Query 016923
Match_columns 380
No_of_seqs 169 out of 1329
Neff 7.4
Searched_HMMs 13730
Date Mon Mar 25 06:02:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016923.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016923hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rmka_ g.3.6.1 (A:) Conotoxin 12.1 4.3 0.00032 22.4 -3.0 17 149-165 13-29 (31)
2 d2e74f1 f.23.25.1 (F:1-32) Pet 8.1 1.8E+02 0.013 15.7 3.5 15 5-19 10-24 (32)
3 d1k8kg_ a.118.13.1 (G:) Arp2/3 3.5 2.2E+02 0.016 21.4 1.8 29 270-298 80-108 (143)
4 d1jjcb1 a.6.1.1 (B:1-38,B:152- 3.0 1.6E+02 0.011 19.6 0.4 12 285-296 5-16 (77)
5 d2hjja1 d.50.3.3 (A:10-75) Hyp 2.7 1.1E+02 0.0082 19.9 -0.6 18 274-291 38-57 (66)
6 d2j6ba1 d.321.1.1 (A:1-109) Af 2.7 2.5E+02 0.018 20.1 1.2 17 247-263 48-64 (109)
7 d1x6va2 c.26.1.5 (A:390-624) A 2.6 2.4E+02 0.018 22.8 1.2 28 253-281 206-233 (235)
8 d1qrjb1 a.28.3.1 (B:131-214) H 2.5 3.6E+02 0.026 18.1 1.9 20 156-175 3-22 (84)
9 d2jn6a1 a.4.1.19 (A:1-89) Unch 2.5 2.1E+02 0.015 19.1 0.6 20 272-291 25-47 (89)
10 d1hx1b_ a.7.7.1 (B:) BAG-famil 2.3 2.1E+02 0.015 20.6 0.4 15 252-266 70-84 (112)
No 1
>d1rmka_ g.3.6.1 (A:) Conotoxin {Marble cone (Conus marmoreus), mrVIb [TaxId: 42752]}
Probab=12.12 E-value=4.3 Score=22.36 Aligned_cols=17 Identities=29% Similarity=0.641 Sum_probs=13.7
Q ss_pred HHHHHHhhhhhhccccc
Q 016923 149 YLCYLVYAPLYISGPII 165 (380)
Q Consensus 149 ~l~Y~~ffP~l~aGPi~ 165 (380)
.++|+...|.+++||.+
T Consensus 13 i~gfiyccpglicgpfv 29 (31)
T d1rmka_ 13 ILGFVYCCPGLICGPFV 29 (31)
T ss_dssp TTCCCEESTTCCBCSSS
T ss_pred eeeeeeeCCCcccccee
Confidence 35677788999999975
No 2
>d2e74f1 f.23.25.1 (F:1-32) PetM subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=8.12 E-value=1.8e+02 Score=15.72 Aligned_cols=15 Identities=20% Similarity=0.315 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHhhhH
Q 016923 5 WLFISFIYLFYLHGA 19 (380)
Q Consensus 5 ~l~~sl~f~~~~~g~ 19 (380)
.+-++++|..|..|.
T Consensus 10 ~lsfglifvgwglga 24 (32)
T d2e74f1 10 LLSFGLIFVGWGLGV 24 (32)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHhHHHH
Confidence 344788888885554
No 3
>d1k8kg_ a.118.13.1 (G:) Arp2/3 complex 16 kDa subunit ARPC5 {Cow (Bos taurus) [TaxId: 9913]}
Probab=3.45 E-value=2.2e+02 Score=21.40 Aligned_cols=29 Identities=14% Similarity=0.287 Sum_probs=22.8
Q ss_pred ccchHHHHhhhhhhHHHHhhceeeeeccC
Q 016923 270 CHNLETFWKNWHASFNKWLVRYMYIPLGG 298 (380)
Q Consensus 270 a~s~~~fWr~w~~~l~~Wlr~YvY~pl~g 298 (380)
+..+..+.+.-+..-...|-+|||.=+..
T Consensus 80 ~~dI~~~v~~L~~~~~D~LMKYiYkG~~~ 108 (143)
T d1k8kg_ 80 ANDIEKAVQSLDKNGVDLLMKYIYKGFES 108 (143)
T ss_dssp GGGHHHHHHTSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhcChHhHHHHHHHHHHhccC
Confidence 34566777777888889999999998753
No 4
>d1jjcb1 a.6.1.1 (B:1-38,B:152-190) Domains B1 and B5 of PheRS-beta, PheT {Thermus thermophilus [TaxId: 274]}
Probab=2.96 E-value=1.6e+02 Score=19.60 Aligned_cols=12 Identities=25% Similarity=0.318 Sum_probs=8.3
Q ss_pred HHHhhceeeeec
Q 016923 285 NKWLVRYMYIPL 296 (380)
Q Consensus 285 ~~Wlr~YvY~pl 296 (380)
.+||++||=.++
T Consensus 5 ~~WLke~v~~~~ 16 (77)
T d1jjcb1 5 FSWLKAYVPELE 16 (77)
T ss_dssp HHHHTTTSTTCC
T ss_pred HHHHHHHcCCCC
Confidence 479999984443
No 5
>d2hjja1 d.50.3.3 (A:10-75) Hypothetical protein YkfF {Escherichia coli [TaxId: 562]}
Probab=2.73 E-value=1.1e+02 Score=19.90 Aligned_cols=18 Identities=28% Similarity=0.735 Sum_probs=8.9
Q ss_pred HHHHhhhhh--hHHHHhhce
Q 016923 274 ETFWKNWHA--SFNKWLVRY 291 (380)
Q Consensus 274 ~~fWr~w~~--~l~~Wlr~Y 291 (380)
+-.||.||- .-..||-+|
T Consensus 38 ~mvWR~wNfEp~Ag~~lNry 57 (66)
T d2hjja1 38 RMVWRAWNFEPDAGEGLNRY 57 (66)
T ss_dssp CEEEEEESSSTTHHHHHHHH
T ss_pred cEEEEEeccCCCHHHHHHHH
Confidence 445777763 233444443
No 6
>d2j6ba1 d.321.1.1 (A:1-109) Afv3-109 {Acidianus filamentous virus 1 [TaxId: 235266]}
Probab=2.68 E-value=2.5e+02 Score=20.13 Aligned_cols=17 Identities=35% Similarity=0.403 Sum_probs=12.4
Q ss_pred HHHHhHhhcCccCCCCC
Q 016923 247 YFRLWSLICGIEAPENM 263 (380)
Q Consensus 247 ~a~g~a~l~Gi~~p~Nf 263 (380)
-|...+.++|+++|.|-
T Consensus 48 TAqlls~Llgv~i~~NR 64 (109)
T d2j6ba1 48 TAELLSSILGVNVPMNR 64 (109)
T ss_dssp HHHHHHHHHTSCCCBCC
T ss_pred HHHHHHHHhCcccccce
Confidence 34555788899999773
No 7
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.55 E-value=2.4e+02 Score=22.77 Aligned_cols=28 Identities=18% Similarity=0.246 Sum_probs=22.2
Q ss_pred hhcCccCCCCCccccccccchHHHHhhhh
Q 016923 253 LICGIEAPENMPRCVNNCHNLETFWKNWH 281 (380)
Q Consensus 253 ~l~Gi~~p~Nf~~~~~~a~s~~~fWr~w~ 281 (380)
+-.|.++|+.|-+| |.+.-+++.++.-+
T Consensus 206 L~~G~~iP~~f~rP-EV~~iL~k~~k~l~ 233 (235)
T d1x6va2 206 AREGQKPPEGFMAP-KAWTVLTEYYKSLE 233 (235)
T ss_dssp HHTTCCCCTTSSCH-HHHHHHHHHHHHHH
T ss_pred HHCcCCCCccCCcH-HHHHHHHHHHHhhh
Confidence 34789999999998 88888888876544
No 8
>d1qrjb1 a.28.3.1 (B:131-214) HTLV-I capsid protein {Human T-cell leukemia virus type 1 [TaxId: 11908]}
Probab=2.52 E-value=3.6e+02 Score=18.09 Aligned_cols=20 Identities=20% Similarity=0.311 Sum_probs=15.8
Q ss_pred hhhhhccccccHHHHHHHhc
Q 016923 156 APLYISGPIISFNAFASQLE 175 (380)
Q Consensus 156 fP~l~aGPi~~y~~f~~q~~ 175 (380)
|-.+-.||=..|.||++.+.
T Consensus 3 ~~~IkQGpkEpf~dfVdRl~ 22 (84)
T d1qrjb1 3 WASILQGLEEPYHAFVERLN 22 (84)
T ss_dssp GGGCCBCTTSCHHHHHHHHH
T ss_pred cccCccCCCCcHHHHHHHHH
Confidence 34567899999999998654
No 9
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=2.51 E-value=2.1e+02 Score=19.05 Aligned_cols=20 Identities=15% Similarity=0.664 Sum_probs=12.0
Q ss_pred chHHHHhhhhh---hHHHHhhce
Q 016923 272 NLETFWKNWHA---SFNKWLVRY 291 (380)
Q Consensus 272 s~~~fWr~w~~---~l~~Wlr~Y 291 (380)
|.++.=+..++ ++++|.++|
T Consensus 25 s~~~vA~~lGIs~~tl~~W~k~~ 47 (89)
T d2jn6a1 25 SLQQIANDLGINRVTLKNWIIKY 47 (89)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHHH
T ss_pred cHHHHHHHHCCCHHHHHHHHHHH
Confidence 44444444443 577899987
No 10
>d1hx1b_ a.7.7.1 (B:) BAG-family molecular chaperon regulator-1, BAG1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.35 E-value=2.1e+02 Score=20.61 Aligned_cols=15 Identities=27% Similarity=0.264 Sum_probs=12.1
Q ss_pred HhhcCccCCCCCccc
Q 016923 252 SLICGIEAPENMPRC 266 (380)
Q Consensus 252 a~l~Gi~~p~Nf~~~ 266 (380)
=.+|++.+|+||.++
T Consensus 70 E~LDsl~lp~~~~~~ 84 (112)
T d1hx1b_ 70 EEIDTLILPENFKDS 84 (112)
T ss_dssp HHHTTCCCCTTCHHH
T ss_pred HHhhhccCcHHHHHH
Confidence 467999999998543
Done!