BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016924
(380 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/379 (53%), Positives = 258/379 (68%), Gaps = 1/379 (0%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
EKI D SNGDVA + Y YKED+ L+K +G D+ RFSISW+RILP+G++ GGVN++G+ +
Sbjct: 72 EKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKY 131
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YNNLINEL+S G+ PF+TLFHWD+PQALED+Y GFLSP I+ DF DYA++CFKEFGDRVK
Sbjct: 132 YNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVK 191
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNY-IGNCPAGNSATEPYVAAHHLILSHATAVKL 181
+WIT NEP T GYA G APGRCS + GNC G+S EPY A HH +L+HA V+L
Sbjct: 192 NWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRL 251
Query: 182 YRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQ 241
Y+ YQA Q G IGIT+ S W VP + ++ AA RAIDF FGW +P+ G YP SM+
Sbjct: 252 YKAKYQALQKGKIGITLVSHWFVPFSRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMR 311
Query: 242 HLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEK 301
LVGNRLP+FTK Q+++VKG+ DF+GLNYYTA+YA+ + R N T +
Sbjct: 312 GLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVR 371
Query: 302 NGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALND 361
NG P+G S WL +YP+G R+ TENGV + N+ + P+ AL D
Sbjct: 372 NGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKD 431
Query: 362 TVRVNYYNDHLSYILEAIK 380
R+ YY+ HL +L AI+
Sbjct: 432 DARIEYYHKHLLSLLSAIR 450
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/378 (52%), Positives = 251/378 (66%), Gaps = 1/378 (0%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
EKI D +NGDVA + Y RYKEDI ++K + D+ RFSISW R+LP G +SGGVN++G+++
Sbjct: 57 EKIKDRTNGDVAIDEYHRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINY 116
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YNNLINE+++NG+ P+VTLFHWD PQALEDEY GFL IV DF DYA+LCFKEFGDRVK
Sbjct: 117 YNNLINEVLANGMQPYVTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVK 176
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIG-NCPAGNSATEPYVAAHHLILSHATAVKL 181
HWITLNEP V YA GT APGRCS+++ NC G+S EPY+AAH+ +L+HA A +L
Sbjct: 177 HWITLNEPWGVSMNAYAYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARL 236
Query: 182 YRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQ 241
Y+ YQASQNG+IGIT+ S W P A AA R +DF GW +P+T G YP SM+
Sbjct: 237 YKTKYQASQNGIIGITLVSHWFEPASKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMR 296
Query: 242 HLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEK 301
+LV RLPKF+ +++ + GS DFLGLNYY++ YA + +N T E
Sbjct: 297 YLVRKRLPKFSTEESKELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEH 356
Query: 302 NGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALND 361
NG PLG S WL IYP+GIR+ TENG + N + + +L D
Sbjct: 357 NGKPLGPMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLD 416
Query: 362 TVRVNYYNDHLSYILEAI 379
T R++YY HL Y+L AI
Sbjct: 417 TPRIDYYYRHLYYVLTAI 434
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/398 (48%), Positives = 253/398 (63%), Gaps = 21/398 (5%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
+ I +NGDVA + Y YKED+ ++K +G D+ RFSISWSR+LP G +SGGVN++G+++
Sbjct: 60 DMIRGGTNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINY 119
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YNNLI+ L++NG+ PFVTLFHWD PQALEDEYGGFLSP+IV DF +YA+LCF EFGDRVK
Sbjct: 120 YNNLIDGLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVK 179
Query: 123 HWITLNEPETVGECGYAKGTKAPG----------------RCSNYIGN--CPAGNSATEP 164
HW+TLNEP T GYA G APG RCS C GN TEP
Sbjct: 180 HWMTLNEPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEP 239
Query: 165 YVAAHHLILSHATAVKLYRQNYQASQNGLIGITVSSIWAVPKFPTVASE-KAAYRAIDFK 223
Y HHL+L+HA AV+LY+ +Q Q G IGI+ ++ W P AS+ +AA RA+DF
Sbjct: 240 YWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFM 299
Query: 224 FGWIFNPITYGSYPRSMQHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXX 283
GW PIT G YP+SM+ VG+RLPKF+ Q++M+KGS DF+GLNYYTA Y
Sbjct: 300 LGWFMEPITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNS 359
Query: 284 XXXXXXXXXXRVNRTKE--KNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXT 341
++ T E +NG P+G +GSDWL IYP+GIR+ T
Sbjct: 360 SGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVT 419
Query: 342 ENGVGDVNSSSWPISYALNDTVRVNYYNDHLSYILEAI 379
ENGV DV +++ +S A D++R+ Y DH+ + +A+
Sbjct: 420 ENGVDDVKNTNLTLSEARKDSMRLKYLQDHIFNVRQAM 457
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/398 (48%), Positives = 253/398 (63%), Gaps = 21/398 (5%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
+ I +NGDVA + Y YKED+ ++K +G D+ RFSISWSR+LP G +SGGVN++G+++
Sbjct: 60 DMIRGGTNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINY 119
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YNNLI+ L++NG+ PFVTLFHWD PQALEDEYGGFLSP+IV DF +YA+LCF EFGDRVK
Sbjct: 120 YNNLIDGLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVK 179
Query: 123 HWITLNEPETVGECGYAKGTKAPG----------------RCSNYIGN--CPAGNSATEP 164
HW+TLNEP T GYA G APG RCS C GN TEP
Sbjct: 180 HWMTLNEPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEP 239
Query: 165 YVAAHHLILSHATAVKLYRQNYQASQNGLIGITVSSIWAVPKFPTVASE-KAAYRAIDFK 223
Y HHL+L+HA AV+LY+ +Q Q G IGI+ ++ W P AS+ +AA RA+DF
Sbjct: 240 YWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFM 299
Query: 224 FGWIFNPITYGSYPRSMQHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXX 283
GW PIT G YP+SM+ VG+RLPKF+ Q++M+KGS DF+GLNYYTA Y
Sbjct: 300 LGWFMEPITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNS 359
Query: 284 XXXXXXXXXXRVNRTKE--KNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXT 341
++ T E +NG P+G +GSDWL IYP+GIR+ T
Sbjct: 360 SGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVT 419
Query: 342 ENGVGDVNSSSWPISYALNDTVRVNYYNDHLSYILEAI 379
ENGV DV +++ +S A D++R+ Y DH+ + +A+
Sbjct: 420 ENGVDDVKNTNLTLSEARKDSMRLKYLQDHIFNVRQAM 457
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 358 bits (918), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/398 (48%), Positives = 253/398 (63%), Gaps = 21/398 (5%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
+ I +NGDVA + Y YKED+ ++K +G D+ RFSISWSR+LP G +SGGVN++G+++
Sbjct: 60 DMIRGGTNGDVAVDSYHLYKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINY 119
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YNNLI+ L++NG+ PFVTLFHWD PQALEDEYGGFLSP+IV DF +YA+LCF EFGDRVK
Sbjct: 120 YNNLIDGLLANGIKPFVTLFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVK 179
Query: 123 HWITLNEPETVGECGYAKGTKAPG----------------RCSNYIGN--CPAGNSATEP 164
HW+TLN+P T GYA G APG RCS C GN TEP
Sbjct: 180 HWMTLNQPWTFSVHGYATGLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEP 239
Query: 165 YVAAHHLILSHATAVKLYRQNYQASQNGLIGITVSSIWAVPKFPTVASE-KAAYRAIDFK 223
Y HHL+L+HA AV+LY+ +Q Q G IGI+ ++ W P AS+ +AA RA+DF
Sbjct: 240 YWVTHHLLLAHAAAVELYKNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFM 299
Query: 224 FGWIFNPITYGSYPRSMQHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXX 283
GW PIT G YP+SM+ VG+RLPKF+ Q++M+KGS DF+GLNYYTA Y
Sbjct: 300 LGWFMEPITSGDYPKSMKKFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNS 359
Query: 284 XXXXXXXXXXRVNRTKE--KNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXT 341
++ T E +NG P+G +GSDWL IYP+GIR+ T
Sbjct: 360 SGSNNFSYNTDIHVTYETDRNGVPIGPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVT 419
Query: 342 ENGVGDVNSSSWPISYALNDTVRVNYYNDHLSYILEAI 379
ENGV DV +++ +S A D++R+ Y DH+ + +A+
Sbjct: 420 ENGVDDVKNTNLTLSEARKDSMRLKYLQDHIFNVRQAM 457
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 347 bits (890), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 177/380 (46%), Positives = 232/380 (61%), Gaps = 5/380 (1%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
KI D SN DVA + Y R++EDI L+ +G D+ RFSI+WSRI P+G G VNQ G+D Y
Sbjct: 55 KITDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYPNG--VGQVNQAGIDHY 112
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
N LI+ L++ G+ P+VTL+HWD PQALED+Y G+L +IV DF YA+ CF+EFGDRVKH
Sbjct: 113 NKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKH 172
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIG-NCPAGNSATEPYVAAHHLILSHATAVKLY 182
WITLNEP TV GY G +APGRCS + C AGNS TEPYV AHH IL+HA A +Y
Sbjct: 173 WITLNEPHTVAIQGYDAGLQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIY 232
Query: 183 RQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQH 242
R Y+A+QNG +GI +W P T +AA RA +F+ GW +P +G YP +M+
Sbjct: 233 RTKYKATQNGQLGIAFDVMWFEPMSNTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRA 292
Query: 243 LVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKE-- 300
VG RLP+FT +A +VKG++DF+G+N+YT Y
Sbjct: 293 RVGERLPRFTADEAAVVKGALDFVGINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPF 352
Query: 301 KNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALN 360
KNG P+G S WL I P+G+R TENG+ D N+ I AL
Sbjct: 353 KNGKPIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALK 412
Query: 361 DTVRVNYYNDHLSYILEAIK 380
D+ R+ Y+ND+L+ + +IK
Sbjct: 413 DSKRIKYHNDYLTNLAASIK 432
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 224/376 (59%), Gaps = 4/376 (1%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
KI D SNG+ A N Y YKEDI ++KQ G +S RFSISWSR+LP G ++ GVN+ GV FY
Sbjct: 82 KISDGSNGNQAINCYHMYKEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFY 141
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
++ I+EL++NG+ P VTLFHWD PQALEDEYGGFLS +IV DF +YA+ CF EFGD++K+
Sbjct: 142 HDFIDELLANGIKPSVTLFHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKY 201
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W T NEP T GYA G APGR G G+ A EPYV H+++L+H AV+ YR
Sbjct: 202 WTTFNEPHTFAVNGYALGEFAPGRG----GKGDEGDPAIEPYVVTHNILLAHKAAVEEYR 257
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
+Q Q G IGI ++S+W P A A RA+DF GW P+T G YP+SM+ L
Sbjct: 258 NKFQKCQEGEIGIVLNSMWMEPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMREL 317
Query: 244 VGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNG 303
V RLPKF+ +E +KG DF+G+NYYTA Y +V +T E+N
Sbjct: 318 VKGRLPKFSADDSEKLKGCYDFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTFERNQ 377
Query: 304 FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTV 363
P+G W + P G+ + TE+G+ + N + +S A D
Sbjct: 378 KPIGHALYGGWQHVVPWGLYKLLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAE 437
Query: 364 RVNYYNDHLSYILEAI 379
R +Y+ HL+ + +AI
Sbjct: 438 RTDYHQKHLASVRDAI 453
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/376 (45%), Positives = 221/376 (58%), Gaps = 9/376 (2%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
+ + NGDVA + Y RYKED+ L+K + FD+ RFSISWSRI P G G VNQ+GV +YN
Sbjct: 59 VAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDG--EGRVNQEGVAYYN 116
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLIN L+ G+TP+V L+H+D P ALE +YGG+L+ K+ F +YAD CFK FG+RVKHW
Sbjct: 117 NLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHW 176
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAG-NSATEPYVAAHHLILSHATAVKLYR 183
T NEP V GY +GT P RC+ C AG NSATEPY+ AH+ +LSHA AV YR
Sbjct: 177 FTFNEPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYR 232
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
YQA+Q G +GI + W + + AA RA DF GW +P+ G YP+ MQ L
Sbjct: 233 TKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDL 292
Query: 244 VGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNG 303
V +RLPKFT QA +VKGS D++G+N YTA Y + +V KNG
Sbjct: 293 VKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNG 352
Query: 304 FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTV 363
P+G S+WL I P G+ TENG+ + S L DT
Sbjct: 353 KPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLS--RDQYLRDTT 410
Query: 364 RVNYYNDHLSYILEAI 379
RV++Y +L+ + +AI
Sbjct: 411 RVHFYRSYLTQLKKAI 426
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 318 bits (816), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/380 (40%), Positives = 230/380 (60%), Gaps = 4/380 (1%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E I+D SNGDVA + Y Y ED+ L+K++G D+ RFSISW RILP G ++GG+N++ V++
Sbjct: 114 EWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEY 173
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YN LI+ L+ NG+ P++T+FHWDTPQAL D YGGFL +I+KD+ D+A +CF++FG +VK
Sbjct: 174 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVK 233
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIG-NCPAGNSATEPYVAAHHLILSHATAVKL 181
+W+T NEPET Y G APGRCS + P GNS +EPY+ AH+L+ +HA V +
Sbjct: 234 NWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDI 293
Query: 182 YRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQ 241
Y + Y +G IG+ ++ VP T ++A R++D GW P+ G YP SM+
Sbjct: 294 YNK-YHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMR 352
Query: 242 HLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXX--XXXXXXXXXXXRVNRTK 299
+R+P F + + E + GS D +G+NYYT+ +++ + TK
Sbjct: 353 VSARDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETK 412
Query: 300 EKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYAL 359
+G +G PTG+ W+++YPKG+ + TENG+GD++ P AL
Sbjct: 413 GPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVAL 472
Query: 360 NDTVRVNYYNDHLSYILEAI 379
D R++Y HLS + ++I
Sbjct: 473 EDHTRLDYIQRHLSVLKQSI 492
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/376 (44%), Positives = 221/376 (58%), Gaps = 9/376 (2%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
+ + NGDVA + Y RYKED+ L+K + FD+ RFSISWSRI P G G VNQ+GV +YN
Sbjct: 59 VAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDG--EGRVNQEGVAYYN 116
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLIN L+ G+TP+V L+H+D P ALE +YGG+L+ K+ F +YAD CFK FG+RVKHW
Sbjct: 117 NLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHW 176
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAG-NSATEPYVAAHHLILSHATAVKLYR 183
T N+P V GY +GT P RC+ C AG NSATEPY+ AH+ +LSHA AV YR
Sbjct: 177 FTFNQPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYR 232
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
YQA+Q G +GI + W + + AA RA DF GW +P+ G YP+ MQ L
Sbjct: 233 TKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDL 292
Query: 244 VGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNG 303
V +RLPKFT QA +VKGS D++G+N YTA Y + +V KNG
Sbjct: 293 VKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNG 352
Query: 304 FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTV 363
P+G S+WL I P G+ TENG+ + S L DT
Sbjct: 353 KPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITENGMDQPANLS--RDQYLRDTT 410
Query: 364 RVNYYNDHLSYILEAI 379
RV++Y +L+ + +AI
Sbjct: 411 RVHFYRSYLTQLKKAI 426
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 230/380 (60%), Gaps = 4/380 (1%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E I+D SNGDVA + Y Y ED+ L+K++G D+ RFSISW RILP G ++GG+N++GV++
Sbjct: 114 EWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEY 173
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YN LI+ L+ NG+ P++T+FHWDTPQAL + YGGFL +I+KD+ D+A +CF++FG VK
Sbjct: 174 YNKLIDLLLENGIEPYITIFHWDTPQALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVK 233
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIG-NCPAGNSATEPYVAAHHLILSHATAVKL 181
+W+T N+PET Y G APGRCS + P GNS +EPY+ AH+L+ +HA V +
Sbjct: 234 NWLTFNDPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDI 293
Query: 182 YRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQ 241
Y + Y +G IG+ ++ VP T ++A R++D GW P+ G YP SM+
Sbjct: 294 YNK-YHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMR 352
Query: 242 HLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXX--XXXXXXXXXXXRVNRTK 299
+R+P F + + E + GS D +G+NYYT+ +++ + TK
Sbjct: 353 VSARDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETK 412
Query: 300 EKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYAL 359
+G +G PTG+ W+++YPKG+ + TENG+GD++ P AL
Sbjct: 413 GPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVAL 472
Query: 360 NDTVRVNYYNDHLSYILEAI 379
D R++Y HLS + ++I
Sbjct: 473 EDHTRLDYIQRHLSVLKQSI 492
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 169/376 (44%), Positives = 220/376 (58%), Gaps = 9/376 (2%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
+ + NGDVA + Y RYKED+ L+K + FD+ RFSISWSRI P G G VNQ+GV +YN
Sbjct: 59 VAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDG--EGRVNQEGVAYYN 116
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLIN L+ G+TP+V L+H+D P ALE +YGG+L+ K+ F +YAD CFK FG+RVKHW
Sbjct: 117 NLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHW 176
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAG-NSATEPYVAAHHLILSHATAVKLYR 183
T NEP V GY +GT P RC+ C AG NSATEPY+ AH+ +LSHA AV YR
Sbjct: 177 FTFNEPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYR 232
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
YQA+Q G +GI + W + + AA RA DF GW +P+ G YP+ MQ L
Sbjct: 233 TKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDL 292
Query: 244 VGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNG 303
V +RLPKFT QA +VKGS D++G+N YTA Y + +V KNG
Sbjct: 293 VKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNG 352
Query: 304 FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTV 363
P+G S+WL I P G+ T NG+ + S L DT
Sbjct: 353 KPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITSNGMDQPANLS--RDQYLRDTT 410
Query: 364 RVNYYNDHLSYILEAI 379
RV++Y +L+ + +AI
Sbjct: 411 RVHFYRSYLTQLKKAI 426
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 317 bits (812), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 154/380 (40%), Positives = 229/380 (60%), Gaps = 4/380 (1%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E I+D SNGDVA + Y Y ED+ L+K++G D+ RFSISW RILP G ++GG+N++ V++
Sbjct: 114 EWIVDRSNGDVAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEY 173
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YN LI+ L+ NG+ P++T+FHWDTPQAL D YGGFL +I+KD+ D+A +CF++FG VK
Sbjct: 174 YNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVK 233
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIG-NCPAGNSATEPYVAAHHLILSHATAVKL 181
+W+T NEPET Y G APGRCS + P GNS +EPY+ AH+L+ +HA V +
Sbjct: 234 NWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDI 293
Query: 182 YRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQ 241
Y + Y +G IG+ ++ VP T ++A R++D GW P+ G YP SM+
Sbjct: 294 YNK-YHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMR 352
Query: 242 HLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXX--XXXXXXXXXXXRVNRTK 299
+R+P F + + E + GS D +G+NYYT+ +++ + TK
Sbjct: 353 VSARDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETK 412
Query: 300 EKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYAL 359
+G +G PTG+ W+++YPKG+ + TENG+GD++ P AL
Sbjct: 413 GPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVAL 472
Query: 360 NDTVRVNYYNDHLSYILEAI 379
D R++Y HLS + ++I
Sbjct: 473 EDHTRLDYIQRHLSVLKQSI 492
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 317 bits (812), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 169/376 (44%), Positives = 220/376 (58%), Gaps = 9/376 (2%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
+ + NGDVA + Y RYKED+ L+K + FD+ RFSISWSRI P G G VNQ+GV +YN
Sbjct: 59 VAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDG--EGRVNQEGVAYYN 116
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLIN L+ G+TP+V L+H+D P ALE +YGG+L+ K+ F +YAD CFK FG+RVKHW
Sbjct: 117 NLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHW 176
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAG-NSATEPYVAAHHLILSHATAVKLYR 183
T NEP V GY +GT P RC+ C AG NSATEPY+ AH+ +LSHA AV YR
Sbjct: 177 FTFNEPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYR 232
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
YQA+Q G +GI + W + + AA RA DF GW +P+ G YP+ MQ L
Sbjct: 233 TKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDL 292
Query: 244 VGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNG 303
V +RLPKFT QA +VKGS D++G+N YTA Y + +V KNG
Sbjct: 293 VKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNG 352
Query: 304 FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTV 363
P+G S+WL I P G+ T NG+ + S L DT
Sbjct: 353 KPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITANGMDQPANLS--RDQYLRDTT 410
Query: 364 RVNYYNDHLSYILEAI 379
RV++Y +L+ + +AI
Sbjct: 411 RVHFYRSYLTQLKKAI 426
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 317 bits (811), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 169/376 (44%), Positives = 220/376 (58%), Gaps = 9/376 (2%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
+ + NGDVA + Y RYKED+ L+K + FD+ RFSISWSRI P G G VNQ+GV +YN
Sbjct: 59 VAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDG--EGRVNQEGVAYYN 116
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLIN L+ G+TP+V L+H+D P ALE +YGG+L+ K+ F +YAD CFK FG+RVKHW
Sbjct: 117 NLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHW 176
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAG-NSATEPYVAAHHLILSHATAVKLYR 183
T NEP V GY +GT P RC+ C AG NSATEPY+ AH+ +LSHA AV YR
Sbjct: 177 FTFNEPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYR 232
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
YQA+Q G +GI + W + + AA RA DF GW +P+ G YP+ MQ L
Sbjct: 233 TKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDL 292
Query: 244 VGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNG 303
V +RLPKFT QA +VKGS D++G+N YTA Y + +V KNG
Sbjct: 293 VKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTAVFAKNG 352
Query: 304 FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTV 363
P+G S+WL I P G+ T NG+ + S L DT
Sbjct: 353 KPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNGMDQPANLS--RDQYLRDTT 410
Query: 364 RVNYYNDHLSYILEAI 379
RV++Y +L+ + +AI
Sbjct: 411 RVHFYRSYLTQLKKAI 426
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/376 (44%), Positives = 220/376 (58%), Gaps = 9/376 (2%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
+ + NGDVA + Y RYKED+ L+K + FD+ RFSISWSRI P G G VNQ+GV +YN
Sbjct: 59 VAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDG--EGRVNQEGVAYYN 116
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLIN L+ G+TP+V L+H+D P ALE +YGG+L+ K+ F +YAD CFK FG+RVKHW
Sbjct: 117 NLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHW 176
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAG-NSATEPYVAAHHLILSHATAVKLYR 183
T NEP V GY +GT P RC+ C AG NSATEPY+ AH+ +LSHA AV YR
Sbjct: 177 FTFNEPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYR 232
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
YQA+Q G +GI + W + + AA RA DF GW +P+ G YP+ MQ L
Sbjct: 233 TKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDL 292
Query: 244 VGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNG 303
V +RLPKFT QA +VKGS D++G+N YTA Y + +V KNG
Sbjct: 293 VKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNG 352
Query: 304 FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTV 363
P+G S+WL I P G+ T NG+ + S L DT
Sbjct: 353 KPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNGMDQPANLS--RDQYLRDTT 410
Query: 364 RVNYYNDHLSYILEAI 379
RV++Y +L+ + +AI
Sbjct: 411 RVHFYRSYLTQLKKAI 426
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 316 bits (810), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/376 (44%), Positives = 220/376 (58%), Gaps = 9/376 (2%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
+ + NGDVA + Y RYKED+ L+K + FD+ RFSISWSRI P G G VNQ+GV +YN
Sbjct: 59 VAGNQNGDVATDQYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDG--EGRVNQEGVAYYN 116
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLIN L+ G+TP+V L+H+D P ALE +YGG+L+ K+ F +YAD CFK FG+RVKHW
Sbjct: 117 NLINYLLQKGITPYVNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHW 176
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAG-NSATEPYVAAHHLILSHATAVKLYR 183
T NEP V GY +GT P RC+ C AG NSATEPY+ AH+ +LSHA AV YR
Sbjct: 177 FTFNEPRIVALLGYDQGTNPPKRCTK----CAAGGNSATEPYIVAHNFLLSHAAAVARYR 232
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
YQA+Q G +GI + W + + AA RA DF GW +P+ G YP+ MQ L
Sbjct: 233 TKYQAAQQGKVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDL 292
Query: 244 VGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNG 303
V +RLPKFT QA +VKGS D++G+N YTA Y + +V KNG
Sbjct: 293 VKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYAADWQVTYVFAKNG 352
Query: 304 FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTV 363
P+G S+WL I P G+ T NG+ + S L DT
Sbjct: 353 KPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVITGNGMDQPANLS--RDQYLRDTT 410
Query: 364 RVNYYNDHLSYILEAI 379
RV++Y +L+ + +AI
Sbjct: 411 RVHFYRSYLTQLKKAI 426
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 311 bits (797), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/381 (41%), Positives = 230/381 (60%), Gaps = 8/381 (2%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E+I D +NGDVA N Y Y+ED+ +K +G RFSISWSRILP+G +G NQ+G+D+
Sbjct: 112 ERISDGTNGDVAANSYHMYEEDVKALKDMGMKVYRFSISWSRILPNG--TGKPNQKGIDY 169
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YNNLIN LI +G+ P+VT++HWDTPQALED+YGGFL +IV D+ +A+LCF+ FGDRVK
Sbjct: 170 YNNLINSLIRHGIVPYVTIWHWDTPQALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVK 229
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIGNC--PAGNSATEPYVAAHHLILSHATAVK 180
+W T NEP T Y +G APGRCS + +C P G+S EPY A HH++L+HA AV+
Sbjct: 230 NWFTFNEPHTYCCFSYGEGIHAPGRCSPGL-DCAVPEGDSLREPYTAGHHILLAHAEAVE 288
Query: 181 LYRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSM 240
L++ +Y + IG+ + P + ++A R+ID+ GW P+ G YP SM
Sbjct: 289 LFKAHYNKHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSM 348
Query: 241 QHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAE--EVXXXXXXXXXXXXXXRVNRT 298
+ L+G+RLP FTK + E + S D +GLNYYT+ +++ ++ + T
Sbjct: 349 RSLIGDRLPMFTKEEQEKLASSCDIMGLNYYTSRFSKHVDISSDYTPTLNTDDAYASSET 408
Query: 299 KEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYA 358
+G +G TG+ W+ +YPKG+ + TENG+ DV +
Sbjct: 409 TGSDGNEIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPIFITENGIADVEGDP-EMPDP 467
Query: 359 LNDTVRVNYYNDHLSYILEAI 379
L+D R++Y H+S + +AI
Sbjct: 468 LDDWKRLDYLQRHISAVKDAI 488
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 310 bits (795), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/381 (41%), Positives = 226/381 (59%), Gaps = 8/381 (2%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E+I D +NGDVA N Y Y+ED+ +K +G RFSISWSRILP G +G VNQ G+D+
Sbjct: 112 ERISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDG--TGKVNQAGIDY 169
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YN LIN LI N + P+VT++HWDTPQALED+YGGFL+ +IV D+ +A++CFK FGDRVK
Sbjct: 170 YNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVK 229
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIGNC--PAGNSATEPYVAAHHLILSHATAVK 180
+W T NEP T Y +G APGRCS + +C P G+S EPY A HH++L+HA AV+
Sbjct: 230 NWFTFNEPHTYCCFSYGEGIHAPGRCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQ 288
Query: 181 LYRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSM 240
L++ Y + IG+ + P + ++A R+ID+ GW P+ G YP SM
Sbjct: 289 LFKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSM 348
Query: 241 QHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXX--XXXXXXXXXXRVNRT 298
+ L+G+RLP FTK + E + S D +GLNYYT+ +++ V + T
Sbjct: 349 RSLIGDRLPMFTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSET 408
Query: 299 KEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYA 358
+G +G TG+ W+ +YPKG+ + TENG+ DV +
Sbjct: 409 TGSDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDE-SMPDP 467
Query: 359 LNDTVRVNYYNDHLSYILEAI 379
L+D R++Y H+S + +AI
Sbjct: 468 LDDWKRLDYLQRHISAVKDAI 488
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 308 bits (790), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/381 (41%), Positives = 225/381 (59%), Gaps = 8/381 (2%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E+I D +NGDVA N Y Y+ED+ +K +G RFSISWSRILP G +G VNQ G+D+
Sbjct: 112 ERISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDG--TGKVNQAGIDY 169
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YN LIN LI N + P+VT++HWDTPQALED+YGGFL+ +IV D+ +A++CFK FGDRVK
Sbjct: 170 YNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVK 229
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIGNC--PAGNSATEPYVAAHHLILSHATAVK 180
+W T N P T Y +G APGRCS + +C P G+S EPY A HH++L+HA AV+
Sbjct: 230 NWFTFNAPHTYCCFSYGEGIHAPGRCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQ 288
Query: 181 LYRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSM 240
L++ Y + IG+ + P + ++A R+ID+ GW P+ G YP SM
Sbjct: 289 LFKARYNMHGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSM 348
Query: 241 QHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXX--XXXXXXXXXXRVNRT 298
+ L+G+RLP FTK + E + S D +GLNYYT+ +++ V + T
Sbjct: 349 RSLIGDRLPMFTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSET 408
Query: 299 KEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYA 358
+G +G TG+ W+ +YPKG+ + TENG+ DV +
Sbjct: 409 TGSDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDE-SMPDP 467
Query: 359 LNDTVRVNYYNDHLSYILEAI 379
L+D R++Y H+S + +AI
Sbjct: 468 LDDWKRLDYLQRHISAVKDAI 488
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 305 bits (780), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 226/386 (58%), Gaps = 11/386 (2%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E+ILD SN D+ N Y YK D+ L+K++G D+ RFSISW RILP G GG+N G+ +
Sbjct: 57 ERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKY 116
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLS---PKIVKDFGDYADLCFKEFGD 119
Y NLIN L+ NG+ P+VT+FHWD PQALE++YGGFL IV+D+ +A +CF FGD
Sbjct: 117 YRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGD 176
Query: 120 RVKHWITLNEPETVGECGYAKGTKAPGRCSNYIGNC--PAGNSATEPYVAAHHLILSHAT 177
+VK+W+T NEP+T Y G APGRCS + +C P GNS EPY A H+++L+HA
Sbjct: 177 KVKNWLTFNEPQTFTSFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAE 235
Query: 178 AVKLYRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYP 237
AV LY ++Y+ + IG+ + VP + ++A R+ D GW P+ G YP
Sbjct: 236 AVDLYNKHYK-RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYP 294
Query: 238 RSMQHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAE--EVXXXXXXXXXXXXXXRV 295
SM+ L RLP F Q E + GS + LGLNYYT+ +++ ++
Sbjct: 295 FSMRSLARERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYAS 354
Query: 296 NRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNS--SSW 353
+G P+G P G+ W+ +YP+G+++ TENG+GDV++ +
Sbjct: 355 QEVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPL 414
Query: 354 PISYALNDTVRVNYYNDHLSYILEAI 379
P+ ALND R++Y H++ + E+I
Sbjct: 415 PMEAALNDYKRLDYIQRHIATLKESI 440
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 305 bits (780), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 226/386 (58%), Gaps = 11/386 (2%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E+ILD SN D+ N Y YK D+ L+K++G D+ RFSISW RILP G GG+N G+ +
Sbjct: 62 ERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKY 121
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLS---PKIVKDFGDYADLCFKEFGD 119
Y NLIN L+ NG+ P+VT+FHWD PQALE++YGGFL IV+D+ +A +CF FGD
Sbjct: 122 YRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGD 181
Query: 120 RVKHWITLNEPETVGECGYAKGTKAPGRCSNYIGNC--PAGNSATEPYVAAHHLILSHAT 177
+VK+W+T NEP+T Y G APGRCS + +C P GNS EPY A H+++L+HA
Sbjct: 182 KVKNWLTFNEPQTFTSFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAE 240
Query: 178 AVKLYRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYP 237
AV LY ++Y+ + IG+ + VP + ++A R+ D GW P+ G YP
Sbjct: 241 AVDLYNKHYK-RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYP 299
Query: 238 RSMQHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAE--EVXXXXXXXXXXXXXXRV 295
SM+ L RLP F Q E + GS + LGLNYYT+ +++ ++
Sbjct: 300 FSMRSLARERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYAS 359
Query: 296 NRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNS--SSW 353
+G P+G P G+ W+ +YP+G+++ TENG+GDV++ +
Sbjct: 360 QEVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPL 419
Query: 354 PISYALNDTVRVNYYNDHLSYILEAI 379
P+ ALND R++Y H++ + E+I
Sbjct: 420 PMEAALNDYKRLDYIQRHIATLKESI 445
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 226/386 (58%), Gaps = 11/386 (2%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E+ILD SN D+ N Y YK D+ L+K++G D+ RFSISW RILP G GG+N G+ +
Sbjct: 62 ERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKY 121
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLS---PKIVKDFGDYADLCFKEFGD 119
Y NLIN L+ NG+ P+VT+FHWD PQALE++YGGFL IV+D+ +A +CF FGD
Sbjct: 122 YRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGD 181
Query: 120 RVKHWITLNEPETVGECGYAKGTKAPGRCSNYIGNC--PAGNSATEPYVAAHHLILSHAT 177
+VK+W+T N+P+T Y G APGRCS + +C P GNS EPY A H+++L+HA
Sbjct: 182 KVKNWLTFNDPQTFTSVSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAE 240
Query: 178 AVKLYRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYP 237
AV LY ++Y+ + IG+ + VP + ++A R+ D GW P+ G YP
Sbjct: 241 AVDLYNKHYK-RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYP 299
Query: 238 RSMQHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAE--EVXXXXXXXXXXXXXXRV 295
SM+ L RLP F Q E + GS + LGLNYYT+ +++ ++
Sbjct: 300 FSMRSLARERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYAS 359
Query: 296 NRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNS--SSW 353
+G P+G P G+ W+ +YP+G+++ TENG+GDV++ +
Sbjct: 360 QEVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPL 419
Query: 354 PISYALNDTVRVNYYNDHLSYILEAI 379
P+ ALND R++Y H++ + E+I
Sbjct: 420 PMEAALNDYKRLDYIQRHIATLKESI 445
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 303 bits (776), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 226/386 (58%), Gaps = 11/386 (2%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E+ILD SN D+ N Y YK D+ L+K++G D+ RFSISW RILP G GG+N G+ +
Sbjct: 62 ERILDGSNSDIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKY 121
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLS---PKIVKDFGDYADLCFKEFGD 119
Y NLIN L+ NG+ P+VT+FHWD PQALE++YGGFL IV+D+ +A +CF FGD
Sbjct: 122 YRNLINLLLENGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGD 181
Query: 120 RVKHWITLNEPETVGECGYAKGTKAPGRCSNYIGNC--PAGNSATEPYVAAHHLILSHAT 177
+VK+W+T N+P+T Y G APGRCS + +C P GNS EPY A H+++L+HA
Sbjct: 182 KVKNWLTFNDPQTFTSFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAE 240
Query: 178 AVKLYRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYP 237
AV LY ++Y+ + IG+ + VP + ++A R+ D GW P+ G YP
Sbjct: 241 AVDLYNKHYK-RDDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYP 299
Query: 238 RSMQHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAE--EVXXXXXXXXXXXXXXRV 295
SM+ L RLP F Q E + GS + LGLNYYT+ +++ ++
Sbjct: 300 FSMRSLARERLPFFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYAS 359
Query: 296 NRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNS--SSW 353
+G P+G P G+ W+ +YP+G+++ TENG+GDV++ +
Sbjct: 360 QEVNGPDGKPIGPPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPL 419
Query: 354 PISYALNDTVRVNYYNDHLSYILEAI 379
P+ ALND R++Y H++ + E+I
Sbjct: 420 PMEAALNDYKRLDYIQRHIATLKESI 445
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 293 bits (751), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 216/377 (57%), Gaps = 19/377 (5%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
KI D S+GDVA + Y R++ED+ L+K G + RFS+SWSRI+P G S VN G+ Y
Sbjct: 47 KIADGSSGDVATDSYNRWREDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHY 106
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPK-IVKDFGDYADLCFKEFGDRVK 122
LI EL+ G+TPFVTL+HWD PQAL+D YGG+L+ + ++DF +YA LCF+ FGD V+
Sbjct: 107 RTLIEELVKEGITPFVTLYHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQ 166
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLY 182
+WIT NEP + GY G APG SN TEP++ +HH+IL+HA AVKLY
Sbjct: 167 NWITFNEPWVISVMGYGNGIFAPGHVSN-----------TEPWIVSHHIILAHAHAVKLY 215
Query: 183 RQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQH 242
R ++ Q G IGIT+ S W +P T AS++A RA++FK G NPI G YP ++
Sbjct: 216 RDEFKEKQGGQIGITLDSHWLIPYDDTDASKEATLRAMEFKLGRFANPIYKGEYPPRIKK 275
Query: 243 LVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKN 302
++G+RLP+FT + E+VKGS DF GLN YT ++ R + T+
Sbjct: 276 ILGDRLPEFTPEEIELVKGSSDFFGLNTYTTHLVQDGGSDELAGFVKTGHTRADGTQ--- 332
Query: 303 GFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDT 362
LG + WL Y G R TENG + P+ A++DT
Sbjct: 333 ---LGTQSDMGWLQTYGPGFR-WLLNYLWKAYDKPVYVTENGFPVKGENDLPVEQAVDDT 388
Query: 363 VRVNYYNDHLSYILEAI 379
R YY D+ +L+A+
Sbjct: 389 DRQAYYRDYTEALLQAV 405
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 290 bits (742), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 218/385 (56%), Gaps = 15/385 (3%)
Query: 7 DHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNL 66
DH NGD + + +++DI ++ ++ RFSI+WSRI+P G S GVNQ+G+D+Y+ L
Sbjct: 65 DHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGL 124
Query: 67 INELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWIT 126
I+ LI G+TPFVTLFHWD PQ L+DEY GFL P+I+ DF DYADLCF+EFGD VK+W+T
Sbjct: 125 IDGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLT 184
Query: 127 LNEPETVGECGYAKGTKAPGRCSNYIG-NCPAGNSATEPYVAAHHLILSHATAVKLYRQN 185
+N+ +V GY APGRCS + +C AGNS+TEPY+ AHH +L+HA V LYR+N
Sbjct: 185 INQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKN 244
Query: 186 YQASQNGLIGITVSSIWAVPKFPTVASEKAAY-RAIDFKFGWIFNPITYGSYPRSMQHLV 244
Y Q G IG T+ + W +P T AA R F GW P+T G+YP+ M V
Sbjct: 245 Y-THQGGKIGPTMITRWFLPYNDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTV 303
Query: 245 GNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAE------EVXXXXXXXXXXXXXXRVNRT 298
G RLP F+ + +VKGS DFLGLNYY YA+ +N +
Sbjct: 304 GARLPTFSPEETNLVKGSYDFLGLNYYFTQYAQPSPNPVNATNHTAMMDAGAKLTYINAS 363
Query: 299 KEKNGFPLGQPTGSDWLS---IYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPI 355
G PL + G D S YPKGI TENG+ S +
Sbjct: 364 GHYIG-PLFESDGGDGSSNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGSENRKE 422
Query: 356 SYALNDTVRVNYYNDHLSYILEAIK 380
S + D R++Y HL ++ + IK
Sbjct: 423 S--MLDYTRIDYLCSHLCFLNKVIK 445
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 221/387 (57%), Gaps = 19/387 (4%)
Query: 7 DHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNL 66
DH NGD + + +++DI ++ ++ RFSI+WSRI+P G S GVN++G+D+Y+ L
Sbjct: 63 DHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGL 122
Query: 67 INELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWIT 126
I+ LI G+TPFVTLFHWD PQ L+DEY GFL P+I+ DF DYADLCF+EFGD VK+W+T
Sbjct: 123 ISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLT 182
Query: 127 LNEPETVGECGYAKGTKAPGRCSNYIG-NCPAGNSATEPYVAAHHLILSHATAVKLYRQN 185
+N+ +V GY APGRCS + +C AGNS+TEPY+ AHH +L+HA V LYR+N
Sbjct: 183 INQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKN 242
Query: 186 YQASQNGLIGITVSSIWAVPKFPTVASEKAAY-RAIDFKFGWIFNPITYGSYPRSMQHLV 244
Y Q G IG T+ + W +P T AA R +F GW P+T G+YP+ M V
Sbjct: 243 Y-THQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTV 301
Query: 245 GNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAE------EVXXXXXXXXXXXXXXRVNRT 298
G RLP F+ ++ +VKGS DFLGLNYY YA+ +N +
Sbjct: 302 GERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINAS 361
Query: 299 KEKNG--FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGV---GDVNSSSW 353
G F + +D + YPKGI TENG+ GD N +
Sbjct: 362 GHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQ- 420
Query: 354 PISYALNDTVRVNYYNDHLSYILEAIK 380
++ D R++Y HL ++ + IK
Sbjct: 421 ----SMLDYTRIDYLCSHLCFLNKVIK 443
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 221/387 (57%), Gaps = 19/387 (4%)
Query: 7 DHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNL 66
DH NGD + + +++DI ++ ++ RFSI+WSRI+P G S GVN++G+D+Y+ L
Sbjct: 65 DHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGL 124
Query: 67 INELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWIT 126
I+ LI G+TPFVTLFHWD PQ L+DEY GFL P+I+ DF DYADLCF+EFGD VK+W+T
Sbjct: 125 ISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLT 184
Query: 127 LNEPETVGECGYAKGTKAPGRCSNYIG-NCPAGNSATEPYVAAHHLILSHATAVKLYRQN 185
+N+ +V GY APGRCS + +C AGNS+TEPY+ AHH +L+HA V LYR+N
Sbjct: 185 INQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKN 244
Query: 186 YQASQNGLIGITVSSIWAVPKFPTVASEKAAY-RAIDFKFGWIFNPITYGSYPRSMQHLV 244
Y Q G IG T+ + W +P T AA R +F GW P+T G+YP+ M V
Sbjct: 245 Y-THQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTV 303
Query: 245 GNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAE------EVXXXXXXXXXXXXXXRVNRT 298
G RLP F+ ++ +VKGS DFLGLNYY YA+ +N +
Sbjct: 304 GERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINAS 363
Query: 299 KEKNG--FPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGV---GDVNSSSW 353
G F + +D + YPKGI TENG+ GD N +
Sbjct: 364 GHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQ- 422
Query: 354 PISYALNDTVRVNYYNDHLSYILEAIK 380
++ D R++Y HL ++ + IK
Sbjct: 423 ----SMLDYTRIDYLCSHLCFLNKVIK 445
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 199/380 (52%), Gaps = 17/380 (4%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
KI D S+G A + Y R EDIAL+K +G S RFSISWSRI+P G VNQ G+D Y
Sbjct: 47 KIADGSSGVTACDSYNRTAEDIALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHY 106
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLS-PKIVKDFGDYADLCFKEFGDRVK 122
+++L+ G+TPF+TLFHWD P+ L YGG L+ + DF +YA + F+ +V+
Sbjct: 107 VKFVDDLLDAGITPFITLFHWDLPEGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVR 165
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLY 182
+WIT NEP GY GT APGR S +EP+ H+++++H AVK Y
Sbjct: 166 NWITFNEPLCSAIPGYGSGTFAPGR-----------QSTSEPWTVGHNILVAHGRAVKAY 214
Query: 183 RQNYQ-ASQNGLIGITVSSIWAVP-KFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSM 240
R +++ AS +G IGI ++ + P A ++AA R ++F W +PI G YP SM
Sbjct: 215 RDDFKPASGDGQIGIVLNGDFTYPWDAADPADKEAAERRLEFFTAWFADPIYLGDYPASM 274
Query: 241 QHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKE 300
+ +G+RLP FT + +V GS DF G+N+YT++Y + K+
Sbjct: 275 RKQLGDRLPTFTPEERALVHGSNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQ 334
Query: 301 KNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALN 360
N +G T S WL G R+ TENG S P L
Sbjct: 335 GNC--IGPETQSPWLRPCAAGFRDFLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILE 392
Query: 361 DTVRVNYYNDHLSYILEAIK 380
D RV YYN+++ ++ A++
Sbjct: 393 DDFRVKYYNEYIRAMVTAVE 412
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 203/373 (54%), Gaps = 26/373 (6%)
Query: 11 GDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINEL 70
GDVA + Y R+KEDI +++++G + RFSISW RILP G +G VNQ+G+DFYN +I+ L
Sbjct: 58 GDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG--TGRVNQKGLDFYNRIIDTL 115
Query: 71 ISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEP 130
+ G+TPFVT+FHWD P AL+ + GG L+ +I F +Y+ + F+ FGDRVK+WIT NEP
Sbjct: 116 LEKGITPFVTIFHWDLPFALQLK-GGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEP 174
Query: 131 ETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQ 190
GY GT APGR S +EP+ H+++++H AVK++R+ +
Sbjct: 175 LCSAIPGYGSGTFAPGR-----------QSTSEPWTVGHNILVAHGRAVKVFRETVK--- 220
Query: 191 NGLIGITVSSIWAVP-KFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHLVGNRLP 249
+G IGI ++ + P A ++AA R ++F W +PI G YP SM+ +G+RLP
Sbjct: 221 DGKIGIVLNGDFTYPWDAADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLP 280
Query: 250 KFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNGFPLGQP 309
FT + +V GS DF G+N+YT++Y + K+ N +G
Sbjct: 281 TFTPEERALVHGSNDFYGMNHYTSNYIRHRSSPASADDTVGNVDVLFTNKQGNC--IGPE 338
Query: 310 TGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVG--DVNSSSWPISYALNDTVRVNY 367
T WL G R+ TENG DV S + +D R++Y
Sbjct: 339 TAMPWLRPCAAGFRDFLVWISKRYGYPPIYVTENGAAFDDVVSEDGRV----HDQNRIDY 394
Query: 368 YNDHLSYILEAIK 380
++ ++ A++
Sbjct: 395 LKAYIGAMVTAVE 407
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 204/388 (52%), Gaps = 40/388 (10%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
++D + GD+AD+ Y YKED+ ++K++G RFSISW+R+LP G+ VNQ G+D+YN
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLINEL++NG+ P VT++HWD PQAL+D GG+ + + K +YA + FK FGDRVK W
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNS-ATEPYVAAHHLILSHATAVKLYR 183
+T NEP T + GYA + IG P+ N+ Y+AAH +I +HA LY
Sbjct: 170 LTFNEPLTFMD-GYA----------SEIGMAPSINTPGIGDYLAAHTVIHAHARIYHLYD 218
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPI--TYGSYPRSMQ 241
Q ++A Q G +GI+++ W P + + F G +PI G YP ++
Sbjct: 219 QEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLK 278
Query: 242 HLVG----------NRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXX 291
V +RLP+FT + E ++G+ DFLG+N+YTA +
Sbjct: 279 DRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRDS 338
Query: 292 XXRVNRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSS 351
+ + +P+ + S WL + P G R+ TENG D
Sbjct: 339 GVILTQDA---AWPI---SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-- 390
Query: 352 SWPISYALNDTVRVNYYNDHLSYILEAI 379
LNDT RV+YY +HL +L+AI
Sbjct: 391 ------GLNDTGRVHYYTEHLKEMLKAI 412
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 204/388 (52%), Gaps = 40/388 (10%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
++D + GD+AD+ Y YKED+ ++K++G RFSISW+R+LP G+ VNQ G+D+YN
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLINEL++NG+ P VT++HWD PQAL+D GG+ + + K +YA + FK FGDRVK W
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNS-ATEPYVAAHHLILSHATAVKLYR 183
+T N+P T + GYA + IG P+ N+ Y+AAH +I +HA LY
Sbjct: 170 LTFNDPLTFMD-GYA----------SEIGMAPSINTPGIGDYLAAHTVIHAHARIYHLYD 218
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPI--TYGSYPRSMQ 241
Q ++A Q G +GI+++ W P + + F G +PI G YP ++
Sbjct: 219 QEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLK 278
Query: 242 HLVG----------NRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXX 291
V +RLP+FT + E ++G+ DFLG+N+YTA +
Sbjct: 279 DRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRDS 338
Query: 292 XXRVNRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSS 351
+ + +P+ + S WL + P G R+ TENG D
Sbjct: 339 GVILTQDA---AWPI---SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-- 390
Query: 352 SWPISYALNDTVRVNYYNDHLSYILEAI 379
LNDT RV+YY +HL +L+AI
Sbjct: 391 ------GLNDTGRVHYYTEHLKEMLKAI 412
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 203/388 (52%), Gaps = 40/388 (10%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
++D + GD+AD+ Y YKED+ ++K++G RFSISW+R+LP G+ VNQ G+D+YN
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLINEL++NG+ P VT++HWD PQAL+D GG+ + + K +YA + FK FGDRVK W
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNS-ATEPYVAAHHLILSHATAVKLYR 183
+T N P T + GYA + IG P+ N+ Y+AAH +I +HA LY
Sbjct: 170 LTFNSPLTFMD-GYA----------SEIGMAPSINTPGIGDYLAAHTVIHAHARIYHLYD 218
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPI--TYGSYPRSMQ 241
Q ++A Q G +GI+++ W P + + F G +PI G YP ++
Sbjct: 219 QEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLK 278
Query: 242 HLVG----------NRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXX 291
V +RLP+FT + E ++G+ DFLG+N+YTA +
Sbjct: 279 DRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRDS 338
Query: 292 XXRVNRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSS 351
+ + +P+ + S WL + P G R+ TENG D
Sbjct: 339 GVILTQDA---AWPI---SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-- 390
Query: 352 SWPISYALNDTVRVNYYNDHLSYILEAI 379
LNDT RV+YY +HL +L+AI
Sbjct: 391 ------GLNDTGRVHYYTEHLKEMLKAI 412
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 203/388 (52%), Gaps = 40/388 (10%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
++D + GD+AD+ Y YKED+ ++K++G RFSISW+R+LP G+ VNQ G+D+YN
Sbjct: 52 VVDGATGDIADDSYHLYKEDVKILKELGAQVYRFSISWARVLPEGH-DNIVNQDGIDYYN 110
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
NLINEL++NG+ P VT++HWD PQAL+D GG+ + + K +YA + FK FGDRVK W
Sbjct: 111 NLINELLANGIEPMVTMYHWDLPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLW 169
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNS-ATEPYVAAHHLILSHATAVKLYR 183
+T N P T + GYA + IG P+ N+ Y+AAH +I +HA LY
Sbjct: 170 LTFNAPLTFMD-GYA----------SEIGMAPSINTPGIGDYLAAHTVIHAHARIYHLYD 218
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPI--TYGSYPRSMQ 241
Q ++A Q G +GI+++ W P + + F G +PI G YP ++
Sbjct: 219 QEFRAEQGGKVGISLNINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLK 278
Query: 242 HLVG----------NRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXX 291
V +RLP+FT + E ++G+ DFLG+N+YTA +
Sbjct: 279 DRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRDS 338
Query: 292 XXRVNRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSS 351
+ + +P+ + S WL + P G R+ TENG D
Sbjct: 339 GVILTQDA---AWPI---SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG-- 390
Query: 352 SWPISYALNDTVRVNYYNDHLSYILEAI 379
LNDT RV+YY +HL +L+AI
Sbjct: 391 ------GLNDTGRVHYYTEHLKEMLKAI 412
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 197/390 (50%), Gaps = 37/390 (9%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E++ + GDVA Y ++ED+ +KQ+G RFS+SWSR+LP G +G +NQ+G+D+
Sbjct: 41 ERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGT-TGFINQKGIDY 99
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YN +I++L+ NG+TP VTL+H+D PQ LED+ GG+LS I++ F YA CF FGDRVK
Sbjct: 100 YNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVK 158
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLY 182
WIT+NE + Y G PG + T Y AAH+LI +HA + Y
Sbjct: 159 QWITINEANVLSVMSYDLGMFPPG----------IPHFGTGGYQAAHNLIKAHARSWHSY 208
Query: 183 RQNYQASQNGLIGITVSSIWAVPKFP-TVASEKAAYRAIDFKFGWIFNPITY-GSYPRSM 240
++ Q G++ +++ ++W P P +V+ ++AA RAI F PI G YP +
Sbjct: 209 DSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVV 268
Query: 241 QHLVG----------NRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXX 290
+ + +RLP+FT+ + +M+KG+ DF + YYT +
Sbjct: 269 KSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIK-------YQENKK 321
Query: 291 XXXRVNRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNS 350
+ + E FP DW+ + P G+ + TENG +
Sbjct: 322 GELGILQDAEIEFFPDPSWINVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDP 381
Query: 351 SSWPISYALNDTVRVNYYNDHLSYILEAIK 380
+ L+DT R Y+ + +AI+
Sbjct: 382 A------PLDDTQRWEYFRQTFQELFKAIQ 405
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 197/390 (50%), Gaps = 37/390 (9%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E++ + GDVA Y ++ED+ +KQ+G RFS+SWSR+LP G +G +NQ+G+D+
Sbjct: 41 ERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGT-TGFINQKGIDY 99
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YN +I++L+ NG+TP VTL+H+D PQ LED+ GG+LS I++ F YA CF FGDRVK
Sbjct: 100 YNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVK 158
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLY 182
WIT+NE + Y G PG + T Y AAH+LI +HA + Y
Sbjct: 159 QWITINEANVLSVMSYDLGMFPPG----------IPHFGTGGYQAAHNLIKAHARSWHSY 208
Query: 183 RQNYQASQNGLIGITVSSIWAVPKFP-TVASEKAAYRAIDFKFGWIFNPITY-GSYPRSM 240
++ Q G++ +++ ++W P P +V+ ++AA RAI F PI G YP +
Sbjct: 209 DSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVV 268
Query: 241 QHLVG----------NRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXX 290
+ + +RLP+FT+ + +M+KG+ DF + YYT +
Sbjct: 269 KSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIK-------YQENKK 321
Query: 291 XXXRVNRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNS 350
+ + E FP DW+ + P G+ + TENG +
Sbjct: 322 GELGILQDAEIEFFPDPSWKNVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDP 381
Query: 351 SSWPISYALNDTVRVNYYNDHLSYILEAIK 380
+ L+DT R Y+ + +AI+
Sbjct: 382 A------PLDDTQRWEYFRQTFQELFKAIQ 405
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 197/390 (50%), Gaps = 37/390 (9%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E++ + GDVA Y ++ED+ +KQ+G RFS+SWSR+LP G +G +NQ+G+D+
Sbjct: 41 ERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGT-TGFINQKGIDY 99
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YN +I++L+ NG+TP VTL+H+D PQ LED+ GG+LS I++ F YA CF FGDRVK
Sbjct: 100 YNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVK 158
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLY 182
WIT+N+ + Y G PG + T Y AAH+LI +HA + Y
Sbjct: 159 QWITINQANVLSVMSYDLGMFPPG----------IPHFGTGGYQAAHNLIKAHARSWHSY 208
Query: 183 RQNYQASQNGLIGITVSSIWAVPKFP-TVASEKAAYRAIDFKFGWIFNPITY-GSYPRSM 240
++ Q G++ +++ ++W P P +V+ ++AA RAI F PI G YP +
Sbjct: 209 DSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVV 268
Query: 241 QHLVG----------NRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXX 290
+ + +RLP+FT+ + +M+KG+ DF + YYT +
Sbjct: 269 KSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIK-------YQENKK 321
Query: 291 XXXRVNRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNS 350
+ + E FP DW+ + P G+ + TENG +
Sbjct: 322 GELGILQDAEIEFFPDPSWKNVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDP 381
Query: 351 SSWPISYALNDTVRVNYYNDHLSYILEAIK 380
+ L+DT R Y+ + +AI+
Sbjct: 382 A------PLDDTQRWEYFRQTFQELFKAIQ 405
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 201/388 (51%), Gaps = 38/388 (9%)
Query: 3 EKILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDF 62
E I D +NGD+A + Y +YKED+A++K + RFSISW+RI P G + + +G+ +
Sbjct: 43 EVIKDGTNGDIACDSYHKYKEDVAIIKDLNLKFYRFSISWARIAPSG-VMNSLEPKGIAY 101
Query: 63 YNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVK 122
YNNLINELI N + P VT++HWD PQ L+D GG+++P + F +YA + F FGDRVK
Sbjct: 102 YNNLINELIKNDIIPLVTMYHWDLPQYLQD-LGGWVNPIMSDYFKEYARVLFTYFGDRVK 160
Query: 123 HWITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLY 182
WIT NEP V + GY+ AP G+ Y+A H +++H A +LY
Sbjct: 161 WWITFNEPIAVCK-GYSIKAYAPNLNLKTTGH----------YLAGHTQLIAHGKAYRLY 209
Query: 183 RQNYQASQNGLIGITVSSIWAVPKFPTVASE-KAAYRAIDFKFGWIFNPITYGSYPRSMQ 241
+ ++ +QNG I I++S ++ +PK + + A RA F+ GW +P+ G YP M+
Sbjct: 210 EEMFKPTQNGKISISISGVFFMPKNAESDDDIETAERANQFERGWFGHPVYKGDYPPIMK 269
Query: 242 HLVG----------NRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXX 291
V ++LPKFTK + +++KG+ DF LN+Y++
Sbjct: 270 KWVDQKSKEEGLPWSKLPKFTKDEIKLLKGTADFYALNHYSSRLV--TFGSDPNPNFNPD 327
Query: 292 XXRVNRTKEKNGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSS 351
V E +P + ++ P+G+R+ TENG GD
Sbjct: 328 ASYVTSVDEA----WLKPNETPYIIPVPEGLRKLLIWLKNEYGNPQLLITENGYGDDGQ- 382
Query: 352 SWPISYALNDTVRVNYYNDHLSYILEAI 379
L+D +++Y ++L+ L+A+
Sbjct: 383 -------LDDFEKISYLKNYLNATLQAM 403
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 183/376 (48%), Gaps = 42/376 (11%)
Query: 10 NGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINE 69
NGD+A + Y RYKED+ L+K +G S RFSI+W RI P G G +NQ+G+ FY +LI+E
Sbjct: 50 NGDIACDHYHRYKEDVQLLKSLGIKSYRFSIAWPRIFPKG--FGEINQKGIQFYRDLIDE 107
Query: 70 LISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNE 129
LI N + P +T++HWD PQ L+D GG+ +P++ + DYA+L F+EFGDRVK WIT NE
Sbjct: 108 LIKNDIEPAITIYHWDLPQKLQD-IGGWANPQVADYYVDYANLLFREFGDRVKTWITHNE 166
Query: 130 PETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQAS 189
P GYA G APG +AAH+++LSH AVK YR +
Sbjct: 167 PWVASYLGYALGVHAPGI-----------KDMKMALLAAHNILLSHFKAVKAYR---ELE 212
Query: 190 QNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHLVG--NR 247
Q+G IGIT++ AA+R+ + W + G+YP M + N
Sbjct: 213 QDGQIGITLNLSTCYSNSADEEDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNI 272
Query: 248 LPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNGFPLG 307
+P+ K V + DFLG+NYYT +V ++ K + G+
Sbjct: 273 MPELPKELFTEVFETSDFLGINYYT----RQVVKNNSEAFIGAESVAMDNPKTEMGW--- 325
Query: 308 QPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVG---DVNSSSWPISYALNDTVR 364
IYP+G+ + TENG VN + D R
Sbjct: 326 --------EIYPQGLYDLLTRIHRDYGNIDLYITENGAAFNDMVNRDG-----KVEDENR 372
Query: 365 VNYYNDHLSYILEAIK 380
++Y H + L AI+
Sbjct: 373 LDYLYTHFAAALSAIE 388
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 157/273 (57%), Gaps = 21/273 (7%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
K+ + NG+VA + Y R +ED+ L+K +G RFSISW R+LP G +G VN+ G+D+Y
Sbjct: 43 KVKNGDNGNVACDSYHRVEEDVQLLKDLGVKVYRFSISWPRVLPQG--TGEVNRAGLDYY 100
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
+ L++EL++NG+ PF TL+HWD PQAL+D+ GG+ S + F +YA+L FKE G ++K
Sbjct: 101 HRLVDELLANGIEPFCTLYHWDLPQALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQ 159
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYV-AAHHLILSHATAVKLY 182
WIT NEP + SNY+G GN + + +HHL+++H AV L+
Sbjct: 160 WITFNEPWCM------------AFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLF 207
Query: 183 RQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQH 242
R + +G IGI ++ WAVP T +A R + W +PI +G YP+ M
Sbjct: 208 R---ELGISGEIGIAPNTSWAVPYRRTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLD 264
Query: 243 LVGNR--LPKFTKSQAEMVKGSVDFLGLNYYTA 273
N P E++ +DF+G+NYYT+
Sbjct: 265 WYENLGYKPPIVDGDMELIHQPIDFIGINYYTS 297
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 181/379 (47%), Gaps = 34/379 (8%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
KI + GD+A + Y Y+EDI L+K++G S RFS SW RILP G G VNQ+G+DFY
Sbjct: 51 KIENGDTGDIACDHYHLYREDIELMKEIGIRSYRFSTSWPRILPEG--KGRVNQKGLDFY 108
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
L++ L+ + P +TL+HWD PQAL+D+ GG+ + K F +YA L F+EF V
Sbjct: 109 KRLVDNLLKANIRPMITLYHWDLPQALQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDL 167
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W+T NEP V G+A G APG AHHL+LSH AV ++R
Sbjct: 168 WVTHNEPWVVAFEGHAFGNHAPGT-----------KDFKTALQVAHHLLLSHGMAVDIFR 216
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
+ G IGIT++ A P + KAA D+ W +P+ GSYP + H+
Sbjct: 217 EE---DLPGEIGITLNLTPAYPAGDSEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHI 273
Query: 244 VGNRLPKFTKSQAEM--VKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEK 301
L FT +M + +DFLG+NYY+ V + +++
Sbjct: 274 YEQNLGAFTTQPGDMDIISRDIDFLGINYYSR------MVVRHKPGDNLFNAEVVKMEDR 327
Query: 302 NGFPLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALND 361
+G W IYP+G+ + TENG + + ++D
Sbjct: 328 PSTEMG------W-EIYPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLT--EEGKIHD 378
Query: 362 TVRVNYYNDHLSYILEAIK 380
R+NY DH +A+K
Sbjct: 379 EKRINYLGDHFKQAYKALK 397
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 187 bits (475), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 158/269 (58%), Gaps = 28/269 (10%)
Query: 11 GDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINEL 70
GDVA + Y R+KEDI +++++G + RFSISW RILP G +G VNQ+G+DFYN +I+ L
Sbjct: 73 GDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEG--TGRVNQKGLDFYNRIIDTL 130
Query: 71 ISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEP 130
+ G+TPFVT++HWD P AL+ + GG+ + +I F +Y+ + F+ FGDRVK+WITLNEP
Sbjct: 131 LEKGITPFVTIYHWDLPFALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEP 189
Query: 131 ETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQ 190
V G+ G APG Y+ + A H+L+ +HA AVK++R + +
Sbjct: 190 WVVAIVGHLYGVHAPGMRDIYVA-----------FRAVHNLLRAHARAVKVFR---ETVK 235
Query: 191 NGLIGITVSSIWAVPKFPTVASEKAA-YRAIDF-----KFGWIFNPITYGSYPRSMQHLV 244
+G IGI ++ + P ASEK RA+ F + NPI G YP +
Sbjct: 236 DGKIGIVFNNGYFEP-----ASEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFA 290
Query: 245 GNRLPKFTKSQAEMVKGSVDFLGLNYYTA 273
LP+ K ++ +DF+GLNYY+
Sbjct: 291 REYLPENYKDDMSEIQEKIDFVGLNYYSG 319
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 150/271 (55%), Gaps = 19/271 (7%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
K+ + NG+VA + Y RY+EDI L+K++G + RFS+SW RI P+G+ G VNQ+G+D+Y
Sbjct: 44 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNGD--GEVNQEGLDYY 101
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
+ +++ L NG+ PF TL+HWD PQAL+D GG+ + + ++ F +A+ F+EF +++H
Sbjct: 102 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 160
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W+T NEP + G APG +N G HHL+++H +V+ +R
Sbjct: 161 WLTFNEPWCIAFLSNMLGVHAPG-LTNLQTAIDVG----------HHLLVAHGLSVRRFR 209
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
+ +G IGI + WAVP + + A R I W PI GSYP+ +
Sbjct: 210 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 266
Query: 244 VGNRLPKFTKSQAEM--VKGSVDFLGLNYYT 272
+ +M + +D +G+NYY+
Sbjct: 267 FAEQGATVPIQDGDMDIIGEPIDMIGINYYS 297
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 150/271 (55%), Gaps = 19/271 (7%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
K+ + NG+VA + Y RY+EDI L+K++G + RFS+SW RI P+G+ G VNQ+G+D+Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNGD--GEVNQEGLDYY 100
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
+ +++ L NG+ PF TL+HWD PQAL+D GG+ + + ++ F +A+ F+EF +++H
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W+T NEP + G APG +N G HHL+++H +V+ +R
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG-LTNLQTAIDVG----------HHLLVAHGLSVRRFR 208
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
+ +G IGI + WAVP + + A R I W PI GSYP+ +
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 265
Query: 244 VGNRLPKFTKSQAEM--VKGSVDFLGLNYYT 272
+ +M + +D +G+NYY+
Sbjct: 266 FAEQGATVPIQDGDMDIIGEPIDMIGINYYS 296
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 150/271 (55%), Gaps = 19/271 (7%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
K+ + NG+VA + Y RY+EDI L+K++G + RFS+SW RI P+G+ G VNQ+G+D+Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNGD--GEVNQEGLDYY 100
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
+ +++ L NG+ PF TL+HWD PQAL+D GG+ + + ++ F +A+ F+EF +++H
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W+T NEP + G APG +N G HHL+++H +V+ +R
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG-LTNLQTAIDVG----------HHLLVAHGLSVRRFR 208
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
+ +G IGI + WAVP + + A R I W PI GSYP+ +
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 265
Query: 244 VGNRLPKFTKSQAEM--VKGSVDFLGLNYYT 272
+ +M + +D +G+NYY+
Sbjct: 266 FAEQGATVPIQDGDMDIIGEPIDMIGINYYS 296
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 150/271 (55%), Gaps = 19/271 (7%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
K+ + NG+VA + Y RY+EDI L+K++G + RFS+SW RI P+G+ G VNQ+G+D+Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNGD--GEVNQKGLDYY 100
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
+ +++ L NG+ PF TL+HWD PQAL+D GG+ + + ++ F +A+ F+EF +++H
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W+T NEP + G APG +N G HHL+++H +V+ +R
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG-LTNLQTAIDVG----------HHLLVAHGLSVRRFR 208
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
+ +G IGI + WAVP + + A R I W PI GSYP+ +
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 265
Query: 244 VGNRLPKFTKSQAEM--VKGSVDFLGLNYYT 272
+ +M + +D +G+NYY+
Sbjct: 266 FAEQGATVPIQDGDMDIIGEPIDMIGINYYS 296
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 150/271 (55%), Gaps = 19/271 (7%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
K+ + NG+VA + Y RY+EDI L+K++G + RFS+SW RI P+G+ G VNQ+G+D+Y
Sbjct: 43 KVFNGDNGNVACDSYHRYEEDIRLMKELGIRTYRFSVSWPRIFPNGD--GEVNQKGLDYY 100
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
+ +++ L NG+ PF TL+HWD PQAL+D GG+ + + ++ F +A+ F+EF +++H
Sbjct: 101 HRVVDLLNDNGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQH 159
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W+T NEP + G APG +N G HHL+++H +V+ +R
Sbjct: 160 WLTFNEPWCIAFLSNMLGVHAPG-LTNLQTAIDVG----------HHLLVAHGLSVRRFR 208
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
+ +G IGI + WAVP + + A R I W PI GSYP+ +
Sbjct: 209 ---ELGTSGQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDW 265
Query: 244 VGNRLPKFTKSQAEM--VKGSVDFLGLNYYT 272
+ +M + +D +G+NYY+
Sbjct: 266 FAEQGATVPIQDGDMDIIGEPIDMIGINYYS 296
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 144/277 (51%), Gaps = 31/277 (11%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
K++ GDVA + + +KED+ L+KQ+GF RFS++W RI+P I +N++G+ FY
Sbjct: 52 KVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPAAGI---INEEGLLFY 108
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
+L++E+ GL P +TL+HWD PQ +EDE GG+ + ++ F YA + FG+R+
Sbjct: 109 EHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINW 167
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W T+NEP GY G APG + E + AAHH+++ H A L++
Sbjct: 168 WNTINEPYCASILGYGTGEHAPGH-----------ENWREAFTAAHHILMCHGIASNLHK 216
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEK-----AAYRAIDFKFGWIFNPITYGSYPR 238
+ G IGIT++ + ASE+ AA R F W P+ G YP
Sbjct: 217 EK---GLTGKIGITLNM-----EHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPE 268
Query: 239 SMQHLVG---NRLPKFTKSQAEMVKGSVDFLGLNYYT 272
M G N L E+++ DFLG+NYYT
Sbjct: 269 DMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYT 305
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 144/277 (51%), Gaps = 31/277 (11%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
K++ GDVA + + +KED+ L+KQ+GF RFS++W RI+P I +N++G+ FY
Sbjct: 50 KVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPAAGI---INEEGLLFY 106
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
+L++E+ GL P +TL+HWD PQ +EDE GG+ + ++ F YA + FG+R+
Sbjct: 107 EHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINW 165
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W T+NEP GY G APG + E + AAHH+++ H A L++
Sbjct: 166 WNTINEPYCASILGYGTGEHAPGH-----------ENWREAFTAAHHILMCHGIASNLHK 214
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEK-----AAYRAIDFKFGWIFNPITYGSYPR 238
+ G IGIT++ + ASE+ AA R F W P+ G YP
Sbjct: 215 EK---GLTGKIGITLNM-----EHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPE 266
Query: 239 SMQHLVG---NRLPKFTKSQAEMVKGSVDFLGLNYYT 272
M G N L E+++ DFLG+NYYT
Sbjct: 267 DMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYT 303
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 164 bits (414), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 144/277 (51%), Gaps = 31/277 (11%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
K++ GDVA + + +KED+ L+KQ+GF RFS++W RI+P I +N++G+ FY
Sbjct: 52 KVIGGDCGDVACDHFHHFKEDVQLMKQLGFLHYRFSVAWPRIMPAAGI---INEEGLLFY 108
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
+L++E+ GL P +TL+HWD PQ +EDE GG+ + ++ F YA + FG+R+
Sbjct: 109 EHLLDEIELAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINW 167
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W T+NEP GY G APG + E + AAHH+++ H A L++
Sbjct: 168 WNTINEPYCASILGYGTGEHAPGH-----------ENWREAFTAAHHILMCHGIASNLHK 216
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEK-----AAYRAIDFKFGWIFNPITYGSYPR 238
+ G IGIT++ + ASE+ AA R F W P+ G YP
Sbjct: 217 EK---GLTGKIGITLNM-----EHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPE 268
Query: 239 SMQHLVG---NRLPKFTKSQAEMVKGSVDFLGLNYYT 272
M G N L E+++ DFLG+NYYT
Sbjct: 269 DMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYT 305
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 172/380 (45%), Gaps = 42/380 (11%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
KI + +GDVA + Y RY++D+ L++Q+G + RFSI+W+RI P + S +NQ+G+DFY
Sbjct: 43 KIKNGDSGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQP--DSSRQINQRGLDFY 100
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
L+ L + P TL+HWD PQ +EDE GG+LS + F +Y GD++
Sbjct: 101 RRLVEGLHKRDILPMATLYHWDLPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPL 159
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W+T NEP GY G APG +G AHHL+LSH A++ +R
Sbjct: 160 WVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGR-----------VAHHLLLSHGQALQAFR 208
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
A I + ++I+ V P A +AA R F+ P+ G Y ++
Sbjct: 209 ALSPAGSQMGITLNFNTIYPVSAEP--ADVEAARRMHSFQNELFLEPLIRGQYNQATLMA 266
Query: 244 VGNRLPKFTKSQ-AEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKN 302
N LP+F + + + +DFLG+NYY RV + +
Sbjct: 267 YPN-LPEFIAPEDMQTISAPIDFLGVNYYNP-------------------MRVKSSPQPP 306
Query: 303 GFPLGQ---PTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYAL 359
G + Q P + I P+G+ + TENG + S +
Sbjct: 307 GIEVVQVESPVTAMGWEIAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQPD--QSGQV 364
Query: 360 NDTVRVNYYNDHLSYILEAI 379
ND RV Y+ H+ A+
Sbjct: 365 NDPQRVGYFQGHIGAARRAL 384
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 172/380 (45%), Gaps = 42/380 (11%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
KI + +GDVA + Y RY++D+ L++Q+G + RFSI+W+RI P + S +NQ+G+DFY
Sbjct: 64 KIKNGDSGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQP--DSSRQINQRGLDFY 121
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
L+ L + P TL+HWD PQ +EDE GG+LS + F +Y GD++
Sbjct: 122 RRLVEGLHKRDILPMATLYHWDLPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPL 180
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYR 183
W+T NEP GY G APG +G AHHL+LSH A++ +R
Sbjct: 181 WVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGR-----------VAHHLLLSHGQALQAFR 229
Query: 184 QNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHL 243
A I + ++I+ V P A +AA R F+ P+ G Y ++
Sbjct: 230 ALSPAGSQMGITLNFNTIYPVSAEP--ADVEAARRMHSFQNELFLEPLIRGQYNQATLMA 287
Query: 244 VGNRLPKFTKSQ-AEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKN 302
N LP+F + + + +DFLG+NYY RV + +
Sbjct: 288 YPN-LPEFIAPEDMQTISAPIDFLGVNYYNP-------------------MRVKSSPQPP 327
Query: 303 GFPLGQ---PTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYAL 359
G + Q P + I P+G+ + TENG + S +
Sbjct: 328 GIEVVQVESPVTAMGWEIAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQPD--QSGQV 385
Query: 360 NDTVRVNYYNDHLSYILEAI 379
ND RV Y+ H+ A+
Sbjct: 386 NDPQRVGYFQGHIGAARRAL 405
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 172/387 (44%), Gaps = 33/387 (8%)
Query: 4 KILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFY 63
++ + GDVA + Y R++ED+AL+ ++G + RFS++W RI P G G Q+G+DFY
Sbjct: 56 RVRNGDTGDVATDHYHRWREDVALMAELGLGAYRFSLAWPRIQPTGR--GPALQKGLDFY 113
Query: 64 NNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKH 123
L +EL++ G+ P TL+HWD PQ LE+ GG+ + F +YA + GDRVK
Sbjct: 114 RRLADELLAKGIQPVATLYHWDLPQELENA-GGWPERATAERFAEYAAIAADALGDRVKT 172
Query: 124 WITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYV---AAHHLILSHATAVK 180
W TLNEP GY G APGR T+P AAHHL L H AV+
Sbjct: 173 WTTLNEPWCSAFLGYGSGVHAPGR--------------TDPVAALRAAHHLNLGHGLAVQ 218
Query: 181 LYRQNYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFN-PITYGSYPRS 239
R A + + + V ++ A R ID +F P+ G+YP
Sbjct: 219 ALRDRLPADAQCSVTLNIHH---VRPLTDSDADADAVRRIDALANRVFTGPMLQGAYPED 275
Query: 240 M-QHLVGNRLPKFTKS-QAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVN- 296
+ + G F + + +DFLG+NYY+ E +
Sbjct: 276 LVKDTAGLTDWSFVRDGDLRLAHQKLDFLGVNYYSPTLVSEADGSGTHNSDGHGRSAHSP 335
Query: 297 -RTKEKNGF--PLGQPTGSDWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSW 353
++ F P G+ T W ++ P G+ E TENG + +
Sbjct: 336 WPGADRVAFHQPPGETTAMGW-AVDPSGLYELLRRLSSDFPALPLVITENGAAFHDYAD- 393
Query: 354 PISYALNDTVRVNYYNDHLSYILEAIK 380
+ND R+ Y DHL+ + AIK
Sbjct: 394 -PEGNVNDPERIAYVRDHLAAVHRAIK 419
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 140/268 (52%), Gaps = 25/268 (9%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
I D S G+ A + Y RY+EDIAL++ +G + RFS++W RILP G G +N +G+ FY+
Sbjct: 43 IRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILPEGR--GRINPKGLAFYD 100
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
L++ L+++G+TPF+TL+HWD P ALE E GG+ S + F +YA+ + DRV +
Sbjct: 101 RLVDRLLASGITPFLTLYHWDLPLALE-ERGGWRSRETAFAFAEYAEAVARALADRVPFF 159
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQ 184
TLNEP G+ G APG + N A AAHHL+L H AV+ R
Sbjct: 160 ATLNEPWCSAFLGHWTGEHAPG-----LRNLEAALR------AAHHLLLGHGLAVEALR- 207
Query: 185 NYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHLV 244
A+ +GI ++ A + P Y F +PI YP S
Sbjct: 208 ---AAGARRVGIVLNFAPAYGEDPEAVDVADRYHNRFF-----LDPILGKGYPES-PFRD 258
Query: 245 GNRLPKFTKSQAEMVKGSVDFLGLNYYT 272
+P ++ E+V +DFLG+NYY
Sbjct: 259 PPPVPILSR-DLELVARPLDFLGVNYYA 285
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 140/268 (52%), Gaps = 25/268 (9%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
I D S G+ A + Y RY+EDIAL++ +G + RFS++W RILP G G +N +G+ FY+
Sbjct: 43 IRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILPEGR--GRINPKGLAFYD 100
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
L++ L+++G+TPF+TL+HWD P ALE E GG+ S + F +YA+ + DRV +
Sbjct: 101 RLVDRLLASGITPFLTLYHWDLPLALE-ERGGWRSRETAFAFAEYAEAVARALADRVPFF 159
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQ 184
TLNEP G+ G APG + N A AAHHL+L H AV+ R
Sbjct: 160 ATLNEPWCSAFLGHWTGEHAPG-----LRNLEAALR------AAHHLLLGHGLAVEALR- 207
Query: 185 NYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHLV 244
A+ +GI ++ A + P Y F +PI YP S
Sbjct: 208 ---AAGARRVGIVLNFAPAYGEDPEAVDVADRYHNRFF-----LDPILGKGYPES-PFRD 258
Query: 245 GNRLPKFTKSQAEMVKGSVDFLGLNYYT 272
+P ++ E+V +DFLG+NYY
Sbjct: 259 PPPVPILSRD-LELVARPLDFLGVNYYA 285
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 139/270 (51%), Gaps = 29/270 (10%)
Query: 5 ILDHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYN 64
I D S G+ A + Y RY+EDIAL++ +G RFS++W RILP G G +N +G+ FY+
Sbjct: 43 IRDGSTGEPACDHYHRYEEDIALMQSLGVGVYRFSVAWPRILPEGR--GRINPKGLAFYD 100
Query: 65 NLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHW 124
L++ L++ G+TPF+TL+HWD PQALED GG+ S + F +YA+ + DRV +
Sbjct: 101 RLVDRLLAAGITPFLTLYHWDLPQALEDR-GGWRSRETAFAFAEYAEAVARALADRVPFF 159
Query: 125 ITLNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQ 184
TLNEP G+ G APG + N A AAHHL+L H AV+ R
Sbjct: 160 ATLNEPWCSAFLGHWTGEHAPG-----LRNLEAALR------AAHHLLLGHGLAVEALR- 207
Query: 185 NYQASQNGLIGITVSSIWAVPKFPTVASEKAAYRAID-FKFGWIFNPITYGSYPRSMQHL 243
A+ +GI ++ P + A D + + +PI YP S
Sbjct: 208 ---AAGARRVGIVLNFA------PAYGEDPEAVDVADRYHNRYFLDPILGRGYPESPFQ- 257
Query: 244 VGNRLPKFTKSQ-AEMVKGSVDFLGLNYYT 272
+ P S+ E + +DFLG+NYY
Sbjct: 258 --DPPPAPILSRDLEAIARPLDFLGVNYYA 285
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 178/386 (46%), Gaps = 45/386 (11%)
Query: 14 ADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISN 73
A +FY +Y D+ L ++ G + IR SI+WSRI P G G VN++GV+FY+ L E
Sbjct: 49 ASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG--YGEVNEKGVEFYHKLFAECHKR 106
Query: 74 GLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV 133
+ PFVTL H+DTP+AL G FL+ + ++ F DYA CF+EF + V +W T NE +
Sbjct: 107 HVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPI 164
Query: 134 GECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGL 193
G+ Y G PG + + + + H++++SHA AVKLY+ G
Sbjct: 165 GDGQYLVGKFPPGIKYD----------LAKVFQSHHNMMVSHARAVKLYKDK---GYKGE 211
Query: 194 IGITVSSIWAVP-KFPTVASEKAAYRAIDFKF----GWIFNPITYGSYP-RSMQ---HLV 244
IG+ + A+P K+P A RA + + +I + G Y ++M+ H++
Sbjct: 212 IGV----VHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHIL 267
Query: 245 GNR-----LPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTK 299
L + K DFLG+NYY +D+ + ++ +
Sbjct: 268 AENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQ 327
Query: 300 EKNGFPLGQP-----TGSDWLSIYPKGIREXXXXXXXXX-XXXXXXXTENGVGDVNSSSW 353
K P T DW+ IYP+G+ + TENG+G +
Sbjct: 328 IKGVGRRVAPDYVPRTDWDWI-IYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEF-- 384
Query: 354 PISYALNDTVRVNYYNDHLSYILEAI 379
+ + D R++Y HL + +AI
Sbjct: 385 -VDNTVYDDGRIDYVKQHLEVLSDAI 409
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 178/386 (46%), Gaps = 45/386 (11%)
Query: 14 ADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISN 73
A +FY +Y D+ L ++ G + IR SI+WSRI P G G VN++GV+FY+ L E
Sbjct: 49 ASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG--YGEVNEKGVEFYHKLFAECHKR 106
Query: 74 GLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV 133
+ PFVTL H+DTP+AL G FL+ + ++ F DYA CF+EF + V +W T NE +
Sbjct: 107 HVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPI 164
Query: 134 GECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGL 193
G+ Y G PG + + + + H++++SHA AVKLY+ G
Sbjct: 165 GDGQYLVGKFPPGIKYD----------LAKVFQSHHNMMVSHARAVKLYKDK---GYKGE 211
Query: 194 IGITVSSIWAVP-KFPTVASEKAAYRAIDFKF----GWIFNPITYGSY-PRSMQ---HLV 244
IG+ + A+P K+P A RA + + +I + G Y ++M+ H++
Sbjct: 212 IGV----VHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYCDKTMEGVNHIL 267
Query: 245 GNR-----LPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTK 299
L + K DFLG+NYY +D+ + ++ +
Sbjct: 268 AENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQ 327
Query: 300 EKNGFPLGQP-----TGSDWLSIYPKGIREXXXXXXXXX-XXXXXXXTENGVGDVNSSSW 353
K P T DW+ IYP+G+ + TENG+G +
Sbjct: 328 IKGVGRRVAPDYVPRTDWDWI-IYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEF-- 384
Query: 354 PISYALNDTVRVNYYNDHLSYILEAI 379
+ + D R++Y HL + +AI
Sbjct: 385 -VDNTVYDDGRIDYVKQHLEVLSDAI 409
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 142/278 (51%), Gaps = 35/278 (12%)
Query: 14 ADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISN 73
A +FY +Y D+ L ++ G + IR SI+WSRI P G G VN++GV+FY+ L E
Sbjct: 49 ASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTG--YGEVNEKGVEFYHKLFAECHKR 106
Query: 74 GLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV 133
+ PFVTL H+DTP+AL G FL+ + ++ F DYA CF+EF + V +W T NE +
Sbjct: 107 HVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPI 164
Query: 134 GECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGL 193
G+ Y G PG + + + + H++++SHA AVKLY+ G
Sbjct: 165 GDGQYLVGKFPPGIKYD----------LAKVFQSHHNMMVSHARAVKLYKDK---GYKGE 211
Query: 194 IGITVSSIWAVP-KFPTVASEKAAYRAIDFKF----GWIFNPITYGSYP-RSMQ---HLV 244
IG+ + A+P K+P A RA + + +I + G Y ++M+ H++
Sbjct: 212 IGV----VHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHIL 267
Query: 245 GNR-----LPKFTKSQAEMVKGSVDFLGLNYYTADYAE 277
L + K DFLG+NYY +D+ +
Sbjct: 268 AENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQ 305
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 177/372 (47%), Gaps = 33/372 (8%)
Query: 14 ADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISN 73
A +FY RY EDI L + GF R SI+W+RI P+G+ S N+ G+ FY++L +E + N
Sbjct: 69 AIDFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEP-NEAGLQFYDDLFDECLKN 127
Query: 74 GLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNE--PE 131
G+ P VTL H++ P L +YGG+ + K+++ + ++A +CF+ + D+V +W T NE +
Sbjct: 128 GIQPVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNEINNQ 187
Query: 132 TVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQN 191
T E A T + I + P N Y AAH+ +++ A AV+L +Q + +
Sbjct: 188 TNFESDGAXLTDSG------IIHQPGENRERWXYQAAHYELVASAAAVQL---GHQINPD 238
Query: 192 GLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHLVGNR---L 248
IG ++ P A A RA +F + + G+YP+ +++ + L
Sbjct: 239 FQIGCXIAXCPIYPLTAAPADVLFAQRAXQTRF-YFADVHCNGTYPQWLRNRFESEHFNL 297
Query: 249 PKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNGFPLGQ 308
+ + G+VD++G +YY + ++ ++ +E +
Sbjct: 298 DITAEDLKILQAGTVDYIGFSYYXSFTVKDT-------------GKLAYNEEHDLVKNPY 344
Query: 309 PTGSDW-LSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTVRVNY 367
SDW + P G+R ENG+G ++ + ++D R++Y
Sbjct: 345 VKASDWGWQVDPVGLR-YAXNWFTDRYHLPLFIVENGLGAIDKKT--ADNQIHDDYRIDY 401
Query: 368 YNDHLSYILEAI 379
DHL I A+
Sbjct: 402 LTDHLRQIKLAV 413
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 142/266 (53%), Gaps = 18/266 (6%)
Query: 14 ADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISN 73
A +FY YKED+ L ++GF R SI+W+RI P G+ N+ G+ FY++L +E +
Sbjct: 65 AIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGD-EAEPNEAGLQFYDDLFDECLKY 123
Query: 74 GLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV 133
G+ P VTL H++ P L EYGGF + K++ F +A++CF+ + D+VK+W+T NE
Sbjct: 124 GIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINN- 182
Query: 134 GECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGL 193
+ Y + AP S + A Y AAH+ +++ A AVK+ + + N
Sbjct: 183 -QANYQEDF-APFTNSGIVYKEGDDREAI-MYQAAHYELVASARAVKI---GHAINPNLN 236
Query: 194 IGITVSSIWAVPKFPTVASEK---AAYRAIDFKFGWIFNPITYGSYPRSMQHLVGNRLPK 250
IG V+ P +P + K A +A+ ++ + + +G YP + + K
Sbjct: 237 IGCMVA---MCPIYPATCNPKDILMAQKAMQKRY-YFADVHVHGFYPEHIFKYWERKAIK 292
Query: 251 --FT-KSQAEMVKGSVDFLGLNYYTA 273
FT + + ++ +G+VD++G +YY +
Sbjct: 293 VDFTERDKKDLFEGTVDYIGFSYYMS 318
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 142/266 (53%), Gaps = 18/266 (6%)
Query: 14 ADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISN 73
A +FY YKED+ L ++GF R SI+W+RI P G+ N+ G+ FY++L +E +
Sbjct: 65 AIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGD-EAEPNEAGLQFYDDLFDECLKY 123
Query: 74 GLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV 133
G+ P VTL H++ P L EYGGF + K++ F +A++CF+ + D+VK+W+T NE
Sbjct: 124 GIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINN- 182
Query: 134 GECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGL 193
+ Y + AP S + A Y AAH+ +++ A AVK+ + + N
Sbjct: 183 -QANYQEDF-APFTNSGIVYKEGDDREAI-MYQAAHYELVASARAVKI---GHAINPNLN 236
Query: 194 IGITVSSIWAVPKFPTVASEK---AAYRAIDFKFGWIFNPITYGSYPRSMQHLVGNRLPK 250
IG V+ P +P + K A +A+ ++ + + +G YP + + K
Sbjct: 237 IGCMVA---MCPIYPATCNPKDILMAQKAMQKRY-YFADVHVHGFYPEHIFKYWERKAIK 292
Query: 251 --FT-KSQAEMVKGSVDFLGLNYYTA 273
FT + + ++ +G+VD++G +YY +
Sbjct: 293 VDFTERDKKDLFEGTVDYIGFSYYMS 318
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 165/396 (41%), Gaps = 56/396 (14%)
Query: 7 DHSNGDVADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNL 66
D+ D A + Y + + D+ L+ +G +S R SI W+R++ +N G+ +YN +
Sbjct: 43 DYVGPDTASDAYHQIESDLTLLASLGHNSYRTSIQWTRLIDDFE-QATINPDGLAYYNRV 101
Query: 67 INELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWIT 126
I+ ++NG+ P + L H+D P AL YGG+ S +V F ++ +CF++FGDRVK W
Sbjct: 102 IDACLANGIRPVINLHHFDLPIALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFV 161
Query: 127 LNEPETVGECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNY 186
NEP V E Y P G A + A++L L+ A ++ YR+
Sbjct: 162 HNEPMVVVEGSYLMQFHYPAIVD--------GKKAVQ---VAYNLALATAKVIQAYRRGP 210
Query: 187 QASQNGLIGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHLV-- 244
+G IG ++ A P + A AA+ A + +G +P + ++
Sbjct: 211 AELSDGRIGTILNLTPAYPASQSEADMAAAHFAELWNNDLFMEAAVHGKFPEELVAVLKK 270
Query: 245 -GNRLPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNG 303
G + A + + VD+LGLN+Y R K +
Sbjct: 271 DGVLWQSTPEELALIAENRVDYLGLNFYHP----------------------KRVKAPDA 308
Query: 304 FPLGQPTGS-DW-----------------LSIYPKGIREXXXXXXXXXXXXXXXXTENGV 345
P+ P+ S +W IYP+ + + +ENGV
Sbjct: 309 IPVISPSWSPEWYYDPYLMPGRRMNVDKGWEIYPEAVYDIAIKMRDHYDNIPWFLSENGV 368
Query: 346 GDVNSSSWPISYA-LNDTVRVNYYNDHLSYILEAIK 380
G + + D R+ + +HL+Y+ + I+
Sbjct: 369 GISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKGIE 404
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 18/266 (6%)
Query: 14 ADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISN 73
A +FY YKED+ L + GF R SI+W+RI P G+ N+ G+ FY++L +E +
Sbjct: 65 AIDFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGD-EAEPNEAGLQFYDDLFDECLKY 123
Query: 74 GLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV 133
G+ P VTL H++ P L EYGGF + K++ F +A++CF+ + D+VK+W T NE
Sbjct: 124 GIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINN- 182
Query: 134 GECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGL 193
+ Y + AP S + A Y AAH+ +++ A AVK+ + + N
Sbjct: 183 -QANYQEDF-APFTNSGIVYKEGDDREAIX-YQAAHYELVASARAVKI---GHAINPNLN 236
Query: 194 IGITVSSIWAVPKFPTVASEK---AAYRAIDFKFGWIFNPITYGSYPRSMQHLVGNRLPK 250
IG V+ P +P + K A +A ++ + + +G YP + + K
Sbjct: 237 IGCXVAX---CPIYPATCNPKDILXAQKAXQKRY-YFADVHVHGFYPEHIFKYWERKAIK 292
Query: 251 --FT-KSQAEMVKGSVDFLGLNYYTA 273
FT + + ++ +G+VD++G +YY +
Sbjct: 293 VDFTERDKKDLFEGTVDYIGFSYYXS 318
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 20/268 (7%)
Query: 14 ADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISN 73
A +FY YKEDI L ++GF R SI+W+RI P G+ N++G+ FY+++ +EL+
Sbjct: 66 AVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGD-EAQPNEEGLKFYDDMFDELLKY 124
Query: 74 GLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV 133
+ P +TL H++ P L +YG + + K+V F +A++ F+ + +VK+W+T NE
Sbjct: 125 NIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINN- 183
Query: 134 GECGYAKGTKAP--GRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQN 191
+ +AP G C + + N Y HH ++ A AVK R+ +
Sbjct: 184 -----QRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKV 238
Query: 192 GLIGITVSSIWAVPKFP-TVASEKAAYRAIDFKFGWIFNPIT----YGSYPRSMQHLVGN 246
G + + VP +P + + + + ++F + Y SY + G
Sbjct: 239 GCM------LAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGF 292
Query: 247 RLPKFTKSQAEMVKGSVDFLGLNYYTAD 274
+ + +G+ D+LG +YY +
Sbjct: 293 NIKMEDGDLDVLREGTCDYLGFSYYMTN 320
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 153/368 (41%), Gaps = 62/368 (16%)
Query: 14 ADNFYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISN 73
A N + Y++DI L+ +G+++ RFSI WSR+ P N N+ Y +I+ L++
Sbjct: 45 ACNHWELYRDDIQLMTSLGYNAYRFSIEWSRLFPEEN---KFNEDAFMKYREIIDLLLTR 101
Query: 74 GLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV 133
G+TP VTL H+ +P + GGFL + +K + Y + E ++VK T NEP
Sbjct: 102 GITPLVTLHHFTSPLWFMKK-GGFLREENLKHWEKYIEKV-AELLEKVKLVATFNEPMVY 159
Query: 134 GECGYAKGTKAPGRCSNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGL 193
GY P +I S + + A +L+ +HA A +L ++
Sbjct: 160 VMMGYLTAYWPP-----FI------RSPFKAFKVAANLLKAHAIAYELLHGKFK------ 202
Query: 194 IGITVSSIWAVPKFPTVASEKAAYRAIDFKFGWIF-NPITYGSYPRSMQHLVGNRLPKFT 252
+GI + +P KAA +A D F W F + I G Y + R+P
Sbjct: 203 VGIVKNIPIILPASDKERDRKAAEKA-DNLFNWHFLDAIWSGKYRGVFK---TYRIP--- 255
Query: 253 KSQAEMVKGSVDFLGLNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNGFPLGQPTGS 312
+ DF+G+NYYTA EV + ++ K T
Sbjct: 256 -------QSDADFIGVNYYTAS---EVRHTWNPLKFFFEVKLADISERK--------TQM 297
Query: 313 DWLSIYPKGIREXXXXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTVRVNYYNDHL 372
W S+YPKGI TENG+ L+D RV + HL
Sbjct: 298 GW-SVYPKGI--YMALKKASRYGRPLYITENGIA-----------TLDDEWRVEFIIQHL 343
Query: 373 SYILEAIK 380
Y+ +AI+
Sbjct: 344 QYVHKAIE 351
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 139/414 (33%), Gaps = 104/414 (25%)
Query: 10 NGDVADN---FYFRYKEDIALVKQVGFDSIRFSISWSRILP--------------HGNI- 51
+GD+ +N ++ YK+D + +++G D IR I W+RI P GNI
Sbjct: 48 SGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNII 107
Query: 52 ------------SGGVNQQGVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEY----- 94
N + ++ Y + ++ G T + L+HW P + D
Sbjct: 108 SVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKL 167
Query: 95 ------GGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETVGECGYAKGTKAPGRC 148
G+L K V +F +A D V W T+NEP V GY
Sbjct: 168 GPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYI--------- 218
Query: 149 SNYIGNCPAGNSATEPYVAAH-HLILSHATAVKLYRQNYQASQNGLIGITVSSIWAVPKF 207
N P G + E A +LI +H A ++ + S +G+ + W P
Sbjct: 219 -NLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKS----VGVIYAFAWHDPLA 273
Query: 208 PTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHLVGNRLPKFTKSQAEMVKGSVDFLG 267
E R D++F I + KG +D++G
Sbjct: 274 EEYKDEVEEIRKKDYEFVTILHS-----------------------------KGKLDWIG 304
Query: 268 LNYYTADYAEEVXXXXXXXXXXXXXXRVNRTKEKNGFPL-GQPTGSDWLSIYPKGIREXX 326
+NYY+ E+ GF G+P +YP+G+ E
Sbjct: 305 VNYYSR------LVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGL-ENL 357
Query: 327 XXXXXXXXXXXXXXTENGVGDVNSSSWPISYALNDTVRVNYYNDHLSYILEAIK 380
TENG+ D D R +Y HL + A+K
Sbjct: 358 LKYLNNAYELPMIITENGMADA-----------ADRYRPHYLVSHLKAVYNAMK 400
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 118/305 (38%), Gaps = 75/305 (24%)
Query: 10 NGDVADN---FYFRYKEDIALVKQVGFDSIRFSISWSRILPHGN---------------- 50
+GD +N ++ Y++ + +G + R + WSRI P
Sbjct: 49 SGDFPENGPGYWGNYRKFHDAAQAMGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLS 108
Query: 51 --ISGG--------VNQQGVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEYG----- 95
+S G N+ ++ Y + ++L S G+T + L+HW P L D
Sbjct: 109 VYVSEGALEQLDKMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGN 168
Query: 96 -----GFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETVGECGYA--KGTKAPGRC 148
G+L + V +F ++ + D V + T+NEP V GYA K PG
Sbjct: 169 LSAPSGWLDVRTVIEFAKFSAYVAWKLDDLVYMYSTMNEPNVVWGLGYAAVKSGFPPG-- 226
Query: 149 SNYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGLIGITVSSIWAVPKF- 207
Y+ AG A +L+ +HA A Y A + + V I+A F
Sbjct: 227 --YLCLECAGR-------AMKNLVQAHARA-------YDAVK-AITKKPVGVIYANSDFT 269
Query: 208 PTVASEKAAYRAIDFKFGWIFNPITYGSYPRSMQHLVGNRLPKFTKSQAEMVKGSVDFLG 267
P +++ A F W F +V +L T+ +KG +D++G
Sbjct: 270 PLTDADREAAERAKFDNRWAF-----------FDAVVRGQLGGSTRDD---LKGRLDWIG 315
Query: 268 LNYYT 272
+NYYT
Sbjct: 316 VNYYT 320
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 78/203 (38%), Gaps = 48/203 (23%)
Query: 10 NGDVADN---FYFRYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGV----------- 55
+GD +N ++ + D L +++G ++IR + WSRI P + V
Sbjct: 48 SGDFPENGPGYWNLNQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIV 107
Query: 56 ----------------NQQGVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEY----- 94
N++ V+ Y + + + G + L+HW P L +
Sbjct: 108 HVDVDDKAVERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRM 167
Query: 95 ------GGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETVGECGY--AKGTKAPG 146
G+L+ + V +F YA + G+ W T+NEP V E GY KG PG
Sbjct: 168 GPDRAPSGWLNEESVVEFAKYAAYIAWKMGELPVMWSTMNEPNVVYEQGYMFVKGGFPPG 227
Query: 147 RCSNYIGNCPAGNSATEPYVAAH 169
S A + A + AH
Sbjct: 228 YLS-----LEAADKARRNMIQAH 245
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 116/305 (38%), Gaps = 72/305 (23%)
Query: 10 NGDVADN---FYFRYKEDIALVKQVGFDSIRFSISWSRILPH------------------ 48
+GD+ +N ++ YK +++G R ++ WSRI P+
Sbjct: 49 SGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEV 108
Query: 49 -------GNISGGVNQQGVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEY------- 94
+ N+ ++ Y + +L S GL + ++HW P L D
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDF 168
Query: 95 ---GGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV--GECGYAKGTKAPGRCS 149
G+LS + V +F ++ +F D V + T+NEP V K PG S
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS 228
Query: 150 NYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGLIGITVSSIWAVPKFPT 209
+ A +++I +HA A ++ +GI I+A F
Sbjct: 229 FELSRR-----------AMYNIIQAHARAY----DGIKSVSKKPVGI----IYANSSFQP 269
Query: 210 VASE--KAAYRAIDFKFGWIFNPITYGSYPRSMQHLVGNRLPKFTKSQAEMVKGSVDFLG 267
+ + +A A + W F+ I G R + +V + L KG +D++G
Sbjct: 270 LTDKDMEAVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIG 318
Query: 268 LNYYT 272
+NYYT
Sbjct: 319 VNYYT 323
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 116/305 (38%), Gaps = 72/305 (23%)
Query: 10 NGDVADN---FYFRYKEDIALVKQVGFDSIRFSISWSRILPH------------------ 48
+GD+ +N ++ YK +++G R ++ WSRI P+
Sbjct: 49 SGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEV 108
Query: 49 -------GNISGGVNQQGVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEY------- 94
+ N+ ++ Y + +L S GL + ++HW P L D
Sbjct: 109 EINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDF 168
Query: 95 ---GGFLSPKIVKDFGDYADLCFKEFGDRVKHWITLNEPETV--GECGYAKGTKAPGRCS 149
G+LS + V +F ++ +F D V + T+NEP V K PG S
Sbjct: 169 TGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS 228
Query: 150 NYIGNCPAGNSATEPYVAAHHLILSHATAVKLYRQNYQASQNGLIGITVSSIWAVPKFPT 209
+ A +++I +HA A ++ +GI I+A F
Sbjct: 229 FELSRR-----------AMYNIIQAHARAY----DGIKSVSKKPVGI----IYANSSFQP 269
Query: 210 VASE--KAAYRAIDFKFGWIFNPITYGSYPRSMQHLVGNRLPKFTKSQAEMVKGSVDFLG 267
+ + +A A + W F+ I G R + +V + L KG +D++G
Sbjct: 270 LTDKDMEAVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIG 318
Query: 268 LNYYT 272
+NYYT
Sbjct: 319 VNYYT 323
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 44/232 (18%)
Query: 55 VNQQGVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEY----------GGFLSPKIVK 104
N+ ++ Y + +L S GL ++HW P L D G+LS + V
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 105 DFGDYADLCFKEFGDRVKHWITLNEPETV--GECGYAKGTKAPGRCSNYIGNCPAGNSAT 162
+F ++ +F D V + T+NEP V K PG S +
Sbjct: 182 EFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRR------- 234
Query: 163 EPYVAAHHLILSHATAVKLYRQNYQASQNGLIGITVSSIWAVPKFPTVASE--KAAYRAI 220
A +++I +HA A ++ +GI I+A F + + +A A
Sbjct: 235 ----AMYNIIQAHARAY----DGIKSVSKKPVGI----IYANSSFQPLTDKDMEAVEMAE 282
Query: 221 DFKFGWIFNPITYGSYPRSMQHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYT 272
+ W F+ I G R + +V + L KG +D++G+NYYT
Sbjct: 283 NDNRWWFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIGVNYYT 323
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 44/232 (18%)
Query: 55 VNQQGVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEY----------GGFLSPKIVK 104
N+ ++ Y + +L S GL ++HW P L D G+LS + V
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 105 DFGDYADLCFKEFGDRVKHWITLNEPETV--GECGYAKGTKAPGRCSNYIGNCPAGNSAT 162
+F ++ +F D V + T+NEP V K PG S +
Sbjct: 182 EFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRR------- 234
Query: 163 EPYVAAHHLILSHATAVKLYRQNYQASQNGLIGITVSSIWAVPKFPTVASE--KAAYRAI 220
A +++I +HA A ++ +GI I+A F + + +A A
Sbjct: 235 ----AMYNIIQAHARAY----DGIKSVSKKPVGI----IYANSSFQPLTDKDMEAVEMAE 282
Query: 221 DFKFGWIFNPITYGSYPRSMQHLVGNRLPKFTKSQAEMVKGSVDFLGLNYYT 272
+ W F+ I G R + +V + L KG +D++G+NYYT
Sbjct: 283 NDNRWWFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIGVNYYT 323
>pdb|3RJX|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase
Length = 320
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 23 EDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISNGLTPFVTLF 82
E ++K+ GFDS+R I WS + +++ +D ++++ + N L +
Sbjct: 45 EYFKIIKERGFDSVRIPIRWSAHISE-KYPYEIDKFFLDRVKHVVDVALKNDLVVIINCH 103
Query: 83 HWDTPQALEDEYGGFLS---PKIVKDFGDYADLCFKE 116
H++ D+YG L ++ + F DY D F E
Sbjct: 104 HFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFE 140
>pdb|3RJY|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase In Complex With Substrate
Length = 320
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 23 EDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISNGLTPFVTLF 82
E ++K+ GFDS+R I WS + +++ +D ++++ + N L +
Sbjct: 45 EYFKIIKERGFDSVRIPIRWSAHISE-KYPYEIDKFFLDRVKHVVDVALKNDLVVIINCH 103
Query: 83 HWDTPQALEDEYGGFLS---PKIVKDFGDYADLCFKE 116
H++ D+YG L ++ + F DY D F E
Sbjct: 104 HFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFE 140
>pdb|3NCO|A Chain A, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
pdb|3NCO|B Chain B, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
Length = 320
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 23 EDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISNGLTPFVTLF 82
E ++K+ GFDS+R I WS + +++ +D ++++ + N L +
Sbjct: 45 EYFKIIKERGFDSVRIPIRWSAHISE-KYPYEIDKFFLDRVKHVVDVALKNDLVVIINCH 103
Query: 83 HWDTPQALEDEYGGFLS---PKIVKDFGDYADLCFKE 116
H++ D+YG L ++ + F DY D F E
Sbjct: 104 HFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFE 140
>pdb|3EDV|A Chain A, Crystal Structure Of Repeats 14-16 Of Beta2-Spectrin
pdb|3EDV|B Chain B, Crystal Structure Of Repeats 14-16 Of Beta2-Spectrin
Length = 323
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 22 KEDIALVKQVGFDSIRFSISWSRILPHGNISGGVNQQGVDFYNNLINELISNGLTPFVTL 81
+E +A ++G D ++ R +G + Q+ VD N+L +ELI++G + T+
Sbjct: 25 REVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATI 84
Query: 82 FHW 84
W
Sbjct: 85 AEW 87
>pdb|4G4S|P Chain P, Structure Of Proteasome-Pba1-Pba2 Complex
Length = 269
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
Query: 59 GVDFYNNLINELISNGLTPFVTLFH------WDTPQALEDEYGGFLSPKIVKDFGDY 109
V++ NN I E+I PF++ ++ WD+ A+EDE G + P+ V G++
Sbjct: 93 SVNYLNNFIVEII----LPFLSKYNISEICIWDSLYAMEDENGVIVRPQEVYSLGEF 145
>pdb|3TQK|A Chain A, Structure Of Phospho-2-Dehydro-3-Deoxyheptonate Aldolase
From Francisella Tularensis Schu S4
Length = 346
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 20 RYKEDIALVKQVGFDSIRFSISWSRILPHGNISGGVN-QQGVDFYNNLINELISNGLTPF 78
++ +DI ++ +V F+ R +I W + ++ N +G+ NL+++L + GL
Sbjct: 79 KFHKDILIIXRVYFEKPRTTIGWKGFINDPDLDNSYNINKGLRLARNLLSDLTNXGLPCA 138
Query: 79 VTLFHWDTPQ 88
TPQ
Sbjct: 139 TEFLDVITPQ 148
>pdb|2AJR|A Chain A, Crystal Structure Of Possible 1-Phosphofructokinase (Ec
2.7.1.56) (Tm0828) From Thermotoga Maritima At 2.46 A
Resolution
pdb|2AJR|B Chain B, Crystal Structure Of Possible 1-Phosphofructokinase (Ec
2.7.1.56) (Tm0828) From Thermotoga Maritima At 2.46 A
Resolution
Length = 331
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 15/110 (13%)
Query: 37 RFSISWSRI---LPHGNISGGVNQQGVDFYNNLINELISNGLTPFVTLFHWDTPQALEDE 93
R+ + S++ + G+I GVN+ + NEL+ V +F TP+ LE
Sbjct: 139 RYKXTLSKVDCVVISGSIPPGVNE-------GICNELVRLARERGVFVFVEQTPRLLERI 191
Query: 94 YGGFLSPKIVK-----DFGDYADLCFKEFGDRVKHWITLNEPETVGECGY 138
Y G P +VK + + + K F D VK L E V Y
Sbjct: 192 YEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKSQVSVVSY 241
>pdb|2Z8D|A Chain A, The Galacto-N-Biose-LACTO-N-Biose I-Binding Protein
(Gl-Bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Lacto-N- Biose
pdb|2Z8D|B Chain B, The Galacto-N-Biose-LACTO-N-Biose I-Binding Protein
(Gl-Bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Lacto-N- Biose
pdb|2Z8E|A Chain A, The Galacto-n-biose-/lacto-n-biose I-binding Protein
(gl-bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Galacto- N-biose
pdb|2Z8E|B Chain B, The Galacto-n-biose-/lacto-n-biose I-binding Protein
(gl-bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Galacto- N-biose
pdb|2Z8F|A Chain A, The Galacto-N-Biose-LACTO-N-Biose I-Binding Protein
(Gl-Bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Lacto-N- Tetraose
pdb|2Z8F|B Chain B, The Galacto-N-Biose-LACTO-N-Biose I-Binding Protein
(Gl-Bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Lacto-N- Tetraose
Length = 412
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 60 VDFYNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSPKIVKDF 106
+D++N + +L+S GL P T +TP +GG I+K+F
Sbjct: 308 LDWFNTQVPDLVSQGLVPAATTEDAETPSEWSTFFGG---QDIMKEF 351
>pdb|1EDG|A Chain A, Single Crystal Structure Determination Of The Catalytic
Domain Of Celcca Carried Out At 15 Degree C
Length = 380
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 22 KEDIALVKQVGFDSIRFSISWSRILPHGNISGG---VNQQGVDFYNNLINELISNGLTPF 78
K+ I +KQ GF+++R +SW H ++SG ++ ++ ++N I N + +
Sbjct: 64 KQMIDAIKQKGFNTVRIPVSW-----HPHVSGSDYKISDVWMNRVQEVVNYCIDNKM--Y 116
Query: 79 VTLFHWDTPQALEDEYGGFLSPKIVKDFGDYADLCFKEFGDRV----KHWI--TLNEPET 132
V L +T ++ G F S + + Y + + R +H I +NEP
Sbjct: 117 VIL---NTHHDVDKVKGYFPSSQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRL 173
Query: 133 VGE 135
VG
Sbjct: 174 VGH 176
>pdb|1HTT|A Chain A, Histidyl-Trna Synthetase
pdb|1HTT|B Chain B, Histidyl-Trna Synthetase
pdb|1HTT|C Chain C, Histidyl-Trna Synthetase
pdb|1HTT|D Chain D, Histidyl-Trna Synthetase
Length = 423
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 44 RILPHGNISGGVNQQ---GVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSP 100
++L I+ VNQ+ G+D+YN + E ++N L T+ L ++ GG +P
Sbjct: 241 KLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATP 300
Query: 101 KI 102
+
Sbjct: 301 AV 302
>pdb|1KMM|A Chain A, Histidyl-Trna Synthetase Complexed With Histidyl-Adenylate
pdb|1KMM|B Chain B, Histidyl-Trna Synthetase Complexed With Histidyl-Adenylate
pdb|1KMM|C Chain C, Histidyl-Trna Synthetase Complexed With Histidyl-Adenylate
pdb|1KMM|D Chain D, Histidyl-Trna Synthetase Complexed With Histidyl-Adenylate
pdb|1KMN|A Chain A, Histidyl-Trna Synthetase Complexed With Histidinol And Atp
pdb|1KMN|B Chain B, Histidyl-Trna Synthetase Complexed With Histidinol And Atp
pdb|1KMN|C Chain C, Histidyl-Trna Synthetase Complexed With Histidinol And Atp
pdb|1KMN|D Chain D, Histidyl-Trna Synthetase Complexed With Histidinol And Atp
Length = 424
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 44 RILPHGNISGGVNQQ---GVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSP 100
++L I+ VNQ+ G+D+YN + E ++N L T+ L ++ GG +P
Sbjct: 242 KLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATP 301
Query: 101 KI 102
+
Sbjct: 302 AV 303
>pdb|2EL9|A Chain A, Crystal Structure Of E.Coli Histidyl-Trna Synthetase
Complexed With A Histidyl-Adenylate Analogue
pdb|2EL9|B Chain B, Crystal Structure Of E.Coli Histidyl-Trna Synthetase
Complexed With A Histidyl-Adenylate Analogue
pdb|2EL9|C Chain C, Crystal Structure Of E.Coli Histidyl-Trna Synthetase
Complexed With A Histidyl-Adenylate Analogue
pdb|2EL9|D Chain D, Crystal Structure Of E.Coli Histidyl-Trna Synthetase
Complexed With A Histidyl-Adenylate Analogue
Length = 431
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 44 RILPHGNISGGVNQQ---GVDFYNNLINELISNGLTPFVTLFHWDTPQALEDEYGGFLSP 100
++L I+ VNQ+ G+D+YN + E ++N L T+ L ++ GG +P
Sbjct: 249 KLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATP 308
Query: 101 KI 102
+
Sbjct: 309 AV 310
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,937,458
Number of Sequences: 62578
Number of extensions: 497172
Number of successful extensions: 1181
Number of sequences better than 100.0: 88
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 828
Number of HSP's gapped (non-prelim): 103
length of query: 380
length of database: 14,973,337
effective HSP length: 101
effective length of query: 279
effective length of database: 8,652,959
effective search space: 2414175561
effective search space used: 2414175561
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)