.+|.++....
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 47899997765542 1 01 1 1255667778888888887653
No 391
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.16 E-value=0.13 Score=48.17 Aligned_cols=101 Identities=16% Similarity=0.164 Sum_probs=57.8
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|+=+|+| .|..+..++...|++|+++|.++..++.+++.. +. .+.....+..++.-.-...|+|+..-..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 47899999986 355555555556889999999998777665432 21 2222211111110001357988864322
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.....+.-+.++..+.+||||.++..-
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 211111112456778899999877654
No 392
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.59 E-value=1.3 Score=42.91 Aligned_cols=88 Identities=18% Similarity=0.202 Sum_probs=57.2
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|+=+|+| .|......++.+|++|+++|.++...+.+++ .| ..+ .+..+. -...|+|+..-.-
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~----~G----a~~--~~l~e~---l~~aDvVi~atgt 339 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM----EG----FDV--VTVEEA---IGDADIVVTATGN 339 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CEE--CCHHHH---GGGCSEEEECSSS
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC----CEE--ecHHHH---HhCCCEEEECCCC
Confidence 48999999987 3555555555568999999999987766543 23 222 222221 1357999876433
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.++-+ .+..+.+|+||+++...
T Consensus 340 ~~~i~-----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 340 KDIIM-----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp SCSBC-----HHHHHHSCTTCEEEECS
T ss_pred HHHHH-----HHHHHhcCCCcEEEEeC
Confidence 33222 35677899999987754
No 393
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=89.57 E-value=1.5 Score=41.48 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=36.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc------CCEEEEEeCCHHHHHHHHHHHHH
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF------GAKCQGITLSPVQAQRANALAAA 203 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~------~~~v~giD~s~~~~~~a~~~~~~ 203 (380)
..+|+|+|.|+|.++..+.+.+ ..+++.||+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 4689999999999998887654 24799999999988777777654
No 394
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=89.52 E-value=0.53 Score=42.44 Aligned_cols=69 Identities=20% Similarity=0.162 Sum_probs=51.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CC-CCCccEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKFGAK---CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FP-DGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~~~~---v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~-~~~fD~V 230 (380)
.+.+++|+=||.|.+...+.+. |.+ |.++|+++...+.-+.+. +...+..+|+.++. ++ ...+|++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~------~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH------QGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT------TTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC------CCCceeCCChHHccHHHhcccCCcCEE
Confidence 4779999999999999988776 543 589999998877666543 24567889998863 11 1468999
Q ss_pred Eec
Q 016921 231 WSM 233 (380)
Q Consensus 231 ~~~ 233 (380)
+..
T Consensus 88 ~gg 90 (295)
T 2qrv_A 88 IGG 90 (295)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
No 395
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.35 E-value=1.9 Score=37.64 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=66.1
Q ss_pred CCEEEEECCCcC-hHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 016921 159 PKNVVDVGCGIG-GSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (380)
Q Consensus 159 ~~~vLDiGcGtG-~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (380)
+.+||=.|++.| .++..+++.+ |++|+.++.+....+...+.....+. .++.++.+|+.+.. +. .
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 678888887632 2444444433 89999999887655555555544332 37899999998752 00 1
Q ss_pred CCccEEEeccccCC-------C--CCH---H-----------HHHHHHHHhcCCCcEEEEEec
Q 016921 225 GQFDLVWSMESGEH-------M--PDK---S-----------KFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 225 ~~fD~V~~~~~l~~-------~--~~~---~-----------~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+.+|+++.+..+.. + .+. . .+++.+...++++|.++....
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 46898887665433 1 111 1 245667777888888887653
No 396
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.08 E-value=3.7 Score=36.10 Aligned_cols=102 Identities=19% Similarity=0.136 Sum_probs=67.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS------------PVQAQRANALAAARGLADKVSFQVGDALQQP-- 221 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 221 (380)
+.+||=.|++ |.++..+++.+ |++|+.+|.+ ...++.+...+...+ .++.++.+|+.+..
T Consensus 10 gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 10 DKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHHH
Confidence 6778877765 45555555554 8999999987 666666666555544 57899999988742
Q ss_pred ---CC-----CCCccEEEeccccCCCC------CHH-----------HHHHHHHHhcCCCcEEEEEe
Q 016921 222 ---FP-----DGQFDLVWSMESGEHMP------DKS-----------KFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 222 ---~~-----~~~fD~V~~~~~l~~~~------~~~-----------~~l~~~~r~LkpgG~l~~~~ 263 (380)
+. -+.+|+++.+..+.... ++. .+++.+...++.+|.++...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 00 14789998776553321 122 24456677777888877764
No 397
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.01 E-value=5.3 Score=30.48 Aligned_cols=90 Identities=18% Similarity=0.111 Sum_probs=52.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~ 231 (380)
+.+|+=+|+| ..+..+++.+ +.+|+++|.++..++..++. . .+.++.+|..+.. ..-..+|+|+
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I----DALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C----SSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c----CcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 5689888874 5555554433 78999999998876544321 1 3556777765421 1124689888
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEE
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIII 261 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~ 261 (380)
..... ......+..+.+.+.++ .+++
T Consensus 75 ~~~~~---~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 75 AVTGK---EEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp ECCSC---HHHHHHHHHHHHHTTCC-CEEE
T ss_pred EeeCC---chHHHHHHHHHHHcCCC-EEEE
Confidence 75321 12233455566667775 4444
No 398
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.95 E-value=0.57 Score=44.13 Aligned_cols=98 Identities=14% Similarity=0.220 Sum_probs=59.7
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC------C-------CC--
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL------Q-------QP-- 221 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~------~-------~~-- 221 (380)
++.+|+=+|+| .|..+..++...|++|+++|.++..++.+++ .| ..+...+.. . ++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----~G----~~~~~~~~~~~~d~~~~~~ya~e~s~~ 260 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS----LG----AKFIAVEDEEFKAAETAGGYAKEMSGE 260 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH----TT----CEECCCCC-----------------CH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cC----Cceeecccccccccccccchhhhcchh
Confidence 47899999999 4777777777779999999999987776654 22 222222110 0 00
Q ss_pred --------CC--CCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 222 --------FP--DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 222 --------~~--~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+. -...|+|+..-.+..-..+.-+-+++.+.+|||..++-.-
T Consensus 261 ~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 261 YQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 00 0357988864322211112223368889999998776543
No 399
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.91 E-value=0.2 Score=46.72 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=55.6
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCCCCCccEEEecccc
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFPDGQFDLVWSMESG 236 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 236 (380)
++.+|+=+|+| .|..+..++...|++|+++|.++..++.+++.. +. .+.....+..++.-.-..+|+|+..-..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 46899999985 344444445445899999999998776654322 21 2222222211111001357988765433
Q ss_pred CCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 237 EHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 237 ~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.....+.-+.+++.+.+|+||.++...
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEe
Confidence 211111113467788899999877653
No 400
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.81 E-value=0.28 Score=44.82 Aligned_cols=92 Identities=17% Similarity=0.159 Sum_probs=61.4
Q ss_pred CC-EEEEECC--CcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEc-CC--CCC-CCCCCCccEEE
Q 016921 159 PK-NVVDVGC--GIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVG-DA--LQQ-PFPDGQFDLVW 231 (380)
Q Consensus 159 ~~-~vLDiGc--GtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~--~~~-~~~~~~fD~V~ 231 (380)
+. +||-+|+ |.|..+..+++..|++|++++.+++.++.+++ .|.. .++.. +. ... ....+.+|+|+
T Consensus 150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~~~~~~d~vi 222 (330)
T 1tt7_A 150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGAS---EVISREDVYDGTLKALSKQQWQGAV 222 (330)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCS---EEEEHHHHCSSCCCSSCCCCEEEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc---EEEECCCchHHHHHHhhcCCccEEE
Confidence 54 8999997 46788888888778999999999877777754 2321 11211 11 111 12234699887
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
-... . ..+..+.+.|++||++++...
T Consensus 223 d~~g-----~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 223 DPVG-----G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp ESCC-----T--HHHHHHHTTEEEEEEEEECCC
T ss_pred ECCc-----H--HHHHHHHHhhcCCCEEEEEec
Confidence 5432 2 368889999999999988653
No 401
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.73 E-value=0.17 Score=47.25 Aligned_cols=97 Identities=20% Similarity=0.255 Sum_probs=59.0
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC--C----------------
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA--L---------------- 218 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~---------------- 218 (380)
++.+|+=+|+| .|..+..++...|++|+++|.++..++.+++ .| ..|...+. .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lG----a~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VG----AQWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TT----CEECCCC-------------CHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC----CeEEeccccccccccchhhhhHHHHhh
Confidence 47899999998 4667777777679999999999987776654 22 23322110 0
Q ss_pred ---CCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 219 ---QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 219 ---~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
.+.-.-...|+|+..-.+..-..+.-+-+++.+.+|||+.++-.
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 00000156899986432211111111336888999998876654
No 402
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.36 E-value=1.7 Score=37.87 Aligned_cols=103 Identities=13% Similarity=0.031 Sum_probs=65.4
Q ss_pred CCCEEEEECCC-cChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----C
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----P 223 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~ 223 (380)
++.+||=.|++ +|.++..+++.+ |++|+.++.+....+..++.....+ ++.++.+|+.+.. + .
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 47889988874 355666666554 8999999988655555554444433 4788999988742 0 1
Q ss_pred CCCccEEEeccccCCC----------CCH---H-----------HHHHHHHHhcCCCcEEEEEe
Q 016921 224 DGQFDLVWSMESGEHM----------PDK---S-----------KFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 224 ~~~fD~V~~~~~l~~~----------~~~---~-----------~~l~~~~r~LkpgG~l~~~~ 263 (380)
-+..|+++.+..+... .+. . .+++.+.+.++++|.++...
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 2478999877655331 111 1 24455666677788877765
No 403
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.31 E-value=3.8 Score=36.38 Aligned_cols=102 Identities=18% Similarity=0.174 Sum_probs=64.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHH-HHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPV-QAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~-~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.+||=.|++ |.++..+++.+ |++|+.++.+.. ..+...+.....+ .++.++.+|+.+.. + .-
T Consensus 47 gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 47 GKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 6788888855 45555555554 899999998765 3344444444333 57899999998742 0 01
Q ss_pred CCccEEEeccccCCC-C-----C---HH-----------HHHHHHHHhcCCCcEEEEEe
Q 016921 225 GQFDLVWSMESGEHM-P-----D---KS-----------KFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 225 ~~fD~V~~~~~l~~~-~-----~---~~-----------~~l~~~~r~LkpgG~l~~~~ 263 (380)
+.+|+++.+....+. . + +. .+++.+.+.++.+|.++...
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 468999876544321 1 1 11 35566777788889877764
No 404
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.17 E-value=2.9 Score=35.57 Aligned_cols=75 Identities=16% Similarity=0.143 Sum_probs=50.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCe-EEEEcCCCC-CCCCCCCccEEEec
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKV-SFQVGDALQ-QPFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v-~~~~~d~~~-~~~~~~~fD~V~~~ 233 (380)
+.+||=.| |+|.++..+++.+ |.+|++++.++..++.... .++ .++.+|+.+ +.-.-+.+|+|+..
T Consensus 21 ~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 21 GMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 77888777 5677777766655 8899999998876543322 257 899999862 11112468999987
Q ss_pred cccCCCCCH
Q 016921 234 ESGEHMPDK 242 (380)
Q Consensus 234 ~~l~~~~~~ 242 (380)
.......++
T Consensus 92 ag~~~~~~~ 100 (236)
T 3e8x_A 92 AGSGPHTGA 100 (236)
T ss_dssp CCCCTTSCH
T ss_pred CCCCCCCCc
Confidence 665544443
No 405
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.88 E-value=1.9 Score=40.75 Aligned_cols=90 Identities=16% Similarity=0.157 Sum_probs=61.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~ 231 (380)
..+|+=+|+| .++..+++.+ +..|+++|.+++.++.+++ . .+.++.+|+.+.. ..-...|+|+
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 5678888885 3444444433 8899999999999887764 2 3667899988742 2235688887
Q ss_pred eccccCCCCCH--HHHHHHHHHhcCCCcEEEEEe
Q 016921 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+.. ++. ...+-...+.+.|...+++-.
T Consensus 74 v~~-----~~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 74 NAI-----DDPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp ECC-----SSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ECC-----CChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 643 233 344566777788887777754
No 406
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=87.84 E-value=2.2 Score=37.13 Aligned_cols=99 Identities=16% Similarity=0.168 Sum_probs=64.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC----------CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF----------PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------~~~ 225 (380)
+.++|=.|++ |.++..+++.+ |++|+.+|.++..++...+.. + .++.++.+|+.+..- .-+
T Consensus 8 gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 8 GKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 6788888855 45555555554 899999999988776655544 2 468899999887420 014
Q ss_pred CccEEEeccccCCCC-----CH---H-----------HHHHHHHHhcCCCcEEEEEe
Q 016921 226 QFDLVWSMESGEHMP-----DK---S-----------KFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 226 ~fD~V~~~~~l~~~~-----~~---~-----------~~l~~~~r~LkpgG~l~~~~ 263 (380)
.+|+++.+..+.... +. . .+.+.+...++.+|.++...
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 789988776554321 11 1 24455666677788877764
No 407
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=87.69 E-value=5.7 Score=34.81 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=65.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS-PVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.++|=.|++ |.++..+++.+ |++|+.++.. ....+...+.+...+ .++.++.+|+.+.. + .-
T Consensus 31 gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 31 GKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 6788888865 45555555544 8899998654 455555555555444 47889999988742 0 01
Q ss_pred CCccEEEeccccCCCC-----C---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 016921 225 GQFDLVWSMESGEHMP-----D---KS-----------KFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 225 ~~fD~V~~~~~l~~~~-----~---~~-----------~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+..|+++.+..+.... + +. .+++.+.+.++++|.++...-
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 3789998776554321 1 11 356677788888898887653
No 408
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.30 E-value=4.1 Score=36.23 Aligned_cols=103 Identities=20% Similarity=0.253 Sum_probs=65.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC--HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS--PVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----P 223 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~ 223 (380)
+.+||=.|++ |.++..+++.+ |++|+.+|.+ ....+...+.....+ .++.++.+|+.+.. + .
T Consensus 49 ~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 6778888854 55666666554 8999999986 344555555554444 47889999987742 0 0
Q ss_pred CCCccEEEeccccCC-CC-----CH---H-----------HHHHHHHHhcCCCcEEEEEec
Q 016921 224 DGQFDLVWSMESGEH-MP-----DK---S-----------KFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 224 ~~~fD~V~~~~~l~~-~~-----~~---~-----------~~l~~~~r~LkpgG~l~~~~~ 264 (380)
-+..|+++.+..... .. +. . .+++.+...++.+|.++...-
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 147899987766533 11 11 1 345666777888898887653
No 409
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=87.17 E-value=0.3 Score=45.57 Aligned_cols=94 Identities=13% Similarity=0.069 Sum_probs=59.1
Q ss_pred CCCCEEEEEC-CC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC---CCCCCccEEE
Q 016921 157 KRPKNVVDVG-CG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP---FPDGQFDLVW 231 (380)
Q Consensus 157 ~~~~~vLDiG-cG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~fD~V~ 231 (380)
.++.+||=+| +| .|..+..+++..|++|++++ ++..++.+++ .|.. .++..+-.+.. .....+|+|+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK----LGAD---DVIDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEEETTSSCHHHHHHTSCCBSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH----cCCC---EEEECCchHHHHHHhhcCCCCEEE
Confidence 4589999999 34 68888888887789999998 6665555532 3421 12221111110 0124699887
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
-.-. .....+....+.|++||++++..
T Consensus 254 d~~g-----~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 254 DNVG-----GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ESSC-----TTHHHHGGGGBCSSSCCEEEESC
T ss_pred ECCC-----ChhhhhHHHHHhhcCCcEEEEeC
Confidence 5432 22235677888999999988754
No 410
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.81 E-value=2 Score=38.43 Aligned_cols=103 Identities=20% Similarity=0.169 Sum_probs=65.3
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 016921 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (380)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (380)
+.+||=.|++. +.++..+++.+ |++|+.+|.++...+...+.....+ ++.++.+|+.+.. +. -
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67889888753 34455554444 8999999999765555555444433 4688999988742 00 1
Q ss_pred CCccEEEeccccCCC---------CC---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 016921 225 GQFDLVWSMESGEHM---------PD---KS-----------KFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 225 ~~fD~V~~~~~l~~~---------~~---~~-----------~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+.+|+++.+..+... .+ +. .+.+.+...++.+|.++....
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 478999987655421 11 11 245566667778888887653
No 411
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=86.79 E-value=4.2 Score=35.60 Aligned_cols=78 Identities=12% Similarity=0.010 Sum_probs=56.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 225 (380)
++.+|=-|++. ..+..+++.+ |++|+.+|.+++.++.+.+.+.+.+ .++.++.+|+.+.. -.-+
T Consensus 9 gKvalVTGas~-GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 9 GKTALVTGSAR-GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 66677666554 4555555555 8999999999999888877777665 46888999987731 1236
Q ss_pred CccEEEeccccCCC
Q 016921 226 QFDLVWSMESGEHM 239 (380)
Q Consensus 226 ~fD~V~~~~~l~~~ 239 (380)
..|+++.+-.+.+.
T Consensus 86 ~iDiLVNNAG~~~~ 99 (255)
T 4g81_D 86 HVDILINNAGIQYR 99 (255)
T ss_dssp CCCEEEECCCCCCC
T ss_pred CCcEEEECCCCCCC
Confidence 79999987665543
No 412
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=86.55 E-value=6.6 Score=34.93 Aligned_cols=76 Identities=20% Similarity=0.181 Sum_probs=51.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS------------PVQAQRANALAAARGLADKVSFQVGDALQQP-- 221 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 221 (380)
+.++|=.|++. .++..+++.+ |++|+++|.+ ++.++...+.+...+ .++.++.+|+.+..
T Consensus 28 gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 28 GKVAFITGAAR-GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDAM 104 (299)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHH
Confidence 67788888655 4555555544 8999999987 666666665555544 57899999998742
Q ss_pred ---C-----CCCCccEEEeccccC
Q 016921 222 ---F-----PDGQFDLVWSMESGE 237 (380)
Q Consensus 222 ---~-----~~~~fD~V~~~~~l~ 237 (380)
+ .-+..|+++.+..+.
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCC
Confidence 0 014789988765543
No 413
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=86.48 E-value=1.9 Score=37.58 Aligned_cols=102 Identities=16% Similarity=0.133 Sum_probs=64.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF----GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~----~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (380)
+.+||=.| |+|.++..+++.+ |.+|++++.++...+...+.+...+ .++.++.+|+.+.. +. .
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 56777666 5666666655433 7899999999887766666555443 46889999987742 00 1
Q ss_pred CCccEEEeccccCCCC--------CHH-----------HHHHHHHHhcCCCcEEEEEe
Q 016921 225 GQFDLVWSMESGEHMP--------DKS-----------KFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 225 ~~fD~V~~~~~l~~~~--------~~~-----------~~l~~~~r~LkpgG~l~~~~ 263 (380)
+.+|+|+.+....... +.. .+++.+.+.++++|+++...
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 3789988765443211 111 24455556666677777754
No 414
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=86.43 E-value=2.2 Score=39.49 Aligned_cols=93 Identities=12% Similarity=0.071 Sum_probs=61.1
Q ss_pred CCCCEEEEECC-C-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-----CCCCCCccE
Q 016921 157 KRPKNVVDVGC-G-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-----PFPDGQFDL 229 (380)
Q Consensus 157 ~~~~~vLDiGc-G-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~ 229 (380)
.++.+||=+|+ | .|..+..+++..|++|+++. ++.-++.+++ .|. -.++...-.++ ...++.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa---~~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGA---EEVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTC---SEEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCC---cEEEECCCchHHHHHHHHccCCccE
Confidence 35899999998 3 78889999988899999885 7776666654 342 12232221111 011245998
Q ss_pred EEeccccCCCCCHHHHHHHHHHhc-CCCcEEEEEe
Q 016921 230 VWSMESGEHMPDKSKFVSELARVT-APAGTIIIVT 263 (380)
Q Consensus 230 V~~~~~l~~~~~~~~~l~~~~r~L-kpgG~l~~~~ 263 (380)
|+-.-. . ...++.+.+.| ++||++++..
T Consensus 235 v~d~~g-----~-~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALDCIT-----N-VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEESSC-----S-HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEECCC-----c-hHHHHHHHHHhhcCCCEEEEEe
Confidence 875322 1 35678888899 6999988764
No 415
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=86.39 E-value=2.9 Score=38.94 Aligned_cols=97 Identities=18% Similarity=0.091 Sum_probs=65.9
Q ss_pred CCEEEEECCCcChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCC-CeEEEEcCCCCCCCCCCCccEEEeccccC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLAD-KVSFQVGDALQQPFPDGQFDLVWSMESGE 237 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 237 (380)
+.+||.|+.+.|.++..++.. .++.+.-|-......+.++..+++++ ++.+... ... ..+.||+|+... -.
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~---~~~~~~~v~~~l-pk 110 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD---YPQQPGVVLIKV-PK 110 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC---CCSSCSEEEEEC-CS
T ss_pred CCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc---cccCCCEEEEEc-CC
Confidence 568999999999999888753 34555445555556667777777754 3665432 222 246799887632 23
Q ss_pred CCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 238 HMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 238 ~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+.......+..+...|+||+.+++..
T Consensus 111 ~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 111 TLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp CHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 33345677888999999999988765
No 416
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.24 E-value=0.38 Score=45.12 Aligned_cols=42 Identities=21% Similarity=0.338 Sum_probs=33.0
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANA 199 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~ 199 (380)
++.+|+=+|+| .|..+..++..+|++|+++|.++.-.+.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 48899999998 4666777777778999999999876655543
No 417
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.21 E-value=5 Score=35.56 Aligned_cols=77 Identities=14% Similarity=0.117 Sum_probs=54.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC-C--------C--CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ-P--------F--PD 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--------~--~~ 224 (380)
+.+||=.|++ |.++..+++.+ |++|++++.++...+.+.+.+...+. .++.++.+|+.+. . + ..
T Consensus 12 ~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 12 RRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 5677766654 55666666555 89999999999887777666655432 4799999999875 2 0 01
Q ss_pred CCccEEEeccccC
Q 016921 225 GQFDLVWSMESGE 237 (380)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (380)
+.+|+++.+..+.
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4799999876654
No 418
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=85.45 E-value=5 Score=35.15 Aligned_cols=78 Identities=21% Similarity=0.273 Sum_probs=53.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC------------HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS------------PVQAQRANALAAARGLADKVSFQVGDALQQP-- 221 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 221 (380)
+.+||=.|++ |.++..+++.+ |++|+++|.+ ++.++...+.....+ .++.++.+|+.+..
T Consensus 13 gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 13 GKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRESL 89 (278)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHHH
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHH
Confidence 6778877754 55555555554 8999999987 666666555555444 47999999998742
Q ss_pred ---CC-----CCCccEEEeccccCCC
Q 016921 222 ---FP-----DGQFDLVWSMESGEHM 239 (380)
Q Consensus 222 ---~~-----~~~fD~V~~~~~l~~~ 239 (380)
+. -+..|+++.+..+...
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 10 1478999987666543
No 419
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=85.13 E-value=10 Score=33.05 Aligned_cols=103 Identities=22% Similarity=0.184 Sum_probs=66.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeC-CHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITL-SPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~-s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.++|=.|++ |.++..+++.+ |++|+.++. +....+...+.+...+ .++.++.+|+.+.. + .-
T Consensus 18 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 18 GKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 6677777754 55566665554 889998775 4555555555555544 57899999998742 0 01
Q ss_pred CCccEEEeccccCCCC-----C---HH-----------HHHHHHHHhcCCCcEEEEEec
Q 016921 225 GQFDLVWSMESGEHMP-----D---KS-----------KFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 225 ~~fD~V~~~~~l~~~~-----~---~~-----------~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+..|+++.+..+.... + +. .+.+.+.+.++++|.+++...
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 4689998766554331 1 11 255677888888998887654
No 420
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.02 E-value=0.33 Score=45.84 Aligned_cols=41 Identities=22% Similarity=0.355 Sum_probs=32.9
Q ss_pred CCCEEEEECCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRAN 198 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~ 198 (380)
++.+|+=+|+| .|..+..++..+|++|+++|.++..++.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 47899999998 466677777777899999999987766653
No 421
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.89 E-value=4.3 Score=35.52 Aligned_cols=75 Identities=20% Similarity=0.180 Sum_probs=55.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 225 (380)
++.+|=-|++.| ++..+++.+ |++|+.+|.+++.++...+.+...+ .++.++.+|+.+.. -.-+
T Consensus 7 gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 7 NKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 677887786655 455555444 8999999999999988888777665 47899999998742 0125
Q ss_pred CccEEEecccc
Q 016921 226 QFDLVWSMESG 236 (380)
Q Consensus 226 ~fD~V~~~~~l 236 (380)
..|+++.+-.+
T Consensus 84 ~iDiLVNNAGi 94 (254)
T 4fn4_A 84 RIDVLCNNAGI 94 (254)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 78998876654
No 422
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=84.76 E-value=6.4 Score=31.00 Aligned_cols=94 Identities=10% Similarity=0.072 Sum_probs=57.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCC-HHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLS-PVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLV 230 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V 230 (380)
..+|+=+|+ |..+..+++.+ +..|+++|.+ ++..+...... +..+.++.+|..+.. ..-+..|+|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 456887876 56666665544 7899999997 44443333221 135788999987631 112468888
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
++...- ......+....+.+.|...++..
T Consensus 76 i~~~~~---d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 76 LALSDN---DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp EECSSC---HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EEecCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 865321 12344555667777777777664
No 423
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=84.27 E-value=16 Score=32.65 Aligned_cols=79 Identities=18% Similarity=0.096 Sum_probs=51.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEE-EcCCCCCC-CC--CCCccEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQ-VGDALQQP-FP--DGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~-~~--~~~fD~V 230 (380)
++.+||=.| |+|.++..+++.+ |.+|++++.++...+.....+.... ..++.++ .+|+.+.. +. -..+|+|
T Consensus 10 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 367888777 5677777776655 7899999998876554444332211 1468888 78987642 11 1368999
Q ss_pred EeccccCC
Q 016921 231 WSMESGEH 238 (380)
Q Consensus 231 ~~~~~l~~ 238 (380)
+.......
T Consensus 88 ih~A~~~~ 95 (342)
T 1y1p_A 88 AHIASVVS 95 (342)
T ss_dssp EECCCCCS
T ss_pred EEeCCCCC
Confidence 87665543
No 424
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.20 E-value=2.9 Score=33.19 Aligned_cols=93 Identities=22% Similarity=0.223 Sum_probs=51.6
Q ss_pred CCCEEEEECCCcChHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEE
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKK---FGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~---~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V 230 (380)
++.+|+=+|+| .++..+++. .+..|+++|.++..++.++. ...+.++.+|..+.. ..-..+|+|
T Consensus 18 ~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 18 KSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred CCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHcCcccCCEE
Confidence 47899999985 444443333 37899999999865543220 123556667754421 112468888
Q ss_pred EeccccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 231 WSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 231 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
+....- ......+..+.+.+.+...++..
T Consensus 89 i~~~~~---~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 89 FAFTND---DSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp EECSSC---HHHHHHHHHHHHHTSCCSEEEEE
T ss_pred EEEeCC---cHHHHHHHHHHHHHCCCCeEEEE
Confidence 765321 12233444455555555555554
No 425
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=83.98 E-value=1.6 Score=40.08 Aligned_cols=91 Identities=16% Similarity=0.033 Sum_probs=56.8
Q ss_pred CEEEEE-CCC-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC------CCCCCccEEE
Q 016921 160 KNVVDV-GCG-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP------FPDGQFDLVW 231 (380)
Q Consensus 160 ~~vLDi-GcG-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~fD~V~ 231 (380)
.+||=. |+| .|..+..+++..|++|+++|.+++.++.+++ .|. ..++..+-.++. .....+|+|+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~Ga---~~~~~~~~~~~~~~v~~~~~~~g~D~vi 238 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----IGA---AHVLNEKAPDFEATLREVMKAEQPRIFL 238 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----HTC---SEEEETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---CEEEECCcHHHHHHHHHHhcCCCCcEEE
Confidence 466643 443 5667777777779999999999988887764 232 122222211110 0013699888
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEEEec
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 264 (380)
-...- ..+..+.+.|++||++++...
T Consensus 239 d~~g~-------~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 239 DAVTG-------PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp ESSCH-------HHHHHHHHHSCTTCEEEECCC
T ss_pred ECCCC-------hhHHHHHhhhcCCCEEEEEec
Confidence 54321 235788899999999998653
No 426
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=83.97 E-value=0.68 Score=42.28 Aligned_cols=56 Identities=20% Similarity=0.293 Sum_probs=39.9
Q ss_pred CCeEEEEcCCCC-CC-CCCCCccEEEeccccCC-----C---------CCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 208 DKVSFQVGDALQ-QP-FPDGQFDLVWSMESGEH-----M---------PDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 208 ~~v~~~~~d~~~-~~-~~~~~fD~V~~~~~l~~-----~---------~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.+..++++|..+ +. +++++||+|++.=-... . ......++++.++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 357788999765 32 56789999998521111 1 124678899999999999998864
No 427
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=83.91 E-value=0.9 Score=41.98 Aligned_cols=96 Identities=11% Similarity=0.107 Sum_probs=55.8
Q ss_pred CC-CEEEEECC-C-cChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC---CCCC-----C---C
Q 016921 158 RP-KNVVDVGC-G-IGGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA---LQQP-----F---P 223 (380)
Q Consensus 158 ~~-~~vLDiGc-G-tG~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~-----~---~ 223 (380)
++ .+||=+|+ | .|..+..+++..|++++++..+++.+...++.+++.|.. .++..+- .++. . .
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHHhhcc
Confidence 48 99999986 4 688888888877999888875544311111122233421 1222110 1110 0 1
Q ss_pred CCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 224 DGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 224 ~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.+.+|+|+-.-. . .... .+.+.|++||++++..
T Consensus 243 ~~g~Dvvid~~G-----~-~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 243 GGEAKLALNCVG-----G-KSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp TCCEEEEEESSC-----H-HHHH-HHHHTSCTTCEEEECC
T ss_pred CCCceEEEECCC-----c-hhHH-HHHHHhccCCEEEEec
Confidence 246998875422 1 2233 7789999999988864
No 428
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=83.88 E-value=1.5 Score=39.82 Aligned_cols=66 Identities=14% Similarity=0.052 Sum_probs=48.6
Q ss_pred CEEEEECCCcChHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCCC-CCCccEEEec
Q 016921 160 KNVVDVGCGIGGSSRYLAKKFGAK-CQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPFP-DGQFDLVWSM 233 (380)
Q Consensus 160 ~~vLDiGcGtG~~~~~l~~~~~~~-v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~V~~~ 233 (380)
.+|||+=||.|.+..-+.+. |.+ +.++|+++...+.-+.+. + -.++.+|+.++... -..+|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhhCCcccEEEec
Confidence 47999999999999988775 554 569999998877766543 1 35688998886421 1368988863
No 429
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.81 E-value=11 Score=32.17 Aligned_cols=74 Identities=12% Similarity=0.121 Sum_probs=49.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-CCCCcc
Q 016921 158 RPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-PDGQFD 228 (380)
Q Consensus 158 ~~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-~~~~fD 228 (380)
++.+||=.|+ +|.++..+++.+ |.+|+.++.++..++...+.. ..++.+...|+.+.. + ..+..|
T Consensus 13 ~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 13 TGKTSLITGA-SSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 4778887665 455666666554 899999999988776655443 246889999987631 1 124689
Q ss_pred EEEeccccC
Q 016921 229 LVWSMESGE 237 (380)
Q Consensus 229 ~V~~~~~l~ 237 (380)
+++.+..+.
T Consensus 87 ~li~~Ag~~ 95 (249)
T 3f9i_A 87 ILVCNAGIT 95 (249)
T ss_dssp EEEECCC--
T ss_pred EEEECCCCC
Confidence 998776543
No 430
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=83.38 E-value=2 Score=38.11 Aligned_cols=99 Identities=19% Similarity=0.148 Sum_probs=65.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 225 (380)
++.+|=-|++.| ++..+++.+ |++|+.+|.+++.++.+.+.+ + .++.++.+|+.+.. -.-+
T Consensus 29 gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 29 AKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 677787776655 555555554 899999999998877654433 3 46788899987742 0125
Q ss_pred CccEEEeccccCCCC--------CHH-----------HHHHHHHHhcCCCcEEEEEe
Q 016921 226 QFDLVWSMESGEHMP--------DKS-----------KFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 226 ~fD~V~~~~~l~~~~--------~~~-----------~~l~~~~r~LkpgG~l~~~~ 263 (380)
..|+++.+....... +++ ...+.+.+.|+.+|.++...
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 789988766554331 122 24566777788888877764
No 431
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.26 E-value=8.5 Score=36.38 Aligned_cols=102 Identities=17% Similarity=0.140 Sum_probs=60.6
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
-.++.+.+..+.. -.+.+|+=+|+|. |......++.+|++|+++|+++.....+.. .| .. ..++.
T Consensus 205 s~~~gi~rat~~~----L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~----~G----~~--v~~Le 270 (435)
T 3gvp_A 205 SILDGLKRTTDMM----FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM----DG----FR--LVKLN 270 (435)
T ss_dssp HHHHHHHHHHCCC----CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CE--ECCHH
T ss_pred HHHHHHHHhhCce----ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH----cC----CE--eccHH
Confidence 3444444444322 2488999999984 555555555569999999999865443332 22 22 22332
Q ss_pred CCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 219 QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+. -...|+|+....-.++-+ .+..+.+|+|++++-.-
T Consensus 271 ea---l~~ADIVi~atgt~~lI~-----~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 271 EV---IRQVDIVITCTGNKNVVT-----REHLDRMKNSCIVCNMG 307 (435)
T ss_dssp HH---TTTCSEEEECSSCSCSBC-----HHHHHHSCTTEEEEECS
T ss_pred HH---HhcCCEEEECCCCcccCC-----HHHHHhcCCCcEEEEec
Confidence 21 135798888533333322 35678899998776653
No 432
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=83.01 E-value=2.5 Score=38.82 Aligned_cols=92 Identities=18% Similarity=0.167 Sum_probs=53.4
Q ss_pred CCCEEEEECC--CcChHHHHHHHHcCCEEEEEe-CCHH---HHHHHHHHHHHcCCCCCeEEEEc------CCCCCCCCCC
Q 016921 158 RPKNVVDVGC--GIGGSSRYLAKKFGAKCQGIT-LSPV---QAQRANALAAARGLADKVSFQVG------DALQQPFPDG 225 (380)
Q Consensus 158 ~~~~vLDiGc--GtG~~~~~l~~~~~~~v~giD-~s~~---~~~~a~~~~~~~~~~~~v~~~~~------d~~~~~~~~~ 225 (380)
++.+||=+|+ |.|..+..+++..|++++++. .++. ..+.++ +.|.. .++.. ++.+..-..+
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~---~vi~~~~~~~~~~~~~~~~~~ 239 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAE---HVITEEELRRPEMKNFFKDMP 239 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCS---EEEEHHHHHSGGGGGTTSSSC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCc---EEEecCcchHHHHHHHHhCCC
Confidence 4899999996 468888899987788766554 4322 233333 33421 22221 1111110112
Q ss_pred CccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 226 QFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 226 ~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.+|+|+-.- .. .....+.+.|++||++++..
T Consensus 240 ~~Dvvid~~-----g~--~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 240 QPRLALNCV-----GG--KSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp CCSEEEESS-----CH--HHHHHHHTTSCTTCEEEECC
T ss_pred CceEEEECC-----Cc--HHHHHHHHhhCCCCEEEEEe
Confidence 489887432 12 12346789999999988763
No 433
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=82.69 E-value=7.6 Score=32.42 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=58.7
Q ss_pred EEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCCccEEEecccc
Q 016921 161 NVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSMESG 236 (380)
Q Consensus 161 ~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~V~~~~~l 236 (380)
+||=.| |+|.++..+++.+ |.+|++++.++..+... ...++.++.+|+.+... .-+.+|+|+.....
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 566666 5677777776665 88999999998755422 12478999999887531 11468998877655
Q ss_pred CCCCC----HHHHHHHHHHhcCC-CcEEEEE
Q 016921 237 EHMPD----KSKFVSELARVTAP-AGTIIIV 262 (380)
Q Consensus 237 ~~~~~----~~~~l~~~~r~Lkp-gG~l~~~ 262 (380)
.+-+. .......+.+.++. |+++++.
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 32211 23344566666654 4566655
No 434
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=82.61 E-value=2.5 Score=36.89 Aligned_cols=102 Identities=19% Similarity=0.158 Sum_probs=63.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEE-eCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGI-TLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~gi-D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (380)
+.+||=.|++. .++..+++.+ |++|+.+ +.+....+...+.+...+ .++.++.+|+.+.. +. -
T Consensus 8 ~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 8 NRTIVVAGAGR-DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 67788777654 4555555544 8899988 666666665555554443 46889999988742 00 1
Q ss_pred CCccEEEeccccC-C---CC--CH---H-----------HHHHHHHHhcCCCcEEEEEe
Q 016921 225 GQFDLVWSMESGE-H---MP--DK---S-----------KFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 225 ~~fD~V~~~~~l~-~---~~--~~---~-----------~~l~~~~r~LkpgG~l~~~~ 263 (380)
+..|+++.+.... . +. +. . .+.+.+.+.++++|.++...
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 4789988765433 1 11 11 1 24455666676778877764
No 435
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=81.82 E-value=4.5 Score=34.09 Aligned_cols=89 Identities=15% Similarity=0.140 Sum_probs=55.3
Q ss_pred EEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEEEec
Q 016921 161 NVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVWSM 233 (380)
Q Consensus 161 ~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~~~ 233 (380)
+|+=+|+ |.++..+++.+ +..|+++|.+++.++...+. .++.++.+|+.+.. ..-...|+|++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 4666775 56666666554 78999999999877654321 14678999987631 112468988864
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCcEEEE
Q 016921 234 ESGEHMPDKSKFVSELARVTAPAGTIII 261 (380)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~~ 261 (380)
..- ......+....+.+.+...++.
T Consensus 73 ~~~---d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 73 TPR---DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp CSC---HHHHHHHHHHHHHTSCCCEEEE
T ss_pred cCC---cHHHHHHHHHHHHHcCCCeEEE
Confidence 311 1123445556666666666655
No 436
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=81.79 E-value=5.5 Score=35.01 Aligned_cols=76 Identities=16% Similarity=0.137 Sum_probs=53.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC---------CCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF---------PDGQ 226 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------~~~~ 226 (380)
+.++|=.|+ +|.++..+++.+ |++|+.+|.++..++...+.+...+ .++.++.+|+.+... ..+.
T Consensus 33 gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 33 GRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 667776664 456666666555 8999999999877776666665544 578999999987520 0147
Q ss_pred ccEEEeccccC
Q 016921 227 FDLVWSMESGE 237 (380)
Q Consensus 227 fD~V~~~~~l~ 237 (380)
+|+++.+..+.
T Consensus 110 iD~lvnnAg~~ 120 (275)
T 4imr_A 110 VDILVINASAQ 120 (275)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89998776653
No 437
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=81.76 E-value=11 Score=33.38 Aligned_cols=77 Identities=21% Similarity=0.257 Sum_probs=51.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEcCCCCCC-----CC-----C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGL-ADKVSFQVGDALQQP-----FP-----D 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~-----~~-----~ 224 (380)
+.+||=.| |+|.++..+++.+ |++|++++.++..++...+.+...+. ..++.++.+|+.+.. +. -
T Consensus 26 ~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 26 GKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 56677666 5566666666655 89999999998877766555544331 116889999987742 10 1
Q ss_pred CCccEEEecccc
Q 016921 225 GQFDLVWSMESG 236 (380)
Q Consensus 225 ~~fD~V~~~~~l 236 (380)
+.+|+++.+..+
T Consensus 105 g~iD~lvnnAG~ 116 (297)
T 1xhl_A 105 GKIDILVNNAGA 116 (297)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368998876654
No 438
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=81.53 E-value=5.1 Score=35.06 Aligned_cols=102 Identities=18% Similarity=0.135 Sum_probs=64.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEe-CCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGIT-LSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD-~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.++|=.|++. .++..+++.+ |++|+.++ .+....+...+.+...+ .++.++.+|+.+.. + .-
T Consensus 27 ~k~~lVTGas~-GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 27 NKVAIVTGASR-GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp CCEEEEESCSS-HHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67788777654 4455554444 88998874 45555555555555444 47889999998742 0 01
Q ss_pred CCccEEEeccccCCCC-----C---HH-----------HHHHHHHHhcCCCcEEEEEe
Q 016921 225 GQFDLVWSMESGEHMP-----D---KS-----------KFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 225 ~~fD~V~~~~~l~~~~-----~---~~-----------~~l~~~~r~LkpgG~l~~~~ 263 (380)
+..|+++.+..+.... + ++ .+++.+.+.++++|.++...
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 4789998776554321 1 11 24566777788888887765
No 439
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.15 E-value=7.5 Score=33.36 Aligned_cols=75 Identities=17% Similarity=0.100 Sum_probs=53.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.+||=.|+ +|.++..+++++ |++|+.+|.++..++...+.+...+ .++.++.+|+.+.. + .-+
T Consensus 9 ~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 9 NKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 677887775 455566666554 8999999999988887777666544 47889999998742 0 013
Q ss_pred CccEEEecccc
Q 016921 226 QFDLVWSMESG 236 (380)
Q Consensus 226 ~fD~V~~~~~l 236 (380)
.+|+++.+..+
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78999877654
No 440
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=81.05 E-value=13 Score=30.66 Aligned_cols=93 Identities=10% Similarity=0.115 Sum_probs=57.4
Q ss_pred EEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCCC-CCCCccEEEecccc
Q 016921 161 NVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQPF-PDGQFDLVWSMESG 236 (380)
Q Consensus 161 ~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~V~~~~~l 236 (380)
+||=.| |+|..+..+++.+ |.+|++++.++..+... . .++.++.+|+.+... .-..+|+|+.....
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-------H--KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-------C--SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-------c--CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 566666 5667676666655 78999999987654321 1 468999999887531 01458998876554
Q ss_pred CCC--CCHHHHHHHHHHhcCCC--cEEEEEe
Q 016921 237 EHM--PDKSKFVSELARVTAPA--GTIIIVT 263 (380)
Q Consensus 237 ~~~--~~~~~~l~~~~r~Lkpg--G~l~~~~ 263 (380)
..- .......+.+.+.++.. +++++..
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 321 22334455566666543 5666543
No 441
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=80.98 E-value=5.4 Score=35.51 Aligned_cols=88 Identities=17% Similarity=0.063 Sum_probs=51.9
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE-cCCCCCCCCCCCccEEEeccc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV-GDALQQPFPDGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~fD~V~~~~~ 235 (380)
.+.+|+=||+|. |......+..+|.+|++.|.++...+.+. ..+ +.+.. .+..+. -...|+|+..-.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g----~~~~~~~~l~~~---l~~aDvVi~~~p 222 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA----EMG----MEPFHISKAAQE---LRDVDVCINTIP 222 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----SEEEEGGGHHHH---TTTCSEEEECCS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCC----CeecChhhHHHH---hcCCCEEEECCC
Confidence 488999999873 44444444445889999999987544332 222 33321 122111 146899887654
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
.+.+ +. +....+|||+.++-.
T Consensus 223 ~~~i-~~-----~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 223 ALVV-TA-----NVLAEMPSHTFVIDL 243 (293)
T ss_dssp SCCB-CH-----HHHHHSCTTCEEEEC
T ss_pred hHHh-CH-----HHHHhcCCCCEEEEe
Confidence 4332 22 345678999876654
No 442
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=80.31 E-value=9.8 Score=36.16 Aligned_cols=103 Identities=17% Similarity=0.117 Sum_probs=61.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCC
Q 016921 139 VRMIEETLRFAGVSEDPTKRPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDA 217 (380)
Q Consensus 139 ~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 217 (380)
+.+++.+.+..+.. -.+.+|+=+|+|. |......++.+|++|++.|+++.....+. ..| +.+ .++
T Consensus 231 eslvdgI~Ratg~~----L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~----~~G----~~v--v~L 296 (464)
T 3n58_A 231 ESLVDGIRRGTDVM----MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA----MDG----FEV--VTL 296 (464)
T ss_dssp HHHHHHHHHHHCCC----CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH----HTT----CEE--CCH
T ss_pred HHHHHHHHHhcCCc----ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH----hcC----cee--ccH
Confidence 44555555554432 2489999999984 55555555556999999999986543332 122 222 233
Q ss_pred CCCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEEe
Q 016921 218 LQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 218 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~~ 263 (380)
.+. -...|+|+....-.|+- -.+....+|+|++|+-+-
T Consensus 297 eEl---L~~ADIVv~atgt~~lI-----~~e~l~~MK~GAILINvG 334 (464)
T 3n58_A 297 DDA---ASTADIVVTTTGNKDVI-----TIDHMRKMKDMCIVGNIG 334 (464)
T ss_dssp HHH---GGGCSEEEECCSSSSSB-----CHHHHHHSCTTEEEEECS
T ss_pred HHH---HhhCCEEEECCCCcccc-----CHHHHhcCCCCeEEEEcC
Confidence 222 13578888654333332 246778889999887653
No 443
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=80.27 E-value=9.1 Score=33.35 Aligned_cols=76 Identities=18% Similarity=0.093 Sum_probs=53.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.+||=.|+ +|.++..+++.+ |.+|+++|.++..++...+.+...+ .++.++.+|+.+.. + .-+
T Consensus 31 ~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 31 GEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 677887774 566676666655 8999999999887776666555443 47899999987642 0 014
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+|+.+..+.
T Consensus 108 ~iD~li~~Ag~~ 119 (272)
T 1yb1_A 108 DVSILVNNAGVV 119 (272)
T ss_dssp CCSEEEECCCCC
T ss_pred CCcEEEECCCcC
Confidence 689998776553
No 444
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=79.59 E-value=1.4 Score=38.62 Aligned_cols=21 Identities=10% Similarity=0.320 Sum_probs=17.9
Q ss_pred HHHHHHHHHhcCCCcEEEEEe
Q 016921 243 SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 243 ~~~l~~~~r~LkpgG~l~~~~ 263 (380)
...+.++.++|+|||.+++..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEc
Confidence 567888999999999998863
No 445
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.51 E-value=10 Score=32.93 Aligned_cols=75 Identities=19% Similarity=0.134 Sum_probs=53.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.++|=.|++.| ++..+++.+ |++|+.+|.+++.++...+.+...+ .++.++.+|+.+.. + .-+
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 11 DKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 678888886654 444444444 8999999999988887777766554 57899999998742 0 124
Q ss_pred CccEEEecccc
Q 016921 226 QFDLVWSMESG 236 (380)
Q Consensus 226 ~fD~V~~~~~l 236 (380)
..|+++.+...
T Consensus 88 ~id~lv~nAg~ 98 (264)
T 3ucx_A 88 RVDVVINNAFR 98 (264)
T ss_dssp CCSEEEECCCS
T ss_pred CCcEEEECCCC
Confidence 78999876544
No 446
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=79.44 E-value=10 Score=32.50 Aligned_cols=76 Identities=18% Similarity=0.157 Sum_probs=52.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (380)
+.+||=.| |+|.++..+++.+ |.+|+++|.++..++...+.+...+ .++.++.+|+.+.. +. .+
T Consensus 13 ~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 13 NRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 66788777 4566666666655 8899999999877666555554443 46899999987742 10 13
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+|+.+....
T Consensus 90 ~id~vi~~Ag~~ 101 (260)
T 3awd_A 90 RVDILVACAGIC 101 (260)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988765543
No 447
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=79.19 E-value=11 Score=32.94 Aligned_cols=103 Identities=17% Similarity=0.141 Sum_probs=63.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHH-HHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQ-AQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~-~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (380)
+.+||=.| |+|.++..+++.+ |++|++++.+... .+...+.+...+ .++.++.+|+.+.. +. -
T Consensus 29 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 29 GKVALVTG-AGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56677666 4566676666655 8899999987543 343334444333 46888999987632 00 1
Q ss_pred CCccEEEeccccCCCC-----CH---H-----------HHHHHHHHhcCCCcEEEEEec
Q 016921 225 GQFDLVWSMESGEHMP-----DK---S-----------KFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 225 ~~fD~V~~~~~l~~~~-----~~---~-----------~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+.+|+++.+..+.... +. . .+++.+.+.|+.+|.++...-
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 4689998776554321 11 1 244667777777788877653
No 448
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=78.94 E-value=5.6 Score=37.14 Aligned_cols=80 Identities=16% Similarity=0.173 Sum_probs=55.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---C-CEEEEEeCCHHHHHHHHHHHHHcC--CCCCeEEEEcCCCCCC-----CCCCCc
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---G-AKCQGITLSPVQAQRANALAAARG--LADKVSFQVGDALQQP-----FPDGQF 227 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~-~~v~giD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~-----~~~~~f 227 (380)
+.+||=.| |+|..+..+++.+ | .+|+++|.++..+....+.+.... .+.++.++.+|+.+.. +....+
T Consensus 35 ~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 67888777 5677777777765 6 699999999987766555443321 1247899999988742 123578
Q ss_pred cEEEeccccCCC
Q 016921 228 DLVWSMESGEHM 239 (380)
Q Consensus 228 D~V~~~~~l~~~ 239 (380)
|+|+...+..|.
T Consensus 114 D~Vih~Aa~~~~ 125 (399)
T 3nzo_A 114 DYVLNLSALKHV 125 (399)
T ss_dssp SEEEECCCCCCG
T ss_pred CEEEECCCcCCC
Confidence 999977666554
No 449
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=78.80 E-value=9.8 Score=32.96 Aligned_cols=76 Identities=16% Similarity=0.003 Sum_probs=46.3
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCC
Q 016921 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPD 224 (380)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~ 224 (380)
+.+||=.|++. |.++..+++.+ |++|++++.++...+..++.....+ +..++.+|+.+.. -.-
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56788888652 66666666655 8999999988622122222222222 3467888987631 112
Q ss_pred CCccEEEeccccC
Q 016921 225 GQFDLVWSMESGE 237 (380)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (380)
+.+|+++.+..+.
T Consensus 86 g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 86 PKFDGFVHSIGFA 98 (265)
T ss_dssp SSEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4789998876554
No 450
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=78.48 E-value=6.5 Score=31.48 Aligned_cols=114 Identities=15% Similarity=0.168 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE
Q 016921 136 AAQVRMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQV 214 (380)
Q Consensus 136 ~~~~~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~ 214 (380)
.+|+..++..+....-- ..-|||+|-|.|..=..|.+.+ +..|.++|-.-.... .-.|+.-.+++
T Consensus 24 taQR~~L~~a~~~v~~~------~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp--------~~~P~~e~~il 89 (174)
T 3iht_A 24 VSQRACLEHAIAQTAGL------SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHP--------DSTPPEAQLIL 89 (174)
T ss_dssp HHHHHHHHHHHHHTTTC------CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCG--------GGCCCGGGEEE
T ss_pred HHHHHHHHHHHHHhcCC------CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCC--------CCCCchHheec
Confidence 34455555555555422 5679999999999999999988 889999996321100 01233445677
Q ss_pred cCCCCC-CC----CCCCccEEEeccccCCCCCHH-----HHHHHHHHhcCCCcEEEEEec
Q 016921 215 GDALQQ-PF----PDGQFDLVWSMESGEHMPDKS-----KFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 215 ~d~~~~-~~----~~~~fD~V~~~~~l~~~~~~~-----~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+|+.+. +. -..+.-++++....++ ++.+ .+-.-+..+|.|||.++-...
T Consensus 90 Gdi~~tL~~~~~r~g~~a~LaHaD~G~g~-~~~d~a~a~~lsplI~~~la~GGi~vS~~p 148 (174)
T 3iht_A 90 GDIRETLPATLERFGATASLVHADLGGHN-REKNDRFARLISPLIEPHLAQGGLMVSSDR 148 (174)
T ss_dssp SCHHHHHHHHHHHHCSCEEEEEECCCCSC-HHHHHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred ccHHHHHHHHHHhcCCceEEEEeecCCCC-cchhHHHHHhhhHHHHHHhcCCcEEEeCCc
Confidence 776653 21 0233444444443332 2222 122356778999998887653
No 451
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=78.28 E-value=11 Score=33.44 Aligned_cols=76 Identities=20% Similarity=0.100 Sum_probs=55.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (380)
+.+||=.|++ |.++..+++.+ |.+|++++.++..++...+.+...+ .++.++.+|+.+.. +. .+
T Consensus 31 gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 31 GRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 6788888766 45555555554 8999999999998888777776554 47899999998742 00 14
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+++.+..+.
T Consensus 108 ~id~lvnnAg~~ 119 (301)
T 3tjr_A 108 GVDVVFSNAGIV 119 (301)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 789999876654
No 452
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=78.22 E-value=1.7 Score=34.02 Aligned_cols=71 Identities=18% Similarity=0.236 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHHcCCCCCeEEEEcC---CCCCCCCCCCccEEEeccccC-C-CCCHHHHHHHHHHhcCCCcEEEE
Q 016921 190 SPVQAQRANALAAARGLADKVSFQVGD---ALQQPFPDGQFDLVWSMESGE-H-MPDKSKFVSELARVTAPAGTIII 261 (380)
Q Consensus 190 s~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~~~~~~~fD~V~~~~~l~-~-~~~~~~~l~~~~r~LkpgG~l~~ 261 (380)
.|+.++.++......+- ..+.....| .....+++++||.|+...--. . ..-+..++..+++.|||||.|..
T Consensus 21 ~pe~le~~k~~~~~~~~-~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 21 TPELVENTKAQAASKKV-KFVDQFLINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SHHHHHHHHHHHHHTTE-EEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CHHHHHHHHHhhhcccc-chhhHHHHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 46666777666654210 112333333 111246789999998754322 2 22347899999999999999876
No 453
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=78.19 E-value=6.6 Score=35.08 Aligned_cols=88 Identities=14% Similarity=0.120 Sum_probs=52.4
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEE-cCCCCCCCCCCCccEEEeccc
Q 016921 158 RPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQV-GDALQQPFPDGQFDLVWSMES 235 (380)
Q Consensus 158 ~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~fD~V~~~~~ 235 (380)
.+.+|+=||+|. |......+..+|.+|++.|.++...+.+.+ .+ +.... .+..+. -...|+|+..-.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g----~~~~~~~~l~~~---l~~aDvVi~~~p 224 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE----MG----LVPFHTDELKEH---VKDIDICINTIP 224 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT----CEEEEGGGHHHH---STTCSEEEECCS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CC----CeEEchhhHHHH---hhCCCEEEECCC
Confidence 488999999863 444444444458899999999865443322 22 23221 122221 246899988665
Q ss_pred cCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 236 GEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 236 l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
.+.+ +. +....+|||+.++-.
T Consensus 225 ~~~i-~~-----~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 225 SMIL-NQ-----TVLSSMTPKTLILDL 245 (300)
T ss_dssp SCCB-CH-----HHHTTSCTTCEEEEC
T ss_pred hhhh-CH-----HHHHhCCCCCEEEEE
Confidence 5333 32 345778999876554
No 454
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=78.01 E-value=9.8 Score=32.50 Aligned_cols=76 Identities=17% Similarity=0.134 Sum_probs=52.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (380)
+.+||=.| |+|.++..+++.+ |.+|+++|.++..++...+.+...+ .++.++.+|+.+.. +. .+
T Consensus 11 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 11 GKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 56777665 6677777777765 7899999999887766555554433 46888999987632 10 13
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+|+.+....
T Consensus 88 ~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 88 KVDILVNNAGGG 99 (255)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789988765543
No 455
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=77.28 E-value=10 Score=33.19 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=53.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.++|=.|++ |.++..+++.+ |++|++++.++..++...+.+...+ .++.++.+|+.+.. + .-+
T Consensus 24 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 24 PQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp -CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6678888855 45555555544 8999999999988877776665544 47899999988742 0 014
Q ss_pred CccEEEeccccCC
Q 016921 226 QFDLVWSMESGEH 238 (380)
Q Consensus 226 ~fD~V~~~~~l~~ 238 (380)
..|+++.+..+..
T Consensus 101 ~id~lv~nAg~~~ 113 (279)
T 3sju_A 101 PIGILVNSAGRNG 113 (279)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCcEEEECCCCCC
Confidence 7899987765543
No 456
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=76.93 E-value=20 Score=31.40 Aligned_cols=74 Identities=18% Similarity=0.150 Sum_probs=49.9
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.+||=.|++ |.++..+++.+ |++|+++|.++..++...+.. + .++.++.+|+.+.. + .-+
T Consensus 29 gk~vlVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 29 GKVAIVTGAG-AGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G--CGAAACRVDVSDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TCEEEETTTT-STHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C--SSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 6677777755 44555555544 899999999988766655443 2 46889999988742 0 014
Q ss_pred CccEEEeccccCC
Q 016921 226 QFDLVWSMESGEH 238 (380)
Q Consensus 226 ~fD~V~~~~~l~~ 238 (380)
..|+++.+..+.+
T Consensus 103 ~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 103 GVDKLVANAGVVH 115 (277)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899998766544
No 457
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=76.55 E-value=15 Score=33.05 Aligned_cols=88 Identities=20% Similarity=0.278 Sum_probs=55.2
Q ss_pred CCEEEEECCCc--ChHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-CCCCCCCccEEEec
Q 016921 159 PKNVVDVGCGI--GGSSRYLAKKFGA--KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ-QPFPDGQFDLVWSM 233 (380)
Q Consensus 159 ~~~vLDiGcGt--G~~~~~l~~~~~~--~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V~~~ 233 (380)
..+|.=||+|. |.++..+.+. |. +|++.|.+++.++.+++ .|. +.-...|..+ . -...|+|+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~----~G~---~~~~~~~~~~~~---~~~aDvVila 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD----LGI---IDEGTTSIAKVE---DFSPDFVMLS 101 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH----TTS---CSEEESCTTGGG---GGCCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHH----CCC---cchhcCCHHHHh---hccCCEEEEe
Confidence 46899999873 3344445443 66 99999999987776543 332 1112233332 1 2357988875
Q ss_pred cccCCCCCHHHHHHHHHHhcCCCcEEE
Q 016921 234 ESGEHMPDKSKFVSELARVTAPAGTII 260 (380)
Q Consensus 234 ~~l~~~~~~~~~l~~~~r~LkpgG~l~ 260 (380)
--.. ....+++++...+++|..++
T Consensus 102 vp~~---~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 102 SPVR---TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp SCGG---GHHHHHHHHHHHSCTTCEEE
T ss_pred CCHH---HHHHHHHHHhhccCCCcEEE
Confidence 4322 34678889999999887554
No 458
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=76.50 E-value=15 Score=31.47 Aligned_cols=76 Identities=17% Similarity=0.109 Sum_probs=52.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (380)
+.++|=.|++ |.++..+++.+ |++|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -+
T Consensus 7 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 7 GKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5678877754 55666665554 8999999999887776666555443 46889999987742 00 14
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+++.+..+.
T Consensus 84 ~id~lv~nAg~~ 95 (247)
T 2jah_A 84 GLDILVNNAGIM 95 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689988765543
No 459
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=76.18 E-value=11 Score=35.71 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=51.0
Q ss_pred CCEEEEECCCc-Ch-HHHHHHHHcCCEEEEEeCCHHHHHHHHHH------------HHHcCCCCCeEEEEcCCCCCCCCC
Q 016921 159 PKNVVDVGCGI-GG-SSRYLAKKFGAKCQGITLSPVQAQRANAL------------AAARGLADKVSFQVGDALQQPFPD 224 (380)
Q Consensus 159 ~~~vLDiGcGt-G~-~~~~l~~~~~~~v~giD~s~~~~~~a~~~------------~~~~~~~~~v~~~~~d~~~~~~~~ 224 (380)
+.++-=||.|. |. .+..+++. |.+|+|+|++++.++..++. +++.-...++.+. .|+
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td~------- 81 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TTP------- 81 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SSC-------
T ss_pred CCccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cch-------
Confidence 56677777763 33 23334443 88999999999988766541 0000001234433 232
Q ss_pred CCccEEEeccccCC------CCC---HHHHHHHHHHhcCCCcEEEE
Q 016921 225 GQFDLVWSMESGEH------MPD---KSKFVSELARVTAPAGTIII 261 (380)
Q Consensus 225 ~~fD~V~~~~~l~~------~~~---~~~~l~~~~r~LkpgG~l~~ 261 (380)
..-|+|+..-.-.. -+| ...+.+.+.+.|++|..++.
T Consensus 82 ~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~ 127 (431)
T 3ojo_A 82 EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV 127 (431)
T ss_dssp CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE
T ss_pred hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE
Confidence 23677775432221 112 35566788888988764443
No 460
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=76.04 E-value=35 Score=32.75 Aligned_cols=99 Identities=16% Similarity=0.163 Sum_probs=58.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcC
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGD 216 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 216 (380)
.+++.+.+..+.. -.+.+|+=+|+| ..+..+++.+ |++|+++|+++.....+.. .+ . ...+
T Consensus 250 sl~dgi~r~tg~~----L~GKtVvVtGaG--gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~----~g----~--dv~~ 313 (488)
T 3ond_A 250 SLPDGLMRATDVM----IAGKVAVVAGYG--DVGKGCAAALKQAGARVIVTEIDPICALQATM----EG----L--QVLT 313 (488)
T ss_dssp HHHHHHHHHHCCC----CTTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----C--EECC
T ss_pred HHHHHHHHHcCCc----ccCCEEEEECCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----hC----C--ccCC
Confidence 3444444444432 248899999987 4455444443 8999999999876655443 22 2 2233
Q ss_pred CCCCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 217 ALQQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 217 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
..+. ....|+|+....-.++-+ .+..+.+|+|+.++-.
T Consensus 314 lee~---~~~aDvVi~atG~~~vl~-----~e~l~~mk~gaiVvNa 351 (488)
T 3ond_A 314 LEDV---VSEADIFVTTTGNKDIIM-----LDHMKKMKNNAIVCNI 351 (488)
T ss_dssp GGGT---TTTCSEEEECSSCSCSBC-----HHHHTTSCTTEEEEES
T ss_pred HHHH---HHhcCEEEeCCCChhhhh-----HHHHHhcCCCeEEEEc
Confidence 3332 246898876544333322 2357778998876654
No 461
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=75.99 E-value=11 Score=35.60 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=58.0
Q ss_pred HHHHHHHHHcCCCCCCCCCCCEEEEECCCc-ChHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC
Q 016921 140 RMIEETLRFAGVSEDPTKRPKNVVDVGCGI-GGSSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL 218 (380)
Q Consensus 140 ~~~~~ll~~~~~~~~~~~~~~~vLDiGcGt-G~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 218 (380)
.+++.+.+..+.. -.+.+|+=+|.|. |......++.+|++|+++|+++.....+.. .| ..+ .++.
T Consensus 196 slldgi~ratg~~----L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~----~G----~~~--~sL~ 261 (436)
T 3h9u_A 196 SLVDGIKRATDVM----IAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAM----EG----YQV--LLVE 261 (436)
T ss_dssp HHHHHHHHHHCCC----CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT----CEE--CCHH
T ss_pred HHHHHHHHhcCCc----ccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHH----hC----Cee--cCHH
Confidence 3444444444332 2488999999874 555555555569999999999876544432 22 222 2332
Q ss_pred CCCCCCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 219 QQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 219 ~~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
+. -...|+|+....-.++-+ .+..+.+|+|++++-.
T Consensus 262 ea---l~~ADVVilt~gt~~iI~-----~e~l~~MK~gAIVINv 297 (436)
T 3h9u_A 262 DV---VEEAHIFVTTTGNDDIIT-----SEHFPRMRDDAIVCNI 297 (436)
T ss_dssp HH---TTTCSEEEECSSCSCSBC-----TTTGGGCCTTEEEEEC
T ss_pred HH---HhhCCEEEECCCCcCccC-----HHHHhhcCCCcEEEEe
Confidence 22 135788886443333322 2456778888766553
No 462
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=75.90 E-value=40 Score=29.49 Aligned_cols=60 Identities=15% Similarity=0.021 Sum_probs=42.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEe-CCHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGIT-LSPVQAQRANALAA-ARGLADKVSFQVGDALQQP 221 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD-~s~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~ 221 (380)
+.++|=.| |+|.++..+++.+ |++|+.++ .++..++...+.+. ..+ .++.++.+|+.+..
T Consensus 9 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 73 (291)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC--CeeEEEEeecCCcc
Confidence 55677666 4566666666655 89999999 99887766655554 333 47889999987643
No 463
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=75.90 E-value=6.6 Score=35.58 Aligned_cols=87 Identities=18% Similarity=0.177 Sum_probs=54.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCH----HHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CCCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSP----VQAQRANALAAARGLADKVSFQVGDALQQP-----FPDGQ 226 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~ 226 (380)
..+||=.| |+|.++..+++.+ +.+|++++.++ ......+.. .. .++.++.+|+.+.. +....
T Consensus 10 ~~~IlVtG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l-~~----~~v~~~~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 10 KGRVLIAG-ATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL-ED----KGAIIVYGLINEQEAMEKILKEHE 83 (346)
T ss_dssp -CCEEEEC-TTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHH-HH----TTCEEEECCTTCHHHHHHHHHHTT
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHH-Hh----CCcEEEEeecCCHHHHHHHHhhCC
Confidence 35688777 5677777776655 78899998765 333322221 11 46899999997632 21227
Q ss_pred ccEEEeccccCCCCCHHHHHHHHHH
Q 016921 227 FDLVWSMESGEHMPDKSKFVSELAR 251 (380)
Q Consensus 227 fD~V~~~~~l~~~~~~~~~l~~~~r 251 (380)
+|+|+......++.....+++.+.+
T Consensus 84 ~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 84 IDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred CCEEEECCchhhHHHHHHHHHHHHH
Confidence 8999987766555555555555544
No 464
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=75.89 E-value=14 Score=31.77 Aligned_cols=78 Identities=12% Similarity=0.037 Sum_probs=53.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLA-DKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.++|=.|++ |.++..+++.+ |++|+.++.++..++...+.+...... .++.++.+|+.+.. + .-
T Consensus 7 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 6678877765 44555555444 899999999998887777666554222 46889999988742 0 01
Q ss_pred CCccEEEeccccC
Q 016921 225 GQFDLVWSMESGE 237 (380)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (380)
+..|+++.+..+.
T Consensus 86 g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 86 GAVDILVNAAAMF 98 (250)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4789998776553
No 465
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=75.73 E-value=15 Score=31.74 Aligned_cols=78 Identities=21% Similarity=0.170 Sum_probs=52.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.+||=.|+ +|.++..+++.+ |++|++++.++..++...+.+.......++.++.+|+.+.. + .-+
T Consensus 13 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 13 DRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 667887775 455666665554 89999999998877666555544311246888999987742 0 013
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+++.+..+.
T Consensus 92 ~id~lv~nAg~~ 103 (267)
T 1iy8_A 92 RIDGFFNNAGIE 103 (267)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689998776543
No 466
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=75.50 E-value=6.1 Score=34.58 Aligned_cols=76 Identities=16% Similarity=0.081 Sum_probs=47.8
Q ss_pred CCEEEEECCC-cChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCG-IGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcG-tG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.+||=.|++ +|.++..+++.+ |++|+.++.++...+..++.....+ ++.++.+|+.+.. + .-
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 6788888875 366666666655 8899999988752122222222222 3778889987631 0 12
Q ss_pred CCccEEEeccccC
Q 016921 225 GQFDLVWSMESGE 237 (380)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (380)
+.+|+++.+..+.
T Consensus 83 g~id~lv~nAg~~ 95 (275)
T 2pd4_A 83 GSLDFIVHSVAFA 95 (275)
T ss_dssp SCEEEEEECCCCC
T ss_pred CCCCEEEECCccC
Confidence 4789998776543
No 467
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=75.22 E-value=15 Score=27.98 Aligned_cols=91 Identities=12% Similarity=0.151 Sum_probs=51.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~ 231 (380)
..+|+=+|+ |..+..+++.+ +.+|+++|.++...+.+++ ....++.+|..+.. ..-+.+|+|+
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~--------~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS--------YATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT--------TCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 457999997 55555555443 7889999999865543221 12456677765421 1124689888
Q ss_pred eccccCCCCCHHHHHHHHHHhcCCCcEEEEE
Q 016921 232 SMESGEHMPDKSKFVSELARVTAPAGTIIIV 262 (380)
Q Consensus 232 ~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~~ 262 (380)
....-. .+....+....+.+.+. .+++.
T Consensus 76 ~~~~~~--~~~~~~~~~~~~~~~~~-~ii~~ 103 (144)
T 2hmt_A 76 VAIGAN--IQASTLTTLLLKELDIP-NIWVK 103 (144)
T ss_dssp ECCCSC--HHHHHHHHHHHHHTTCS-EEEEE
T ss_pred ECCCCc--hHHHHHHHHHHHHcCCC-eEEEE
Confidence 653221 01223444555556665 55543
No 468
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=75.01 E-value=8.3 Score=33.28 Aligned_cols=77 Identities=17% Similarity=0.108 Sum_probs=54.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C----CCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F----PDGQ 226 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~----~~~~ 226 (380)
+.+||=.|++. .++..+++.+ |++|+++|.++..++...+.+...+ .++.++.+|+.+.. + ..+.
T Consensus 7 ~k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 7 NATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp SCEEEEECCSS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 66788777654 4555555554 8999999999888777777666554 47899999988742 0 0157
Q ss_pred ccEEEeccccCC
Q 016921 227 FDLVWSMESGEH 238 (380)
Q Consensus 227 fD~V~~~~~l~~ 238 (380)
+|+++.+..+..
T Consensus 84 id~lv~nAg~~~ 95 (252)
T 3h7a_A 84 LEVTIFNVGANV 95 (252)
T ss_dssp EEEEEECCCCCC
T ss_pred ceEEEECCCcCC
Confidence 899987766543
No 469
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=74.95 E-value=13 Score=32.15 Aligned_cols=78 Identities=18% Similarity=0.132 Sum_probs=53.1
Q ss_pred CCEEEEECC-CcCh---HHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGC-GIGG---SSRYLAKKFGAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGc-GtG~---~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.+||=.|+ |.|. ++..++++ |++|+.+|.+...++...+.+...+ ..++.++.+|+.+.. + .-
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 678888886 4443 33334443 8999999999988877777665443 257999999998742 0 01
Q ss_pred CCccEEEeccccCC
Q 016921 225 GQFDLVWSMESGEH 238 (380)
Q Consensus 225 ~~fD~V~~~~~l~~ 238 (380)
+.+|+++.+..+..
T Consensus 100 g~id~li~~Ag~~~ 113 (266)
T 3o38_A 100 GRLDVLVNNAGLGG 113 (266)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCcEEEECCCcCC
Confidence 46899988766543
No 470
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=74.73 E-value=4.7 Score=38.83 Aligned_cols=58 Identities=16% Similarity=0.055 Sum_probs=42.7
Q ss_pred CCEEEEECCCcChHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKFGA-KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQ 220 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~~~-~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 220 (380)
..+++|+=||.|.+..-+.+. |. .|.++|+++...+.-+.+.. ..+...++.+|+.++
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~---~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHY---CDPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSC---CCTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhcc---cCCCcceeccchhhh
Confidence 578999999999999988775 54 47899999988776665441 112345677887664
No 471
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=74.72 E-value=26 Score=30.59 Aligned_cols=75 Identities=16% Similarity=0.093 Sum_probs=49.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCH-HHHHHHHHHHH-HcCCCCCeEEEEcCCCC----CC-----C--
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSP-VQAQRANALAA-ARGLADKVSFQVGDALQ----QP-----F-- 222 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~-~~~~~a~~~~~-~~~~~~~v~~~~~d~~~----~~-----~-- 222 (380)
+.++|=.|+ +|.++..+++.+ |++|++++.++ ..++...+.+. ..+ .++.++.+|+.+ .. +
T Consensus 23 ~k~~lVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 23 APAAVVTGA-AKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS--NTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp CCEEEETTC-SSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC--CceEEEEeecCCccCCHHHHHHHHHH
Confidence 566776665 456666665554 89999999987 65555544443 333 468899999887 21 0
Q ss_pred ---CCCCccEEEecccc
Q 016921 223 ---PDGQFDLVWSMESG 236 (380)
Q Consensus 223 ---~~~~fD~V~~~~~l 236 (380)
.-+.+|+++.+..+
T Consensus 100 ~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 01468999877654
No 472
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=74.60 E-value=14 Score=32.65 Aligned_cols=78 Identities=14% Similarity=0.049 Sum_probs=53.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CC---EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC--------C--
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GA---KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP--------F-- 222 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~---~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~-- 222 (380)
+.+||=.|++ |.++..+++.+ |+ .|+.++.+.+.++...+.+.......++.++.+|+.+.. .
T Consensus 33 ~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 6788888865 44555555544 55 999999999888877776655432357889999987742 1
Q ss_pred CCCCccEEEeccccC
Q 016921 223 PDGQFDLVWSMESGE 237 (380)
Q Consensus 223 ~~~~fD~V~~~~~l~ 237 (380)
.-+..|+++.+..+.
T Consensus 112 ~~g~iD~lVnnAG~~ 126 (287)
T 3rku_A 112 EFKDIDILVNNAGKA 126 (287)
T ss_dssp GGCSCCEEEECCCCC
T ss_pred hcCCCCEEEECCCcC
Confidence 114789999876543
No 473
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=74.51 E-value=17 Score=31.79 Aligned_cols=76 Identities=12% Similarity=0.097 Sum_probs=52.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.+||=.|+ +|.++..+++.+ |++|++++.++..++...+.+...+ .++.++.+|+.+.. + .-+
T Consensus 22 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 22 SEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp SCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 567887775 455666665554 8899999999887766655554444 46888999987632 0 014
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+++.+..+.
T Consensus 99 ~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 99 PVDVLVNNAGRP 110 (277)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998776543
No 474
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=74.51 E-value=7.4 Score=35.66 Aligned_cols=93 Identities=15% Similarity=0.115 Sum_probs=59.6
Q ss_pred CCCEEEEECCC-cChHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCC--C-C-CC-CCCCccEE
Q 016921 158 RPKNVVDVGCG-IGGSSRYLAKKF-GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDAL--Q-Q-PF-PDGQFDLV 230 (380)
Q Consensus 158 ~~~~vLDiGcG-tG~~~~~l~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~-~-~~-~~~~fD~V 230 (380)
++.+||=+|+| .|..+..+++.. |++|+++|.+++.++.+++ .|. -.++..+-. + + .. ....+|+|
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~----lGa---~~vi~~~~~~~~~v~~~~~g~g~Dvv 258 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGA---DHVVDARRDPVKQVMELTRGRGVNVA 258 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTC---SEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----hCC---CEEEeccchHHHHHHHHhCCCCCcEE
Confidence 48999999987 477788888888 9999999999988887764 332 122221111 0 0 01 12369998
Q ss_pred EeccccCCCCCHH-HHHHHHHHhcCCCcEEEEEec
Q 016921 231 WSMESGEHMPDKS-KFVSELARVTAPAGTIIIVTW 264 (380)
Q Consensus 231 ~~~~~l~~~~~~~-~~l~~~~r~LkpgG~l~~~~~ 264 (380)
+-.-. ... ..++.+.+. +||++++...
T Consensus 259 id~~G-----~~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 259 MDFVG-----SQATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp EESSC-----CHHHHHHGGGGEE--EEEEEEECCC
T ss_pred EECCC-----CchHHHHHHHhhc--CCCEEEEEeC
Confidence 75432 211 156666666 9999887653
No 475
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=74.48 E-value=17 Score=31.60 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=52.8
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC------C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP------D 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~------~ 224 (380)
+.+||=.|+ +|.++..+++.+ |++|++++.++..++...+.+...+ .++.++.+|+.+.. +. +
T Consensus 21 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 21 GTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 667887775 555666666554 8999999999887766655554443 46889999987642 10 1
Q ss_pred CCccEEEeccccC
Q 016921 225 GQFDLVWSMESGE 237 (380)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (380)
+.+|+++.+..+.
T Consensus 98 g~id~lv~nAg~~ 110 (273)
T 1ae1_A 98 GKLNILVNNAGVV 110 (273)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 6789998776553
No 476
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=74.42 E-value=21 Score=33.99 Aligned_cols=96 Identities=24% Similarity=0.279 Sum_probs=57.6
Q ss_pred CCEEEEECCCc-C-hHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-------cC------C-CCCeEEEEcCCCCCCC
Q 016921 159 PKNVVDVGCGI-G-GSSRYLAKKFGAKCQGITLSPVQAQRANALAAA-------RG------L-ADKVSFQVGDALQQPF 222 (380)
Q Consensus 159 ~~~vLDiGcGt-G-~~~~~l~~~~~~~v~giD~s~~~~~~a~~~~~~-------~~------~-~~~v~~~~~d~~~~~~ 222 (380)
-.+|.=||+|. | .++..++.. |..|+++|.+++.++.+++.... .+ . .....+ ..|...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~--- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE--- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG---
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH---
Confidence 45799999985 3 344445543 78999999999988877653321 11 0 011222 334322
Q ss_pred CCCCccEEEeccccCCCCCHHHHHHHHHHhcCCCcEEEE
Q 016921 223 PDGQFDLVWSMESGEHMPDKSKFVSELARVTAPAGTIII 261 (380)
Q Consensus 223 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~r~LkpgG~l~~ 261 (380)
-...|+|+..- .....-...+++++...++|+..++.
T Consensus 112 -~~~aDlVIeaV-pe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 -LSTVDLVVEAV-FEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -GTTCSEEEECC-CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -HCCCCEEEEcC-CCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 13578887643 22111136788889999988876654
No 477
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=74.02 E-value=19 Score=31.50 Aligned_cols=76 Identities=18% Similarity=0.114 Sum_probs=47.4
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.+||=.|++. |.++..+++.+ |++|++++.++...+..++.....+ ++.++.+|+.+.. + .-
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG---SDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67888888752 66666666655 8999999988752222222222222 3678889987642 0 01
Q ss_pred CCccEEEeccccC
Q 016921 225 GQFDLVWSMESGE 237 (380)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (380)
+.+|+++.+..+.
T Consensus 98 g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 98 GSLDIIVHSIAYA 110 (285)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4789998876543
No 478
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=73.61 E-value=11 Score=27.46 Aligned_cols=66 Identities=21% Similarity=0.151 Sum_probs=43.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---C-CEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-C--CCCCccEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---G-AKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-F--PDGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~-~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~--~~~~fD~V~ 231 (380)
..+|+=+|+ |..+..+++.+ + .+|+++|.++..++... . .++.+...|..+.. + .-..+|+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 568999998 55555555443 6 78999999987766543 1 35677888876521 0 013578887
Q ss_pred ecc
Q 016921 232 SME 234 (380)
Q Consensus 232 ~~~ 234 (380)
..-
T Consensus 75 ~~~ 77 (118)
T 3ic5_A 75 SAA 77 (118)
T ss_dssp ECS
T ss_pred ECC
Confidence 654
No 479
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=73.29 E-value=14 Score=31.81 Aligned_cols=76 Identities=13% Similarity=0.107 Sum_probs=52.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC------C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP------D 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~------~ 224 (380)
+.+||=.|+ +|.++..+++.+ |++|++++.++..++...+.+...+ .++.++.+|+.+.. +. .
T Consensus 9 ~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 9 GCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 667887775 556666666554 8999999999887766555554443 46888999987741 10 1
Q ss_pred CCccEEEeccccC
Q 016921 225 GQFDLVWSMESGE 237 (380)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (380)
+.+|+++.+..+.
T Consensus 86 g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 86 GKLNILVNNAGIV 98 (260)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5789998776543
No 480
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=73.21 E-value=16 Score=31.93 Aligned_cols=77 Identities=18% Similarity=0.217 Sum_probs=53.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCC-CCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGL-ADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.+||=.|++ |.++..+++.+ |++|+.+|.++..++...+.+...+. ..++.++.+|+.+.. + ..
T Consensus 11 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 11 DRTYLVTGGG-SGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 6778877754 55555555554 89999999999888777766655432 126889999988742 0 01
Q ss_pred CCccEEEecccc
Q 016921 225 GQFDLVWSMESG 236 (380)
Q Consensus 225 ~~fD~V~~~~~l 236 (380)
+.+|+++.+...
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468998876654
No 481
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=72.95 E-value=24 Score=29.59 Aligned_cols=71 Identities=17% Similarity=0.113 Sum_probs=46.7
Q ss_pred EEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-------CCCCCccEE
Q 016921 161 NVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-------FPDGQFDLV 230 (380)
Q Consensus 161 ~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~fD~V 230 (380)
+||=.|+ +|.++..+++.+ |++|+.++.++..++...+.+ ..++.++.+|+.+.. --.+.+|++
T Consensus 3 ~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l 76 (230)
T 3guy_A 3 LIVITGA-SSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSIPSTV 76 (230)
T ss_dssp CEEEEST-TSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred EEEEecC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence 3565664 456666666655 889999999988766544322 357888999987741 112446998
Q ss_pred EeccccC
Q 016921 231 WSMESGE 237 (380)
Q Consensus 231 ~~~~~l~ 237 (380)
+.+....
T Consensus 77 v~~Ag~~ 83 (230)
T 3guy_A 77 VHSAGSG 83 (230)
T ss_dssp EECCCCC
T ss_pred EEeCCcC
Confidence 8766544
No 482
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=72.74 E-value=40 Score=29.10 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=48.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CCCCCccEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FPDGQFDLV 230 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~fD~V 230 (380)
++.+|=-|.+. .++..+++.+ |++|+..|.+.. +.+.+.+.+.+ .++.++.+|+.+.. +..+.+|++
T Consensus 9 GKvalVTGas~-GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 9 GRKALVTGANT-GLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCEEEEeCcCC-HHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 66666666554 4555555554 899999998753 23333444444 47889999987642 345789999
Q ss_pred EeccccCC
Q 016921 231 WSMESGEH 238 (380)
Q Consensus 231 ~~~~~l~~ 238 (380)
+.+-.+..
T Consensus 84 VNNAGi~~ 91 (247)
T 4hp8_A 84 VNNAGIIR 91 (247)
T ss_dssp EECCCCCC
T ss_pred EECCCCCC
Confidence 87765544
No 483
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=72.61 E-value=18 Score=31.91 Aligned_cols=76 Identities=18% Similarity=0.073 Sum_probs=52.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.+||=.|+ +|.++..+++.+ |++|+++|.++..++...+.+...+ .++.++.+|+.+.. + .-+
T Consensus 34 ~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 34 GKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 667887775 556666666555 8999999999887766555554444 46888999987742 1 014
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+++.+..+.
T Consensus 111 ~iD~lvnnAg~~ 122 (291)
T 3cxt_A 111 IIDILVNNAGII 122 (291)
T ss_dssp CCCEEEECCCCC
T ss_pred CCcEEEECCCcC
Confidence 689998776543
No 484
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=72.52 E-value=24 Score=32.82 Aligned_cols=79 Identities=11% Similarity=0.035 Sum_probs=47.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHH---HHHHHHHHHHHc-------CCCCCeEEEEcCCCCCC-C-C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPV---QAQRANALAAAR-------GLADKVSFQVGDALQQP-F-P 223 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~---~~~~a~~~~~~~-------~~~~~v~~~~~d~~~~~-~-~ 223 (380)
+.+||=.| |+|.++..+++.+ +.+|++++.++. ..+...+.+... ....++.++.+|+.+.+ + .
T Consensus 69 ~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~ 147 (427)
T 4f6c_A 69 LGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVL 147 (427)
T ss_dssp CEEEEEEC-TTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCCC
T ss_pred CCEEEEec-CCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCCC
Confidence 55777776 6788888887766 678999987765 333222222111 01247999999987732 1 2
Q ss_pred CCCccEEEeccccCC
Q 016921 224 DGQFDLVWSMESGEH 238 (380)
Q Consensus 224 ~~~fD~V~~~~~l~~ 238 (380)
...+|+|+...+..+
T Consensus 148 ~~~~d~Vih~A~~~~ 162 (427)
T 4f6c_A 148 PENMDTIIHAGARTD 162 (427)
T ss_dssp SSCCSEEEECCCCC-
T ss_pred cCCCCEEEECCcccC
Confidence 367899987655443
No 485
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=72.51 E-value=18 Score=31.20 Aligned_cols=76 Identities=16% Similarity=0.173 Sum_probs=51.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (380)
+.+||=.|+ +|.++..+++.+ |++|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -+
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 7 GKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 667887775 455666666554 8999999999887766655554433 46888999987642 00 13
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+++.+..+.
T Consensus 84 ~id~lv~nAg~~ 95 (262)
T 1zem_A 84 KIDFLFNNAGYQ 95 (262)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998776543
No 486
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=72.31 E-value=28 Score=29.25 Aligned_cols=77 Identities=17% Similarity=0.077 Sum_probs=52.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCCC-----CCC-----
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAA-ARGLADKVSFQVGDALQQP-----FPD----- 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~-----~~~----- 224 (380)
+.+||=.|+ +|.++..+++.+ |.+|+.++.++..++...+.+. ..+ .++.++.+|+.+.. +..
T Consensus 2 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 456777775 455666666655 8899999999887776665553 333 47899999998742 111
Q ss_pred CCccEEEeccccCC
Q 016921 225 GQFDLVWSMESGEH 238 (380)
Q Consensus 225 ~~fD~V~~~~~l~~ 238 (380)
+.+|+++.+..+.+
T Consensus 79 g~id~li~~Ag~~~ 92 (235)
T 3l77_A 79 GDVDVVVANAGLGY 92 (235)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCcccc
Confidence 37899998766544
No 487
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=72.07 E-value=24 Score=30.80 Aligned_cols=76 Identities=13% Similarity=0.003 Sum_probs=45.7
Q ss_pred CCEEEEECCCc-ChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGI-GGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGt-G~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.+||=.|++. +.++..+++.+ |++|+.++.+. .....+.+.... .++.++.+|+.+.. + .-
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 67888888431 23444444443 89999999987 212222222222 35889999988742 0 12
Q ss_pred CCccEEEeccccCC
Q 016921 225 GQFDLVWSMESGEH 238 (380)
Q Consensus 225 ~~fD~V~~~~~l~~ 238 (380)
+.+|+++.+..+..
T Consensus 102 g~id~li~nAg~~~ 115 (280)
T 3nrc_A 102 DGLDAIVHSIAFAP 115 (280)
T ss_dssp SSCCEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 47899998766543
No 488
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=72.04 E-value=20 Score=30.82 Aligned_cols=76 Identities=24% Similarity=0.133 Sum_probs=51.4
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeC-CHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----C
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITL-SPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----D 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~-s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~ 224 (380)
+.+||=.| |+|.++..+++.+ |.+|++++. ++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 21 ~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 21 GKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56777665 5677777776665 789999998 7776665555554433 46889999987642 10 1
Q ss_pred CCccEEEeccccC
Q 016921 225 GQFDLVWSMESGE 237 (380)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (380)
+.+|+|+.+....
T Consensus 98 ~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 98 GGLDFVMSNSGME 110 (274)
T ss_dssp SCEEEEECCCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689988765543
No 489
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=71.83 E-value=20 Score=31.48 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=52.6
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcC---CCCCeEEEEcCCCCCC-----CC----
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARG---LADKVSFQVGDALQQP-----FP---- 223 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~-----~~---- 223 (380)
+.+||=.|+ +|.++..+++.+ |.+|++++.++..++...+.+.... ...++.++.+|+.+.. +.
T Consensus 18 ~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 18 GQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 677887774 566777766655 8899999999887766655554410 1247899999987642 11
Q ss_pred -CCCccEEEecccc
Q 016921 224 -DGQFDLVWSMESG 236 (380)
Q Consensus 224 -~~~fD~V~~~~~l 236 (380)
-+.+|+|+.+...
T Consensus 97 ~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 97 TFGKINFLVNNGGG 110 (303)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 1368999876654
No 490
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=71.62 E-value=7.2 Score=41.12 Aligned_cols=71 Identities=18% Similarity=0.158 Sum_probs=49.8
Q ss_pred CCCCEEEEECCCcChHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCC------------C--
Q 016921 157 KRPKNVVDVGCGIGGSSRYLAKKFGA--KCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQ------------Q-- 220 (380)
Q Consensus 157 ~~~~~vLDiGcGtG~~~~~l~~~~~~--~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------------~-- 220 (380)
....+++|+=||.|.++.-+.+. |. .+.++|+++...+.-+.+. +...++..|+.+ .
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~------p~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNN------PGSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHC------TTSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCCCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC------CCCccccccHHHHhhhccchhhhhhhh
Confidence 34679999999999999998876 65 5779999999887766543 245556555321 1
Q ss_pred -CCC-CCCccEEEecc
Q 016921 221 -PFP-DGQFDLVWSME 234 (380)
Q Consensus 221 -~~~-~~~fD~V~~~~ 234 (380)
.++ .+.+|+|+...
T Consensus 611 ~~lp~~~~vDll~GGp 626 (1002)
T 3swr_A 611 QRLPQKGDVEMLCGGP 626 (1002)
T ss_dssp CBCCCTTTCSEEEECC
T ss_pred hhcccCCCeeEEEEcC
Confidence 122 35789998643
No 491
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=71.41 E-value=17 Score=31.39 Aligned_cols=75 Identities=16% Similarity=0.146 Sum_probs=54.2
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.+||=.|+ +|.++..+++.+ |++|+.++.++..++...+.+...+ .++.++.+|+.+.. + ..+
T Consensus 29 ~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 29 GQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 667777775 566666666655 8999999999988887777766554 47899999987742 0 014
Q ss_pred CccEEEecccc
Q 016921 226 QFDLVWSMESG 236 (380)
Q Consensus 226 ~fD~V~~~~~l 236 (380)
..|+++.+..+
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999877665
No 492
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=70.89 E-value=29 Score=30.23 Aligned_cols=76 Identities=16% Similarity=0.091 Sum_probs=52.0
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-----CCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-----PDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-----~~~ 225 (380)
+.+||=.| |+|.++..+++.+ |.+|++++.++..++...+.+...+ .++.++.+|+.+.. + .-+
T Consensus 44 ~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 44 NKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG--YESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC--CceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 56777776 4577777777766 7899999988877666555554333 46889999987642 0 014
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+|+.+..+.
T Consensus 121 ~id~li~~Ag~~ 132 (285)
T 2c07_A 121 NVDILVNNAGIT 132 (285)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998776543
No 493
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=70.78 E-value=20 Score=30.30 Aligned_cols=88 Identities=14% Similarity=-0.008 Sum_probs=58.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----CCCCCccEEE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----FPDGQFDLVW 231 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~fD~V~ 231 (380)
..+|+=+|+ |..+..+++.+ +. |+++|.+++.++.++ .++.++.+|+.+.. ..-...|.|+
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKANVRGARAVI 76 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence 568988887 57777777766 46 999999987765443 14788999987631 1235688888
Q ss_pred eccccCCCCCH--HHHHHHHHHhcCCCcEEEEEe
Q 016921 232 SMESGEHMPDK--SKFVSELARVTAPAGTIIIVT 263 (380)
Q Consensus 232 ~~~~l~~~~~~--~~~l~~~~r~LkpgG~l~~~~ 263 (380)
+.. ++. ...+....+.+.|+..++...
T Consensus 77 ~~~-----~~d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 77 VDL-----ESDSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp ECC-----SCHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred EcC-----CCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 743 232 334456677788877776643
No 494
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=70.68 E-value=20 Score=31.53 Aligned_cols=76 Identities=17% Similarity=0.164 Sum_probs=51.7
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCCC-----C-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAAR-GLADKVSFQVGDALQQP-----F-----PD 224 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~-----~-----~~ 224 (380)
+.+||=.|+ +|.++..+++.+ |.+|++++.++..++...+.+... + .++.++.+|+.+.. + ..
T Consensus 26 ~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 26 GKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 567887774 566666666655 889999999987776555544332 3 46899999987631 0 12
Q ss_pred CCccEEEeccccC
Q 016921 225 GQFDLVWSMESGE 237 (380)
Q Consensus 225 ~~fD~V~~~~~l~ 237 (380)
+.+|+|+.+..+.
T Consensus 103 g~id~li~~Ag~~ 115 (302)
T 1w6u_A 103 GHPNIVINNAAGN 115 (302)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689998776543
No 495
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=70.63 E-value=18 Score=31.59 Aligned_cols=73 Identities=19% Similarity=0.201 Sum_probs=50.1
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (380)
+.+||=.| |+|.++..+++.+ |.+|++++.++..++...+.+...+. .++.++.+|+.+.. +. -+
T Consensus 28 ~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 28 GKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 66788666 4566666666655 88999999999877766555544332 36888999987631 00 14
Q ss_pred CccEEEec
Q 016921 226 QFDLVWSM 233 (380)
Q Consensus 226 ~fD~V~~~ 233 (380)
.+|+++.+
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 78998866
No 496
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=70.55 E-value=20 Score=30.78 Aligned_cols=76 Identities=18% Similarity=0.192 Sum_probs=53.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----FP-----DG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~-----~~ 225 (380)
+.++|=.|++ |.++..+++.+ |++|+.+|.++..++...+.+...+ .++.++.+|+.+.. +. -+
T Consensus 12 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 12 DAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6677777755 45555555544 8999999999988877777666554 57899999988742 00 14
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
..|+++.+..+.
T Consensus 89 ~id~lv~nAg~~ 100 (256)
T 3gaf_A 89 KITVLVNNAGGG 100 (256)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789998776554
No 497
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=70.31 E-value=21 Score=30.04 Aligned_cols=72 Identities=17% Similarity=0.035 Sum_probs=47.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC-----C-CCCCccE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP-----F-PDGQFDL 229 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-~~~~fD~ 229 (380)
+.+||=.|+ +|.++..+++.+ |.+|+++|.++..++...+. . .+++++.+|+.+.. + .-+.+|+
T Consensus 7 ~~~vlVTGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~---~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 7 GLRALVTGA-GKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---C---PGIEPVCVDLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S---TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---c---cCCCcEEecCCCHHHHHHHHHHcCCCCE
Confidence 667887764 566666666655 88999999998765443321 1 24677888987631 1 1246899
Q ss_pred EEeccccC
Q 016921 230 VWSMESGE 237 (380)
Q Consensus 230 V~~~~~l~ 237 (380)
|+....+.
T Consensus 80 vi~~Ag~~ 87 (244)
T 1cyd_A 80 LVNNAALV 87 (244)
T ss_dssp EEECCCCC
T ss_pred EEECCccc
Confidence 98776543
No 498
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=70.21 E-value=21 Score=30.24 Aligned_cols=76 Identities=17% Similarity=0.097 Sum_probs=54.3
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCeEEEEcCCCCCC----------CCCC
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGLADKVSFQVGDALQQP----------FPDG 225 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------~~~~ 225 (380)
+.+||=.|+ +|.++..+++.+ |++|++++.++..++...+.+...+ .++.++.+|+.+.. -..+
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567777774 555666665554 8999999999988887777766654 47899999987742 0124
Q ss_pred CccEEEeccccC
Q 016921 226 QFDLVWSMESGE 237 (380)
Q Consensus 226 ~fD~V~~~~~l~ 237 (380)
.+|+++.+..+.
T Consensus 82 ~id~li~~Ag~~ 93 (247)
T 3lyl_A 82 AIDILVNNAGIT 93 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998776554
No 499
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=69.92 E-value=21 Score=30.92 Aligned_cols=76 Identities=21% Similarity=0.104 Sum_probs=51.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeC-CHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCC----C-----CC-
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITL-SPVQAQRANALAAAR-GLADKVSFQVGDALQQ----P-----FP- 223 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~-s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~----~-----~~- 223 (380)
+.+||=.| |+|.++..+++.+ |++|+++|. ++..++...+.+... + .++.++.+|+.+. . +.
T Consensus 11 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 11 CPAAVITG-GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA--GSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC--CceEEEeccCCCccccHHHHHHHHHH
Confidence 56677555 5566777776665 899999999 887776655555433 3 4688999998775 2 00
Q ss_pred ----CCCccEEEeccccC
Q 016921 224 ----DGQFDLVWSMESGE 237 (380)
Q Consensus 224 ----~~~fD~V~~~~~l~ 237 (380)
-+.+|+++.+..+.
T Consensus 88 ~~~~~g~id~lv~nAg~~ 105 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASAY 105 (276)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 13689998776543
No 500
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=69.85 E-value=8.7 Score=34.67 Aligned_cols=78 Identities=17% Similarity=0.029 Sum_probs=47.5
Q ss_pred CCEEEEECCCcChHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCC---CCCeEEEEcCCCCCC-C--CCCCccE
Q 016921 159 PKNVVDVGCGIGGSSRYLAKKF---GAKCQGITLSPVQAQRANALAAARGL---ADKVSFQVGDALQQP-F--PDGQFDL 229 (380)
Q Consensus 159 ~~~vLDiGcGtG~~~~~l~~~~---~~~v~giD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~-~--~~~~fD~ 229 (380)
+.+||=.| |+|.++..+++.+ |.+|++++.++.........+..... ..++.++.+|+.+.. + .-..+|+
T Consensus 25 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 25 PKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 67898777 6777777777665 78999999854321111111111100 036999999987642 0 0136899
Q ss_pred EEeccccC
Q 016921 230 VWSMESGE 237 (380)
Q Consensus 230 V~~~~~l~ 237 (380)
|+......
T Consensus 104 Vih~A~~~ 111 (351)
T 3ruf_A 104 VLHQAALG 111 (351)
T ss_dssp EEECCCCC
T ss_pred EEECCccC
Confidence 98766543
Done!