Query 016925
Match_columns 380
No_of_seqs 131 out of 2027
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:04:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016925.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016925hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3c48_A Predicted glycosyltrans 99.9 2.8E-25 9.6E-30 219.0 27.0 298 31-370 17-341 (438)
2 3fro_A GLGA glycogen synthase; 99.9 3.8E-25 1.3E-29 217.2 26.7 310 33-371 1-347 (439)
3 2r60_A Glycosyl transferase, g 99.9 3.1E-25 1.1E-29 223.0 23.8 309 33-369 6-373 (499)
4 3okp_A GDP-mannose-dependent a 99.9 2.4E-24 8.4E-29 208.6 24.7 272 33-371 3-296 (394)
5 2gek_A Phosphatidylinositol ma 99.9 1.6E-23 5.3E-28 204.0 23.6 278 30-372 16-301 (406)
6 2jjm_A Glycosyl transferase, g 99.9 4.9E-23 1.7E-27 200.5 22.2 265 46-372 25-302 (394)
7 2x6q_A Trehalose-synthase TRET 99.9 4.3E-23 1.5E-27 202.3 21.8 280 29-371 35-332 (416)
8 3oy2_A Glycosyltransferase B73 99.9 4.3E-23 1.5E-27 202.0 21.7 272 35-372 1-291 (413)
9 2iw1_A Lipopolysaccharide core 99.9 1.1E-23 3.8E-28 202.8 15.9 267 35-370 1-286 (374)
10 3s28_A Sucrose synthase 1; gly 99.9 1.3E-23 4.4E-28 221.2 17.0 316 29-371 273-681 (816)
11 2iuy_A Avigt4, glycosyltransfe 99.9 1.4E-22 4.9E-27 193.4 20.5 233 33-371 2-258 (342)
12 1rzu_A Glycogen synthase 1; gl 99.9 1.8E-22 6.2E-27 201.9 19.9 142 215-369 200-380 (485)
13 2qzs_A Glycogen synthase; glyc 99.9 1.4E-21 4.9E-26 195.4 24.0 308 35-370 1-382 (485)
14 3vue_A GBSS-I, granule-bound s 99.9 2.2E-19 7.6E-24 182.3 28.6 142 216-369 236-416 (536)
15 2x0d_A WSAF; GT4 family, trans 99.8 1.1E-19 3.7E-24 178.9 14.9 268 30-369 42-329 (413)
16 2hy7_A Glucuronosyltransferase 99.8 7.6E-19 2.6E-23 172.5 14.4 175 140-370 124-300 (406)
17 2vsy_A XCC0866; transferase, g 99.8 1.8E-17 6E-22 169.0 19.9 253 31-369 202-467 (568)
18 1f0k_A MURG, UDP-N-acetylgluco 99.7 9.5E-17 3.2E-21 154.0 17.6 250 34-364 6-263 (364)
19 3beo_A UDP-N-acetylglucosamine 99.7 3.3E-15 1.1E-19 143.7 19.4 132 220-363 149-290 (375)
20 1vgv_A UDP-N-acetylglucosamine 99.6 2.7E-14 9.2E-19 137.8 17.8 133 219-363 139-290 (384)
21 2xci_A KDO-transferase, 3-deox 99.6 5.9E-13 2E-17 129.0 23.2 134 216-368 148-292 (374)
22 1v4v_A UDP-N-acetylglucosamine 99.5 7.8E-13 2.7E-17 127.3 21.4 132 219-363 144-282 (376)
23 1uqt_A Alpha, alpha-trehalose- 99.5 1.4E-13 4.7E-18 137.7 13.7 132 244-375 219-372 (482)
24 3t5t_A Putative glycosyltransf 99.4 3.3E-12 1.1E-16 127.2 17.1 155 220-376 206-393 (496)
25 2bfw_A GLGA glycogen synthase; 99.3 9.1E-12 3.1E-16 109.0 13.1 113 249-372 2-133 (200)
26 3qhp_A Type 1 capsular polysac 99.3 3.3E-12 1.1E-16 108.5 7.6 89 269-371 2-91 (166)
27 2f9f_A First mannosyl transfer 99.3 6.2E-12 2.1E-16 108.5 8.9 91 267-371 21-114 (177)
28 3nb0_A Glycogen [starch] synth 99.3 2.2E-11 7.4E-16 124.1 13.7 100 213-313 252-380 (725)
29 3dzc_A UDP-N-acetylglucosamine 99.2 1.5E-09 5.1E-14 105.9 20.1 272 30-363 21-315 (396)
30 3otg_A CALG1; calicheamicin, T 99.1 5.5E-09 1.9E-13 101.4 21.8 267 31-363 17-316 (412)
31 3s2u_A UDP-N-acetylglucosamine 99.1 1.7E-08 5.9E-13 97.1 23.8 250 35-362 3-259 (365)
32 3rhz_A GTF3, nucleotide sugar 99.0 2.5E-09 8.4E-14 102.1 14.9 123 214-372 126-250 (339)
33 3ot5_A UDP-N-acetylglucosamine 99.0 6.5E-09 2.2E-13 101.6 17.6 270 34-363 27-309 (403)
34 2iyf_A OLED, oleandomycin glyc 98.7 1.3E-06 4.4E-11 85.3 21.2 119 221-362 185-306 (430)
35 4fzr_A SSFS6; structural genom 98.6 4.3E-07 1.5E-11 87.8 12.7 70 269-362 228-307 (398)
36 3tsa_A SPNG, NDP-rhamnosyltran 98.6 5.4E-07 1.9E-11 86.7 12.9 73 269-361 219-292 (391)
37 3oti_A CALG3; calicheamicin, T 98.5 8.8E-07 3E-11 85.7 13.8 72 269-361 233-305 (398)
38 3ia7_A CALG4; glycosysltransfe 98.4 1E-05 3.6E-10 77.6 18.0 37 34-75 4-40 (402)
39 3rsc_A CALG2; TDP, enediyne, s 98.4 2.4E-05 8.3E-10 75.7 19.1 40 32-76 18-57 (415)
40 2p6p_A Glycosyl transferase; X 98.3 4.7E-05 1.6E-09 72.9 19.6 69 269-362 211-286 (384)
41 4hwg_A UDP-N-acetylglucosamine 98.1 3E-05 1E-09 75.0 13.7 127 220-363 145-290 (385)
42 3q3e_A HMW1C-like glycosyltran 97.9 0.00079 2.7E-08 68.3 19.4 88 271-367 441-530 (631)
43 2yjn_A ERYCIII, glycosyltransf 97.8 0.0017 5.9E-08 63.3 20.1 69 270-362 269-342 (441)
44 4amg_A Snogd; transferase, pol 97.8 0.00034 1.2E-08 67.0 14.0 72 269-361 238-310 (400)
45 2iya_A OLEI, oleandomycin glyc 97.5 0.019 6.4E-07 55.4 22.6 72 269-362 256-328 (424)
46 3h4t_A Glycosyltransferase GTF 97.2 0.093 3.2E-06 50.3 23.5 70 269-363 222-292 (404)
47 1iir_A Glycosyltransferase GTF 96.5 0.59 2E-05 44.6 23.6 68 269-362 239-308 (415)
48 2c4m_A Glycogen phosphorylase; 95.8 0.049 1.7E-06 56.6 11.2 151 216-368 397-630 (796)
49 1l5w_A Maltodextrin phosphoryl 95.8 0.059 2E-06 56.0 11.5 147 216-364 408-633 (796)
50 2o6l_A UDP-glucuronosyltransfe 95.7 0.012 4.2E-07 49.1 5.3 68 269-361 22-92 (170)
51 2gj4_A Glycogen phosphorylase, 94.9 0.088 3E-06 54.9 9.4 145 217-364 433-657 (824)
52 3tov_A Glycosyl transferase fa 92.2 7.4 0.00025 36.2 22.3 81 269-362 185-268 (349)
53 4gyw_A UDP-N-acetylglucosamine 89.9 1.1 3.8E-05 46.4 9.6 83 270-361 522-605 (723)
54 3hbm_A UDP-sugar hydrolase; PS 84.6 1.3 4.4E-05 40.4 5.7 76 270-364 159-234 (282)
55 1psw_A ADP-heptose LPS heptosy 81.6 3.4 0.00012 38.0 7.5 80 271-362 183-268 (348)
56 1rrv_A Glycosyltransferase GTF 75.5 19 0.00063 33.9 10.8 68 269-362 238-309 (416)
57 1rrv_A Glycosyltransferase GTF 72.9 5.3 0.00018 37.8 6.2 37 35-76 1-37 (416)
58 3gd5_A Otcase, ornithine carba 71.9 39 0.0013 31.1 11.5 124 217-364 99-235 (323)
59 2w37_A Ornithine carbamoyltran 67.4 54 0.0018 30.7 11.5 121 220-363 121-254 (359)
60 3lkv_A Uncharacterized conserv 65.0 76 0.0026 28.3 14.0 134 215-365 63-203 (302)
61 4ep1_A Otcase, ornithine carba 63.9 54 0.0018 30.4 10.7 121 220-364 124-257 (340)
62 1duv_G Octase-1, ornithine tra 63.6 90 0.0031 28.8 12.2 124 217-363 95-233 (333)
63 2gt1_A Lipopolysaccharide hept 63.1 27 0.00093 31.5 8.7 80 271-362 181-260 (326)
64 1vlv_A Otcase, ornithine carba 62.8 82 0.0028 29.0 11.7 124 217-363 109-245 (325)
65 2l8s_A Integrin alpha-1; trans 59.9 4.1 0.00014 27.0 1.7 23 2-24 3-25 (54)
66 1dxh_A Ornithine carbamoyltran 57.9 72 0.0025 29.5 10.4 121 220-363 99-233 (335)
67 1pvv_A Otcase, ornithine carba 57.2 86 0.003 28.6 10.8 123 217-363 97-232 (315)
68 2i6u_A Otcase, ornithine carba 56.7 1.2E+02 0.004 27.7 11.8 121 220-363 93-226 (307)
69 1oth_A Protein (ornithine tran 54.7 1.3E+02 0.0044 27.6 12.0 120 220-363 100-232 (321)
70 4ekn_B Aspartate carbamoyltran 52.9 44 0.0015 30.5 8.0 130 220-373 95-241 (306)
71 3lzd_A DPH2; diphthamide biosy 45.5 23 0.0008 33.4 5.0 56 304-361 265-320 (378)
72 2knc_A Integrin alpha-IIB; tra 44.2 13 0.00045 24.6 2.2 22 3-24 7-28 (54)
73 1h8b_A ACT-EF34, alpha-actinin 42.9 49 0.0017 23.1 5.3 63 282-378 7-73 (75)
74 1e2b_A Enzyme IIB-cellobiose; 42.5 35 0.0012 25.7 4.8 61 307-372 7-69 (106)
75 1ygp_A Yeast glycogen phosphor 42.4 95 0.0032 32.5 9.2 91 269-361 600-713 (879)
76 2k1a_A Integrin alpha-IIB; sin 41.7 16 0.00056 22.8 2.2 22 3-24 5-26 (42)
77 3en0_A Cyanophycinase; serine 39.4 1.5E+02 0.0052 26.6 9.4 92 269-367 26-122 (291)
78 4a8p_A Putrescine carbamoyltra 38.5 2.1E+02 0.0071 26.6 10.3 120 217-361 92-226 (355)
79 2lx0_A Membrane fusion protein 38.5 21 0.00073 19.8 2.1 17 8-24 5-21 (32)
80 3u7q_A Nitrogenase molybdenum- 38.4 91 0.0031 30.4 8.2 92 281-377 192-288 (492)
81 4h31_A Otcase, ornithine carba 37.8 2E+02 0.0069 26.7 10.2 122 220-364 124-260 (358)
82 1psw_A ADP-heptose LPS heptosy 37.2 2.1E+02 0.0071 25.5 10.3 39 35-76 1-39 (348)
83 2kv5_A FST, putative uncharact 36.9 63 0.0022 18.9 4.1 21 15-35 13-33 (33)
84 3nbm_A PTS system, lactose-spe 36.5 30 0.001 26.3 3.5 52 320-374 21-74 (108)
85 2acv_A Triterpene UDP-glucosyl 35.7 2.8E+02 0.0096 26.3 11.3 41 34-77 9-49 (463)
86 3tpf_A Otcase, ornithine carba 35.5 2.5E+02 0.0086 25.4 11.2 120 220-363 90-223 (307)
87 3csu_A Protein (aspartate carb 35.5 90 0.0031 28.4 7.2 125 217-365 94-232 (310)
88 4a8t_A Putrescine carbamoyltra 35.2 2.2E+02 0.0076 26.2 9.9 117 220-361 117-248 (339)
89 3l7i_A Teichoic acid biosynthe 34.4 54 0.0018 33.6 6.2 133 219-371 476-631 (729)
90 3hly_A Flavodoxin-like domain; 34.3 47 0.0016 26.7 4.7 36 35-74 1-36 (161)
91 2gt1_A Lipopolysaccharide hept 31.6 1.5E+02 0.0052 26.3 8.3 39 35-76 1-39 (326)
92 3u7i_A FMN-dependent NADH-azor 31.4 73 0.0025 27.3 5.7 43 32-74 2-48 (223)
93 1zq6_A Otcase, ornithine carba 30.2 1.8E+02 0.0061 27.1 8.3 83 268-364 189-275 (359)
94 3grf_A Ornithine carbamoyltran 29.2 2.3E+02 0.008 25.9 8.9 79 268-361 160-240 (328)
95 2l2q_A PTS system, cellobiose- 28.5 1.2E+02 0.004 22.6 5.8 67 303-373 3-71 (109)
96 1e5d_A Rubredoxin\:oxygen oxid 28.2 1.3E+02 0.0044 27.7 7.3 77 282-362 234-310 (402)
97 2fep_A Catabolite control prot 28.0 63 0.0021 28.3 4.8 49 25-76 7-55 (289)
98 3fni_A Putative diflavin flavo 27.7 1E+02 0.0035 24.6 5.7 37 34-74 4-40 (159)
99 1rro_A RAT oncomodulin; calciu 27.6 36 0.0012 24.7 2.6 30 342-374 4-33 (108)
100 2kyc_A Parvalbumin-3, parvalbu 27.5 35 0.0012 24.8 2.6 31 341-374 3-33 (108)
101 1td9_A Phosphate acetyltransfe 27.5 2.9E+02 0.01 25.0 9.4 44 285-342 33-77 (329)
102 3f6r_A Flavodoxin; FMN binding 26.9 63 0.0021 25.2 4.1 36 35-74 2-37 (148)
103 1ml4_A Aspartate transcarbamoy 26.9 1.6E+02 0.0054 26.8 7.2 123 217-364 96-231 (308)
104 2hy5_A Putative sulfurtransfer 26.2 1.2E+02 0.0041 23.3 5.6 37 35-73 1-38 (130)
105 3p2o_A Bifunctional protein fo 26.1 1.1E+02 0.0037 27.6 5.8 52 302-355 33-85 (285)
106 4a26_A Putative C-1-tetrahydro 26.0 1.5E+02 0.005 26.9 6.8 53 302-356 37-90 (300)
107 2ki0_A DS119; beta-alpha-beta, 25.6 29 0.001 19.8 1.3 31 305-342 5-35 (36)
108 3aek_B Light-independent proto 25.3 3.2E+02 0.011 26.7 9.7 94 282-377 131-225 (525)
109 2ovk_B RLC, myosin regulatory 25.1 1.2E+02 0.0041 23.1 5.6 47 322-378 104-150 (153)
110 2ark_A Flavodoxin; FMN, struct 24.7 85 0.0029 25.7 4.7 39 32-74 2-41 (188)
111 2hpv_A FMN-dependent NADH-azor 24.5 1.1E+02 0.0037 25.4 5.5 40 35-74 2-43 (208)
112 4a5o_A Bifunctional protein fo 24.5 1.4E+02 0.0049 26.8 6.3 51 303-355 36-87 (286)
113 2d1p_A TUSD, hypothetical UPF0 24.3 1.4E+02 0.0049 23.5 5.8 46 24-73 4-50 (140)
114 3p0r_A Azoreductase; structura 23.7 1.2E+02 0.0041 25.5 5.6 43 32-74 2-46 (211)
115 2c2x_A Methylenetetrahydrofola 23.5 1.4E+02 0.0048 26.8 6.1 51 303-355 33-84 (281)
116 4b4u_A Bifunctional protein fo 23.5 1.6E+02 0.0056 26.6 6.5 52 302-355 53-105 (303)
117 1t5b_A Acyl carrier protein ph 23.4 98 0.0034 25.3 4.9 41 34-74 1-42 (201)
118 3ngx_A Bifunctional protein fo 22.9 68 0.0023 28.8 3.9 52 302-355 27-78 (276)
119 2q62_A ARSH; alpha/beta, flavo 22.7 82 0.0028 27.6 4.4 84 269-375 35-121 (247)
120 1a4i_A Methylenetetrahydrofola 22.7 1.7E+02 0.0057 26.6 6.5 52 303-356 36-88 (301)
121 3l4e_A Uncharacterized peptida 21.3 2.8E+02 0.0095 23.3 7.4 68 303-373 26-96 (206)
122 1wdc_B Scallop myosin; calcium 21.3 1.7E+02 0.0057 22.4 5.7 47 322-378 106-152 (156)
123 3klb_A Putative flavoprotein; 21.1 1.3E+02 0.0043 24.1 5.0 53 304-356 108-160 (162)
124 2pvb_A Protein (parvalbumin); 20.7 70 0.0024 23.0 3.1 26 345-373 7-32 (108)
125 1f4p_A Flavodoxin; electron tr 20.6 1.1E+02 0.0036 23.7 4.3 35 35-73 1-35 (147)
126 2fzv_A Putative arsenical resi 20.3 1.3E+02 0.0044 26.9 5.2 78 269-369 59-137 (279)
127 2zki_A 199AA long hypothetical 20.0 1.3E+02 0.0044 24.6 5.0 37 33-74 3-39 (199)
No 1
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.94 E-value=2.8e-25 Score=219.04 Aligned_cols=298 Identities=13% Similarity=0.130 Sum_probs=187.8
Q ss_pred CCCCcEEEEECCCCC--------CCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeE
Q 016925 31 RNRTTSVAFFHPNTN--------DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKV 102 (380)
Q Consensus 31 ~~~~~~I~~~~p~~~--------~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~ 102 (380)
..++|||+++.+.+. ..||+++++.+++++|+++| |+|+++|........ . -....+++++
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~----~-----~~~~~~~v~v 85 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRPSQG----E-----IVRVAENLRV 85 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECCCGGGC----S-----EEEEETTEEE
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC--CEEEEEecCCCCCCc----c-----cccccCCeEE
Confidence 467899999986542 24899999999999999998 777777744211000 0 0012234455
Q ss_pred EEeccccccccCCCCccceehhhHhHHH-HHHHH-HHhc-CCcEEEeCCCchhhHH--HHhHhCCcEEEEEeCCcchhhH
Q 016925 103 VHLYRRKWIEESTYPRFTMIGQSFGSVY-LSWEA-LCKF-TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDM 177 (380)
Q Consensus 103 v~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-l~~~-~pDi~~~~~~~~~~~~--l~~~~~~p~v~~~H~p~~~~~~ 177 (380)
+.++.... ..++.... ...+..+. ...+. +++. +||+++.+........ +++..++|+|.++|......
T Consensus 86 ~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-- 159 (438)
T 3c48_A 86 INIAAGPY---EGLSKEEL-PTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK-- 159 (438)
T ss_dssp EEECCSCS---SSCCGGGG-GGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH--
T ss_pred EEecCCCc---cccchhHH-HHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc--
Confidence 55543211 00111011 11111111 01122 3333 4998764432221111 23456899999999643110
Q ss_pred HHhhhccccccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCC-CCceEEecCCCCCC
Q 016925 178 ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTS 256 (380)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~-~~k~~vi~~gvd~~ 256 (380)
.. + .... .... +.....+++.+.+.+|.++++|+.+++.+.+.++. ..++.+|+||+|.+
T Consensus 160 -----~~---~-----~~~~---~~~~---~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~ 220 (438)
T 3c48_A 160 -----NS---Y-----RDDS---DTPE---SEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVE 220 (438)
T ss_dssp -----SC---C------------CCHH---HHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTT
T ss_pred -----cc---c-----cccc---CCcc---hHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCcccc
Confidence 00 0 0000 0000 11122345667789999999999999999987775 46899999999987
Q ss_pred CCCCCCCCC----------CCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCC--CCeEEEEcCCCCCCCHHHHHH
Q 016925 257 GLQVLPLER----------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLP--RPRLQFVGSCRNKSDEERLQS 324 (380)
Q Consensus 257 ~~~~~~~~~----------~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~--~~~LvIvG~g~~~~~~~~~~~ 324 (380)
.+.+.+... ..++++++++||+.++||++.+++|++.+.++. | +++|+|+|+... ++++.++
T Consensus 221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~----p~~~~~l~i~G~~~~--~g~~~~~ 294 (438)
T 3c48_A 221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRD----PDRNLRVIICGGPSG--PNATPDT 294 (438)
T ss_dssp TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHC----TTCSEEEEEECCBC--------CH
T ss_pred ccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhC----CCcceEEEEEeCCCC--CCcHHHH
Confidence 776532111 124678999999999999999999999998764 5 899999998311 1235678
Q ss_pred HHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-echhhHHHH
Q 016925 325 LKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KWQLVYDEF 370 (380)
Q Consensus 325 L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~~~~~~~~ 370 (380)
++++++++|++++|.|+|+++++++.++|+.||++++ ++.|.||-=
T Consensus 295 l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~ 341 (438)
T 3c48_A 295 YRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLV 341 (438)
T ss_dssp HHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHH
T ss_pred HHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchH
Confidence 9999999999999999999999999999999999987 567888743
No 2
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.94 E-value=3.8e-25 Score=217.18 Aligned_cols=310 Identities=14% Similarity=0.034 Sum_probs=190.7
Q ss_pred CCcEEEEECCCCCC--CCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcC------c--cccCCCeE
Q 016925 33 RTTSVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFG------V--ELLHPPKV 102 (380)
Q Consensus 33 ~~~~I~~~~p~~~~--~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g------~--~l~~~v~~ 102 (380)
++|||+++.+.+.. .||+++++.+++++|+++| |+|+++|...+...+....... .++ . ...+++++
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~v 77 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQGEEIGKIR-VFGEEVQVKVSYEERGNLRI 77 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTCSCCEEEEEEE-ETTEEEEEEEEEEEETTEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhcccc-ccCcccceeeeeccCCCceE
Confidence 58999999977533 5999999999999999999 7788887543211000000000 000 0 01234455
Q ss_pred EEeccccccc-cCCCCc-cceehhhHhHH-HHHHHHHH-----hcCCcEEEeCCCchhhHH--HHhHhCCcEEEEEeCCc
Q 016925 103 VHLYRRKWIE-ESTYPR-FTMIGQSFGSV-YLSWEALC-----KFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPT 172 (380)
Q Consensus 103 v~l~~~~~~~-~~~~~~-~~~~~~~~~~~-~~~~~~l~-----~~~pDi~~~~~~~~~~~~--l~~~~~~p~v~~~H~p~ 172 (380)
+.++. .... ...+.. ...+...+..+ ....+.++ ..+||+++.+.......+ +++..++|+|+++|...
T Consensus 78 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~ 156 (439)
T 3fro_A 78 YRIGG-GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLN 156 (439)
T ss_dssp EEEES-GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCC
T ss_pred EEecc-hhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccc
Confidence 55544 1111 111110 00000000000 01112233 458998775543332222 23457899999999654
Q ss_pred chhhHHHhhhccccccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCC-CCceEEecC
Q 016925 173 ISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYP 251 (380)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~-~~k~~vi~~ 251 (380)
....... ...... .... .+.....+++...+.||.++++|+..++.....++. ..++.+|+|
T Consensus 157 ~~~~~~~-------------~~~~~~-~~~~---~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~n 219 (439)
T 3fro_A 157 KSKLPAF-------------YFHEAG-LSEL---APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFN 219 (439)
T ss_dssp CCCEEHH-------------HHHHTT-CGGG---CCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCC
T ss_pred cccCchH-------------HhCccc-cccc---cccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCC
Confidence 2100000 000000 0000 000000234566678999999999999886555443 578999999
Q ss_pred CCCCCCCCCCCCCC--------------CCCCCEEEEEecCC-CccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCC
Q 016925 252 PCDTSGLQVLPLER--------------STEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK 316 (380)
Q Consensus 252 gvd~~~~~~~~~~~--------------~~~~~~il~VGRl~-p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~ 316 (380)
|+|.+.|.+..... .++++.++++||+. ++||++.+++|++.+.++. ..++++|+|+|+|.
T Consensus 220 gvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~--~~~~~~l~i~G~g~-- 295 (439)
T 3fro_A 220 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKK--EFQEMRFIIIGKGD-- 295 (439)
T ss_dssp CCCTTTSCGGGSCSCHHHHHHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSG--GGGGEEEEEECCCC--
T ss_pred CCCchhcCcccccchhhhhHHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcc--cCCCeEEEEEcCCC--
Confidence 99998876531100 02238999999999 9999999999999997642 11689999999874
Q ss_pred CCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-echhhHHHHH
Q 016925 317 SDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KWQLVYDEFL 371 (380)
Q Consensus 317 ~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~~~~~~~~~ 371 (380)
..+.+.+++++++++ +.|.|.|.++++++.++|++||++++ +..|.||-=+
T Consensus 296 --~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~ 347 (439)
T 3fro_A 296 --PELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVA 347 (439)
T ss_dssp --HHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHH
T ss_pred --hhHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHH
Confidence 456689999999998 88899999999999999999999997 4568887433
No 3
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.94 E-value=3.1e-25 Score=223.02 Aligned_cols=309 Identities=16% Similarity=0.083 Sum_probs=194.0
Q ss_pred CCcEEEEECCCCC------------CCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccc--cC
Q 016925 33 RTTSVAFFHPNTN------------DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL--LH 98 (380)
Q Consensus 33 ~~~~I~~~~p~~~------------~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l--~~ 98 (380)
++|||+++.+.+. ..||+|+++.+++++|+++| |+|+++|....... . ....+.+ ..+ .+
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~--~-~~~~~~~-~~~~~~~ 79 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRIKDEN--W-PEFSGEI-DYYQETN 79 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT--CEEEEEEECCCBTT--B-GGGCCSE-EECTTCS
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC--CeEEEEeCCCCccc--c-cchhhhH-HhccCCC
Confidence 4699999997541 24899999999999999998 77777775432110 0 0000000 001 23
Q ss_pred CCeEEEeccccccccCCCCccceehhhHhHH-HHHHHHHHh--cCCcEEEeCCCchhhHH--HHhHhCCcEEEEEeCCcc
Q 016925 99 PPKVVHLYRRKWIEESTYPRFTMIGQSFGSV-YLSWEALCK--FTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTI 173 (380)
Q Consensus 99 ~v~~v~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~--~~pDi~~~~~~~~~~~~--l~~~~~~p~v~~~H~p~~ 173 (380)
+++++.++.... ...+.... +..+..+ ....+.+++ .+||+++.+.......+ +++..++|+|+++|....
T Consensus 80 gv~v~~~~~~~~---~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~ 155 (499)
T 2r60_A 80 KVRIVRIPFGGD---KFLPKEEL-WPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGA 155 (499)
T ss_dssp SEEEEEECCSCS---SCCCGGGC-GGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHH
T ss_pred CeEEEEecCCCc---CCcCHHHH-HHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCccc
Confidence 445555543110 00111011 1111111 112334555 58998775433221122 234568999999996432
Q ss_pred hhhHHHhhhccccccCCCccccccchhhhhHHHH-HHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHH--hC------CCC
Q 016925 174 SLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY-YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL--WG------IPD 244 (380)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~--~~------~~~ 244 (380)
. .. .. +.. ...........+ +.....+++.+.+.+|.++++|+.+++.+.+. ++ ...
T Consensus 156 ~-~~-~~-------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ 221 (499)
T 2r60_A 156 Q-KM-EK-------LNV-----NTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD 221 (499)
T ss_dssp H-HH-HT-------TCC-----CSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG
T ss_pred c-cc-hh-------hcc-----CCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCC
Confidence 1 00 00 000 000001111111 11222355777889999999999999998887 66 346
Q ss_pred ceEEecCCCCCCCCCCCCCC----------------CCCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCC-CeE
Q 016925 245 RIKRVYPPCDTSGLQVLPLE----------------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPR-PRL 307 (380)
Q Consensus 245 k~~vi~~gvd~~~~~~~~~~----------------~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~-~~L 307 (380)
++.||+||+|.+.|.+.+.. ...++++|+++||+.++||++.+++|++.+.++. ++ .+|
T Consensus 222 ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~----~~~~~l 297 (499)
T 2r60_A 222 KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQ----DKANLV 297 (499)
T ss_dssp GEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHH----HHCEEE
T ss_pred CeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhC----CCceEE
Confidence 89999999998877654210 1134689999999999999999999999997654 44 589
Q ss_pred EEEcCCCCC---------CCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhc----cEEEe-echhhHHH
Q 016925 308 QFVGSCRNK---------SDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHL----FVFTM-KWQLVYDE 369 (380)
Q Consensus 308 vIvG~g~~~---------~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a----~vf~~-~~~~~~~~ 369 (380)
+|+|+.... .+.+|.++++++++++|++++|+|+|+++++++.++|+.| |+|++ +..|.||-
T Consensus 298 ~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~ 373 (499)
T 2r60_A 298 LTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGL 373 (499)
T ss_dssp EEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCS
T ss_pred EEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCc
Confidence 999983211 0223478999999999999999999999999999999999 99987 55788874
No 4
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.93 E-value=2.4e-24 Score=208.64 Aligned_cols=272 Identities=15% Similarity=0.144 Sum_probs=186.7
Q ss_pred CCcEEEEECCCCC-CCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEecccccc
Q 016925 33 RTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (380)
Q Consensus 33 ~~~~I~~~~p~~~-~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~~~~ 111 (380)
++|||+++.+.+. ..||+++++.+++++| +| |+|++++.... .. ....... ..+++++.++...
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g--~~v~v~~~~~~--~~-~~~~~~~------~~~~~~~~~~~~~-- 67 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP--ESIVVFASTQN--AE-EAHAYDK------TLDYEVIRWPRSV-- 67 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG--GGEEEEEECSS--HH-HHHHHHT------TCSSEEEEESSSS--
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cC--CeEEEEECCCC--cc-chhhhcc------ccceEEEEccccc--
Confidence 5799999998653 3599999999999999 46 67777775432 11 1111111 1234555554311
Q ss_pred ccCCCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhH--HHHhHhCCc-EEEEEeCCcchhhHHHhhhcccccc
Q 016925 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY--PLARIFGCR-VICYTHYPTISLDMISRVREGSSMY 188 (380)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~--~l~~~~~~p-~v~~~H~p~~~~~~~~~~~~~~~~~ 188 (380)
.++.. .. .....+.+++.+||+++.+....... .+++..++| +|.++|..... .
T Consensus 68 ---~~~~~----~~---~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~----------- 124 (394)
T 3okp_A 68 ---MLPTP----TT---AHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG--W----------- 124 (394)
T ss_dssp ---CCSCH----HH---HHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH--H-----------
T ss_pred ---cccch----hh---HHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh--h-----------
Confidence 11111 11 12234567888999877544332221 133445676 66678843210 0
Q ss_pred CCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCCCCC----
Q 016925 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE---- 264 (380)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~~~~---- 264 (380)
.. . .....+++...+.+|.++++|+.+++.+.+.++...++.+++||+|.+.+.+....
T Consensus 125 ------~~---~--------~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~ 187 (394)
T 3okp_A 125 ------SM---L--------PGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSA 187 (394)
T ss_dssp ------TT---S--------HHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHH
T ss_pred ------hh---c--------chhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHH
Confidence 00 0 11223345566789999999999999999988766789999999998877652111
Q ss_pred ------CCCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcE
Q 016925 265 ------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV 338 (380)
Q Consensus 265 ------~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V 338 (380)
...+++.++++||+.++||++.+++|++.+.++. ++++|+|+|+|+ +.+.+++++ .++.++|
T Consensus 188 ~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~------~~~~l~~~~--~~~~~~v 255 (394)
T 3okp_A 188 TRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAAR----PDAQLLIVGSGR------YESTLRRLA--TDVSQNV 255 (394)
T ss_dssp HHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHS----TTCEEEEECCCT------THHHHHHHT--GGGGGGE
T ss_pred HHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhC----CCeEEEEEcCch------HHHHHHHHH--hcccCeE
Confidence 0134589999999999999999999999998775 899999999874 246788887 6788999
Q ss_pred EEccCCCHHHHHHHHhhccEEEeech--------hhHHHHH
Q 016925 339 EFYKNLLYRSVLTIFMHLFVFTMKWQ--------LVYDEFL 371 (380)
Q Consensus 339 ~f~G~v~~~el~~ly~~a~vf~~~~~--------~~~~~~~ 371 (380)
+|+|+++++++.++|+.||+++++.. |.||-=+
T Consensus 256 ~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~ 296 (394)
T 3okp_A 256 KFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVY 296 (394)
T ss_dssp EEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHH
T ss_pred EEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHH
Confidence 99999999999999999999998554 8887543
No 5
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.92 E-value=1.6e-23 Score=203.98 Aligned_cols=278 Identities=12% Similarity=0.112 Sum_probs=179.5
Q ss_pred cCCCCcEEEEECCCCCC-CCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccc
Q 016925 30 RRNRTTSVAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (380)
Q Consensus 30 ~~~~~~~I~~~~p~~~~-~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~ 108 (380)
...++|||+++.++... .||+++++.+++++|++.| |+|++++....... . .. + ..... +++.++..
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~--~-~~----~--~~~~~-~~~~~~~~ 83 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG--HEVSVLAPASPHVK--L-PD----Y--VVSGG-KAVPIPYN 83 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT--CEEEEEESCCTTSC--C-CT----T--EEECC-CCC-----
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcccc--C-Cc----c--cccCC-cEEecccc
Confidence 45679999999987643 4899999999999999998 77888875432110 0 00 0 00000 11222110
Q ss_pred cccccCCCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhHH--HHhHhCCcEEEEEeCCcchhhHHHhhhcccc
Q 016925 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSS 186 (380)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~--l~~~~~~p~v~~~H~p~~~~~~~~~~~~~~~ 186 (380)
. .+..+....... ....+.+++.+||+++.+........ +++..++|+|+++|.....
T Consensus 84 ~-----~~~~~~~~~~~~---~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------------ 143 (406)
T 2gek_A 84 G-----SVARLRFGPATH---RKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK------------ 143 (406)
T ss_dssp ------------CCHHHH---HHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS------------
T ss_pred C-----CcccccccHHHH---HHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh------------
Confidence 0 000000101011 12234567789997663333222222 2334579999999964311
Q ss_pred ccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCCCCC--
Q 016925 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-- 264 (380)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~~~~-- 264 (380)
....+. ....+ +...+.+|.++++|+..++.+.+.++. .++ +++||+|.+.+.+.+..
T Consensus 144 -------------~~~~~~----~~~~~-~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~~-vi~~~v~~~~~~~~~~~~~ 203 (406)
T 2gek_A 144 -------------SLTLSV----FQGIL-RPYHEKIIGRIAVSDLARRWQMEALGS-DAV-EIPNGVDVASFADAPLLDG 203 (406)
T ss_dssp -------------HHHHHH----HHSTT-HHHHTTCSEEEESSHHHHHHHHHHHSS-CEE-ECCCCBCHHHHHTCCCCTT
T ss_pred -------------hhhHHH----HHHHH-HHHHhhCCEEEECCHHHHHHHHHhcCC-CcE-EecCCCChhhcCCCchhhh
Confidence 000010 11111 256689999999999999999887764 477 99999987655432211
Q ss_pred CCCCCCEEEEEecC-CCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccC
Q 016925 265 RSTEYPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (380)
Q Consensus 265 ~~~~~~~il~VGRl-~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~ 343 (380)
...+++.++++||+ .++||++.+++|++.+.++. |+++|+|+|++. . ++++++++++ .++|.|+|+
T Consensus 204 ~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~~~------~-~~l~~~~~~~--~~~v~~~g~ 270 (406)
T 2gek_A 204 YPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARF----PDVEILIVGRGD------E-DELREQAGDL--AGHLRFLGQ 270 (406)
T ss_dssp CSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTS----TTCEEEEESCSC------H-HHHHHHTGGG--GGGEEECCS
T ss_pred ccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHC----CCeEEEEEcCCc------H-HHHHHHHHhc--cCcEEEEec
Confidence 11235799999999 99999999999999997754 899999999863 2 6788888887 789999999
Q ss_pred CCHHHHHHHHhhccEEEee--chhhHHHHHH
Q 016925 344 LLYRSVLTIFMHLFVFTMK--WQLVYDEFLK 372 (380)
Q Consensus 344 v~~~el~~ly~~a~vf~~~--~~~~~~~~~~ 372 (380)
++++++.++|+.||+++++ +.|.||-=+-
T Consensus 271 ~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~ 301 (406)
T 2gek_A 271 VDDATKASAMRSADVYCAPHLGGESFGIVLV 301 (406)
T ss_dssp CCHHHHHHHHHHSSEEEECCCSCCSSCHHHH
T ss_pred CCHHHHHHHHHHCCEEEecCCCCCCCchHHH
Confidence 9999999999999999987 4899985443
No 6
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.91 E-value=4.9e-23 Score=200.49 Aligned_cols=265 Identities=14% Similarity=0.075 Sum_probs=173.3
Q ss_pred CCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccccccccCCCCccceehhh
Q 016925 46 DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125 (380)
Q Consensus 46 ~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~~~~~~~~~~~~~~~~~~ 125 (380)
..||+++++.+++++|+++| |+|++++...+.. . . ...+++.+..++.. .++.+......
T Consensus 25 ~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~---~-~--------~~~~~i~~~~~~~~------~~~~~~~~~~~ 84 (394)
T 2jjm_A 25 SVGGSGVVGTELGKQLAERG--HEIHFITSGLPFR---L-N--------KVYPNIYFHEVTVN------QYSVFQYPPYD 84 (394)
T ss_dssp --CHHHHHHHHHHHHHHHTT--CEEEEECSSCC----------------CCCTTEEEECCCCC----------CCSCCHH
T ss_pred CCCCHHHHHHHHHHHHHhCC--CEEEEEeCCCCCc---c-c--------ccCCceEEEecccc------ccccccccccc
Confidence 35899999999999999998 8888888643210 0 0 01112223322211 11111000011
Q ss_pred HhHHHHHHHHHHhcCCcEEEeCCCchhhHH--HHh-Hh--CCcEEEEEeCCcchhhHHHhhhccccccCCCccccccchh
Q 016925 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR-IF--GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWL 200 (380)
Q Consensus 126 ~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~--l~~-~~--~~p~v~~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (380)
+.......+.+++.+||+++.+........ +++ .. ++|+|+++|..... . +. ..
T Consensus 85 ~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~----------~~------~~--- 143 (394)
T 2jjm_A 85 LALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT--V----------LG------SD--- 143 (394)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH--T----------TT------TC---
T ss_pred HHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc--c----------cC------CC---
Confidence 111122345577889998775544332221 222 22 58999999853210 0 00 00
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCCCCC-------CCCCCCEEE
Q 016925 201 SQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------RSTEYPAII 273 (380)
Q Consensus 201 ~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~~~~-------~~~~~~~il 273 (380)
.. +..+++...+.+|.++++|+.+++.+.+.++...++.+++||+|.+.+.+.+.. ...+++.++
T Consensus 144 ~~--------~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~i~ 215 (394)
T 2jjm_A 144 PS--------LNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILI 215 (394)
T ss_dssp TT--------THHHHHHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHHTTCC---CEEE
T ss_pred HH--------HHHHHHHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchHHHHHHcCCCCCCeEEE
Confidence 00 112334556789999999999999999987755689999999998777653211 013468999
Q ss_pred EEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHH
Q 016925 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIF 353 (380)
Q Consensus 274 ~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly 353 (380)
++||+.++||++.+++|++.+.++ ++++|+|+|+|+. .+++++++++++++++|.|+|. .+++.++|
T Consensus 216 ~~G~~~~~Kg~~~li~a~~~l~~~-----~~~~l~i~G~g~~------~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~ 282 (394)
T 2jjm_A 216 HISNFRKVKRVQDVVQAFAKIVTE-----VDAKLLLVGDGPE------FCTILQLVKNLHIEDRVLFLGK--QDNVAELL 282 (394)
T ss_dssp EECCCCGGGTHHHHHHHHHHHHHS-----SCCEEEEECCCTT------HHHHHHHHHTTTCGGGBCCCBS--CSCTHHHH
T ss_pred EeeccccccCHHHHHHHHHHHHhh-----CCCEEEEECCchH------HHHHHHHHHHcCCCCeEEEeCc--hhhHHHHH
Confidence 999999999999999999999764 5799999998742 4789999999999999999997 46899999
Q ss_pred hhccEEEee-chhhHHHHHH
Q 016925 354 MHLFVFTMK-WQLVYDEFLK 372 (380)
Q Consensus 354 ~~a~vf~~~-~~~~~~~~~~ 372 (380)
+.||+++++ ..|.||-=+-
T Consensus 283 ~~adv~v~ps~~e~~~~~~~ 302 (394)
T 2jjm_A 283 AMSDLMLLLSEKESFGLVLL 302 (394)
T ss_dssp HTCSEEEECCSCCSCCHHHH
T ss_pred HhCCEEEeccccCCCchHHH
Confidence 999999974 4688875443
No 7
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.91 E-value=4.3e-23 Score=202.33 Aligned_cols=280 Identities=15% Similarity=0.086 Sum_probs=175.1
Q ss_pred hcCCCCcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccc
Q 016925 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (380)
Q Consensus 29 ~~~~~~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~ 108 (380)
++.-++|||+++.+.. .+||+|+++.+++++|++.| |+|.+++...+....+....+... +. ..+.+.+
T Consensus 35 ~~~~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G--~~v~v~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~--- 103 (416)
T 2x6q_A 35 AEKLKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIG--IEARWFVIEGPTEFFNVTKTFHNA----LQ-GNESLKL--- 103 (416)
T ss_dssp HHTTTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTT--CEEEEEECCCCHHHHHHHHHHHHH----HT-TCCSCCC---
T ss_pred hhhhhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCC--CeEEEEEccCCcchhhhhccccee----ec-ccccccc---
Confidence 3445789999999986 46899999999999999998 777666644321000111111110 10 0000111
Q ss_pred cccccCCCCccceehhhHhHH-HHHHHHHHhcCCcEEEeCCCchhhHHHHhHhCCcEEEEEeCCcchhhHHHhhhccccc
Q 016925 109 KWIEESTYPRFTMIGQSFGSV-YLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSM 187 (380)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~pDi~~~~~~~~~~~~l~~~~~~p~v~~~H~p~~~~~~~~~~~~~~~~ 187 (380)
+. .....+..+ ....+.+++.+||+++.+..............+|+++++|.....
T Consensus 104 --------~~--~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------------- 160 (416)
T 2x6q_A 104 --------TE--EMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLWRCHIDLSS------------- 160 (416)
T ss_dssp --------CH--HHHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSCEEEECCSCCSS-------------
T ss_pred --------cH--HHHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCCEEEEEccccCC-------------
Confidence 00 000011000 111223456689987654433222111111238999999854310
Q ss_pred cCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEE-EcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCCCCC--
Q 016925 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAM-VNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-- 264 (380)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii-~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~~~~-- 264 (380)
. . ..+++.+ +...+.+|.++ ++|++.++. +. ..++.+|+||+|...+.+.+..
T Consensus 161 --------~---~----~~~~~~~----~~~~~~~~~~i~~~s~~~~~~----~~-~~~~~vi~ngvd~~~~~~~~~~~~ 216 (416)
T 2x6q_A 161 --------P---N----REFWEFL----RRFVEKYDRYIFHLPEYVQPE----LD-RNKAVIMPPSIDPLSEKNVELKQT 216 (416)
T ss_dssp --------C---C----HHHHHHH----HHHHTTSSEEEESSGGGSCTT----SC-TTTEEECCCCBCTTSTTTSCCCHH
T ss_pred --------c---c----HHHHHHH----HHHHHhCCEEEEechHHHHhh----CC-ccceEEeCCCCChhhhcccccChh
Confidence 0 0 0111121 22345677666 677665542 22 2578999999997655432110
Q ss_pred ----------CCCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCC
Q 016925 265 ----------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV 334 (380)
Q Consensus 265 ----------~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl 334 (380)
...++++++++||+.++||++.+++|++.+.++. |+++|+|+|+|+. .+.++.+.++++++++++
T Consensus 217 ~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~-~~~~~~~~l~~~~~~~~~ 291 (416)
T 2x6q_A 217 EILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKI----PGVQLLLVGVMAH-DDPEGWIYFEKTLRKIGE 291 (416)
T ss_dssp HHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHC----TTCEEEEEECCCT-TCHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhC----CCeEEEEEecCcc-cchhHHHHHHHHHHHhCC
Confidence 0134689999999999999999999999998765 8999999999853 224556789999999999
Q ss_pred CCcEEEccCC---CHHHHHHHHhhccEEEe-echhhHHHHH
Q 016925 335 DGNVEFYKNL---LYRSVLTIFMHLFVFTM-KWQLVYDEFL 371 (380)
Q Consensus 335 ~~~V~f~G~v---~~~el~~ly~~a~vf~~-~~~~~~~~~~ 371 (380)
.++|+|+|++ +++++.++|+.||+|++ +..|.||-=+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~ 332 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTV 332 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHH
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHH
Confidence 9999999955 47899999999999987 5578887543
No 8
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.91 E-value=4.3e-23 Score=201.97 Aligned_cols=272 Identities=13% Similarity=0.019 Sum_probs=177.9
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccccccccC
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~~~~~~~ 114 (380)
|||+++.+.....||+|+++.+++++|+++ + +|++++....... .. .............. ..
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~--~V~v~~~~~~g~~-----------~~---~~~~~~~~~~~~~~-~~ 62 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-H--EVIVFGIHAFGRS-----------VH---ANIEEFDAQTAEHV-RG 62 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-S--EEEEEEESCCSCC-----------SC---SSSEEEEHHHHHHH-TT
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-C--CeEEEeecCCCcc-----------cc---cccccCCccccccc-cc
Confidence 899999988877899999999999999987 4 4555543211000 00 00010000000000 00
Q ss_pred CCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhHH-HHhHhCC----cEEEEEeCCcchhhHHHhhhccccccC
Q 016925 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGC----RVICYTHYPTISLDMISRVREGSSMYN 189 (380)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~-l~~~~~~----p~v~~~H~p~~~~~~~~~~~~~~~~~~ 189 (380)
..+. ...+. ...+.+++.+||+++.+.......+ ++...++ +.+.+.|.....
T Consensus 63 ~~~~-~~~~~------~l~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 120 (413)
T 3oy2_A 63 LNEQ-GFYYS------GLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKN--------------- 120 (413)
T ss_dssp CCST-TCCHH------HHHHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBS---------------
T ss_pred cccc-cchHH------HHHHHHHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchh---------------
Confidence 0000 01111 1234567889998765433222222 2223333 344444422110
Q ss_pred CCccccccchhhhhHHHHHHHHHHHHHHHhcCCC--EEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----CC
Q 016925 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----PL 263 (380)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad--~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----~~ 263 (380)
. ... .+..++.+| .++++|+.+++.+.+ ++.+.++.+++||+|.+.+... +.
T Consensus 121 ------~---~~~------------~~~~~~~~~~~~ii~~S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~~~~~~~~~~ 178 (413)
T 3oy2_A 121 ------I---REN------------LWWIFSHPKVVGVMAMSKCWISDICN-YGCKVPINIVSHFVDTKTIYDARKLVGL 178 (413)
T ss_dssp ------C---CGG------------GGGGGGCTTEEEEEESSTHHHHHHHH-TTCCSCEEECCCCCCCCCCTTHHHHTTC
T ss_pred ------h---HHH------------HHHHHhccCCceEEEcCHHHHHHHHH-cCCCCceEEeCCCCCHHHHHHHHHhcCC
Confidence 0 000 123457778 999999999999999 5545789999999998776321 11
Q ss_pred CCCCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCc------
Q 016925 264 ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN------ 337 (380)
Q Consensus 264 ~~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~------ 337 (380)
....++++|+++||+.++||++.+++|++.+.++. |+++|+|+|+|......++.+.++++++++|++++
T Consensus 179 ~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~----~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~ 254 (413)
T 3oy2_A 179 SEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKY----PDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK 254 (413)
T ss_dssp GGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHC----TTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTT
T ss_pred CcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhC----CCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccc
Confidence 11114689999999999999999999999998875 89999999988643333345789999999999998
Q ss_pred -EEEccCCCHHHHHHHHhhccEEEe-echhhHHHHHH
Q 016925 338 -VEFYKNLLYRSVLTIFMHLFVFTM-KWQLVYDEFLK 372 (380)
Q Consensus 338 -V~f~G~v~~~el~~ly~~a~vf~~-~~~~~~~~~~~ 372 (380)
|.|.|+++++++.++|++||+|++ +..|.||-=+-
T Consensus 255 vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~l 291 (413)
T 3oy2_A 255 IMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSA 291 (413)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHH
T ss_pred eeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHH
Confidence 888999999999999999999997 55688875443
No 9
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.91 E-value=1.1e-23 Score=202.75 Aligned_cols=267 Identities=12% Similarity=0.049 Sum_probs=173.3
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccccccccC
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~~~~~~~ 114 (380)
|||+++.+.....||+++++.+++++|+++| |+|++++...+.. .++++++..++...
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~---------------~~~~~~v~~~~~~~----- 58 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARG--HHVRVYTQSWEGD---------------CPKAFELIQVPVKS----- 58 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTT--CCEEEEESEECSC---------------CCTTCEEEECCCCC-----
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCC--CeEEEEecCCCCC---------------CCCCcEEEEEccCc-----
Confidence 7899998875446899999999999999998 6777777542110 11234455543211
Q ss_pred CCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhHHHHh---HhCCcEEEEEeCCcchhhHHHhhhccccccCCC
Q 016925 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR---IFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (380)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~l~~---~~~~p~v~~~H~p~~~~~~~~~~~~~~~~~~~~ 191 (380)
+... ...........+.+++.+||+++.+..... .+... ....+.+.+.|..
T Consensus 59 -~~~~---~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------------- 113 (374)
T 2iw1_A 59 -HTNH---GRNAEYYAWVQNHLKEHPADRVVGFNKMPG-LDVYFAADVCYAEKVAQEKGF-------------------- 113 (374)
T ss_dssp -SSHH---HHHHHHHHHHHHHHHHSCCSEEEESSCCTT-CSEEECCSCCHHHHHHHHCCH--------------------
T ss_pred -ccch---hhHHHHHHHHHHHHhccCCCEEEEecCCCC-ceeeeccccccceeeeecccc--------------------
Confidence 1110 011111112234567889998775433221 00000 0001111111100
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHhc--CCCEEEEcCHHHHHHHHHHhCC-CCceEEecCCCCCCCCCCCCCCC---
Q 016925 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGS--CADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER--- 265 (380)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~ad~ii~~S~~~~~~i~~~~~~-~~k~~vi~~gvd~~~~~~~~~~~--- 265 (380)
. ..... .++.+..+++...+ .+|.++++|+.+++.+.+.++. ..++.+++||+|.+.+.+.+...
T Consensus 114 --~-----~~~~~--~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~ 184 (374)
T 2iw1_A 114 --L-----YRLTS--RYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSRE 184 (374)
T ss_dssp --H-----HHTSH--HHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHH
T ss_pred --h-----hhhcH--HHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHH
Confidence 0 00000 01223334454444 7999999999999999988776 46899999999987665432110
Q ss_pred --------CCCCCEEEEEecCCCccChHHHHHHHHHHHHH-ccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCC
Q 016925 266 --------STEYPAIISVAQFRPEKAHPLQLEAFSVALRK-LDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDG 336 (380)
Q Consensus 266 --------~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~-~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~ 336 (380)
..+++.++++||+.++||++.+++|++.+.++ . ++++|+|+|++.. ++++++++++++.+
T Consensus 185 ~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~----~~~~l~i~G~g~~-------~~~~~~~~~~~~~~ 253 (374)
T 2iw1_A 185 IYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLR----HNTLLFVVGQDKP-------RKFEALAEKLGVRS 253 (374)
T ss_dssp HHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHH----HTEEEEEESSSCC-------HHHHHHHHHHTCGG
T ss_pred HHHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccC----CceEEEEEcCCCH-------HHHHHHHHHcCCCC
Confidence 13457899999999999999999999998765 3 6899999998641 57899999999999
Q ss_pred cEEEccCCCHHHHHHHHhhccEEEe-echhhHHHH
Q 016925 337 NVEFYKNLLYRSVLTIFMHLFVFTM-KWQLVYDEF 370 (380)
Q Consensus 337 ~V~f~G~v~~~el~~ly~~a~vf~~-~~~~~~~~~ 370 (380)
+|+|+|+. +++.++|+.||++++ +..|.||-=
T Consensus 254 ~v~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~ 286 (374)
T 2iw1_A 254 NVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIV 286 (374)
T ss_dssp GEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHH
T ss_pred cEEECCCc--ccHHHHHHhcCEEEeccccCCcccH
Confidence 99999984 589999999999997 445888753
No 10
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.90 E-value=1.3e-23 Score=221.23 Aligned_cols=316 Identities=13% Similarity=0.072 Sum_probs=194.2
Q ss_pred hcCCCCcEEEEECCCC----------CCCCChhHHHHH--------HHHHHHHhCCCc--eEEEEcCCCCCC-hhhHHHH
Q 016925 29 ARRNRTTSVAFFHPNT----------NDGGGGERVLWC--------AVKAIQEESPDL--DCIVYTGDHDAF-PDSLLAR 87 (380)
Q Consensus 29 ~~~~~~~~I~~~~p~~----------~~~GG~ervl~~--------la~~L~~~g~~~--~v~v~t~~~~~~-~~~~~~~ 87 (380)
+|....++|+++.++. ...||.+.++++ ++++|+++|+++ +|.|+|...+.. ...+.+.
T Consensus 273 ~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~ 352 (816)
T 3s28_A 273 GRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGER 352 (816)
T ss_dssp HHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSS
T ss_pred ccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCc
Confidence 4666789999998887 457999999995 666667789655 366888543111 0000000
Q ss_pred HHhhcCcccc--CCCeEEEeccccccc--cCCCCccceehhhHhHHH-HH-HHHHH--hcCCcEEEeCCCchhhHH--HH
Q 016925 88 AVDRFGVELL--HPPKVVHLYRRKWIE--ESTYPRFTMIGQSFGSVY-LS-WEALC--KFTPLYYFDTSGYAFTYP--LA 157 (380)
Q Consensus 88 ~~~~~g~~l~--~~v~~v~l~~~~~~~--~~~~~~~~~~~~~~~~~~-~~-~~~l~--~~~pDi~~~~~~~~~~~~--l~ 157 (380)
. ..++ +++++++++....-. ....++..+ +..+..+. .. ...++ ..+||+++.+...+...+ ++
T Consensus 353 ~-----e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L-~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~lla 426 (816)
T 3s28_A 353 L-----ERVYDSEYCDILRVPFRTEKGIVRKWISRFEV-WPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLA 426 (816)
T ss_dssp E-----EECTTCSSEEEEEECEEETTEEECSCCCTTTC-GGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHH
T ss_pred c-----eeecCcCCeEEEEecCCCccccccccccHHHH-HHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHH
Confidence 0 0111 245677665422100 001122111 11222221 11 11122 347998775433222222 34
Q ss_pred hHhCCcEEEEEeCCcchhhHHHhhhccccccCCCccccccchhhhhHHHHHHH-HHHHHHHHhcCCCEEEEcCHHHHHHH
Q 016925 158 RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTF-FSWMYGLVGSCADLAMVNSSWTQSHI 236 (380)
Q Consensus 158 ~~~~~p~v~~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~ad~ii~~S~~~~~~i 236 (380)
+..++|.|.+.|..... +.. .. ... .......|... ....++.+++.||.|||+|+..++.+
T Consensus 427 r~~gvP~V~T~Hsl~~~-------k~~-----~~----~~~-~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l 489 (816)
T 3s28_A 427 HKLGVTQCTIAHALEKT-------KYP-----DS----DIY-WKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGS 489 (816)
T ss_dssp HHHTCCEEEECSCCHHH-------HST-----TT----TTT-HHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCC
T ss_pred HHcCCCEEEEEeccccc-------ccc-----cc----cch-hhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHH
Confidence 45789999999954211 000 00 000 00111111110 11235668899999999999888854
Q ss_pred HHHhCC----------------------CCceEEecCCCCCCCCCCCCCCC----------------------------C
Q 016925 237 EKLWGI----------------------PDRIKRVYPPCDTSGLQVLPLER----------------------------S 266 (380)
Q Consensus 237 ~~~~~~----------------------~~k~~vi~~gvd~~~~~~~~~~~----------------------------~ 266 (380)
.+..+. ..++.||+||+|.+.|.+.+... .
T Consensus 490 ~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~ 569 (816)
T 3s28_A 490 KETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKD 569 (816)
T ss_dssp SSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSC
T ss_pred HHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCC
Confidence 332111 12899999999998887642110 2
Q ss_pred CCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCC-----CCCHHHHHHHHHHHHhcCCCCcEEEc
Q 016925 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN-----KSDEERLQSLKDKSIELKVDGNVEFY 341 (380)
Q Consensus 267 ~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~-----~~~~~~~~~L~~la~~lgl~~~V~f~ 341 (380)
.++++|+++||+.++||++.+++|++.+.+.. ++++|+|+|+++. .++.++.++++++++++++.++|.|+
T Consensus 570 ~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~----~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~fl 645 (816)
T 3s28_A 570 KKKPILFTMARLDRVKNLSGLVEWYGKNTRLR----ELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645 (816)
T ss_dssp TTSCEEEEECCCCTTTTHHHHHHHHHHCHHHH----HHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEE
T ss_pred CCCeEEEEEccCcccCCHHHHHHHHHHHHhhC----CCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEc
Confidence 35689999999999999999999999998765 7999999999852 11234678999999999999999999
Q ss_pred cCCC----HHHHHHHHh-hccEEEe-echhhHHHHH
Q 016925 342 KNLL----YRSVLTIFM-HLFVFTM-KWQLVYDEFL 371 (380)
Q Consensus 342 G~v~----~~el~~ly~-~a~vf~~-~~~~~~~~~~ 371 (380)
|+++ .+++..+|+ .||+|++ +..|.||-=+
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDvfV~PS~~Egfglvl 681 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTV 681 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHH
T ss_pred cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHH
Confidence 9554 588999998 5799996 6789998544
No 11
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.90 E-value=1.4e-22 Score=193.41 Aligned_cols=233 Identities=13% Similarity=-0.004 Sum_probs=168.6
Q ss_pred CCcEEEEECCC--------C-----CCCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCC
Q 016925 33 RTTSVAFFHPN--------T-----NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHP 99 (380)
Q Consensus 33 ~~~~I~~~~p~--------~-----~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~ 99 (380)
++|||+++.+. + ...||+++++.+++++|++.| |+|++++....... .+.
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G--~~v~v~~~~~~~~~---------------~~~ 64 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG--HEVFLLGAPGSPAG---------------RPG 64 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT--CEEEEESCTTSCCC---------------STT
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC--CeEEEEecCCCCCC---------------CCc
Confidence 36999999987 1 134899999999999999998 88888886532110 011
Q ss_pred CeEEEeccccccccCCCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhHHHHhHhCCcEEEEEeCCcchhhHHH
Q 016925 100 PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMIS 179 (380)
Q Consensus 100 v~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~l~~~~~~p~v~~~H~p~~~~~~~~ 179 (380)
+++.. .+.. ....+.+++.+||+++.+...... ..++..++| |+++|.....
T Consensus 65 ~~~~~-----------~~~~----------~~l~~~l~~~~~Dvi~~~~~~~~~-~~~~~~~~p-v~~~h~~~~~----- 116 (342)
T 2iuy_A 65 LTVVP-----------AGEP----------EEIERWLRTADVDVVHDHSGGVIG-PAGLPPGTA-FISSHHFTTR----- 116 (342)
T ss_dssp EEECS-----------CCSH----------HHHHHHHHHCCCSEEEECSSSSSC-STTCCTTCE-EEEEECSSSB-----
T ss_pred ceecc-----------CCcH----------HHHHHHHHhcCCCEEEECCchhhH-HHHhhcCCC-EEEecCCCCC-----
Confidence 11111 1110 012345678899987754432211 123446789 9999954310
Q ss_pred hhhccccccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCC
Q 016925 180 RVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ 259 (380)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~ 259 (380)
. ..+|.++++|+.+++.+.+ ..++.+|+||+|.+.+.
T Consensus 117 ----------------~-----------------------~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~~ 153 (342)
T 2iuy_A 117 ----------------P-----------------------VNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARYR 153 (342)
T ss_dssp ----------------C-----------------------SCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGSC
T ss_pred ----------------c-----------------------ccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhcC
Confidence 0 0289999999999998776 35788999999987666
Q ss_pred CCCCCCCCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEE
Q 016925 260 VLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339 (380)
Q Consensus 260 ~~~~~~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~ 339 (380)
+.... ..++++++++||+.++||++.+++|++.+ +++|+|+|+|+. .+.+++++++++ ++|+
T Consensus 154 ~~~~~-~~~~~~i~~vG~~~~~Kg~~~li~a~~~~---------~~~l~i~G~g~~------~~~l~~~~~~~~--~~v~ 215 (342)
T 2iuy_A 154 SAADQ-VAKEDFLLFMGRVSPHKGALEAAAFAHAC---------GRRLVLAGPAWE------PEYFDEITRRYG--STVE 215 (342)
T ss_dssp CSTTC-CCCCSCEEEESCCCGGGTHHHHHHHHHHH---------TCCEEEESCCCC------HHHHHHHHHHHT--TTEE
T ss_pred ccccc-CCCCCEEEEEeccccccCHHHHHHHHHhc---------CcEEEEEeCccc------HHHHHHHHHHhC--CCEE
Confidence 53321 12467999999999999999999999875 589999998742 367788888887 8999
Q ss_pred EccCCCHHHHHHHHhhccEEEeec-----------hhhHHHHH
Q 016925 340 FYKNLLYRSVLTIFMHLFVFTMKW-----------QLVYDEFL 371 (380)
Q Consensus 340 f~G~v~~~el~~ly~~a~vf~~~~-----------~~~~~~~~ 371 (380)
|+|+++++++.++|++||+++++. .|.||-=+
T Consensus 216 ~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~ 258 (342)
T 2iuy_A 216 PIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVV 258 (342)
T ss_dssp ECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHH
T ss_pred EeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHH
Confidence 999999999999999999999864 59888543
No 12
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.89 E-value=1.8e-22 Score=201.91 Aligned_cols=142 Identities=11% Similarity=-0.061 Sum_probs=114.2
Q ss_pred HHHHhcCCCEEEEcCHHHHHHHHHH-hC---------CCCceEEecCCCCCCCCCCCCCC--------------------
Q 016925 215 YGLVGSCADLAMVNSSWTQSHIEKL-WG---------IPDRIKRVYPPCDTSGLQVLPLE-------------------- 264 (380)
Q Consensus 215 ~~~~~~~ad~ii~~S~~~~~~i~~~-~~---------~~~k~~vi~~gvd~~~~~~~~~~-------------------- 264 (380)
++...+.+|.++++|+.+++.+.+. ++ ...++.+|+||+|.+.|.+....
T Consensus 200 ~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 1rzu_A 200 LKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKA 279 (485)
T ss_dssp HHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHH
T ss_pred HHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHH
Confidence 3455678999999999999998764 33 24689999999998877653210
Q ss_pred ------CCC-CCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCc
Q 016925 265 ------RST-EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (380)
Q Consensus 265 ------~~~-~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~ 337 (380)
... ++++|+++||+.++||++.+++|++.+.+ ++++|+|+|+|+ .++.+++++++++++ ++
T Consensus 280 ~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~------~~~~l~ivG~g~----~~~~~~l~~~~~~~~--~~ 347 (485)
T 1rzu_A 280 VAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS------LGGRLVVLGAGD----VALEGALLAAASRHH--GR 347 (485)
T ss_dssp HHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH------TTCEEEEEECBC----HHHHHHHHHHHHHTT--TT
T ss_pred HHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh------cCceEEEEeCCc----hHHHHHHHHHHHhCC--Cc
Confidence 011 25699999999999999999999999965 589999999873 356789999999986 78
Q ss_pred EE-EccCCCHHHHHHHHhhccEEEee-chhhHHH
Q 016925 338 VE-FYKNLLYRSVLTIFMHLFVFTMK-WQLVYDE 369 (380)
Q Consensus 338 V~-f~G~v~~~el~~ly~~a~vf~~~-~~~~~~~ 369 (380)
|+ |.|. +++++.++|+.||+|+++ ..|.||-
T Consensus 348 v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~ 380 (485)
T 1rzu_A 348 VGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGL 380 (485)
T ss_dssp EEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCS
T ss_pred EEEecCC-CHHHHHHHHhcCCEEEECcccCCCCH
Confidence 97 7888 788889999999999974 4588874
No 13
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.89 E-value=1.4e-21 Score=195.38 Aligned_cols=308 Identities=14% Similarity=0.022 Sum_probs=181.2
Q ss_pred cEEEEECCCCC---CCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHh--------hcC--ccc----c
Q 016925 35 TSVAFFHPNTN---DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD--------RFG--VEL----L 97 (380)
Q Consensus 35 ~~I~~~~p~~~---~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~--------~~g--~~l----~ 97 (380)
|||+++.+.+. ..||+|+++.+++++|+++| |+|+|+|...+ . ......+ .++ ..+ .
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG--VDARVLLPAFP---D-IRRGVTDAQVVSRRDTFAGHITLLFGHY 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT--CEEEEEEECCH---H-HHHHCTTCEEEEEECCTTCCEEEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC--CEEEEEecCcc---c-cccccccceeEEEecccCCcEEEEEEEE
Confidence 79999988652 25899999999999999999 77888875431 1 1111000 000 000 1
Q ss_pred CCCeEEEeccccccccC--CCCcc---ceehhhHh--HH-HHHHHHHH----hcCCcEEEeCCCchhhHH-H-H-hHhCC
Q 016925 98 HPPKVVHLYRRKWIEES--TYPRF---TMIGQSFG--SV-YLSWEALC----KFTPLYYFDTSGYAFTYP-L-A-RIFGC 162 (380)
Q Consensus 98 ~~v~~v~l~~~~~~~~~--~~~~~---~~~~~~~~--~~-~~~~~~l~----~~~pDi~~~~~~~~~~~~-l-~-~~~~~ 162 (380)
++++++.++........ .+... ........ .+ ....+.++ +.+||+++.+.......+ + + +..++
T Consensus 75 ~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~~ 154 (485)
T 2qzs_A 75 NGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPA 154 (485)
T ss_dssp TTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCSS
T ss_pred CCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCCC
Confidence 34455554321111000 11000 00000000 00 01122333 278998775443332233 2 2 34579
Q ss_pred cEEEEEeCCcchhhHHHhhhccccccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHH-hC
Q 016925 163 RVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-WG 241 (380)
Q Consensus 163 p~v~~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~-~~ 241 (380)
|+|+++|........ +. . .+.... .....+.......+ ....+++...+.+|.++++|+.+++.+.+. ++
T Consensus 155 p~v~t~H~~~~~~~~-~~---~--~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~ 225 (485)
T 2qzs_A 155 KSVFTVHNLAYQGMF-YA---H--HMNDIQ-LPWSFFNIHGLEFN--GQISFLKAGLYYADHITAVSPTYAREITEPQFA 225 (485)
T ss_dssp EEEEEESCTTCCCEE-EG---G--GGGTTT-CCGGGCSTTTTEET--TEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHH
T ss_pred CEEEEecCccccCCC-CH---H--HHHhcC-CCchhccccccccc--ccccHHHHHHHhcCeEEecCHHHHHHHhccccC
Confidence 999999964311000 00 0 000000 00000000000000 000133455678999999999999988764 43
Q ss_pred C---------C--CceEEecCCCCCCCCCCCCCC----------------------------CCCCCCEEEEEecCCCcc
Q 016925 242 I---------P--DRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAIISVAQFRPEK 282 (380)
Q Consensus 242 ~---------~--~k~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~il~VGRl~p~K 282 (380)
. . .++.+|+||+|.+.|.+.... ...+.++++++||++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~K 305 (485)
T 2qzs_A 226 YGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQK 305 (485)
T ss_dssp TTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGG
T ss_pred cchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCcccc
Confidence 2 1 689999999998877653210 001468999999999999
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEE-EccCCCHHHHHHHHhhccEEEe
Q 016925 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRSVLTIFMHLFVFTM 361 (380)
Q Consensus 283 ~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~-f~G~v~~~el~~ly~~a~vf~~ 361 (380)
|++.+++|++.+.+ ++++|+|+|+|+ .++.+++++++++++ ++|. |.|. +++++.++|+.||+|++
T Consensus 306 g~~~li~a~~~l~~------~~~~l~ivG~g~----~~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~ 372 (485)
T 2qzs_A 306 GLDLVLEALPGLLE------QGGQLALLGAGD----PVLQEGFLAAAAEYP--GQVGVQIGY-HEAFSHRIMGGADVILV 372 (485)
T ss_dssp CHHHHHHHHHHHHH------TTCEEEEEEEEC----HHHHHHHHHHHHHST--TTEEEEESC-CHHHHHHHHHHCSEEEE
T ss_pred CHHHHHHHHHHHhh------CCcEEEEEeCCc----hHHHHHHHHHHHhCC--CcEEEeCCC-CHHHHHHHHHhCCEEEE
Confidence 99999999999965 589999999863 356789999999986 7896 8888 78888999999999997
Q ss_pred e-chhhHHHH
Q 016925 362 K-WQLVYDEF 370 (380)
Q Consensus 362 ~-~~~~~~~~ 370 (380)
+ ..|.||-=
T Consensus 373 pS~~E~~g~~ 382 (485)
T 2qzs_A 373 PSRFEPCGLT 382 (485)
T ss_dssp CCSCCSSCSH
T ss_pred CCccCCCcHH
Confidence 4 46888743
No 14
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.85 E-value=2.2e-19 Score=182.27 Aligned_cols=142 Identities=12% Similarity=0.022 Sum_probs=114.2
Q ss_pred HHHhcCCCEEEEcCHHHHHHHHHHhCC---------CCceEEecCCCCCCCCCCCCC-----------------------
Q 016925 216 GLVGSCADLAMVNSSWTQSHIEKLWGI---------PDRIKRVYPPCDTSGLQVLPL----------------------- 263 (380)
Q Consensus 216 ~~~~~~ad~ii~~S~~~~~~i~~~~~~---------~~k~~vi~~gvd~~~~~~~~~----------------------- 263 (380)
+..+..||.|+|+|+..++++...++. ..++.+|+||+|.+.|.+...
T Consensus 236 k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l 315 (536)
T 3vue_A 236 KAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEAL 315 (536)
T ss_dssp HHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHH
Confidence 455668999999999999998875431 357999999999887765210
Q ss_pred ------CCCCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCc
Q 016925 264 ------ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (380)
Q Consensus 264 ------~~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~ 337 (380)
...++.|+|++|||++++||++.+|+|++.+.+ .+++|+|+|.|. .++.+.++.++..+ .++
T Consensus 316 ~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~------~~~~l~l~G~G~----~~~~~~~~~~~~~~--~~~ 383 (536)
T 3vue_A 316 QAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ------EDVQIVLLGTGK----KKFEKLLKSMEEKY--PGK 383 (536)
T ss_dssp HHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT------SSCEEEEECCBC----HHHHHHHHHHHHHS--TTT
T ss_pred HHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh------hCCeEEEEeccC----chHHHHHHHHHhhc--CCc
Confidence 011356899999999999999999999999964 578999999874 34556677766654 578
Q ss_pred EEEccCCCHHHHHHHHhhccEEEe-echhhHHH
Q 016925 338 VEFYKNLLYRSVLTIFMHLFVFTM-KWQLVYDE 369 (380)
Q Consensus 338 V~f~G~v~~~el~~ly~~a~vf~~-~~~~~~~~ 369 (380)
|.|.|..+++++..+|+.||+|++ +..|+||-
T Consensus 384 v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl 416 (536)
T 3vue_A 384 VRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGL 416 (536)
T ss_dssp EEEECSCCHHHHHHHHHHCSEEEECCSCCSSCS
T ss_pred eEEEEeccHHHHHHHHHhhheeecccccCCCCH
Confidence 999999999999999999999998 57799984
No 15
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.82 E-value=1.1e-19 Score=178.94 Aligned_cols=268 Identities=11% Similarity=0.039 Sum_probs=163.4
Q ss_pred cCCCCcEEEEECCCCCCC--CChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEecc
Q 016925 30 RRNRTTSVAFFHPNTNDG--GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR 107 (380)
Q Consensus 30 ~~~~~~~I~~~~p~~~~~--GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~ 107 (380)
..+++|||+++.+.+..+ .|+++.+.+++++|+++| |+|.|+|....... +.... ++ ...+..+..
T Consensus 42 ~~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G--heV~Vvt~~~~~~~----~~~~~-----~~-~~~~~~~~~ 109 (413)
T 2x0d_A 42 SSIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK--FKKRIILTDATPNP----KDLQS-----FK-SFKYVMPEE 109 (413)
T ss_dssp CCCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT--CEEEEEESSCCCCH----HHHGG-----GT-TSEECCTTC
T ss_pred CCCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC--CceEEEEecCCCCh----HHHHh-----hh-ccceeeccC
Confidence 357899999999998653 266678999999999999 88888886532211 11111 11 011111110
Q ss_pred ccccccCCC-CccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhHHHHhH----------hCCcEEEEEeCCcchhh
Q 016925 108 RKWIEESTY-PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARI----------FGCRVICYTHYPTISLD 176 (380)
Q Consensus 108 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~l~~~----------~~~p~v~~~H~p~~~~~ 176 (380)
. ..+ +....+...+. ..+...++|+++.+.... ....... ...|.+..+|.-. ..
T Consensus 110 ~-----~~~~~~i~~~~~~~~------~~~~~~~~Dvv~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~ 175 (413)
T 2x0d_A 110 D-----KDFALQIVPFNDRYN------RTIPVAKHDIFIATAWWT-AYAAQRIVSWQSDTYGIPPNKILYIIQDFE--PG 175 (413)
T ss_dssp C-----CCCSEEEEECSCCTT------CCEEECTTEEEEECSHHH-HHHHHHHHHHHHHHHTCCCCCEEEEECSCG--GG
T ss_pred C-----ccccceeeecccccc------ccccCCCCCEEEEehHHH-HHHHHHhhhhhhhhcccccCcEEEEEeech--hh
Confidence 0 000 00000000000 001123589887654322 1111111 1346666555311 00
Q ss_pred HHHhhhccccccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCC--EEEEcCHHHHHHHHHHhCCCCceEEecCCCC
Q 016925 177 MISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCD 254 (380)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad--~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd 254 (380)
. ..+.. . ..+.+...+.++ .+||+|+++++.+++..-...++.+++||+|
T Consensus 176 ~----------------------~~~~~-~-----~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d 227 (413)
T 2x0d_A 176 F----------------------YQWSS-Q-----YVLAESTYKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKIN 227 (413)
T ss_dssp G----------------------SCSSH-H-----HHHHHHTTSCCSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCC
T ss_pred c----------------------CccCh-H-----HHHHHHHhccCCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcC
Confidence 0 00000 0 112234455554 6899999999999885211256889999998
Q ss_pred CCCCCCCCCCCCCCCCEEEEEecC-CCccChHHHHHHHHHHHHHccCCCCC---CeEEEEcCCCCCCCHHHHHHHHHHHH
Q 016925 255 TSGLQVLPLERSTEYPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPR---PRLQFVGSCRNKSDEERLQSLKDKSI 330 (380)
Q Consensus 255 ~~~~~~~~~~~~~~~~~il~VGRl-~p~K~~d~li~A~~~l~~~~~~~~~~---~~LvIvG~g~~~~~~~~~~~L~~la~ 330 (380)
.+.|.+... ...+++.++++||+ .++||++.+|+|++.+.++. |+ ++|+|+|++... .
T Consensus 228 ~~~~~~~~~-~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~----~~~~~~~l~ivG~~~~~-------------~ 289 (413)
T 2x0d_A 228 TTLKNYIND-KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKY----DRSNEWKIISVGEKHKD-------------I 289 (413)
T ss_dssp HHHHTTTTS-CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHC----TTGGGCEEEEEESCCCC-------------E
T ss_pred chhhccccc-ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhC----CCCCceEEEEEcCCchh-------------h
Confidence 654433211 11245789999997 68999999999999997764 64 899999987421 3
Q ss_pred hcCCCCcEEEccCCCHHHHHHHHhhccEEEeec-hhhHHH
Q 016925 331 ELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKW-QLVYDE 369 (380)
Q Consensus 331 ~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~-~~~~~~ 369 (380)
++++.++|+|+|.++++|++++|+.||+|+++. .|.||-
T Consensus 290 ~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~ 329 (413)
T 2x0d_A 290 ALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSY 329 (413)
T ss_dssp EEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCS
T ss_pred hcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCc
Confidence 578889999999999999999999999999854 599873
No 16
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.79 E-value=7.6e-19 Score=172.46 Aligned_cols=175 Identities=13% Similarity=0.032 Sum_probs=124.0
Q ss_pred CCcEEEeCCCchhhH-HHHhHhCCcEEEEEeCCcchhhHHHhhhccccccCCCccccccchhhhhHHHHHHHHHHHHHHH
Q 016925 140 TPLYYFDTSGYAFTY-PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLV 218 (380)
Q Consensus 140 ~pDi~~~~~~~~~~~-~l~~~~~~p~v~~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 218 (380)
++|+++...+....+ .+++..++|.++++|........ .. . +....+++..
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-----------------~~---~--------~~~~~~~~~~ 175 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTI-----------------NV---A--------SYIEREFDRV 175 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHHCTTSEEEEEESSCHHHH-----------------TC---C--------HHHHHHHHHH
T ss_pred CCCEEEECCchHHHHHHHHHHhCCCEEEEEeccchhhcc-----------------cc---c--------HHHHHHHHHH
Confidence 689766443332211 24455689999999964421000 00 0 0122345667
Q ss_pred hcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCCCCCCCCCCCEEEEEecCCCccChHHHHHHHHHHHHHc
Q 016925 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKL 298 (380)
Q Consensus 219 ~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~~~~~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~ 298 (380)
.+.+|.++++|+..++.+.+.. ++.||+||+|.+.|.+.......++++++|+||+.++||+ ++.+.+..
T Consensus 176 ~~~ad~vi~~S~~~~~~~~~~~----~i~vipngvd~~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~ 245 (406)
T 2hy7_A 176 APTLDVIALVSPAMAAEVVSRD----NVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEF------FVVASKAF 245 (406)
T ss_dssp GGGCSEEEESCGGGGGGCSCST----TEEECCCCBCTTHHHHHCSCSCCSSEEEEEECCTTBCHHH------HHHHHHHC
T ss_pred HHhCCEEEEcCHHHHHHHHhcC----CEEEEcCCcChHhcCcccccccCCCcEEEEEeccccccCH------HHHHHHhC
Confidence 8899999999999988776532 7899999999876653221111223789999999999998 34444443
Q ss_pred cCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-echhhHHHH
Q 016925 299 DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KWQLVYDEF 370 (380)
Q Consensus 299 ~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~~~~~~~~ 370 (380)
|+++|+|+|+|+ ++++++.++|+|+|.++++|+.++|++||+|++ +..|.||.-
T Consensus 246 ----~~~~l~ivG~g~--------------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~ 300 (406)
T 2hy7_A 246 ----PQVTFHVIGSGM--------------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVY 300 (406)
T ss_dssp ----TTEEEEEESCSS--------------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTT
T ss_pred ----CCeEEEEEeCch--------------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchH
Confidence 899999999862 567889999999999999999999999999997 557888753
No 17
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.76 E-value=1.8e-17 Score=169.00 Aligned_cols=253 Identities=12% Similarity=0.055 Sum_probs=164.3
Q ss_pred CCCCcEEEEECCCCCCCCChhHHHHHHHHH--HHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccc
Q 016925 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKA--IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (380)
Q Consensus 31 ~~~~~~I~~~~p~~~~~GG~ervl~~la~~--L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~ 108 (380)
.+++|||+++.+.+. .||+++++.+++++ +.+.| ++|++++...+ ..+...++++. .+ .+..+.
T Consensus 202 ~~~~~rI~~~~~~~~-~~g~~~~~~~l~~~L~~~~~~--~~v~~~~~~~~-~~~~~~~~~~~-~~-------~~~~~~-- 267 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFG-AHPTGLLTVALFEALQRRQPD--LQMHLFATSGD-DGSTLRTRLAQ-AS-------TLHDVT-- 267 (568)
T ss_dssp SSSCEEEEEEESCSS-SSHHHHHHHHHHHHHHHHCTT--EEEEEEESSCC-CSCHHHHHHHH-TS-------EEEECT--
T ss_pred CCCCeEEEEECcccc-cChHHHHHHHHHhhccCCccc--EEEEEEECCCC-CccHHHHHHHh-cC-------eEEECC--
Confidence 367899999999885 47899999999999 66666 88888875421 11122222221 11 122211
Q ss_pred cccccCCCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCch--hhHHHHhHhCCcEEEEEeCCcchhhHHHhhhcccc
Q 016925 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYA--FTYPLARIFGCRVICYTHYPTISLDMISRVREGSS 186 (380)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~--~~~~l~~~~~~p~v~~~H~p~~~~~~~~~~~~~~~ 186 (380)
.+. . ....+.+++.+|||+++..++. ..+++......|++++.|.....
T Consensus 268 ------~~~----~-------~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 318 (568)
T 2vsy_A 268 ------ALG----H-------LATAKHIRHHGIDLLFDLRGWGGGGRPEVFALRPAPVQVNWLAYPGT------------ 318 (568)
T ss_dssp ------TCC----H-------HHHHHHHHHTTCSEEEECSSCTTCSSCHHHHTCCSSEEEEESSSSSC------------
T ss_pred ------CCC----H-------HHHHHHHHhCCCCEEEECCCCCCcchHHHHhcCCCceeEeeecCCcc------------
Confidence 010 0 1123457888999887544332 11122222346776666531100
Q ss_pred ccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCC----CC
Q 016925 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV----LP 262 (380)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~----~~ 262 (380)
. . .... ....+|.++++|+..+. +. +++.+|+|.+......+ .+
T Consensus 319 -~-------~---~~~~--------------~~~~~d~~i~~s~~~~~-----~~--~~i~~ipn~~~~~~~~~~~~~~~ 366 (568)
T 2vsy_A 319 -S-------G---APWM--------------DYVLGDAFALPPALEPF-----YS--EHVLRLQGAFQPSDTSRVVAEPP 366 (568)
T ss_dssp -C-------C---CTTC--------------CEEEECTTTSCTTTGGG-----CS--SEEEECSSCSCCCCTTCCCCCCC
T ss_pred -c-------C---CCCc--------------eEEEECCCcCCcccccC-----Cc--ceeEcCCCcCCCCCCCCCCCCCC
Confidence 0 0 0000 01247888888876543 43 67888988554332111 01
Q ss_pred CCC---CCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEc-CCCCCCCHHHHHHHHHHHHhcCCC-Cc
Q 016925 263 LER---STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG-SCRNKSDEERLQSLKDKSIELKVD-GN 337 (380)
Q Consensus 263 ~~~---~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG-~g~~~~~~~~~~~L~~la~~lgl~-~~ 337 (380)
... .+++.+++++||+.+ ||++.+|+|++.+.++. |+++|+|+| +| +..++++++++++|++ ++
T Consensus 367 ~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~----~~~~l~i~G~~g------~~~~~l~~~~~~~~l~~~~ 435 (568)
T 2vsy_A 367 SRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREV----PDSVLWLLSGPG------EADARLRAFAHAQGVDAQR 435 (568)
T ss_dssp CTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHC----TTCEEEEECCST------THHHHHHHHHHHTTCCGGG
T ss_pred CccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhC----CCcEEEEecCCH------HHHHHHHHHHHHcCCChhH
Confidence 100 123467889999999 99999999999998775 899999999 54 2468999999999998 99
Q ss_pred EEEccCCCHHHHHHHHhhccEEEeechhhHHH
Q 016925 338 VEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDE 369 (380)
Q Consensus 338 V~f~G~v~~~el~~ly~~a~vf~~~~~~~~~~ 369 (380)
|+|+|.++++++..+|+.||+|+++..-.||-
T Consensus 436 v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~ 467 (568)
T 2vsy_A 436 LVFMPKLPHPQYLARYRHADLFLDTHPYNAHT 467 (568)
T ss_dssp EEEECCCCHHHHHHHGGGCSEEECCSSSCCSH
T ss_pred EEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcH
Confidence 99999999999999999999999876546664
No 18
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.72 E-value=9.5e-17 Score=154.00 Aligned_cols=250 Identities=8% Similarity=-0.029 Sum_probs=153.7
Q ss_pred CcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEecccccccc
Q 016925 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (380)
Q Consensus 34 ~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~~~~~~ 113 (380)
+|||+++... .||.++.+.+++++|+++| |+|.+++..... .. +... ..| +++..++...+...
T Consensus 6 ~mkIl~~~~~---~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~-~~---~~~~-~~g------~~~~~~~~~~~~~~ 69 (364)
T 1f0k_A 6 GKRLMVMAGG---TGGHVFPGLAVAHHLMAQG--WQVRWLGTADRM-EA---DLVP-KHG------IEIDFIRISGLRGK 69 (364)
T ss_dssp -CEEEEECCS---SHHHHHHHHHHHHHHHTTT--CEEEEEECTTST-HH---HHGG-GGT------CEEEECCCCCCTTC
T ss_pred CcEEEEEeCC---CccchhHHHHHHHHHHHcC--CEEEEEecCCcc-hh---hhcc-ccC------CceEEecCCccCcC
Confidence 3899999743 3799999999999999988 788888764321 11 1111 113 33444332110000
Q ss_pred CCCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhH-H-HHhHhCCcEEEEEeCCcchhhHHHhhhccccccCCC
Q 016925 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY-P-LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (380)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~-~-l~~~~~~p~v~~~H~p~~~~~~~~~~~~~~~~~~~~ 191 (380)
..+..+......+.......+.+++.+||+++.+....... . .++..++|.+++.|....
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~------------------ 131 (364)
T 1f0k_A 70 GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIA------------------ 131 (364)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSC------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCC------------------
Confidence 00000000111111112234557788999877554332111 1 234568999987773210
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCCCC----CCCC
Q 016925 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----ERST 267 (380)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~~~----~~~~ 267 (380)
. . ..++..+.+|.+++.|+.. ++ ++.+++||++.+.+.+... ....
T Consensus 132 ----~-----~-----------~~~~~~~~~d~v~~~~~~~-------~~---~~~~i~n~v~~~~~~~~~~~~~~~~~~ 181 (364)
T 1f0k_A 132 ----G-----L-----------TNKWLAKIATKVMQAFPGA-------FP---NAEVVGNPVRTDVLALPLPQQRLAGRE 181 (364)
T ss_dssp ----C-----H-----------HHHHHTTTCSEEEESSTTS-------SS---SCEECCCCCCHHHHTSCCHHHHHTTCC
T ss_pred ----c-----H-----------HHHHHHHhCCEEEecChhh-------cC---CceEeCCccchhhcccchhhhhcccCC
Confidence 0 0 1123456899999988643 32 5779999998654432110 0112
Q ss_pred CCCE-EEEEecCCCccChHHHHHHHHHHHHHccCCCCCCe-EEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016925 268 EYPA-IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR-LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (380)
Q Consensus 268 ~~~~-il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~-LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~ 345 (380)
++++ +++.||+.++|+++.+++|++.+.+ +++ ++++|++. .+++++++++++++ +|.|+|++
T Consensus 182 ~~~~il~~~g~~~~~k~~~~li~a~~~l~~-------~~~~l~i~G~~~-------~~~l~~~~~~~~~~-~v~~~g~~- 245 (364)
T 1f0k_A 182 GPVRVLVVGGSQGARILNQTMPQVAAKLGD-------SVTIWHQSGKGS-------QQSVEQAYAEAGQP-QHKVTEFI- 245 (364)
T ss_dssp SSEEEEEECTTTCCHHHHHHHHHHHHHHGG-------GEEEEEECCTTC-------HHHHHHHHHHTTCT-TSEEESCC-
T ss_pred CCcEEEEEcCchHhHHHHHHHHHHHHHhcC-------CcEEEEEcCCch-------HHHHHHHHhhcCCC-ceEEecch-
Confidence 3454 4566799999999999999998842 577 67788763 26889999999984 79999998
Q ss_pred HHHHHHHHhhccEEEeech
Q 016925 346 YRSVLTIFMHLFVFTMKWQ 364 (380)
Q Consensus 346 ~~el~~ly~~a~vf~~~~~ 364 (380)
+++.++|+.||+|+++..
T Consensus 246 -~~~~~~~~~ad~~v~~sg 263 (364)
T 1f0k_A 246 -DDMAAAYAWADVVVCRSG 263 (364)
T ss_dssp -SCHHHHHHHCSEEEECCC
T ss_pred -hhHHHHHHhCCEEEECCc
Confidence 589999999999999753
No 19
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.66 E-value=3.3e-15 Score=143.70 Aligned_cols=132 Identities=10% Similarity=0.044 Sum_probs=95.8
Q ss_pred cCCCEEEEcCHHHHHHHHHHhCC-CCceEEecCC-CCCCCCCCCC-CC-----C-CCCCCEEEEEecCCCc-cChHHHHH
Q 016925 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP-CDTSGLQVLP-LE-----R-STEYPAIISVAQFRPE-KAHPLQLE 289 (380)
Q Consensus 220 ~~ad~ii~~S~~~~~~i~~~~~~-~~k~~vi~~g-vd~~~~~~~~-~~-----~-~~~~~~il~VGRl~p~-K~~d~li~ 289 (380)
+.+|.++++|+.+++.+.+. +. ++++.+++|| +|...+.+.. .. . ..++..++++||+.++ ||++.+++
T Consensus 149 ~~~d~ii~~s~~~~~~~~~~-g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~ 227 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQKE-NKDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGEPMRNMFR 227 (375)
T ss_dssp HHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTHHHHHHHH
T ss_pred hhhheeeCCCHHHHHHHHHc-CCCcccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchhHHHHHHH
Confidence 45899999999999998874 54 4689999999 6643332211 00 0 1122357799999986 99999999
Q ss_pred HHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeec
Q 016925 290 AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKW 363 (380)
Q Consensus 290 A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~ 363 (380)
|++.+.++. |++++++ |.++ +.++.+.+++++ +..++|+|+|.++..++.++|+.||+|+++.
T Consensus 228 a~~~l~~~~----~~~~~i~-~~g~---~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s 290 (375)
T 3beo_A 228 AIKRLVDKH----EDVQVVY-PVHM---NPVVRETANDIL---GDYGRIHLIEPLDVIDFHNVAARSYLMLTDS 290 (375)
T ss_dssp HHHHHHHHC----TTEEEEE-ECCS---CHHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHhhC----CCeEEEE-eCCC---CHHHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHHhCcEEEECC
Confidence 999997764 7898655 5443 223334444442 3347999999999999999999999999876
No 20
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.59 E-value=2.7e-14 Score=137.81 Aligned_cols=133 Identities=8% Similarity=-0.030 Sum_probs=97.3
Q ss_pred hcCCCEEEEcCHHHHHHHHHHhCC-CCceEEecCCC-CCCCCCCC--------------CCC-CCCCC-CEEEEEecCCC
Q 016925 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL--------------PLE-RSTEY-PAIISVAQFRP 280 (380)
Q Consensus 219 ~~~ad~ii~~S~~~~~~i~~~~~~-~~k~~vi~~gv-d~~~~~~~--------------~~~-~~~~~-~~il~VGRl~p 280 (380)
.+.+|.++++|+.+++.+.+ ++. ++++.+++||+ |...+.+. ... ...++ ..++++||+.+
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~ 217 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRES 217 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSS
T ss_pred HhhccEEEcCcHHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccc
Confidence 45699999999999999877 454 46788999984 42111100 000 10123 36789999998
Q ss_pred c-cChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEE
Q 016925 281 E-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVF 359 (380)
Q Consensus 281 ~-K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf 359 (380)
+ ||++.+++|++.+.++. |+++|+++++. +.++.+++++++.. .++|+|+|.++.+++.++|+.||+|
T Consensus 218 ~~kg~~~li~a~~~l~~~~----~~~~l~i~~g~----~~~~~~~l~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~~ 286 (384)
T 1vgv_A 218 FGRGFEEICHALADIATTH----QDIQIVYPVHL----NPNVREPVNRILGH---VKNVILIDPQEYLPFVWLMNHAWLI 286 (384)
T ss_dssp CCHHHHHHHHHHHHHHHHC----TTEEEEEECCB----CHHHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHCSEE
T ss_pred cchHHHHHHHHHHHHHhhC----CCeEEEEEcCC----CHHHHHHHHHHhhc---CCCEEEeCCCCHHHHHHHHHhCcEE
Confidence 7 99999999999998765 88999886432 12355667766532 4689999999889999999999999
Q ss_pred Eeec
Q 016925 360 TMKW 363 (380)
Q Consensus 360 ~~~~ 363 (380)
+++.
T Consensus 287 v~~S 290 (384)
T 1vgv_A 287 LTDS 290 (384)
T ss_dssp EESS
T ss_pred EECC
Confidence 9875
No 21
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.55 E-value=5.9e-13 Score=129.04 Aligned_cols=134 Identities=10% Similarity=0.052 Sum_probs=100.0
Q ss_pred HHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCC-CCCCCCCCCCCCCCCCCEEEEEecCCCccChHHHHHHHHHH
Q 016925 216 GLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVA 294 (380)
Q Consensus 216 ~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gv-d~~~~~~~~~~~~~~~~~il~VGRl~p~K~~d~li~A~~~l 294 (380)
+.+.+.+|.++++|+.+++.+.+. +.+ ++.|++|+. +.... +... .+++++++.|+ .+||++.+|+|++.+
T Consensus 148 ~~~~~~~d~ii~~S~~~~~~l~~~-g~~-ki~vi~n~~f~~~~~---~~~~-l~~~vi~~~~~--~~k~~~~ll~A~~~l 219 (374)
T 2xci_A 148 KILSKKFDLIIMRTQEDVEKFKTF-GAK-RVFSCGNLKFICQKG---KGIK-LKGEFIVAGSI--HTGEVEIILKAFKEI 219 (374)
T ss_dssp HHHHTTCSEEEESCHHHHHHHHTT-TCC-SEEECCCGGGCCCCC---SCCC-CSSCEEEEEEE--CGGGHHHHHHHHHHH
T ss_pred HHHHHhCCEEEECCHHHHHHHHHc-CCC-eEEEcCCCccCCCcC---hhhh-hcCCEEEEEeC--CCchHHHHHHHHHHH
Confidence 345678999999999999999885 555 888998873 22111 1111 12367777775 468999999999999
Q ss_pred HHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCC--------CcEEEccCCCHHHHHHHHhhccEEEee--ch
Q 016925 295 LRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD--------GNVEFYKNLLYRSVLTIFMHLFVFTMK--WQ 364 (380)
Q Consensus 295 ~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~--------~~V~f~G~v~~~el~~ly~~a~vf~~~--~~ 364 (380)
.++. |+++|+|+|+++. ..++++++++++|+. ++|.|.|.. +|+..+|+.||+++++ +.
T Consensus 220 ~~~~----p~~~lvivG~g~~-----~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~ 288 (374)
T 2xci_A 220 KKTY----SSLKLILVPRHIE-----NAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFV 288 (374)
T ss_dssp HTTC----TTCEEEEEESSGG-----GHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSS
T ss_pred HhhC----CCcEEEEECCCHH-----HHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCccc
Confidence 7654 8999999998642 235899999999997 579999875 4899999999997764 33
Q ss_pred hhHH
Q 016925 365 LVYD 368 (380)
Q Consensus 365 ~~~~ 368 (380)
|.||
T Consensus 289 e~gg 292 (374)
T 2xci_A 289 NIGG 292 (374)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 5444
No 22
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.53 E-value=7.8e-13 Score=127.34 Aligned_cols=132 Identities=11% Similarity=0.037 Sum_probs=96.8
Q ss_pred hcCCCEEEEcCHHHHHHHHHHhCC-CCceEEecCCC-CCCCCCC----CCCCCCCCCCEEEEEecCCCccChHHHHHHHH
Q 016925 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQV----LPLERSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (380)
Q Consensus 219 ~~~ad~ii~~S~~~~~~i~~~~~~-~~k~~vi~~gv-d~~~~~~----~~~~~~~~~~~il~VGRl~p~K~~d~li~A~~ 292 (380)
.+.+|.++++|+..++.+.+. +. ++++.+++|++ |...+.. ....-..++..++++||+.++||++.+++|++
T Consensus 144 ~~~~~~~~~~s~~~~~~l~~~-g~~~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~k~~~~ll~a~~ 222 (376)
T 1v4v_A 144 DVLTDLDFAPTPLAKANLLKE-GKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALK 222 (376)
T ss_dssp HHHCSEEEESSHHHHHHHHTT-TCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHH
T ss_pred HHHhceeeCCCHHHHHHHHHc-CCCcceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccchHHHHHHHHHHH
Confidence 356899999999999998874 44 46788888864 4211100 00000112345678999999999999999999
Q ss_pred HHHHHccCCCCCCeEEEE-cCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeec
Q 016925 293 VALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKW 363 (380)
Q Consensus 293 ~l~~~~~~~~~~~~LvIv-G~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~ 363 (380)
.+.++. |+++++++ |++ .+..++++++++. .++|.|+|.++..++.++|+.||+|+.+.
T Consensus 223 ~l~~~~----~~~~lv~~~g~~-----~~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~~v~~S 282 (376)
T 1v4v_A 223 RVAEAF----PHLTFVYPVHLN-----PVVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLLLVTDS 282 (376)
T ss_dssp HHHHHC----TTSEEEEECCSC-----HHHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEEEEESC
T ss_pred HHHhhC----CCeEEEEECCCC-----HHHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcEEEECC
Confidence 997764 78999886 643 2345677777642 46899999998889999999999999876
No 23
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.50 E-value=1.4e-13 Score=137.70 Aligned_cols=132 Identities=14% Similarity=0.096 Sum_probs=95.6
Q ss_pred CceEEecCCCCCCCCCCC---CCC--------CCCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcC
Q 016925 244 DRIKRVYPPCDTSGLQVL---PLE--------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGS 312 (380)
Q Consensus 244 ~k~~vi~~gvd~~~~~~~---~~~--------~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~ 312 (380)
.++.+++||+|++.|.+. +.. .-.++++|++|||+++.||++.+|+||+.+.+++++...+++|+++|+
T Consensus 219 ~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~ 298 (482)
T 1uqt_A 219 FRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (482)
T ss_dssp EEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECC
T ss_pred EEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEEC
Confidence 478899999998766431 100 002468999999999999999999999999887621112467999997
Q ss_pred CCCCCC---HHHHHHHHHHHHhcC----CC--CcEE-EccCCCHHHHHHHHhhccEEEe-echhhHHHHHHHHH
Q 016925 313 CRNKSD---EERLQSLKDKSIELK----VD--GNVE-FYKNLLYRSVLTIFMHLFVFTM-KWQLVYDEFLKLYL 375 (380)
Q Consensus 313 g~~~~~---~~~~~~L~~la~~lg----l~--~~V~-f~G~v~~~el~~ly~~a~vf~~-~~~~~~~~~~~~~~ 375 (380)
+..... .++.+++++++.+++ .. ..|+ |.|.++++|+..+|+.||+|++ +.+|.||-=.+-|+
T Consensus 299 p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAm 372 (482)
T 1uqt_A 299 TSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYV 372 (482)
T ss_dssp BCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHH
Confidence 532111 234566777776643 22 2466 5799999999999999999986 88999997777665
No 24
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.42 E-value=3.3e-12 Score=127.16 Aligned_cols=155 Identities=8% Similarity=-0.047 Sum_probs=107.2
Q ss_pred cCCCEEEEcCHHHHHHHH----HHh-CC--------------CCceEEecCCCCCCCCCCCCCC--C-----CCCCCEEE
Q 016925 220 SCADLAMVNSSWTQSHIE----KLW-GI--------------PDRIKRVYPPCDTSGLQVLPLE--R-----STEYPAII 273 (380)
Q Consensus 220 ~~ad~ii~~S~~~~~~i~----~~~-~~--------------~~k~~vi~~gvd~~~~~~~~~~--~-----~~~~~~il 273 (380)
-.||.|...+..-++.+. +.. +. ..++.++++|+|++.|.+...+ . -.++++|+
T Consensus 206 l~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~~~~lIl 285 (496)
T 3t5t_A 206 LPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHRLVV 285 (496)
T ss_dssp TTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHTTSEEEE
T ss_pred HhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhCCceEEE
Confidence 478999998875554422 233 21 1266789999999888754211 0 02468999
Q ss_pred EEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCC---CHHHHHHHHHHHHhcCCC---CcEEEccCCCHH
Q 016925 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS---DEERLQSLKDKSIELKVD---GNVEFYKNLLYR 347 (380)
Q Consensus 274 ~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~---~~~~~~~L~~la~~lgl~---~~V~f~G~v~~~ 347 (380)
+|||+++.||++.+|+|| ++.+++++-. ++.|+++|.+.... ..++.+++++++.+++.. ..|.|+|.++.+
T Consensus 286 ~VgRLd~~KGi~~lL~Af-~ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~ 363 (496)
T 3t5t_A 286 HSGRTDPIKNAERAVRAF-VLAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVN 363 (496)
T ss_dssp EEEESSGGGCHHHHHHHH-HHHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHH
T ss_pred EcccCccccCHHHHHHHH-HHHHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHH
Confidence 999999999999999999 8888762111 34588887543211 234455677776665421 179999999999
Q ss_pred HHHHHHhhccEEEe-echhhHHHHHHHHHh
Q 016925 348 SVLTIFMHLFVFTM-KWQLVYDEFLKLYLQ 376 (380)
Q Consensus 348 el~~ly~~a~vf~~-~~~~~~~~~~~~~~~ 376 (380)
++..+|+.||+|++ +.+|.||-=.+-|+-
T Consensus 364 el~aly~~ADv~vv~SlrEGfgLv~~EamA 393 (496)
T 3t5t_A 364 HTIACFRRADLLIFNSTVDGQNLSTFEAPL 393 (496)
T ss_dssp HHHHHHHHCSEEEECCSSBSCCSHHHHHHH
T ss_pred HHHHHHHhccEEEECcccccCChhHHHHHH
Confidence 99999999999987 788999976666653
No 25
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.34 E-value=9.1e-12 Score=108.96 Aligned_cols=113 Identities=13% Similarity=0.071 Sum_probs=89.6
Q ss_pred ecCCCCCCCCC--CCCC------C------CCCCCCEEEEEecCC-CccChHHHHHHHHHHH--HHccCCCCCCeEEEEc
Q 016925 249 VYPPCDTSGLQ--VLPL------E------RSTEYPAIISVAQFR-PEKAHPLQLEAFSVAL--RKLDADLPRPRLQFVG 311 (380)
Q Consensus 249 i~~gvd~~~~~--~~~~------~------~~~~~~~il~VGRl~-p~K~~d~li~A~~~l~--~~~~~~~~~~~LvIvG 311 (380)
||||+|.+.|. +... . ..+++++|+++||+. +.||++.+++|++.+. ++. |+++|+|+|
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~----~~~~l~i~G 77 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF----QEMRFIIIG 77 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG----GGEEEEEEC
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccC----CCeEEEEEC
Confidence 68999998887 5431 0 012456999999999 9999999999999996 554 899999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCcEEE-ccCCCHHHHHHHHhhccEEEe-echhhHHHHHH
Q 016925 312 SCRNKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRSVLTIFMHLFVFTM-KWQLVYDEFLK 372 (380)
Q Consensus 312 ~g~~~~~~~~~~~L~~la~~lgl~~~V~f-~G~v~~~el~~ly~~a~vf~~-~~~~~~~~~~~ 372 (380)
.+. .++.+++++++++++ +|+| +|+++++++..+|+.||++++ +..|.||-=+-
T Consensus 78 ~~~----~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~ 133 (200)
T 2bfw_A 78 KGD----PELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVAL 133 (200)
T ss_dssp CBC----HHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHH
T ss_pred CCC----hHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHH
Confidence 863 245688999999987 8999 999999999999999999987 44677775433
No 26
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.30 E-value=3.3e-12 Score=108.50 Aligned_cols=89 Identities=17% Similarity=0.110 Sum_probs=77.3
Q ss_pred CCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016925 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRS 348 (380)
Q Consensus 269 ~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~e 348 (380)
++.|+++||+.++||++.+++|+..+.+. ++++|+|+|+|+. .++++++++++++ +|.| |++++++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-----~~~~l~i~G~g~~------~~~~~~~~~~~~~--~v~~-g~~~~~~ 67 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYK-----QDIVLLLKGKGPD------EKKIKLLAQKLGV--KAEF-GFVNSNE 67 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTG-----GGEEEEEECCSTT------HHHHHHHHHHHTC--EEEC-CCCCHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccC-----CCeEEEEEeCCcc------HHHHHHHHHHcCC--eEEE-eecCHHH
Confidence 46899999999999999999999998432 8999999998742 4789999999998 8999 9999999
Q ss_pred HHHHHhhccEEEe-echhhHHHHH
Q 016925 349 VLTIFMHLFVFTM-KWQLVYDEFL 371 (380)
Q Consensus 349 l~~ly~~a~vf~~-~~~~~~~~~~ 371 (380)
+.++|+.||++++ +..|.||-=+
T Consensus 68 ~~~~~~~adv~v~ps~~e~~~~~~ 91 (166)
T 3qhp_A 68 LLEILKTCTLYVHAANVESEAIAC 91 (166)
T ss_dssp HHHHHTTCSEEEECCCSCCCCHHH
T ss_pred HHHHHHhCCEEEECCcccCccHHH
Confidence 9999999999997 5578887533
No 27
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.29 E-value=6.2e-12 Score=108.52 Aligned_cols=91 Identities=18% Similarity=0.122 Sum_probs=79.3
Q ss_pred CCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHH--hcCCCCcEEEccCC
Q 016925 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI--ELKVDGNVEFYKNL 344 (380)
Q Consensus 267 ~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~--~lgl~~~V~f~G~v 344 (380)
.++++|+|+||+.+.||++.+++|++.+ ++++|+|+|++... ++++++++ +++++++|.|+|++
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--------~~~~l~i~G~~~~~------~~l~~~~~~~~~~l~~~v~~~g~~ 86 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--------QDEKLYIVGWFSKG------DHAERYARKIMKIAPDNVKFLGSV 86 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--------TTSCEEEEBCCCTT------STHHHHHHHHHHHSCTTEEEEESC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--------CCcEEEEEecCccH------HHHHHHHHhhhcccCCcEEEeCCC
Confidence 3568999999999999999999999976 68999999987532 46788888 88999999999999
Q ss_pred CHHHHHHHHhhccEEEe-echhhHHHHH
Q 016925 345 LYRSVLTIFMHLFVFTM-KWQLVYDEFL 371 (380)
Q Consensus 345 ~~~el~~ly~~a~vf~~-~~~~~~~~~~ 371 (380)
+++++..+|+.||++++ +..|.||-=+
T Consensus 87 ~~~e~~~~~~~adi~v~ps~~e~~~~~~ 114 (177)
T 2f9f_A 87 SEEELIDLYSRCKGLLCTAKDEDFGLTP 114 (177)
T ss_dssp CHHHHHHHHHHCSEEEECCSSCCSCHHH
T ss_pred CHHHHHHHHHhCCEEEeCCCcCCCChHH
Confidence 99999999999999998 6678887433
No 28
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.28 E-value=2.2e-11 Score=124.09 Aligned_cols=100 Identities=11% Similarity=0.026 Sum_probs=73.0
Q ss_pred HHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCCC------------------------CCCC-C
Q 016925 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP------------------------LERS-T 267 (380)
Q Consensus 213 ~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~~------------------------~~~~-~ 267 (380)
.+++.....||.|+|+|+.++++++.+++.+.+. +|+||+|.+.|.+.. ..-. +
T Consensus 252 ~~EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~-iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d 330 (725)
T 3nb0_A 252 CIERAAAHSADVFTTVSQITAFEAEHLLKRKPDG-ILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLD 330 (725)
T ss_dssp HHHHHHHHHSSEEEESSHHHHHHHHHHTSSCCSE-ECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHHHhcCCCCE-EEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence 4567778899999999999999999988764443 499999998886530 0111 1
Q ss_pred CCCEEEEEecCC-CccChHHHHHHHHHHHHHc---cCCCCCCeEEEEcCC
Q 016925 268 EYPAIISVAQFR-PEKAHPLQLEAFSVALRKL---DADLPRPRLQFVGSC 313 (380)
Q Consensus 268 ~~~~il~VGRl~-p~K~~d~li~A~~~l~~~~---~~~~~~~~LvIvG~g 313 (380)
+.+++..+||++ ++||+|.+++|++++.... ....+-+.|+|+..+
T Consensus 331 k~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~ 380 (725)
T 3nb0_A 331 NTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAK 380 (725)
T ss_dssp GEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCC
T ss_pred ceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCC
Confidence 234556689999 7899999999999987542 112245677888765
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.18 E-value=1.5e-09 Score=105.87 Aligned_cols=272 Identities=11% Similarity=0.015 Sum_probs=150.9
Q ss_pred cCCCCcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEE-EEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccc
Q 016925 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCI-VYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (380)
Q Consensus 30 ~~~~~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~-v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~ 108 (380)
.++++|||+++.-.- + |. .-+..++++|++. +++++. +.|+.+. + ...+.-+.||++.. +.+...
T Consensus 21 ~~~~m~ki~~v~Gtr--~-~~-~~~a~li~~l~~~-~~~~~~~~~tG~h~---~-~~~~~~~~~~i~~~-----~~l~~~ 86 (396)
T 3dzc_A 21 QSNAMKKVLIVFGTR--P-EA-IKMAPLVQQLCQD-NRFVAKVCVTGQHR---E-MLDQVLELFSITPD-----FDLNIM 86 (396)
T ss_dssp ---CCEEEEEEECSH--H-HH-HHHHHHHHHHHHC-TTEEEEEEECCSSS---H-HHHHHHHHTTCCCS-----EECCCC
T ss_pred HhCCCCeEEEEEecc--H-hH-HHHHHHHHHHHhC-CCCcEEEEEecccH---H-HHHHHHHhcCCCCc-----eeeecC
Confidence 457788999987644 2 33 3346788899876 347764 5665541 1 12222234666321 222210
Q ss_pred cccccCCCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhHH--H-HhHhCCcEEEEEeCCcchhhHHHhhhccc
Q 016925 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGS 185 (380)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~--l-~~~~~~p~v~~~H~p~~~~~~~~~~~~~~ 185 (380)
. ..-. ........+....+.+++.+||+++....+..+++ + ++..++|++ +++.+...
T Consensus 87 ~----~~~~---~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~-h~~ag~rs----------- 147 (396)
T 3dzc_A 87 E----PGQT---LNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVG-HVEAGLRT----------- 147 (396)
T ss_dssp C----TTCC---HHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEE-EETCCCCC-----------
T ss_pred C----CCCC---HHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEE-EEECCccc-----------
Confidence 0 0000 11111111223345678899997765444333333 2 345689965 33332211
Q ss_pred cccCCCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCC-CCceEEecCCC-CCCCCCCC--
Q 016925 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL-- 261 (380)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~-~~k~~vi~~gv-d~~~~~~~-- 261 (380)
+.. .+ .+... ..+ ..+.+.+|.+++.|+..++.+.+. |. ++++.++.|++ |...+.+.
T Consensus 148 --~~~-----~~---~~~~~----~~r---~~~~~~a~~~~~~se~~~~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~ 209 (396)
T 3dzc_A 148 --GNI-----YS---PWPEE----GNR---KLTAALTQYHFAPTDTSRANLLQE-NYNAENIFVTGNTVIDALLAVREKI 209 (396)
T ss_dssp --SCT-----TS---STTHH----HHH---HHHHHTCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHH
T ss_pred --ccc-----cc---CCcHH----HHH---HHHHHhcCEEECCCHHHHHHHHHc-CCCcCcEEEECCcHHHHHHHhhhhc
Confidence 100 00 00011 111 122457899999999999998874 54 46788888754 42111100
Q ss_pred ------------CCC-CCCCCCEE-EEEecCC-CccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHH
Q 016925 262 ------------PLE-RSTEYPAI-ISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLK 326 (380)
Q Consensus 262 ------------~~~-~~~~~~~i-l~VGRl~-p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~ 326 (380)
... -.++++++ ++.+|.. ..|+++.+++|++.+.+++ |++++++.++. +....+.++
T Consensus 210 ~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~----~~~~~v~~~g~----~~~~~~~l~ 281 (396)
T 3dzc_A 210 HTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQH----PECQILYPVHL----NPNVREPVN 281 (396)
T ss_dssp HHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHC----TTEEEEEECCB----CHHHHHHHH
T ss_pred ccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhC----CCceEEEEeCC----ChHHHHHHH
Confidence 011 01234554 4565754 4588999999999998765 89999886421 122344444
Q ss_pred HHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeec
Q 016925 327 DKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKW 363 (380)
Q Consensus 327 ~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~ 363 (380)
++ ++..++|.|.++++..++..+|+.||+++.+.
T Consensus 282 ~~---~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S 315 (396)
T 3dzc_A 282 KL---LKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS 315 (396)
T ss_dssp HH---TTTCTTEEEECCCCHHHHHHHHHHCSEEEESC
T ss_pred HH---HcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC
Confidence 43 35567999999999889999999999998754
No 30
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.13 E-value=5.5e-09 Score=101.44 Aligned_cols=267 Identities=12% Similarity=-0.011 Sum_probs=138.7
Q ss_pred CCCCcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccc--
Q 016925 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR-- 108 (380)
Q Consensus 31 ~~~~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~-- 108 (380)
.+.+|||+|+.+. ++|....+..++++|+++| |+|.+++... . . +... ..|+ +++.++..
T Consensus 17 ~~~~MrIl~~~~~---~~Gh~~~~~~la~~L~~~G--heV~v~~~~~-~--~---~~~~-~~g~------~~~~~~~~~~ 78 (412)
T 3otg_A 17 EGRHMRVLFASLG---THGHTYPLLPLATAARAAG--HEVTFATGEG-F--A---GTLR-KLGF------EPVATGMPVF 78 (412)
T ss_dssp -CCSCEEEEECCS---SHHHHGGGHHHHHHHHHTT--CEEEEEECGG-G--H---HHHH-HTTC------EEEECCCCHH
T ss_pred ccceeEEEEEcCC---CcccHHHHHHHHHHHHHCC--CEEEEEccHH-H--H---HHHH-hcCC------ceeecCcccc
Confidence 4567999999854 3677777889999999998 8888887542 1 1 1111 1233 34444310
Q ss_pred -cc-------cccCCCC------ccceehhhHhHH------HHHHHHHHhcCCcEEEeCCCchhhHHHHhHhCCcEEEEE
Q 016925 109 -KW-------IEESTYP------RFTMIGQSFGSV------YLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYT 168 (380)
Q Consensus 109 -~~-------~~~~~~~------~~~~~~~~~~~~------~~~~~~l~~~~pDi~~~~~~~~~~~~l~~~~~~p~v~~~ 168 (380)
.+ ......+ ........+... ....+.+++++||++++..........++..++|.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~ 158 (412)
T 3otg_A 79 DGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHG 158 (412)
T ss_dssp HHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEEC
T ss_pred cchhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEec
Confidence 00 0000000 000001111111 222345778899976644332222224556799999887
Q ss_pred eCCcchhhHHHhhhccccccCCCccccccchhhhhHHHHHHHHH-HHHHHH--------hcCCCEEEEcCHHHHHHHHHH
Q 016925 169 HYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMYGLV--------GSCADLAMVNSSWTQSHIEKL 239 (380)
Q Consensus 169 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~--------~~~ad~ii~~S~~~~~~i~~~ 239 (380)
|.+...... .. . .+..+. .+.+.. ...+|.+++.+....+...+.
T Consensus 159 ~~~~~~~~~----------------------~~---~-~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 212 (412)
T 3otg_A 159 VGRDTPDDL----------------------TR---S-IEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFR 212 (412)
T ss_dssp CSCCCCSHH----------------------HH---H-HHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHH
T ss_pred ccccCchhh----------------------hH---H-HHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCccc
Confidence 754321000 00 0 111111 111211 135788888876665544433
Q ss_pred hCCCCceEEecCCCCCCC-CCCC-CCCCCCCCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCC
Q 016925 240 WGIPDRIKRVYPPCDTSG-LQVL-PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS 317 (380)
Q Consensus 240 ~~~~~k~~vi~~gvd~~~-~~~~-~~~~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~ 317 (380)
... ....+.+.+.+... .... ......+...++++|++. .|+.+.+.+++..+.+ .++++++++++...
T Consensus 213 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~------~~~~~~~~~g~~~~- 283 (412)
T 3otg_A 213 ARP-RRHELRPVPFAEQGDLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG------LDADVLVASGPSLD- 283 (412)
T ss_dssp TCT-TEEECCCCCCCCCCCCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT------SSSEEEEECCSSCC-
T ss_pred CCC-CcceeeccCCCCCCCCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc------CCCEEEEEECCCCC-
Confidence 322 11112222222111 1111 011112234668889996 7888888887777743 36777777765320
Q ss_pred CHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeec
Q 016925 318 DEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKW 363 (380)
Q Consensus 318 ~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~ 363 (380)
.++++ ++.++|.|.|+++ +.++|+.||+|+...
T Consensus 284 ----~~~l~------~~~~~v~~~~~~~---~~~~l~~ad~~v~~~ 316 (412)
T 3otg_A 284 ----VSGLG------EVPANVRLESWVP---QAALLPHVDLVVHHG 316 (412)
T ss_dssp ----CTTCC------CCCTTEEEESCCC---HHHHGGGCSEEEESC
T ss_pred ----hhhhc------cCCCcEEEeCCCC---HHHHHhcCcEEEECC
Confidence 12222 3678999999984 889999999999754
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.11 E-value=1.7e-08 Score=97.14 Aligned_cols=250 Identities=11% Similarity=0.080 Sum_probs=135.7
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccccccccC
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~~~~~~~ 114 (380)
+||.+..- + .||--.-++.++++|+++| |+|..++..... | .+.....|++ +..++...+....
T Consensus 3 ~~i~i~~G--G-TgGHi~palala~~L~~~g--~~V~~vg~~~g~--e---~~~v~~~g~~------~~~i~~~~~~~~~ 66 (365)
T 3s2u_A 3 GNVLIMAG--G-TGGHVFPALACAREFQARG--YAVHWLGTPRGI--E---NDLVPKAGLP------LHLIQVSGLRGKG 66 (365)
T ss_dssp CEEEEECC--S-SHHHHHHHHHHHHHHHHTT--CEEEEEECSSST--H---HHHTGGGTCC------EEECC--------
T ss_pred CcEEEEcC--C-CHHHHHHHHHHHHHHHhCC--CEEEEEECCchH--h---hchhhhcCCc------EEEEECCCcCCCC
Confidence 56776422 1 1343334789999999998 777767644321 1 1111123443 2333221110001
Q ss_pred CCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhHH--H-HhHhCCcEEEEEeCCcchhhHHHhhhccccccCCC
Q 016925 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (380)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~--l-~~~~~~p~v~~~H~p~~~~~~~~~~~~~~~~~~~~ 191 (380)
.+..+....+.+..+..+.+.+++++||+++...++.. .| + ++..++|++. |..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s-~p~~laA~~~~iP~vi--he~n~~----------------- 126 (365)
T 3s2u_A 67 LKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVT-GPGGLAARLNGVPLVI--HEQNAV----------------- 126 (365)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTH-HHHHHHHHHTTCCEEE--EECSSS-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcch-HHHHHHHHHcCCCEEE--Eecchh-----------------
Confidence 11112222333344445566789999998887766543 33 2 4567899874 422110
Q ss_pred ccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCCC--CCCCCCC
Q 016925 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP--LERSTEY 269 (380)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~~--~~~~~~~ 269 (380)
.+. ..+++.+.+|.+.+.... .+...++..++.|++..+.+.... .....++
T Consensus 127 --------~G~-----------~nr~l~~~a~~v~~~~~~-------~~~~~~k~~~~g~pvr~~~~~~~~~~~~~~~~~ 180 (365)
T 3s2u_A 127 --------AGT-----------ANRSLAPIARRVCEAFPD-------TFPASDKRLTTGNPVRGELFLDAHARAPLTGRR 180 (365)
T ss_dssp --------CCH-----------HHHHHGGGCSEEEESSTT-------SSCC---CEECCCCCCGGGCCCTTSSCCCTTSC
T ss_pred --------hhh-----------HHHhhccccceeeecccc-------cccCcCcEEEECCCCchhhccchhhhcccCCCC
Confidence 010 113445678988876432 233335666777777644332211 1111234
Q ss_pred C-EEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEE-cCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016925 270 P-AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (380)
Q Consensus 270 ~-~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIv-G~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~ 347 (380)
+ .+++-|.+...+.-+.+++|++.+... .+..++.. |.+ ..+.+++..++++. ++.+.|+++
T Consensus 181 ~~ilv~gGs~g~~~~~~~~~~al~~l~~~-----~~~~vi~~~G~~-------~~~~~~~~~~~~~~--~~~v~~f~~-- 244 (365)
T 3s2u_A 181 VNLLVLGGSLGAEPLNKLLPEALAQVPLE-----IRPAIRHQAGRQ-------HAEITAERYRTVAV--EADVAPFIS-- 244 (365)
T ss_dssp CEEEECCTTTTCSHHHHHHHHHHHTSCTT-----TCCEEEEECCTT-------THHHHHHHHHHTTC--CCEEESCCS--
T ss_pred cEEEEECCcCCccccchhhHHHHHhcccc-----cceEEEEecCcc-------ccccccceeccccc--ccccccchh--
Confidence 4 455567888888888888998877433 35555443 432 13566777777665 466779986
Q ss_pred HHHHHHhhccEEEee
Q 016925 348 SVLTIFMHLFVFTMK 362 (380)
Q Consensus 348 el~~ly~~a~vf~~~ 362 (380)
+++++|+.||+++..
T Consensus 245 dm~~~l~~aDlvI~r 259 (365)
T 3s2u_A 245 DMAAAYAWADLVICR 259 (365)
T ss_dssp CHHHHHHHCSEEEEC
T ss_pred hhhhhhccceEEEec
Confidence 799999999999863
No 32
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.05 E-value=2.5e-09 Score=102.07 Aligned_cols=123 Identities=11% Similarity=-0.113 Sum_probs=86.3
Q ss_pred HHHHHhcCCCEEEEcCHHHHHHHHHHhCCC-CceEEecCCC-CCCCCCCCCCCCCCCCCEEEEEecCCCccChHHHHHHH
Q 016925 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAF 291 (380)
Q Consensus 214 l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~-~k~~vi~~gv-d~~~~~~~~~~~~~~~~~il~VGRl~p~K~~d~li~A~ 291 (380)
.|+.+.+.||.||++|+.+++.+.+. +.+ .++ ++.+. |.. .+.+.....+++.++|+||+.....++ .
T Consensus 126 ~E~~~y~~aD~Ii~~S~~~~~~l~~~-G~~~~ki--~~~~~~~~~--~~~~~~~~~~~~~i~yaG~l~k~~~L~----~- 195 (339)
T 3rhz_A 126 RTIAYYNKADVVVAPSQKMIDKLRDF-GMNVSKT--VVQGMWDHP--TQAPMFPAGLKREIHFPGNPERFSFVK----E- 195 (339)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHHT-TCCCSEE--EECCSCCCC--CCCCCCCCEEEEEEEECSCTTTCGGGG----G-
T ss_pred HHHHHHHHCCEEEECCHHHHHHHHHc-CCCcCce--eecCCCCcc--CcccccccCCCcEEEEeCCcchhhHHH----h-
Confidence 57788899999999999999999885 443 444 33333 211 111111112347899999999532221 1
Q ss_pred HHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeechhhHHHHH
Q 016925 292 SVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFL 371 (380)
Q Consensus 292 ~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~~~~~~~~~ 371 (380)
+ .++++|+|+|+|+.. +++ +|+|+|.+|++|++.+|+++++.+....+.||+|+
T Consensus 196 --l-------~~~~~f~ivG~G~~~----------------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~ 249 (339)
T 3rhz_A 196 --W-------KYDIPLKVYTWQNVE----------------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQ 249 (339)
T ss_dssp --C-------CCSSCEEEEESCCCC----------------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHH
T ss_pred --C-------CCCCeEEEEeCCccc----------------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHH
Confidence 1 179999999998531 245 89999999999999999988887765667799886
Q ss_pred H
Q 016925 372 K 372 (380)
Q Consensus 372 ~ 372 (380)
+
T Consensus 250 ~ 250 (339)
T 3rhz_A 250 S 250 (339)
T ss_dssp T
T ss_pred H
Confidence 4
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.04 E-value=6.5e-09 Score=101.56 Aligned_cols=270 Identities=10% Similarity=0.011 Sum_probs=146.7
Q ss_pred CcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEE-EEcCCCCCChhhHHHHHHhhcCccccCCCeEEEeccccccc
Q 016925 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCI-VYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (380)
Q Consensus 34 ~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~-v~t~~~~~~~~~~~~~~~~~~g~~l~~~v~~v~l~~~~~~~ 112 (380)
+|||+++.-.- + |.-. +..++++|++.+.++++. +.|+.+. . ...+.-+.||+... +.+....
T Consensus 27 ~~kI~~v~Gtr--~-~~~~-~a~li~~l~~~~~~~~~~~~~tG~h~-~---m~~~~~~~~~i~~~-----~~l~v~~--- 90 (403)
T 3ot5_A 27 KIKVMSIFGTR--P-EAIK-MAPLVLALEKEPETFESTVVITAQHR-E---MLDQVLEIFDIKPD-----IDLDIMK--- 90 (403)
T ss_dssp CEEEEEEECSH--H-HHHH-HHHHHHHHHTCTTTEEEEEEECC---------CHHHHHHTTCCCS-----EECCCCC---
T ss_pred cceEEEEEecC--h-hHHH-HHHHHHHHHhCCCCCcEEEEEecCcH-H---HHHHHHHhcCCCCC-----cccccCC---
Confidence 46899887644 1 3323 467889998762147754 5566431 1 11111233666321 2221100
Q ss_pred cCCCCccceehhhHhHHHHHHHHHHhcCCcEEEeCCCchhhHH---HHhHhCCcEEEEEeCCcchhhHHHhhhccccccC
Q 016925 113 ESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (380)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDi~~~~~~~~~~~~---l~~~~~~p~v~~~H~p~~~~~~~~~~~~~~~~~~ 189 (380)
.+ -. ........+....+.+++.+||+++.......+++ .++..++|++ +++.+... +.
T Consensus 91 ~~-~~---~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs-------------~~ 152 (403)
T 3ot5_A 91 KG-QT---LAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRT-------------WN 152 (403)
T ss_dssp -C-CC---HHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCC-------------SC
T ss_pred CC-CC---HHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEE-EEECCccc-------------cc
Confidence 00 00 01111111223345678999997664443333333 2345689964 34432211 10
Q ss_pred CCccccccchhhhhHHHHHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCC-CCCCCCCCCCC--CC-
Q 016925 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP-CDTSGLQVLPL--ER- 265 (380)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~g-vd~~~~~~~~~--~~- 265 (380)
. .. .+.....+ +.+.+.+|.+++.|+..++.+.+..-.++++.++.|+ +|...+..... ..
T Consensus 153 ~-----~~---~~p~~~~r-------~~~~~~a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~ 217 (403)
T 3ot5_A 153 K-----YS---PFPEEMNR-------QLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPI 217 (403)
T ss_dssp T-----TS---STTHHHHH-------HHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHH
T ss_pred c-----cc---CCcHHHHH-------HHHHHhcCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcchHH
Confidence 0 00 00011111 1223458999999999999988853324678888775 34211111100 00
Q ss_pred ---CCCCC-EEEEEecCCC-ccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEE
Q 016925 266 ---STEYP-AIISVAQFRP-EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF 340 (380)
Q Consensus 266 ---~~~~~-~il~VGRl~p-~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f 340 (380)
-.+++ .++++||.+. .|+++.+++|+..+.+++ |++++++.++. +....+.+++. ++..++|.+
T Consensus 218 ~~~l~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~----~~~~~v~~~~~----~~~~~~~l~~~---~~~~~~v~l 286 (403)
T 3ot5_A 218 LENLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESR----EDTELVYPMHL----NPAVREKAMAI---LGGHERIHL 286 (403)
T ss_dssp HHSCTTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHC----TTEEEEEECCS----CHHHHHHHHHH---HTTCTTEEE
T ss_pred HHhccCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhC----CCceEEEecCC----CHHHHHHHHHH---hCCCCCEEE
Confidence 01234 4566778754 478999999999998765 89999987532 12223344433 355579999
Q ss_pred ccCCCHHHHHHHHhhccEEEeec
Q 016925 341 YKNLLYRSVLTIFMHLFVFTMKW 363 (380)
Q Consensus 341 ~G~v~~~el~~ly~~a~vf~~~~ 363 (380)
.|+++..++..+|+.||+++...
T Consensus 287 ~~~l~~~~~~~l~~~ad~vv~~S 309 (403)
T 3ot5_A 287 IEPLDAIDFHNFLRKSYLVFTDS 309 (403)
T ss_dssp ECCCCHHHHHHHHHHEEEEEECC
T ss_pred eCCCCHHHHHHHHHhcCEEEECC
Confidence 99999999999999999988654
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=98.71 E-value=1.3e-06 Score=85.26 Aligned_cols=119 Identities=13% Similarity=0.006 Sum_probs=63.5
Q ss_pred CCCEEEEcCHHHHHHHHHHhCCCCc-eEEecCCCCCCCC-CCCCCCCCCCCCEEEEEecCCCccChHHHHHHHHHHHHHc
Q 016925 221 CADLAMVNSSWTQSHIEKLWGIPDR-IKRVYPPCDTSGL-QVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKL 298 (380)
Q Consensus 221 ~ad~ii~~S~~~~~~i~~~~~~~~k-~~vi~~gvd~~~~-~~~~~~~~~~~~~il~VGRl~p~K~~d~li~A~~~l~~~~ 298 (380)
.+|.++++|....+...+.++ .+ +..+-|+++.... .........+...++++|++. .++.+.+.+++..+ ++
T Consensus 185 ~~~~~l~~~~~~~~~~~~~~~--~~~v~~vG~~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l-~~- 259 (430)
T 2iyf_A 185 HPPRSLVLIPKALQPHADRVD--EDVYTFVGACQGDRAEEGGWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAF-GN- 259 (430)
T ss_dssp CCSSEEECSCGGGSTTGGGSC--TTTEEECCCCC-----CCCCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHH-TT-
T ss_pred CCCcEEEeCcHHhCCCcccCC--CccEEEeCCcCCCCCCCCCCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHH-hc-
Confidence 578899987654332212222 24 4444443432110 011111112235788999998 55555544444444 22
Q ss_pred cCCCCCCeE-EEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEee
Q 016925 299 DADLPRPRL-QFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMK 362 (380)
Q Consensus 299 ~~~~~~~~L-vIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~ 362 (380)
.+++++ +++|++.. .++++ .++++|.|.|++++. ++|+.||+|+..
T Consensus 260 ---~~~~~~~~~~G~~~~------~~~l~------~~~~~v~~~~~~~~~---~~l~~ad~~v~~ 306 (430)
T 2iyf_A 260 ---LPGWHLVLQIGRKVT------PAELG------ELPDNVEVHDWVPQL---AILRQADLFVTH 306 (430)
T ss_dssp ---CTTEEEEEECC---C------GGGGC------SCCTTEEEESSCCHH---HHHTTCSEEEEC
T ss_pred ---CCCeEEEEEeCCCCC------hHHhc------cCCCCeEEEecCCHH---HHhhccCEEEEC
Confidence 157787 57887532 12222 357899999999854 789999999874
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.57 E-value=4.3e-07 Score=87.82 Aligned_cols=70 Identities=10% Similarity=-0.067 Sum_probs=39.6
Q ss_pred CCEEEEEecCCCccC----------hHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcE
Q 016925 269 YPAIISVAQFRPEKA----------HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV 338 (380)
Q Consensus 269 ~~~il~VGRl~p~K~----------~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V 338 (380)
...++++|++.+.|+ ++.+++|++. .+++++++|++.. .+.++ ++.++|
T Consensus 228 ~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~---------~~~~~v~~~~~~~------~~~l~------~~~~~v 286 (398)
T 4fzr_A 228 PRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK---------LGFEVVVAVSDKL------AQTLQ------PLPEGV 286 (398)
T ss_dssp CEEECC----------------CCSHHHHHHHGGG---------GTCEEEECCCC--------------------CCTTE
T ss_pred CEEEEEccCcccccccccccchHHHHHHHHHHHHh---------CCCEEEEEeCCcc------hhhhc------cCCCcE
Confidence 457788999986663 4444444432 2688999887531 23333 357899
Q ss_pred EEccCCCHHHHHHHHhhccEEEee
Q 016925 339 EFYKNLLYRSVLTIFMHLFVFTMK 362 (380)
Q Consensus 339 ~f~G~v~~~el~~ly~~a~vf~~~ 362 (380)
.+.|+++ ..++|+.||+|+..
T Consensus 287 ~~~~~~~---~~~ll~~ad~~v~~ 307 (398)
T 4fzr_A 287 LAAGQFP---LSAIMPACDVVVHH 307 (398)
T ss_dssp EEESCCC---HHHHGGGCSEEEEC
T ss_pred EEeCcCC---HHHHHhhCCEEEec
Confidence 9999986 67899999999963
No 36
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.55 E-value=5.4e-07 Score=86.74 Aligned_cols=73 Identities=11% Similarity=0.062 Sum_probs=54.3
Q ss_pred CCEEEEEecCCCccCh-HHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016925 269 YPAIISVAQFRPEKAH-PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (380)
Q Consensus 269 ~~~il~VGRl~p~K~~-d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~ 347 (380)
...++++|++.+.|+. ..+++++... ++. |+++++++|++.. .+.++ ++.++|.+.|+++..
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~----p~~~~v~~~~~~~------~~~l~------~~~~~v~~~~~~~~~ 281 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAA-TEL----PGVEAVIAVPPEH------RALLT------DLPDNARIAESVPLN 281 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHH-HTS----TTEEEEEECCGGG------GGGCT------TCCTTEEECCSCCGG
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHh-ccC----CCeEEEEEECCcc------hhhcc------cCCCCEEEeccCCHH
Confidence 3467778999887666 7888888777 653 7999999987531 12232 467899999999754
Q ss_pred HHHHHHhhccEEEe
Q 016925 348 SVLTIFMHLFVFTM 361 (380)
Q Consensus 348 el~~ly~~a~vf~~ 361 (380)
++++.||+|+.
T Consensus 282 ---~ll~~ad~~v~ 292 (391)
T 3tsa_A 282 ---LFLRTCELVIC 292 (391)
T ss_dssp ---GTGGGCSEEEE
T ss_pred ---HHHhhCCEEEe
Confidence 46799999996
No 37
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.53 E-value=8.8e-07 Score=85.68 Aligned_cols=72 Identities=8% Similarity=-0.078 Sum_probs=51.6
Q ss_pred CCEEEEEecCCCc-cChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016925 269 YPAIISVAQFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (380)
Q Consensus 269 ~~~il~VGRl~p~-K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~ 347 (380)
...++++|++... |+.+.+.+++..+.+ .+++++++|++... +.++ +++++|.+.|+++
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~------~~~~~v~~~g~~~~------~~l~------~~~~~v~~~~~~~-- 292 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGE------VDADFVLALGDLDI------SPLG------TLPRNVRAVGWTP-- 292 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHT------SSSEEEEECTTSCC------GGGC------SCCTTEEEESSCC--
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHc------CCCEEEEEECCcCh------hhhc------cCCCcEEEEccCC--
Confidence 4577889999766 466666666655533 47899999876421 2222 4678999999985
Q ss_pred HHHHHHhhccEEEe
Q 016925 348 SVLTIFMHLFVFTM 361 (380)
Q Consensus 348 el~~ly~~a~vf~~ 361 (380)
..++|+.||+|+.
T Consensus 293 -~~~ll~~ad~~v~ 305 (398)
T 3oti_A 293 -LHTLLRTCTAVVH 305 (398)
T ss_dssp -HHHHHTTCSEEEE
T ss_pred -HHHHHhhCCEEEE
Confidence 6678999999996
No 38
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.41 E-value=1e-05 Score=77.65 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=29.2
Q ss_pred CcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcC
Q 016925 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (380)
Q Consensus 34 ~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~ 75 (380)
++||+|+... +.|--.-+..++++|+++| |+|+++|+
T Consensus 4 M~~il~~~~~---~~Ghv~~~~~La~~L~~~G--heV~v~~~ 40 (402)
T 3ia7_A 4 QRHILFANVQ---GHGHVYPSLGLVSELARRG--HRITYVTT 40 (402)
T ss_dssp CCEEEEECCS---SHHHHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCEEEEEeCC---CCcccccHHHHHHHHHhCC--CEEEEEcC
Confidence 4599998763 2466677889999999999 88888874
No 39
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.35 E-value=2.4e-05 Score=75.68 Aligned_cols=40 Identities=8% Similarity=-0.026 Sum_probs=31.0
Q ss_pred CCCcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCC
Q 016925 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (380)
Q Consensus 32 ~~~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~ 76 (380)
.++|||+|+... +.|--.-+..++++|+++| |+|+++|+.
T Consensus 18 ~~m~rIl~~~~~---~~GHv~p~l~La~~L~~~G--h~V~v~~~~ 57 (415)
T 3rsc_A 18 RHMAHLLIVNVA---SHGLILPTLTVVTELVRRG--HRVSYVTAG 57 (415)
T ss_dssp -CCCEEEEECCS---CHHHHGGGHHHHHHHHHTT--CEEEEEECG
T ss_pred ccCCEEEEEeCC---CccccccHHHHHHHHHHCC--CEEEEEeCH
Confidence 457899998763 3566667889999999999 788888743
No 40
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.30 E-value=4.7e-05 Score=72.91 Aligned_cols=69 Identities=3% Similarity=-0.161 Sum_probs=48.8
Q ss_pred CCEEEEEecCCCc-------cChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEc
Q 016925 269 YPAIISVAQFRPE-------KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (380)
Q Consensus 269 ~~~il~VGRl~p~-------K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~ 341 (380)
...++++|++.+. |.++.+++|++. .++++++++++ ...++++. ++++|.+
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~---------~~~~~~~~~g~------~~~~~l~~------~~~~v~~- 268 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR---------WDVELIVAAPD------TVAEALRA------EVPQARV- 268 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT---------TTCEEEEECCH------HHHHHHHH------HCTTSEE-
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhc---------CCcEEEEEeCC------CCHHhhCC------CCCceEE-
Confidence 3478999999876 567777777653 36788887653 11233332 4688999
Q ss_pred cCCCHHHHHHHHhhccEEEee
Q 016925 342 KNLLYRSVLTIFMHLFVFTMK 362 (380)
Q Consensus 342 G~v~~~el~~ly~~a~vf~~~ 362 (380)
|+++. .++|++||+|+..
T Consensus 269 ~~~~~---~~~l~~~d~~v~~ 286 (384)
T 2p6p_A 269 GWTPL---DVVAPTCDLLVHH 286 (384)
T ss_dssp ECCCH---HHHGGGCSEEEEC
T ss_pred cCCCH---HHHHhhCCEEEeC
Confidence 99974 5689999999975
No 41
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.11 E-value=3e-05 Score=74.98 Aligned_cols=127 Identities=9% Similarity=0.062 Sum_probs=85.6
Q ss_pred cCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCC-CCCCCC-----C------CCCCCCCCCCEEEEEecCC---CccCh
Q 016925 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQ-----V------LPLERSTEYPAIISVAQFR---PEKAH 284 (380)
Q Consensus 220 ~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gv-d~~~~~-----~------~~~~~~~~~~~il~VGRl~---p~K~~ 284 (380)
+.+|.+++.|+..++.+.+..-.++++.++-|++ |...+. . .+.+ +++..+++.+|.+ +.|++
T Consensus 145 ~~a~~~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~--~~~~iLvt~hr~e~~~~~~~l 222 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLT--PKQYFLISSHREENVDVKNNL 222 (385)
T ss_dssp HHCSEEEESSHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCC--TTSEEEEEECCC-----CHHH
T ss_pred hhhceeecCCHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCC--cCCEEEEEeCCchhcCcHHHH
Confidence 4589999999999999887543246788887753 421110 0 1111 1223455666754 55889
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhc-C-C--CCcEEEccCCCHHHHHHHHhhccEEE
Q 016925 285 PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL-K-V--DGNVEFYKNLLYRSVLTIFMHLFVFT 360 (380)
Q Consensus 285 d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~l-g-l--~~~V~f~G~v~~~el~~ly~~a~vf~ 360 (380)
+.+++|+..+.+++ ++.+++... ..+++.+++. | + .++|.+.+.++..++..+|+.||+++
T Consensus 223 ~~ll~al~~l~~~~-----~~~vv~p~~----------p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvv 287 (385)
T 4hwg_A 223 KELLNSLQMLIKEY-----NFLIIFSTH----------PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCIL 287 (385)
T ss_dssp HHHHHHHHHHHHHH-----CCEEEEEEC----------HHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHhcC-----CeEEEEECC----------hHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEE
Confidence 99999999987642 677777653 1245555555 4 3 46899999999999999999999988
Q ss_pred eec
Q 016925 361 MKW 363 (380)
Q Consensus 361 ~~~ 363 (380)
...
T Consensus 288 t~S 290 (385)
T 4hwg_A 288 SDS 290 (385)
T ss_dssp ECC
T ss_pred ECC
Confidence 654
No 42
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.88 E-value=0.00079 Score=68.34 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=65.6
Q ss_pred EEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEE--EEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016925 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ--FVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRS 348 (380)
Q Consensus 271 ~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~Lv--IvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~e 348 (380)
.++|.+-=.+.|..+.++++|+++.++. |+..|+ ++|++.. . .+.+.+.+.++|++++|.|.|.++.++
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~v----P~s~L~l~~~g~~~g-~----~~~~~~~~~~~GI~~Rv~F~g~~p~~e 511 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRA----KVKVHFHFALGQSNG-I----THPYVERFIKSYLGDSATAHPHSPYHQ 511 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHC----SSEEEEEEEESSCCG-G----GHHHHHHHHHHHHGGGEEEECCCCHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhC----CCcEEEEEecCCCch-h----hHHHHHHHHHcCCCccEEEcCCCCHHH
Confidence 4444443346899999999999999875 887764 4674311 1 133444566789999999999999999
Q ss_pred HHHHHhhccEEEeechhhH
Q 016925 349 VLTIFMHLFVFTMKWQLVY 367 (380)
Q Consensus 349 l~~ly~~a~vf~~~~~~~~ 367 (380)
....|+.+|+|+-++....
T Consensus 512 ~la~y~~aDIfLDpfpy~G 530 (631)
T 3q3e_A 512 YLRILHNCDMMVNPFPFGN 530 (631)
T ss_dssp HHHHHHTCSEEECCSSSCC
T ss_pred HHHHHhcCcEEEeCCcccC
Confidence 9999999999998775443
No 43
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=97.80 E-value=0.0017 Score=63.32 Aligned_cols=69 Identities=7% Similarity=-0.018 Sum_probs=46.5
Q ss_pred CEEEEEecCCC-----ccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016925 270 PAIISVAQFRP-----EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (380)
Q Consensus 270 ~~il~VGRl~p-----~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v 344 (380)
.+++++|++.. .|.++.+++|++. .++++++++++.. .++++ +++++|.+.|++
T Consensus 269 ~v~v~~Gs~~~~~~~~~~~~~~~~~al~~---------~~~~~v~~~g~~~------~~~l~------~~~~~v~~~~~~ 327 (441)
T 2yjn_A 269 RVCLTLGISSRENSIGQVSIEELLGAVGD---------VDAEIIATFDAQQ------LEGVA------NIPDNVRTVGFV 327 (441)
T ss_dssp EEEEEC----------CCSTTTTHHHHHT---------SSSEEEECCCTTT------TSSCS------SCCSSEEECCSC
T ss_pred EEEEECCCCcccccChHHHHHHHHHHHHc---------CCCEEEEEECCcc------hhhhc------cCCCCEEEecCC
Confidence 47789999875 4889999988863 2578888776421 11221 467899999999
Q ss_pred CHHHHHHHHhhccEEEee
Q 016925 345 LYRSVLTIFMHLFVFTMK 362 (380)
Q Consensus 345 ~~~el~~ly~~a~vf~~~ 362 (380)
++ .++|++||+|+..
T Consensus 328 ~~---~~ll~~ad~~V~~ 342 (441)
T 2yjn_A 328 PM---HALLPTCAATVHH 342 (441)
T ss_dssp CH---HHHGGGCSEEEEC
T ss_pred CH---HHHHhhCCEEEEC
Confidence 85 4679999999974
No 44
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=97.76 E-value=0.00034 Score=67.01 Aligned_cols=72 Identities=6% Similarity=-0.040 Sum_probs=44.4
Q ss_pred CCEEEEEecCCCccC-hHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016925 269 YPAIISVAQFRPEKA-HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (380)
Q Consensus 269 ~~~il~VGRl~p~K~-~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~ 347 (380)
...+++.|.+...++ .+.+.+++..+ .+ .+.++++.+.+.... ....++++|.+.+++|.
T Consensus 238 ~~v~vs~Gs~~~~~~~~~~~~~~~~~l-~~-----~~~~~v~~~~~~~~~------------~~~~~~~~v~~~~~~p~- 298 (400)
T 4amg_A 238 RRIAVTLGSIDALSGGIAKLAPLFSEV-AD-----VDAEFVLTLGGGDLA------------LLGELPANVRVVEWIPL- 298 (400)
T ss_dssp CEEEECCCSCC--CCSSSTTHHHHHHG-GG-----SSSEEEEECCTTCCC------------CCCCCCTTEEEECCCCH-
T ss_pred cEEEEeCCcccccCccHHHHHHHHHHh-hc-----cCceEEEEecCcccc------------ccccCCCCEEEEeecCH-
Confidence 346677888876554 34444444444 32 467777766543211 11357899999999984
Q ss_pred HHHHHHhhccEEEe
Q 016925 348 SVLTIFMHLFVFTM 361 (380)
Q Consensus 348 el~~ly~~a~vf~~ 361 (380)
.++|+.+|+|+.
T Consensus 299 --~~lL~~~~~~v~ 310 (400)
T 4amg_A 299 --GALLETCDAIIH 310 (400)
T ss_dssp --HHHHTTCSEEEE
T ss_pred --HHHhhhhhheec
Confidence 467899999885
No 45
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=97.51 E-value=0.019 Score=55.39 Aligned_cols=72 Identities=15% Similarity=0.052 Sum_probs=44.9
Q ss_pred CCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeE-EEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016925 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRL-QFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (380)
Q Consensus 269 ~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~L-vIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~ 347 (380)
...+++.|... .+..+.+.+.+..+ +. .++++ +++|.+.. .++++ .++++|.+.|++++.
T Consensus 256 ~~v~v~~Gs~~-~~~~~~~~~~~~al-~~-----~~~~~~~~~g~~~~------~~~~~------~~~~~v~~~~~~~~~ 316 (424)
T 2iya_A 256 PVLLIALGSAF-TDHLDFYRTCLSAV-DG-----LDWHVVLSVGRFVD------PADLG------EVPPNVEVHQWVPQL 316 (424)
T ss_dssp CEEEEECCSSS-CCCHHHHHHHHHHH-TT-----CSSEEEEECCTTSC------GGGGC------SCCTTEEEESSCCHH
T ss_pred CEEEEEcCCCC-cchHHHHHHHHHHH-hc-----CCcEEEEEECCcCC------hHHhc------cCCCCeEEecCCCHH
Confidence 45678889987 33334333333333 21 56777 45676421 11221 357899999999854
Q ss_pred HHHHHHhhccEEEee
Q 016925 348 SVLTIFMHLFVFTMK 362 (380)
Q Consensus 348 el~~ly~~a~vf~~~ 362 (380)
++|+.||+|+..
T Consensus 317 ---~~l~~~d~~v~~ 328 (424)
T 2iya_A 317 ---DILTKASAFITH 328 (424)
T ss_dssp ---HHHTTCSEEEEC
T ss_pred ---HHHhhCCEEEEC
Confidence 789999998864
No 46
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=97.23 E-value=0.093 Score=50.33 Aligned_cols=70 Identities=10% Similarity=0.095 Sum_probs=49.8
Q ss_pred CCEEEEEecCC-CccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016925 269 YPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (380)
Q Consensus 269 ~~~il~VGRl~-p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~ 347 (380)
+..+++.|++. +.+.++.+++|++.+ +.+++++++.... + ..++.++|.+.|+++.
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~---------~~~vv~~~g~~~~------~-------~~~~~~~v~~~~~~~~- 278 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ---------GRRVVLSSGWAGL------G-------RIDEGDDCLVVGEVNH- 278 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT---------TCCEEEECTTTTC------C-------CSSCCTTEEEESSCCH-
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC---------CCEEEEEeCCccc------c-------cccCCCCEEEecCCCH-
Confidence 46788899998 777778888777643 4677776543211 0 1245789999999984
Q ss_pred HHHHHHhhccEEEeec
Q 016925 348 SVLTIFMHLFVFTMKW 363 (380)
Q Consensus 348 el~~ly~~a~vf~~~~ 363 (380)
.+++.+||+++...
T Consensus 279 --~~ll~~~d~~v~~g 292 (404)
T 3h4t_A 279 --QVLFGRVAAVVHHG 292 (404)
T ss_dssp --HHHGGGSSEEEECC
T ss_pred --HHHHhhCcEEEECC
Confidence 56889999998643
No 47
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=96.53 E-value=0.59 Score=44.64 Aligned_cols=68 Identities=12% Similarity=0.137 Sum_probs=47.4
Q ss_pred CCEEEEEecC-CCccChHHHHHHHHHHHHHccCCCCCCeEEEE-cCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016925 269 YPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (380)
Q Consensus 269 ~~~il~VGRl-~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIv-G~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~ 346 (380)
...+++.|++ .+.|..+.+++|++.+ +.+++++ |.+.. + + .+++++|.+.|++++
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~-------~-~------~~~~~~v~~~~~~~~ 295 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---------GRRVILSRGWADL-------V-L------PDDGADCFAIGEVNH 295 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---------TCCEEECTTCTTC-------C-C------SSCGGGEEECSSCCH
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---------CCeEEEEeCCCcc-------c-c------cCCCCCEEEeCcCCh
Confidence 4678899999 5888888888888754 2455554 75421 0 0 245689999999986
Q ss_pred HHHHHHHhhccEEEee
Q 016925 347 RSVLTIFMHLFVFTMK 362 (380)
Q Consensus 347 ~el~~ly~~a~vf~~~ 362 (380)
. ++|++||+|+..
T Consensus 296 ~---~~l~~~d~~v~~ 308 (415)
T 1iir_A 296 Q---VLFGRVAAVIHH 308 (415)
T ss_dssp H---HHGGGSSEEEEC
T ss_pred H---HHHhhCCEEEeC
Confidence 4 458999999963
No 48
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=95.80 E-value=0.049 Score=56.57 Aligned_cols=151 Identities=11% Similarity=0.034 Sum_probs=100.6
Q ss_pred HHHhcCCCEEEEcCHHHHHHHHH-----HhCC-CCceEEecCCCCCCCCC----CC---------C--------------
Q 016925 216 GLVGSCADLAMVNSSWTQSHIEK-----LWGI-PDRIKRVYPPCDTSGLQ----VL---------P-------------- 262 (380)
Q Consensus 216 ~~~~~~ad~ii~~S~~~~~~i~~-----~~~~-~~k~~vi~~gvd~~~~~----~~---------~-------------- 262 (380)
...+..++.|-+||..=.+.++. ++.. +.+..=|-|||+...+. |. +
T Consensus 397 ~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l 476 (796)
T 2c4m_A 397 WIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKL 476 (796)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGG
T ss_pred HHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHH
Confidence 34556899999999887777763 2221 45777788999876551 10 1
Q ss_pred ---C-C-----------------------------CCCCCCEEEEEecCCCccChHH-HHHHHHHHHH--HccC-CCCCC
Q 016925 263 ---L-E-----------------------------RSTEYPAIISVAQFRPEKAHPL-QLEAFSVALR--KLDA-DLPRP 305 (380)
Q Consensus 263 ---~-~-----------------------------~~~~~~~il~VGRl~p~K~~d~-li~A~~~l~~--~~~~-~~~~~ 305 (380)
. . ..++.+++++|.|+..+|+.++ ++..+.++.+ +.++ ...+.
T Consensus 477 ~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~ 556 (796)
T 2c4m_A 477 RSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPAR 556 (796)
T ss_dssp GGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCE
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCe
Confidence 0 0 0134579999999999999999 8999888764 2100 00257
Q ss_pred eEEEEcCCCCCCCHHHHHHHHHHHHhc--------CCCC--cEEEccCCCHHHHHHHHhhccEEEeec---hhhHH
Q 016925 306 RLQFVGSCRNKSDEERLQSLKDKSIEL--------KVDG--NVEFYKNLLYRSVLTIFMHLFVFTMKW---QLVYD 368 (380)
Q Consensus 306 ~LvIvG~g~~~~~~~~~~~L~~la~~l--------gl~~--~V~f~G~v~~~el~~ly~~a~vf~~~~---~~~~~ 368 (380)
.+++.|.+... . +....+-+++.++ .+++ +|.|+.+-+.+--..+++.||++.|+. .|..|
T Consensus 557 q~If~GKA~P~-y-~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsG 630 (796)
T 2c4m_A 557 TVIFGAKAAPG-Y-VRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASG 630 (796)
T ss_dssp EEEEECCCCTT-C-HHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCC
T ss_pred EEEEEecCCHh-H-HHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCc
Confidence 88999987422 2 1222333333333 5788 899998877777889999999999854 45544
No 49
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=95.76 E-value=0.059 Score=55.96 Aligned_cols=147 Identities=10% Similarity=-0.024 Sum_probs=96.4
Q ss_pred HHHhcCCCEEEEcCHHHHHHHHH-----HhCC-CCceEEecCCCCCCCCC----C-------------------------
Q 016925 216 GLVGSCADLAMVNSSWTQSHIEK-----LWGI-PDRIKRVYPPCDTSGLQ----V------------------------- 260 (380)
Q Consensus 216 ~~~~~~ad~ii~~S~~~~~~i~~-----~~~~-~~k~~vi~~gvd~~~~~----~------------------------- 260 (380)
...+..++.|-+||..=.+.++. ++.. +.+..=|-|||+...+. |
T Consensus 408 ~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~ 487 (796)
T 1l5w_A 408 NLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLE 487 (796)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGG
T ss_pred HHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHH
Confidence 34556899999999887777763 1211 35777788999642220 0
Q ss_pred --CC-------C---------------------CCCCCCCEEEEEecCCCccChHH-HHHHHHHHHHHccC---CCCCCe
Q 016925 261 --LP-------L---------------------ERSTEYPAIISVAQFRPEKAHPL-QLEAFSVALRKLDA---DLPRPR 306 (380)
Q Consensus 261 --~~-------~---------------------~~~~~~~~il~VGRl~p~K~~d~-li~A~~~l~~~~~~---~~~~~~ 306 (380)
.+ . ...++.+++++|.|+..+|+.++ ++..+.++.+-... ...+..
T Consensus 488 ~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q 567 (796)
T 1l5w_A 488 KFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRV 567 (796)
T ss_dssp GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEE
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeE
Confidence 00 0 00134679999999999999999 89988887541100 013578
Q ss_pred EEEEcCCCCCCCHHHHHHHHHHHHhc--------CCCC--cEEEccCCCHHHHHHHHhhccEEEeech
Q 016925 307 LQFVGSCRNKSDEERLQSLKDKSIEL--------KVDG--NVEFYKNLLYRSVLTIFMHLFVFTMKWQ 364 (380)
Q Consensus 307 LvIvG~g~~~~~~~~~~~L~~la~~l--------gl~~--~V~f~G~v~~~el~~ly~~a~vf~~~~~ 364 (380)
+++.|.+... . .....+-+++.++ .+++ +|.|+.+-+.+--..+++.||++.|+..
T Consensus 568 ~If~GKA~P~-y-~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~ 633 (796)
T 1l5w_A 568 FLFGAKAAPG-Y-YLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQIST 633 (796)
T ss_dssp EEEECCCCTT-C-HHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCC
T ss_pred EEEEecCChh-H-HHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCC
Confidence 8999987422 2 1222333333333 5778 8999988777778899999999998543
No 50
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=95.70 E-value=0.012 Score=49.07 Aligned_cols=68 Identities=12% Similarity=0.068 Sum_probs=49.4
Q ss_pred CCEEEEEecCC---CccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016925 269 YPAIISVAQFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (380)
Q Consensus 269 ~~~il~VGRl~---p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~ 345 (380)
...++++|++. +.|.++.+++|++.+ +.++++++++... -+++++|.+.|+++
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~~~~~g~~~~---------------~~~~~~v~~~~~~~ 77 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---------PQKVLWRFDGNKP---------------DTLGLNTRLYKWIP 77 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---------SSEEEEECCSSCC---------------TTCCTTEEEESSCC
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---------CCeEEEEECCcCc---------------ccCCCcEEEecCCC
Confidence 45789999995 778888888887532 3688887765321 03578999999999
Q ss_pred HHHHHHHHhhccEEEe
Q 016925 346 YRSVLTIFMHLFVFTM 361 (380)
Q Consensus 346 ~~el~~ly~~a~vf~~ 361 (380)
++++..+ ++||+|+.
T Consensus 78 ~~~~l~~-~~ad~~I~ 92 (170)
T 2o6l_A 78 QNDLLGH-PKTRAFIT 92 (170)
T ss_dssp HHHHHTS-TTEEEEEE
T ss_pred HHHHhcC-CCcCEEEE
Confidence 7544322 99999997
No 51
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=94.85 E-value=0.088 Score=54.91 Aligned_cols=145 Identities=10% Similarity=0.004 Sum_probs=96.1
Q ss_pred HHhcCCCEEEEcCHHHHHHHHH-H----hCC-CCceEEecCCCCCCCCC----C--------------------------
Q 016925 217 LVGSCADLAMVNSSWTQSHIEK-L----WGI-PDRIKRVYPPCDTSGLQ----V-------------------------- 260 (380)
Q Consensus 217 ~~~~~ad~ii~~S~~~~~~i~~-~----~~~-~~k~~vi~~gvd~~~~~----~-------------------------- 260 (380)
..+..++.|-+||.-=.+.+++ . +.. ++++.=|-|||+...+. |
T Consensus 433 lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~ 512 (824)
T 2gj4_A 433 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLS 512 (824)
T ss_dssp HHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGG
T ss_pred HHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHh
Confidence 4567899999999877777653 1 211 45777788999765551 1
Q ss_pred CC----C-----C--------------------CCCCCCEEEEEecCCCccChHHH-HHHHHHHHH--HccCCCC--CCe
Q 016925 261 LP----L-----E--------------------RSTEYPAIISVAQFRPEKAHPLQ-LEAFSVALR--KLDADLP--RPR 306 (380)
Q Consensus 261 ~~----~-----~--------------------~~~~~~~il~VGRl~p~K~~d~l-i~A~~~l~~--~~~~~~~--~~~ 306 (380)
.. . + ..++.+++++|.|+..+|+.+++ +..+.++.+ ..+ ..| +..
T Consensus 513 y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~-~~~~~p~q 591 (824)
T 2gj4_A 513 YVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEP-NKFVVPRT 591 (824)
T ss_dssp GTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCT-TSCCCCEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCC-CCCCCCEE
Confidence 00 0 0 01345799999999999999998 888887742 221 112 568
Q ss_pred EEEEcCCCCCCCHHHHHH----HHHHHH----hcCCCC--cEEEccCCCHHHHHHHHhhccEEEeech
Q 016925 307 LQFVGSCRNKSDEERLQS----LKDKSI----ELKVDG--NVEFYKNLLYRSVLTIFMHLFVFTMKWQ 364 (380)
Q Consensus 307 LvIvG~g~~~~~~~~~~~----L~~la~----~lgl~~--~V~f~G~v~~~el~~ly~~a~vf~~~~~ 364 (380)
+++.|.+... .. .... +.+.++ +-.+++ +|.|+.+-+.+--..+++.||++.|+..
T Consensus 592 ~If~GKA~P~-y~-~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ 657 (824)
T 2gj4_A 592 VMIGGKAAPG-YH-MAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQIST 657 (824)
T ss_dssp EEEECCCCTT-CH-HHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCC
T ss_pred EEEEEeCCHh-HH-HHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCC
Confidence 9999987422 21 1122 444443 224577 8999988777778899999999998543
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=92.16 E-value=7.4 Score=36.18 Aligned_cols=81 Identities=9% Similarity=-0.021 Sum_probs=54.1
Q ss_pred CCE-EEEEecCCCccCh--HHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016925 269 YPA-IISVAQFRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (380)
Q Consensus 269 ~~~-il~VGRl~p~K~~--d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~ 345 (380)
+++ ++..|-=.+.|.. +...+....+.++ +.++++.|+.. +. +..++.++.++ ...+.+.|..+
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~------g~~vvl~g~~~---e~---~~~~~i~~~~~-~~~~~l~g~~s 251 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRL------GYKTVFFGGPM---DL---EMVQPVVEQME-TKPIVATGKFQ 251 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH------TCEEEECCCTT---TH---HHHHHHHHTCS-SCCEECTTCCC
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC------CCeEEEEeCcc---hH---HHHHHHHHhcc-cccEEeeCCCC
Confidence 344 4556654567776 4566666666542 67888888642 22 34455555554 34577889999
Q ss_pred HHHHHHHHhhccEEEee
Q 016925 346 YRSVLTIFMHLFVFTMK 362 (380)
Q Consensus 346 ~~el~~ly~~a~vf~~~ 362 (380)
-.|+..++++||+++..
T Consensus 252 l~e~~ali~~a~~~i~~ 268 (349)
T 3tov_A 252 LGPLAAAMNRCNLLITN 268 (349)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhCCEEEEC
Confidence 99999999999998863
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=89.85 E-value=1.1 Score=46.44 Aligned_cols=83 Identities=12% Similarity=0.036 Sum_probs=68.5
Q ss_pred CEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCC-CcEEEccCCCHHH
Q 016925 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEFYKNLLYRS 348 (380)
Q Consensus 270 ~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~-~~V~f~G~v~~~e 348 (380)
..|+|..==...|=.+..+++|..++++. |+.+|++...... -.+.|++.+++.|++ ++|+|.+..+.+|
T Consensus 522 ~~v~f~~fN~~~Ki~p~~~~~W~~IL~~v----P~S~L~Ll~~~~~-----~~~~l~~~~~~~gi~~~r~~f~~~~~~~~ 592 (723)
T 4gyw_A 522 DAIVYCNFNQLYKIDPSTLQMWANILKRV----PNSVLWLLRFPAV-----GEPNIQQYAQNMGLPQNRIIFSPVAPKEE 592 (723)
T ss_dssp TSEEEECCSCGGGCCHHHHHHHHHHHHHC----SSEEEEEEETTGG-----GHHHHHHHHHHTTCCGGGEEEEECCCHHH
T ss_pred CCEEEEeCCccccCCHHHHHHHHHHHHhC----CCCeEEEEeCcHH-----HHHHHHHHHHhcCCCcCeEEECCCCCHHH
Confidence 34666555556889999999999999986 9999999886421 236789999999996 7899999999999
Q ss_pred HHHHHhhccEEEe
Q 016925 349 VLTIFMHLFVFTM 361 (380)
Q Consensus 349 l~~ly~~a~vf~~ 361 (380)
--..|+.+|+++=
T Consensus 593 ~l~~~~~~Di~LD 605 (723)
T 4gyw_A 593 HVRRGQLADVCLD 605 (723)
T ss_dssp HHHHGGGCSEEEC
T ss_pred HHHHhCCCeEEeC
Confidence 9999999999883
No 54
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=84.60 E-value=1.3 Score=40.39 Aligned_cols=76 Identities=7% Similarity=0.002 Sum_probs=51.7
Q ss_pred CEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHH
Q 016925 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSV 349 (380)
Q Consensus 270 ~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el 349 (380)
..+++.|--++..-.+.+++++. +. .. -.++.|.+.. ..+++++.+++. .++.+.++++ ++
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~---~~-----~~-i~vv~G~~~~-----~~~~l~~~~~~~---~~v~v~~~~~--~m 219 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELP---KT-----KI-ISIATSSSNP-----NLKKLQKFAKLH---NNIRLFIDHE--NI 219 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSC---TT-----SC-EEEEECTTCT-----THHHHHHHHHTC---SSEEEEESCS--CH
T ss_pred eEEEEECCCchhhHHHHHHHHhh---cC-----CC-EEEEECCCch-----HHHHHHHHHhhC---CCEEEEeCHH--HH
Confidence 46778998877654445554443 11 22 4467776531 357888877653 3799999986 89
Q ss_pred HHHHhhccEEEeech
Q 016925 350 LTIFMHLFVFTMKWQ 364 (380)
Q Consensus 350 ~~ly~~a~vf~~~~~ 364 (380)
+++|+.||+.+.+..
T Consensus 220 ~~~m~~aDlvI~~gG 234 (282)
T 3hbm_A 220 AKLMNESNKLIISAS 234 (282)
T ss_dssp HHHHHTEEEEEEESS
T ss_pred HHHHHHCCEEEECCc
Confidence 999999999887543
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=81.56 E-value=3.4 Score=38.00 Aligned_cols=80 Identities=11% Similarity=0.080 Sum_probs=52.8
Q ss_pred EEEEEec-CCCccChH--HHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcC--C-CCcEEEccCC
Q 016925 271 AIISVAQ-FRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK--V-DGNVEFYKNL 344 (380)
Q Consensus 271 ~il~VGR-l~p~K~~d--~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lg--l-~~~V~f~G~v 344 (380)
.++..|. ..+.|+.. ...+++..+.+ .+.++++.|+.. +. +..++.++.++ . ...+.+.|..
T Consensus 183 i~l~pga~~~~~k~wp~~~~~~l~~~L~~------~~~~vvl~g~~~---e~---~~~~~i~~~~~~~~~~~~~~l~g~~ 250 (348)
T 1psw_A 183 IGFCPGAEFGPAKRWPHYHYAELAKQLID------EGYQVVLFGSAK---DH---EAGNEILAALNTEQQAWCRNLAGET 250 (348)
T ss_dssp EEEECCCTTCGGGSCCHHHHHHHHHHHHH------TTCEEEECCCGG---GH---HHHHHHHTTSCHHHHTTEEECTTTS
T ss_pred EEEECCCCccccCCCCHHHHHHHHHHHHH------CCCeEEEEeChh---hH---HHHHHHHHhhhhccccceEeccCcC
Confidence 4466665 66778876 67777776654 378999998642 22 23333333222 1 1235688988
Q ss_pred CHHHHHHHHhhccEEEee
Q 016925 345 LYRSVLTIFMHLFVFTMK 362 (380)
Q Consensus 345 ~~~el~~ly~~a~vf~~~ 362 (380)
+-.|+..+++.||+++-.
T Consensus 251 sl~e~~ali~~a~l~I~~ 268 (348)
T 1psw_A 251 QLDQAVILIAACKAIVTN 268 (348)
T ss_dssp CHHHHHHHHHTSSEEEEE
T ss_pred CHHHHHHHHHhCCEEEec
Confidence 899999999999998864
No 56
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=75.52 E-value=19 Score=33.91 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=47.5
Q ss_pred CCEEEEEecCC---CccChHHHHHHHHHHHHHccCCCCCCeEEEE-cCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016925 269 YPAIISVAQFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (380)
Q Consensus 269 ~~~il~VGRl~---p~K~~d~li~A~~~l~~~~~~~~~~~~LvIv-G~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v 344 (380)
...+++.|++. +.|..+.+++|++.+ +.+++++ |.+.. + + ..++++|.+.|++
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~-------~-~------~~~~~~v~~~~~~ 294 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---------GRRVILSRGWTEL-------V-L------PDDRDDCFAIDEV 294 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---------TCCEEEECTTTTC-------C-C------SCCCTTEEEESSC
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---------CCeEEEEeCCccc-------c-c------cCCCCCEEEeccC
Confidence 45778889985 567777777777643 3566665 75421 1 1 2467899999999
Q ss_pred CHHHHHHHHhhccEEEee
Q 016925 345 LYRSVLTIFMHLFVFTMK 362 (380)
Q Consensus 345 ~~~el~~ly~~a~vf~~~ 362 (380)
+. .++|++||+|+..
T Consensus 295 ~~---~~ll~~~d~~v~~ 309 (416)
T 1rrv_A 295 NF---QALFRRVAAVIHH 309 (416)
T ss_dssp CH---HHHGGGSSEEEEC
T ss_pred Ch---HHHhccCCEEEec
Confidence 84 4578999999973
No 57
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=72.85 E-value=5.3 Score=37.80 Aligned_cols=37 Identities=5% Similarity=-0.038 Sum_probs=28.3
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCC
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~ 76 (380)
|||+++ +.. ++|--.-...++++|+++| |+|+++++.
T Consensus 1 MrIl~~-~~~--~~GH~~p~l~la~~L~~~G--h~V~~~~~~ 37 (416)
T 1rrv_A 1 MRVLLS-VCG--TRGDVEIGVALADRLKALG--VQTRMCAPP 37 (416)
T ss_dssp CEEEEE-EES--CHHHHHHHHHHHHHHHHTT--CEEEEEECG
T ss_pred CeEEEE-ecC--CCccHHHHHHHHHHHHHCC--CeEEEEeCH
Confidence 688888 322 3566667889999999998 888888754
No 58
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=71.87 E-value=39 Score=31.09 Aligned_cols=124 Identities=7% Similarity=-0.040 Sum_probs=77.6
Q ss_pred HHhcCCCEEE--EcCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----C------CCCCCCCCEEEEEecCCCccCh
Q 016925 217 LVGSCADLAM--VNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----P------LERSTEYPAIISVAQFRPEKAH 284 (380)
Q Consensus 217 ~~~~~ad~ii--~~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----~------~~~~~~~~~il~VGRl~p~K~~ 284 (380)
.+.+.+|.|+ +.++...+++.+...+ -|| |+-| +...|. . .....++..|.+||-+
T Consensus 99 vLs~~~D~iviR~~~~~~~~~lA~~~~v----PVI-Nag~-~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~------ 166 (323)
T 3gd5_A 99 VLGRYVDGLAIRTFAQTELEEYAHYAGI----PVI-NALT-DHEHPCQVVADLLTIRENFGRLAGLKLAYVGDG------ 166 (323)
T ss_dssp HHTTTCSEEEEECSSHHHHHHHHHHHCS----CEE-EEEC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC------
T ss_pred HHHHhCCEEEEecCChhHHHHHHHhCCC----CEE-eCCC-CCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCC------
Confidence 3446789888 4666777777776543 244 5555 444441 0 0012346789999976
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ec
Q 016925 285 PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KW 363 (380)
Q Consensus 285 d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~ 363 (380)
-.+...+...... -+..+.++|........+..+.+++.+++.|. .|...- ++.+.+..||+..+ .|
T Consensus 167 ~rva~Sl~~~~~~-----~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~--~v~~~~-----d~~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 167 NNVAHSLLLGCAK-----VGMSIAVATPEGFTPDPAVSARASEIAGRTGA--EVQILR-----DPFEAARGAHILYTDVW 234 (323)
T ss_dssp CHHHHHHHHHHHH-----HTCEEEEECCTTCCCCHHHHHHHHHHHHHHTC--CEEEES-----CHHHHHTTCSEEEECCC
T ss_pred CcHHHHHHHHHHH-----cCCEEEEECCCcccCCHHHHHHHHHHHHHcCC--eEEEEC-----CHHHHhcCCCEEEEece
Confidence 2444555544443 36899999976544555666777777777764 466553 46688999999665 56
Q ss_pred h
Q 016925 364 Q 364 (380)
Q Consensus 364 ~ 364 (380)
+
T Consensus 235 q 235 (323)
T 3gd5_A 235 T 235 (323)
T ss_dssp C
T ss_pred e
Confidence 3
No 59
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=67.38 E-value=54 Score=30.66 Aligned_cols=121 Identities=9% Similarity=-0.097 Sum_probs=77.0
Q ss_pred cCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC-C---------CCCCCCCCEEEEEecCCCccChHHH
Q 016925 220 SCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-P---------LERSTEYPAIISVAQFRPEKAHPLQ 287 (380)
Q Consensus 220 ~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~-~---------~~~~~~~~~il~VGRl~p~K~~d~l 287 (380)
+.+|.|+. .++...+.+.+..++ -|| |+-+ ....|. . .....+...|.+||-. +| .+
T Consensus 121 ~~~D~IviR~~~~~~~~~lA~~s~v----PVI-Na~~-~~~HPtQaLaDl~Ti~E~~g~l~gl~va~vGD~---~~--rv 189 (359)
T 2w37_A 121 SMFDGIEFRGFKQSDAEILARDSGV----PVW-NGLT-DEWHPTQMLADFMTVKENFGKLQGLTLTFMGDG---RN--NV 189 (359)
T ss_dssp HHCSEEEEESSCHHHHHHHHHHSSS----CEE-EEEC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCT---TS--HH
T ss_pred HhcCEEEEecCChHHHHHHHHhCCC----CEE-cCCC-CCCCccHHHHHHHHHHHHhCCcCCeEEEEECCC---cc--ch
Confidence 45798885 577777777775532 345 5554 444441 0 0012345789999975 22 55
Q ss_pred HHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ec
Q 016925 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KW 363 (380)
Q Consensus 288 i~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~ 363 (380)
..++....... +..+.++|........+..+.+++.+++.|. .|.++- ++.+.+..||+..+ .|
T Consensus 190 a~Sl~~~~~~l-----G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~--~v~~~~-----d~~eav~~aDvvytd~w 254 (359)
T 2w37_A 190 ANSLLVTGAIL-----GVNIHIVAPKALFPTEETQNIAKGFAEKSGA--KLVITD-----DLDEGLKGSNVVYTDVW 254 (359)
T ss_dssp HHHHHHHHHHH-----TCEEEEECCGGGSCCHHHHHHHHHHHHHHTC--CEEEES-----CHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHc-----CCEEEEECCccccCCHHHHHHHHHHHHHcCC--eEEEEe-----CHHHHhcCCCEEEEccc
Confidence 56666655543 6899999975444444556677778878874 466653 56788999999776 77
No 60
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=65.02 E-value=76 Score=28.25 Aligned_cols=134 Identities=16% Similarity=0.096 Sum_probs=72.1
Q ss_pred HHHHhcCCCEEEEcCHHHHHHHHHHhCCCCceEEecCCCC-CCCCC-CCCCCCCCCCCEEEEEecCCCccChHHHHHHHH
Q 016925 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCD-TSGLQ-VLPLERSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (380)
Q Consensus 215 ~~~~~~~ad~ii~~S~~~~~~i~~~~~~~~k~~vi~~gvd-~~~~~-~~~~~~~~~~~~il~VGRl~p~K~~d~li~A~~ 292 (380)
+++.....|.|++++....+.+.+... ++-||+.+++ +..-. ..+... ....+--+.-..| ++..++.+.
T Consensus 63 ~~l~~~~~DlIiai~t~aa~a~~~~~~---~iPVVf~~v~dp~~~~l~~~~~~--~g~nvtGv~~~~~---~~~~l~l~~ 134 (302)
T 3lkv_A 63 RQFVGENPDVLVGIATPTAQALVSATK---TIPIVFTAVTDPVGAKLVKQLEQ--PGKNVTGLSDLSP---VEQHVELIK 134 (302)
T ss_dssp HHHHTTCCSEEEEESHHHHHHHHHHCS---SSCEEEEEESCTTTTTSCSCSSS--CCSSEEEEECCCC---HHHHHHHHH
T ss_pred HHHHhcCCcEEEEcCCHHHHHHHhhcC---CCCeEEEecCCcchhhhcccccC--CCCcEEEEECCcC---HHHHHHHHH
Confidence 345567899999998877777665432 2335555543 11111 011111 1234444443333 555565555
Q ss_pred HHHHHccCCCCCC-eEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHH----HHHhhccEEEeechh
Q 016925 293 VALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVL----TIFMHLFVFTMKWQL 365 (380)
Q Consensus 293 ~l~~~~~~~~~~~-~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~----~ly~~a~vf~~~~~~ 365 (380)
++. |+. ++.++++..........+.+++.++++|++ +......+.+++. .+....|++..++..
T Consensus 135 ~l~-------P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~l~~~~d~i~~~~d~ 203 (302)
T 3lkv_A 135 EIL-------PNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIK--LVEATALKSADVQSATQAIAEKSDVIYALIDN 203 (302)
T ss_dssp HHS-------TTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCE--EEEEECSSGGGHHHHHHHHHTTCSEEEECSCH
T ss_pred HhC-------CCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCE--EEEEecCChHHHHHHHHhccCCeeEEEEeCCc
Confidence 553 444 465666543222334567889999999875 4444433444544 444667776665543
No 61
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=63.94 E-value=54 Score=30.40 Aligned_cols=121 Identities=11% Similarity=0.013 Sum_probs=75.1
Q ss_pred cCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----C------CCCCCCCCEEEEEecCCCccChHHH
Q 016925 220 SCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----P------LERSTEYPAIISVAQFRPEKAHPLQ 287 (380)
Q Consensus 220 ~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----~------~~~~~~~~~il~VGRl~p~K~~d~l 287 (380)
+.+|.|+. .++...+++.+... +-|| |+-| ....|. . .....++..|.+||-+ .| +
T Consensus 124 ~y~D~IviR~~~~~~~~~lA~~~~----vPVI-Nag~-~~~HPtQaLaDl~TI~E~~G~l~glkva~vGD~---~n---v 191 (340)
T 4ep1_A 124 HYIDGIMIRTFSHADVEELAKESS----IPVI-NGLT-DDHHPCQALADLMTIYEETNTFKGIKLAYVGDG---NN---V 191 (340)
T ss_dssp HHCSEEEEECSCHHHHHHHHHHCS----SCEE-EEEC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC---CH---H
T ss_pred HhCCEEEEecCChhHHHHHHHhCC----CCEE-eCCC-CCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCC---ch---h
Confidence 45798884 56666777776543 2245 5544 334441 0 0012356789999976 33 4
Q ss_pred HHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ech
Q 016925 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KWQ 364 (380)
Q Consensus 288 i~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~~ 364 (380)
.+.+....... +.++.++|........+..+.+++.+++.|. .|...- ++.+.+..||+..+ .|+
T Consensus 192 a~Sl~~~~~~~-----G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~--~v~~~~-----d~~eav~~aDVvyt~~w~ 257 (340)
T 4ep1_A 192 CHSLLLASAKV-----GMHMTVATPVGYRPNEEIVKKALAIAKETGA--EIEILH-----NPELAVNEADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHHHH-----TCEEEEECCTTCCCCHHHHHHHHHHHHHHCC--CEEEES-----CHHHHHTTCSEEEECCC-
T ss_pred HHHHHHHHHHc-----CCEEEEECCcccCCCHHHHHHHHHHHHHcCC--eEEEEC-----CHHHHhCCCCEEEecCcc
Confidence 45555544442 6899999976544556667777888888774 466544 46688999999654 665
No 62
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=63.62 E-value=90 Score=28.80 Aligned_cols=124 Identities=6% Similarity=-0.049 Sum_probs=79.1
Q ss_pred HHhcCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----------CC-CC-CCCCCEEEEEecCCCcc
Q 016925 217 LVGSCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----------PL-ER-STEYPAIISVAQFRPEK 282 (380)
Q Consensus 217 ~~~~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----------~~-~~-~~~~~~il~VGRl~p~K 282 (380)
.+.+.+|.|+. .++...+++.+..++ -|| |+-+ +...|. .. .. ..+...|.+||-. +
T Consensus 95 vLs~~~D~IviR~~~~~~~~~lA~~~~v----PVI-Na~~-~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~---~ 165 (333)
T 1duv_G 95 VLGRMYDGIQYRGYGQEIVETLAEYASV----PVW-NGLT-NEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDA---R 165 (333)
T ss_dssp HHTTTCSEEEEECSCHHHHHHHHHHHSS----CEE-ESCC-SSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCT---T
T ss_pred HHHHhCCEEEEEcCCchHHHHHHHhCCC----CeE-cCCC-CCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCC---c
Confidence 34567898885 677777777776543 245 5655 444441 11 11 1234689999975 2
Q ss_pred ChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-
Q 016925 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM- 361 (380)
Q Consensus 283 ~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~- 361 (380)
| .+.+++....... +..+.++|........+..+.+++.+++.|. .|.+.- ++.+.+..||+..+
T Consensus 166 ~--~va~Sl~~~~~~~-----G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~--~v~~~~-----d~~eav~~aDvvytd 231 (333)
T 1duv_G 166 N--NMGNSMLEAAALT-----GLDLRLVAPQACWPEAALVTECRALAQQNGG--NITLTE-----DVAKGVEGADFIYTD 231 (333)
T ss_dssp S--HHHHHHHHHHHHH-----CCEEEEECCGGGCCCHHHHHHHHHHHHHTTC--EEEEES-----CHHHHHTTCSEEEEC
T ss_pred c--chHHHHHHHHHHc-----CCEEEEECCcccCCCHHHHHHHHHHHHHcCC--eEEEEE-----CHHHHhCCCCEEEeC
Confidence 2 5556666655543 6899999975444444566677788888773 466653 56788999999776
Q ss_pred ec
Q 016925 362 KW 363 (380)
Q Consensus 362 ~~ 363 (380)
.|
T Consensus 232 ~w 233 (333)
T 1duv_G 232 VW 233 (333)
T ss_dssp CS
T ss_pred Cc
Confidence 77
No 63
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=63.06 E-value=27 Score=31.54 Aligned_cols=80 Identities=15% Similarity=0.101 Sum_probs=48.6
Q ss_pred EEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHH
Q 016925 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVL 350 (380)
Q Consensus 271 ~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~ 350 (380)
.++..|-=.+.|... .+-|+.+.+... ..+.++++.++++ +..+..++.++.. + ++.+.|..+-.|+.
T Consensus 181 i~l~pga~~~~k~wp--~~~~~~l~~~L~--~~~~~vvl~~g~~-----~e~~~~~~i~~~~--~-~~~l~g~~sl~el~ 248 (326)
T 2gt1_A 181 AVFLHATTRDDKHWP--EEHWRELIGLLA--DSGIRIKLPWGAP-----HEEERAKRLAEGF--A-YVEVLPKMSLEGVA 248 (326)
T ss_dssp EEEECCCSSGGGSCC--HHHHHHHHHHTT--TTCCEEEECCSSH-----HHHHHHHHHHTTC--T-TEEECCCCCHHHHH
T ss_pred EEEEeCCCCccccCC--HHHHHHHHHHHH--HCCCcEEEecCCH-----HHHHHHHHHHhhC--C-cccccCCCCHHHHH
Confidence 445666556677776 234444433321 1478888873321 1123334444332 2 46788988999999
Q ss_pred HHHhhccEEEee
Q 016925 351 TIFMHLFVFTMK 362 (380)
Q Consensus 351 ~ly~~a~vf~~~ 362 (380)
.++++||+++..
T Consensus 249 ali~~a~l~I~~ 260 (326)
T 2gt1_A 249 RVLAGAKFVVSV 260 (326)
T ss_dssp HHHHTCSEEEEE
T ss_pred HHHHhCCEEEec
Confidence 999999998853
No 64
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=62.77 E-value=82 Score=28.96 Aligned_cols=124 Identities=11% Similarity=0.068 Sum_probs=79.6
Q ss_pred HHhcCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC-C---------CCCCCCCCEEEEEecCCCccCh
Q 016925 217 LVGSCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-P---------LERSTEYPAIISVAQFRPEKAH 284 (380)
Q Consensus 217 ~~~~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~-~---------~~~~~~~~~il~VGRl~p~K~~ 284 (380)
.+.+.+|.|+. .++...+++.+...+ -|| |+-+ +...|. . .....+...|.+||-. +
T Consensus 109 vLs~~~D~iviR~~~~~~~~~lA~~~~v----PVI-Na~~-~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~---~-- 177 (325)
T 1vlv_A 109 VLGRMVDAIMFRGYKQETVEKLAEYSGV----PVY-NGLT-DEFHPTQALADLMTIEENFGRLKGVKVVFMGDT---R-- 177 (325)
T ss_dssp HHHTTCSEEEEESSCHHHHHHHHHHHCS----CEE-ESCC-SSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCT---T--
T ss_pred HHHHhCCEEEEECCChHHHHHHHHhCCC----CEE-eCCC-CCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCC---C--
Confidence 34467898885 577777777776543 245 5655 244441 0 0011245789999973 2
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ec
Q 016925 285 PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KW 363 (380)
Q Consensus 285 d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~ 363 (380)
-.+.+.+...... -+..+.++|........+..+.+++.+++.|. .|.+.- ++.+.+..||+..+ .|
T Consensus 178 ~rva~Sl~~~~~~-----~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~--~v~~~~-----d~~eav~~aDvvyt~~w 245 (325)
T 1vlv_A 178 NNVATSLMIACAK-----MGMNFVACGPEELKPRSDVFKRCQEIVKETDG--SVSFTS-----NLEEALAGADVVYTDVW 245 (325)
T ss_dssp SHHHHHHHHHHHH-----TTCEEEEESCGGGCCCHHHHHHHHHHHHHHCC--EEEEES-----CHHHHHTTCSEEEECCC
T ss_pred cCcHHHHHHHHHH-----CCCEEEEECCccccCCHHHHHHHHHHHHHcCC--eEEEEc-----CHHHHHccCCEEEeccc
Confidence 2566777776655 37899999975444444556677778878774 466553 56788999999776 77
No 65
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=59.94 E-value=4.1 Score=26.98 Aligned_cols=23 Identities=22% Similarity=0.590 Sum_probs=18.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHH
Q 016925 2 APYGILIWAVITAVLASILILAS 24 (380)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ 24 (380)
.|.++-+|-++.++++.+++|+-
T Consensus 3 ~~~~vp~WiIi~svl~GLLLL~L 25 (54)
T 2l8s_A 3 LPGRVPLWVILLSAFAGLLLLML 25 (54)
T ss_dssp CCCCCCTHHHHHHHHHHHHHHHH
T ss_pred CCccCchHHHHHHHHHHHHHHHH
Confidence 36677889999999988888763
No 66
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=57.88 E-value=72 Score=29.48 Aligned_cols=121 Identities=7% Similarity=-0.060 Sum_probs=77.2
Q ss_pred cCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----------CCCC-CCCCCEEEEEecCCCccChHH
Q 016925 220 SCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----------PLER-STEYPAIISVAQFRPEKAHPL 286 (380)
Q Consensus 220 ~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----------~~~~-~~~~~~il~VGRl~p~K~~d~ 286 (380)
+.+|.|+. .++...+.+.++.++ -|| |+-+ +...|. .... ..+...|.+||-. +| .
T Consensus 99 ~~~D~IviR~~~~~~~~~lA~~s~v----PVI-Na~~-~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~---~~--~ 167 (335)
T 1dxh_A 99 RMYDAIEYRGFKQEIVEELAKFAGV----PVF-NGLT-DEYHPTQMLADVLTMREHSDKPLHDISYAYLGDA---RN--N 167 (335)
T ss_dssp HHCSEEEEECSCHHHHHHHHHHSSS----CEE-EEEC-SSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCC---SS--H
T ss_pred hhCCEEEEecCChhHHHHHHHhCCC----CEE-cCCC-CCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCC---cc--c
Confidence 45798885 677777777775532 245 5554 444441 0111 1234689999975 22 5
Q ss_pred HHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ec
Q 016925 287 QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KW 363 (380)
Q Consensus 287 li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~ 363 (380)
+.+.+...... -+..+.++|........+..+.+++.+++.|. .|.++- ++.+.+..||+..+ .|
T Consensus 168 va~Sl~~~~~~-----~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~--~v~~~~-----d~~eav~~aDvvytd~w 233 (335)
T 1dxh_A 168 MGNSLLLIGAK-----LGMDVRIAAPKALWPHDEFVAQCKKFAEESGA--KLTLTE-----DPKEAVKGVDFVHTDVW 233 (335)
T ss_dssp HHHHHHHHHHH-----TTCEEEEECCGGGSCCHHHHHHHHHHHHHHTC--EEEEES-----CHHHHTTTCSEEEECCC
T ss_pred hHHHHHHHHHH-----cCCEEEEECCcccCCCHHHHHHHHHHHHHcCC--eEEEEe-----CHHHHhCCCCEEEeCCc
Confidence 66666666555 37899999975444445566677778878773 466653 56788999999776 77
No 67
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=57.24 E-value=86 Score=28.65 Aligned_cols=123 Identities=10% Similarity=0.031 Sum_probs=78.7
Q ss_pred HHhcCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC-C---------CCCCCCCCEEEEEecCCCccCh
Q 016925 217 LVGSCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-P---------LERSTEYPAIISVAQFRPEKAH 284 (380)
Q Consensus 217 ~~~~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~-~---------~~~~~~~~~il~VGRl~p~K~~ 284 (380)
.+.+.+|.|+. .++...+++.+... +-|| |+-+ +...|. . .....+...|.+||-.
T Consensus 97 vls~~~D~iviR~~~~~~~~~lA~~~~----vPVI-Na~~-~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~------ 164 (315)
T 1pvv_A 97 VLSRYVDAIMARVYDHKDVEDLAKYAT----VPVI-NGLS-DFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG------ 164 (315)
T ss_dssp HHTTTCSEEEEECSSHHHHHHHHHHCS----SCEE-EEEC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC------
T ss_pred HHHHhCcEEEEecCchHHHHHHHHhCC----CCEE-cCCC-CCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCC------
Confidence 34467898885 56777777776543 2345 5554 244441 0 0012345789999975
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ec
Q 016925 285 PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KW 363 (380)
Q Consensus 285 d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~ 363 (380)
-.+.+.+...... -+..+.++|........+..+.+++.+++.|. .|.+.- ++.+.+..||+..+ .|
T Consensus 165 ~rva~Sl~~~~~~-----~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~--~~~~~~-----d~~eav~~aDvvy~~~w 232 (315)
T 1pvv_A 165 NNVAHSLMIAGTK-----LGADVVVATPEGYEPDEKVIKWAEQNAAESGG--SFELLH-----DPVKAVKDADVIYTDVW 232 (315)
T ss_dssp CHHHHHHHHHHHH-----TTCEEEEECCTTCCCCHHHHHHHHHHHHHHTC--EEEEES-----CHHHHTTTCSEEEECCC
T ss_pred cchHHHHHHHHHH-----CCCEEEEECCccccCCHHHHHHHHHHHHHcCC--eEEEEe-----CHHHHhCCCCEEEEcce
Confidence 2455666666554 37899999976544455566667777778773 465553 56788999999776 77
No 68
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=56.68 E-value=1.2e+02 Score=27.65 Aligned_cols=121 Identities=4% Similarity=-0.069 Sum_probs=77.1
Q ss_pred cCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC-C---------CCCCCCCCEEEEEecCCCccChHHH
Q 016925 220 SCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-P---------LERSTEYPAIISVAQFRPEKAHPLQ 287 (380)
Q Consensus 220 ~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~-~---------~~~~~~~~~il~VGRl~p~K~~d~l 287 (380)
+.+|.|+. .++...+.+.+... +-|| |+-+ ....|. . .....++..|.+||-. +| .+
T Consensus 93 ~~~D~iviR~~~~~~~~~lA~~~~----vPVI-Na~~-~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~---~~--rv 161 (307)
T 2i6u_A 93 RYVDAIVWRTFGQERLDAMASVAT----VPVI-NALS-DEFHPCQVLADLQTIAERKGALRGLRLSYFGDG---AN--NM 161 (307)
T ss_dssp HHEEEEEEECSSHHHHHHHHHHCS----SCEE-ESCC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCT---TS--HH
T ss_pred HhCCEEEEecCChhHHHHHHhhCC----CCEE-cCCC-CCcCccHHHHHHHHHHHHhCCcCCeEEEEECCC---Cc--Cc
Confidence 44688774 56667777776543 3355 4544 444441 0 0011245789999975 22 56
Q ss_pred HHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ec
Q 016925 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KW 363 (380)
Q Consensus 288 i~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~ 363 (380)
.+.+...... -+..+.++|........+..+.+++.+++.|. .|.+.- ++.+.+..||+..+ .|
T Consensus 162 a~Sl~~~~~~-----~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~--~~~~~~-----d~~eav~~aDvvy~~~w 226 (307)
T 2i6u_A 162 AHSLLLGGVT-----AGIHVTVAAPEGFLPDPSVRAAAERRAQDTGA--SVTVTA-----DAHAAAAGADVLVTDTW 226 (307)
T ss_dssp HHHHHHHHHH-----TTCEEEEECCTTSCCCHHHHHHHHHHHHHHTC--CEEEES-----CHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHH-----CCCEEEEECCccccCCHHHHHHHHHHHHHcCC--eEEEEE-----CHHHHhcCCCEEEecce
Confidence 6666666655 37899999976544455556667778878874 466553 56788999999777 77
No 69
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=54.69 E-value=1.3e+02 Score=27.56 Aligned_cols=120 Identities=13% Similarity=-0.013 Sum_probs=77.1
Q ss_pred cCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC-C---------CCCCCCCCEEEEEecCCCccChHHH
Q 016925 220 SCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-P---------LERSTEYPAIISVAQFRPEKAHPLQ 287 (380)
Q Consensus 220 ~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~-~---------~~~~~~~~~il~VGRl~p~K~~d~l 287 (380)
+.+|.|+. .++...+++.+... +-|| |+-+ ....|. . .....+...|.+||-.. .+
T Consensus 100 ~~~D~iviR~~~~~~~~~lA~~~~----vPVI-Na~~-~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~------~v 167 (321)
T 1oth_A 100 SMADAVLARVYKQSDLDTLAKEAS----IPII-NGLS-DLYHPIQILADYLTLQEHYSSLKGLTLSWIGDGN------NI 167 (321)
T ss_dssp HHCSEEEEECSCHHHHHHHHHHCS----SCEE-ESCC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCSS------HH
T ss_pred HhCCEEEEeCCChhHHHHHHHhCC----CCEE-cCCC-CCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCch------hh
Confidence 45798886 67777777776543 3355 4544 444441 0 00113457899999752 35
Q ss_pred HHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ec
Q 016925 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KW 363 (380)
Q Consensus 288 i~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~ 363 (380)
.+.+...... -+..+.++|........+..+.+++.+++.|. .|...- ++.+.+..||+..+ .|
T Consensus 168 a~Sl~~~~~~-----~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~--~~~~~~-----d~~eav~~aDvvy~d~w 232 (321)
T 1oth_A 168 LHSIMMSAAK-----FGMHLQAATPKGYEPDASVTKLAEQYAKENGT--KLLLTN-----DPLEAAHGGNVLITDTW 232 (321)
T ss_dssp HHHHHTTTGG-----GTCEEEEECCTTCCCCHHHHHHHHHHHHHHTC--CEEEES-----CHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHH-----cCCeEEEECCccccCCHHHHHHHHHHHHHcCC--eEEEEE-----CHHHHhccCCEEEEecc
Confidence 6666666554 37899999976444455556677777777774 466553 56788999999888 55
No 70
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=52.92 E-value=44 Score=30.52 Aligned_cols=130 Identities=12% Similarity=0.069 Sum_probs=73.0
Q ss_pred cCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----C------CCCCCCCCEEEEEecCCCccChHHH
Q 016925 220 SCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----P------LERSTEYPAIISVAQFRPEKAHPLQ 287 (380)
Q Consensus 220 ~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----~------~~~~~~~~~il~VGRl~p~K~~d~l 287 (380)
+.+|.|+. .++...+.+.++.. +-|| |+-|.+...|. . .....++..|.+||-+.. -.+
T Consensus 95 ~~~D~iviR~~~~~~~~~lA~~~~----vPVI-Nag~g~~~HPtQ~LaDl~Ti~e~~g~l~glkva~vGD~~~----~rv 165 (306)
T 4ekn_B 95 GYADIIVLRHPSEGAARLASEYSQ----VPII-NAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKY----GRT 165 (306)
T ss_dssp HHCSEEEEECSSTTHHHHHHHHCS----SCEE-ESCSSSSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCTTT----CHH
T ss_pred HhCcEEEEEcCChHHHHHHHHhCC----CCEE-eCCCCCCcCcHHHHHHHHHHHHHhCCcCCCEEEEEcCCCC----CcH
Confidence 45788875 55666666666543 2244 66554444441 0 001234678999995531 135
Q ss_pred HHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ech-h
Q 016925 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KWQ-L 365 (380)
Q Consensus 288 i~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~~-~ 365 (380)
.+.+....... ++.++.+++....... +++.+.+++.|. .|...- ++.+.+..||+..+ .|+ |
T Consensus 166 a~Sl~~~~~~~----~G~~v~~~~P~~~~~~----~~~~~~~~~~g~--~~~~~~-----d~~eav~~aDvvy~~~~q~e 230 (306)
T 4ekn_B 166 VHSLVYALSLF----ENVEMYFVSPKELRLP----KDIIEDLKAKNI--KFYEKE-----SLDDLDDDIDVLYVTRIQKE 230 (306)
T ss_dssp HHHHHHHHHTS----SSCEEEEECCGGGCCC----HHHHHHHHHTTC--CEEEES-----CGGGCCTTCSEEEECCCCGG
T ss_pred HHHHHHHHHhc----CCCEEEEECCcccccC----HHHHHHHHHcCC--EEEEEc-----CHHHHhcCCCEEEeCCcccc
Confidence 55555554432 5889999996432222 345555666553 355543 34567889999665 564 4
Q ss_pred hH---HHHHHH
Q 016925 366 VY---DEFLKL 373 (380)
Q Consensus 366 ~~---~~~~~~ 373 (380)
.| .+|.+.
T Consensus 231 r~~~~~e~~~~ 241 (306)
T 4ekn_B 231 RFPDPNEYEKV 241 (306)
T ss_dssp GCCSHHHHHHH
T ss_pred cCCCHHHHHHh
Confidence 34 455543
No 71
>3lzd_A DPH2; diphthamide biosynthesis, radical SAM enzyme, gene triplicat iron-sulfur cluster, biosynthetic protein; 2.10A {Pyrococcus horikoshii} PDB: 3lzc_A
Probab=45.50 E-value=23 Score=33.37 Aligned_cols=56 Identities=4% Similarity=-0.005 Sum_probs=45.9
Q ss_pred CCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe
Q 016925 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM 361 (380)
Q Consensus 304 ~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~ 361 (380)
+.-=+|+|.-......+..+.|++++++.|....+..+|.++.+.|..+ . .|+||+
T Consensus 265 ~~~GIIvgTLg~Q~~~~~~~~L~~ll~~~Gkk~y~i~vg~inp~KLanF-~-iD~fV~ 320 (378)
T 3lzd_A 265 KKFGVIVSIKKGQLRLAEAKRIVKLLKKHGREARLIVMNDVNYHKLEGF-P-FEAYVV 320 (378)
T ss_dssp CEEEEEEECSTTTCCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHTTS-C-CSEEEE
T ss_pred CEEEEEEeCCccCCCHHHHHHHHHHHHHcCCcEEEEEeCCCCHHHHhCC-C-CCEEEE
Confidence 3344888865545667788999999999999999999999999999877 4 999886
No 72
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=44.16 E-value=13 Score=24.57 Aligned_cols=22 Identities=36% Similarity=0.635 Sum_probs=17.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHH
Q 016925 3 PYGILIWAVITAVLASILILAS 24 (380)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~ 24 (380)
+.++-+|-++.++++.+++|+-
T Consensus 7 ~~~vp~wiIi~svl~GLllL~l 28 (54)
T 2knc_A 7 ERAIPIWWVLVGVLGGLLLLTI 28 (54)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHH
Confidence 4567789999999988887764
No 73
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=42.85 E-value=49 Score=23.14 Aligned_cols=63 Identities=11% Similarity=0.092 Sum_probs=45.7
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEE-
Q 016925 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFT- 360 (380)
Q Consensus 282 K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~- 360 (380)
..-+.+.+||..+ +.. . |--. .++|+. .++++++..+++.++..-
T Consensus 7 ~~~eel~eAFr~f-~dg----~-------G~It-------~~eLr~---------------~lt~eevd~~i~~~d~~dg 52 (75)
T 1h8b_A 7 DTAEQVIASFRIL-ASD----K-------PYIL-------AEELRR---------------ELPPDQAQYCIKRMPAYSG 52 (75)
T ss_dssp STHHHHHHHHHHH-TTS----C-------SSBC-------HHHHHH---------------HSCHHHHHHHHHHSCSCCC
T ss_pred CCHHHHHHHHHHH-hcC----C-------CCcC-------HHHHHh---------------cCCHHHHHHHHHhcCcccC
Confidence 4568899999998 542 1 1111 256666 378999999999999532
Q ss_pred ---eechhhHHHHHHHHHhhc
Q 016925 361 ---MKWQLVYDEFLKLYLQKS 378 (380)
Q Consensus 361 ---~~~~~~~~~~~~~~~~~~ 378 (380)
-.....|.+|.+....+|
T Consensus 53 ~~~~dG~idY~eF~~~m~~~~ 73 (75)
T 1h8b_A 53 PGSVPGALDYAAFSSALYGES 73 (75)
T ss_dssp SSCCTTCBCHHHHHHHHTCCS
T ss_pred CCCCCCcCcHHHHHHHHhccC
Confidence 468899999999887765
No 74
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=42.48 E-value=35 Score=25.69 Aligned_cols=61 Identities=11% Similarity=0.033 Sum_probs=40.3
Q ss_pred EEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeechhh--HHHHHH
Q 016925 307 LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLV--YDEFLK 372 (380)
Q Consensus 307 LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~~~~--~~~~~~ 372 (380)
|++-|.|- ++.=..+.+++.+++.|++-.|.-.+. .++.+....+|+++...+.. ++++-+
T Consensus 7 ll~Cg~G~--sTS~l~~k~~~~~~~~gi~~~i~a~~~---~~~~~~~~~~Dvil~~pqv~~~~~~~~~ 69 (106)
T 1e2b_A 7 YLFSSAGM--STSLLVSKMRAQAEKYEVPVIIEAFPE---TLAGEKGQNADVVLLGPQIAYMLPEIQR 69 (106)
T ss_dssp EEECSSST--TTHHHHHHHHHHHHHSCCSEEEEEECS---SSTTHHHHHCSEEEECTTSGGGHHHHHH
T ss_pred EEECCCch--hHHHHHHHHHHHHHHCCCCeEEEEecH---HHHHhhccCCCEEEEccchhhhHHHHHH
Confidence 34445442 233456799999999999866655442 35666788999999877655 444433
No 75
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=42.38 E-value=95 Score=32.52 Aligned_cols=91 Identities=13% Similarity=-0.012 Sum_probs=60.4
Q ss_pred CCEEEEEecCCCccChHH-HHHHHHHHH---HHc-----cC-C---CCCCeEEEEcCCCCCCCHHHHHHHHHHHHhc---
Q 016925 269 YPAIISVAQFRPEKAHPL-QLEAFSVAL---RKL-----DA-D---LPRPRLQFVGSCRNKSDEERLQSLKDKSIEL--- 332 (380)
Q Consensus 269 ~~~il~VGRl~p~K~~d~-li~A~~~l~---~~~-----~~-~---~~~~~LvIvG~g~~~~~~~~~~~L~~la~~l--- 332 (380)
.-+++++=|+...|+..+ ++....++. ... ++ . .....++++|..-. .. .....+-+++.+.
T Consensus 600 sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP-~y-~~aK~iIklI~~va~~ 677 (879)
T 1ygp_A 600 TLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAP-GY-YMAKLIIKLINCVADI 677 (879)
T ss_dssp CEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCT-TC-HHHHHHHHHHHHHHHH
T ss_pred eeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCC-Cc-HHHHHHHHHHHHHHHH
Confidence 457899999999999999 677766543 220 00 0 13466777776521 12 2334555555544
Q ss_pred -----CCCC--cEEEccCCCHHHHHHHHhhccEEEe
Q 016925 333 -----KVDG--NVEFYKNLLYRSVLTIFMHLFVFTM 361 (380)
Q Consensus 333 -----gl~~--~V~f~G~v~~~el~~ly~~a~vf~~ 361 (380)
.+.+ +|.|+.+-+-+--..++..||+-..
T Consensus 678 iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseq 713 (879)
T 1ygp_A 678 VNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEH 713 (879)
T ss_dssp HTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEE
T ss_pred hccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhh
Confidence 3667 8999998877788899999999653
No 76
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=41.66 E-value=16 Score=22.77 Aligned_cols=22 Identities=36% Similarity=0.635 Sum_probs=16.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHH
Q 016925 3 PYGILIWAVITAVLASILILAS 24 (380)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~ 24 (380)
+.++-+|-++.++++.+++|+-
T Consensus 5 ~~~vp~wiIi~s~l~GLllL~l 26 (42)
T 2k1a_A 5 ERAIPIWWVLVGVLGGLLLLTI 26 (42)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCcchHHHHHHHHHHHHHHHH
Confidence 3456688889999888888764
No 77
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=39.41 E-value=1.5e+02 Score=26.60 Aligned_cols=92 Identities=9% Similarity=-0.081 Sum_probs=60.5
Q ss_pred CCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEcc-----C
Q 016925 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK-----N 343 (380)
Q Consensus 269 ~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G-----~ 343 (380)
+..++-+|-=+..++-..+++.|-.+.. .++.++.++..... ...+|.+..++..+++|.. .|..+. .
T Consensus 26 ~g~l~iiGGgedk~~~~~i~~~~v~lag-----g~~~~I~~IptAs~-~~~~~~~~~~~~f~~lG~~-~v~~L~i~~r~~ 98 (291)
T 3en0_A 26 QPAILIIGGAEDKVHGREILQTFWSRSG-----GNDAIIGIIPSASR-EPLLIGERYQTIFSDMGVK-ELKVLDIRDRAQ 98 (291)
T ss_dssp SCCEEEECSSCCSSSCCHHHHHHHHHTT-----GGGCEEEEECTTCS-SHHHHHHHHHHHHHHHCCS-EEEECCCCSGGG
T ss_pred CceEEEEECCCCccChHHHHHHHHHHcC-----CCCCeEEEEeCCCC-ChHHHHHHHHHHHHHcCCC-eeEEEEecCccc
Confidence 3456666654443344455666655533 25689999886543 2346777888888899984 454442 2
Q ss_pred CCHHHHHHHHhhccEEEeechhhH
Q 016925 344 LLYRSVLTIFMHLFVFTMKWQLVY 367 (380)
Q Consensus 344 v~~~el~~ly~~a~vf~~~~~~~~ 367 (380)
.+++++.+.+..||+......+.|
T Consensus 99 a~~~~~~~~l~~ad~I~v~GGnt~ 122 (291)
T 3en0_A 99 GDDSGYRLFVEQCTGIFMTGGDQL 122 (291)
T ss_dssp GGCHHHHHHHHHCSEEEECCSCHH
T ss_pred cCCHHHHHHHhcCCEEEECCCCHH
Confidence 345678889999999998888876
No 78
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=38.52 E-value=2.1e+02 Score=26.57 Aligned_cols=120 Identities=8% Similarity=-0.062 Sum_probs=73.5
Q ss_pred HHhcCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----------CCC--C-CCCCCEEEEEecCCCc
Q 016925 217 LVGSCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----------PLE--R-STEYPAIISVAQFRPE 281 (380)
Q Consensus 217 ~~~~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----------~~~--~-~~~~~~il~VGRl~p~ 281 (380)
.+.+.+|.|+. .++...+.+.+..+ +-|| |+-+ +...|. ... . ..++..|.+||-+
T Consensus 92 vLs~y~D~IviR~~~~~~~~~lA~~~~----vPVI-Nag~-~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~--- 162 (355)
T 4a8p_A 92 VLSRLVDILMARVERHHSIVDLANCAT----IPVI-NGMS-DYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDA--- 162 (355)
T ss_dssp HHTTTCSEEEEECSSHHHHHHHHHHCS----SCEE-ECCC-SSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCC---
T ss_pred HHHHhCCEEEEecCcHHHHHHHHHhCC----CCEE-eCCC-CCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCC---
Confidence 34467898885 56666677766543 2345 5544 334431 000 1 1235689999976
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe
Q 016925 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM 361 (380)
Q Consensus 282 K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~ 361 (380)
-.+...+...... -+..+.++|........+..+.+++.+++.|. .|..+- ++. .+..||+..+
T Consensus 163 ---~rva~Sl~~~~~~-----~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~--~v~~~~-----d~~-av~~aDVVyt 226 (355)
T 4a8p_A 163 ---TQVCFSLGLITTK-----MGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGG--SFLVTD-----DAS-SVEGADFLYT 226 (355)
T ss_dssp ---CHHHHHHHHHHHH-----TTCEEEEECCTTSSCCHHHHHHHHHHHHHHSC--EEEEEC-----CGG-GGTTCSEEEE
T ss_pred ---chhHHHHHHHHHH-----cCCEEEEECCCccCCCHHHHHHHHHHHHHcCC--eEEEEC-----CHH-HHcCCCEEEe
Confidence 3455555555544 36899999976544555666777777777763 466554 344 7889999776
No 79
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=38.46 E-value=21 Score=19.83 Aligned_cols=17 Identities=41% Similarity=0.720 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 016925 8 IWAVITAVLASILILAS 24 (380)
Q Consensus 8 ~~~~~~~~~~~~~~~~~ 24 (380)
||-||....|..-.||-
T Consensus 5 iweviaglvalltflaf 21 (32)
T 2lx0_A 5 IWEVIAGLVALLTFLAF 21 (32)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 79999888877766653
No 80
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=38.37 E-value=91 Score=30.38 Aligned_cols=92 Identities=9% Similarity=-0.012 Sum_probs=57.6
Q ss_pred ccChHHHHHHHHH-HHHH--c--cCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhh
Q 016925 281 EKAHPLQLEAFSV-ALRK--L--DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMH 355 (380)
Q Consensus 281 ~K~~d~li~A~~~-l~~~--~--~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~ 355 (380)
..|++.+++|+.. +.+. . +...++-.+-|+|+-....+ ..+|+++.+++|++-.+.|.|.-+-+|+..+- +
T Consensus 192 ~~G~~~a~~al~~~l~~~~~~~~~~~~~~~~VNIiG~~~~~gD---~~eik~lL~~~Gi~v~~~~~g~~t~~ei~~~~-~ 267 (492)
T 3u7q_A 192 SLGHHIANDAVRDWVLGKRDEDTTFASTPYDVAIIGDYNIGGD---AWSSRILLEEMGLRCVAQWSGDGSISEIELTP-K 267 (492)
T ss_dssp HHHHHHHHHHHHHHTTTTTTTCCCCCCCTTEEEEEEECCBTTT---THHHHHHHHHTTCEEEEEEETTCCHHHHHHGG-G
T ss_pred hHHHHHHHHHHHHHHhhhcccccccCCCCCcEEEECCCCChhh---HHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhh-c
Confidence 4568888888766 4332 0 01223567888885422222 36899999999999888899988888887665 4
Q ss_pred ccEEEeechhhHHHHHHHHHhh
Q 016925 356 LFVFTMKWQLVYDEFLKLYLQK 377 (380)
Q Consensus 356 a~vf~~~~~~~~~~~~~~~~~~ 377 (380)
|.+-+.. ...++...-.||++
T Consensus 268 A~~niv~-~~~~~~~~A~~Le~ 288 (492)
T 3u7q_A 268 VKLNLVH-CYRSMNYISRHMEE 288 (492)
T ss_dssp CSEEEES-CHHHHHHHHHHHHH
T ss_pred CcEEEEE-ChHHHHHHHHHHHH
Confidence 5543332 22255555555553
No 81
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=37.81 E-value=2e+02 Score=26.67 Aligned_cols=122 Identities=9% Similarity=0.025 Sum_probs=75.9
Q ss_pred cCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC-------CC----C-CCCCCCEEEEEecCCCccChH
Q 016925 220 SCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-------PL----E-RSTEYPAIISVAQFRPEKAHP 285 (380)
Q Consensus 220 ~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~-------~~----~-~~~~~~~il~VGRl~p~K~~d 285 (380)
+.+|.|+. .++...+++.+...+ -|| ||-. +...|. .. . ...+.-.|.+||-+ ||
T Consensus 124 ~~~D~IviR~~~~~~~~~la~~s~v----PVI-NG~g-~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~---~~-- 192 (358)
T 4h31_A 124 RMYDGIQYRGFGQAIVEELGAFAGV----PVW-NGLT-DEFHPTQILADFLTMLEHSQGKALADIQFAYLGDA---RN-- 192 (358)
T ss_dssp HHCSEEEEECSCHHHHHHHHHHSSS----CEE-ESCC-SSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCT---TS--
T ss_pred ccCceeEecccchhHHHHhhhhccC----ceE-CCCC-cCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCC---Cc--
Confidence 45788884 677777777775542 244 5643 333331 00 0 01234589999975 33
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ech
Q 016925 286 LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KWQ 364 (380)
Q Consensus 286 ~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~~ 364 (380)
.+...+....... +..+.++|........+..+.+++.+.+.|. +|.++- ++.+.+..||+..+ .|+
T Consensus 193 ~va~S~~~~~~~~-----g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~--~v~~~~-----d~~eav~~aDvvyt~~w~ 260 (358)
T 4h31_A 193 NVGNSLMVGAAKM-----GMDIRLVGPQAYWPDEELVAACQAIAKQTGG--KITLTE-----NVAEGVQGCDFLYTDVWV 260 (358)
T ss_dssp HHHHHHHHHHHHH-----TCEEEEESCGGGSCCHHHHHHHHHHHHHHTC--EEEEES-----CHHHHHTTCSEEEECCSS
T ss_pred ccchHHHHHHHhc-----CceEEEeCCcccCCCHHHHHHHHHHHHHcCC--cceecc-----CHHHHhccCcEEEEEEEE
Confidence 4555555555543 6899999965444456677788888888763 466654 46788999999654 665
No 82
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=37.17 E-value=2.1e+02 Score=25.52 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=28.6
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCC
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~ 76 (380)
|||+++.+.. . |=.-...-++.+|++..|+.+++++++.
T Consensus 1 mkILii~~~~--~-GD~i~~~p~l~~Lk~~~P~~~i~~l~~~ 39 (348)
T 1psw_A 1 MKILVIGPSW--V-GDMMMSQSLYRTLQARYPQAIIDVMAPA 39 (348)
T ss_dssp CEEEEECCSS--H-HHHHHHHHHHHHHHHHSTTCEEEEEECG
T ss_pred CeEEEEeccc--c-CHHHHHHHHHHHHHHHCCCCEEEEEECc
Confidence 6898887632 1 3333677888999998888999998864
No 83
>2kv5_A FST, putative uncharacterized protein RNAI; toxin-antitoxin, bacterial, toxin; NMR {Enterococcus faecalis}
Probab=36.88 E-value=63 Score=18.86 Aligned_cols=21 Identities=14% Similarity=0.243 Sum_probs=16.6
Q ss_pred HHHHHHHHHHhHhhhcCCCCc
Q 016925 15 VLASILILASHVHNARRNRTT 35 (380)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~ 35 (380)
+...++.|.+|.-|-|+|+++
T Consensus 13 vVGvvl~L~d~WLn~r~~~~~ 33 (33)
T 2kv5_A 13 FVGLVLEMISRVLDEEDDSRK 33 (33)
T ss_dssp HHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHHHHHccccccCC
Confidence 445678899999999998764
No 84
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=36.55 E-value=30 Score=26.31 Aligned_cols=52 Identities=13% Similarity=0.013 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeechhh--HHHHHHHH
Q 016925 320 ERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLV--YDEFLKLY 374 (380)
Q Consensus 320 ~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~~~~--~~~~~~~~ 374 (380)
=..+++++.+++.|++ |.... .+..++.+.+...|+++...|.. |+++-+..
T Consensus 21 llv~km~~~a~~~gi~--v~i~a-~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~ 74 (108)
T 3nbm_A 21 QLANAINEGANLTEVR--VIANS-GAYGAHYDIMGVYDLIILAPQVRSYYREMKVDA 74 (108)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEE-EETTSCTTTGGGCSEEEECGGGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCc--eEEEE-cchHHHHhhccCCCEEEEChHHHHHHHHHHHHh
Confidence 3557999999999987 44422 12234566778899999988877 67766554
No 85
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=35.66 E-value=2.8e+02 Score=26.32 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=29.1
Q ss_pred CcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCCC
Q 016925 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (380)
Q Consensus 34 ~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~~ 77 (380)
+++|.++ |+. ..|--.=++++++.|+++.++++|++++...
T Consensus 9 ~~~vv~~-p~p--~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 9 NSELIFI-PAP--GIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp CEEEEEE-CCS--STTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCEEEEE-cCc--ccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 4677777 433 2466677889999999982238888887553
No 86
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=35.51 E-value=2.5e+02 Score=25.38 Aligned_cols=120 Identities=8% Similarity=0.029 Sum_probs=73.5
Q ss_pred cCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----------CCCCCCC-CCEEEEEecCCCccChHH
Q 016925 220 SCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----------PLERSTE-YPAIISVAQFRPEKAHPL 286 (380)
Q Consensus 220 ~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----------~~~~~~~-~~~il~VGRl~p~K~~d~ 286 (380)
+.+|.|+. .++...+.+.+...+ -|| |+-| ....|. ......+ +..|.+||-. . .
T Consensus 90 ~~~D~iviR~~~~~~~~~lA~~~~v----PVI-Nag~-~~~HPtQaLaDl~Ti~e~~g~l~~gl~va~vGD~---~---~ 157 (307)
T 3tpf_A 90 AMVDFVMMRVNKHETLLEFARYSKA----PVI-NALS-ELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDS---N---N 157 (307)
T ss_dssp HHSSEEEEECSCHHHHHHHHHHCSS----CEE-EEEC-SSCCHHHHHHHHHHHHHTTCCGGGCCEEEEESCS---S---H
T ss_pred HhCCEEEEecCChHHHHHHHHhCCC----CEE-eCCC-CCcCcHHHHHHHHHHHHHhCCCCCCCEEEEEcCC---C---c
Confidence 45798885 667777777775432 245 5544 234431 0011124 5789999963 3 3
Q ss_pred HHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ec
Q 016925 287 QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KW 363 (380)
Q Consensus 287 li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~ 363 (380)
+...+....... +.++.++|........+..+.+++.+++.|. .|...- ++.+.+..||+..+ .|
T Consensus 158 va~Sl~~~~~~~-----G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~--~~~~~~-----d~~eav~~aDvvyt~~w 223 (307)
T 3tpf_A 158 MCNSWLITAAIL-----GFEISIAMPKNYKISPEIWEFAMKQALISGA--KISLGY-----DKFEALKDKDVVITDTW 223 (307)
T ss_dssp HHHHHHHHHHHH-----TCEEEEECCTTCCCCHHHHHHHHHHHHHHTC--EEEEES-----CHHHHHTTCSEEEECCS
T ss_pred cHHHHHHHHHHc-----CCEEEEECCCccCCCHHHHHHHHHHHHHcCC--eEEEEc-----CHHHHhcCCCEEEecCc
Confidence 555555555443 6799999975444455556667777777763 465544 46688999999766 44
No 87
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=35.47 E-value=90 Score=28.45 Aligned_cols=125 Identities=12% Similarity=0.107 Sum_probs=70.9
Q ss_pred HHhcCCCEEEE--cCHHHHHHHHHHh-CCCCceEEecCCCCCCCCCCC----------CCCCCCCCCEEEEEecCCCccC
Q 016925 217 LVGSCADLAMV--NSSWTQSHIEKLW-GIPDRIKRVYPPCDTSGLQVL----------PLERSTEYPAIISVAQFRPEKA 283 (380)
Q Consensus 217 ~~~~~ad~ii~--~S~~~~~~i~~~~-~~~~k~~vi~~gvd~~~~~~~----------~~~~~~~~~~il~VGRl~p~K~ 283 (380)
.+.+.+|.|+. .++...+.+.+.. .+ -|| |+-|-+...|. .....-+...|.+||-+..
T Consensus 94 vls~~~D~iviR~~~~~~~~~la~~~~~v----PVI-Nag~G~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~--- 165 (310)
T 3csu_A 94 VISTYVDAIVMRHPQEGAARLATEFSGNV----PVL-NAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKY--- 165 (310)
T ss_dssp HHTTTCSEEEEEESSTTHHHHHHHHCTTC----CEE-EEEETTSCCHHHHHHHHHHHHHHHSCSSSCEEEEESCTTT---
T ss_pred HHHHhCCEEEEECCChhHHHHHHHhcCCC----CEE-cCccCCCCCchHHHHHHHHHHHHhCCcCCcEEEEECCCCC---
Confidence 34567898884 6677777777754 32 244 65543334431 0001124578999995432
Q ss_pred hHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-e
Q 016925 284 HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-K 362 (380)
Q Consensus 284 ~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~ 362 (380)
-.+.+.+....... ++..+.++|....... +++.+.+++.|. .+..+- ++.+.+..||+..+ .
T Consensus 166 -~rva~Sl~~~~~~~----~g~~v~~~~P~~~~~~----~~~~~~~~~~g~--~~~~~~-----d~~eav~~aDvvyt~~ 229 (310)
T 3csu_A 166 -GRTVHSLTQALAKF----DGNRFYFIAPDALAMP----QYILDMLDEKGI--AWSLHS-----SIEEVMAEVDILYMTR 229 (310)
T ss_dssp -CHHHHHHHHHHHTS----SSCEEEEECCGGGCCC----HHHHHHHHHTTC--CEEECS-----CGGGTTTTCSEEEECC
T ss_pred -CchHHHHHHHHHhC----CCCEEEEECCcccccC----HHHHHHHHHcCC--eEEEEc-----CHHHHhcCCCEEEECC
Confidence 23455555554442 6899999996533222 345555666664 366553 34577899999766 5
Q ss_pred chh
Q 016925 363 WQL 365 (380)
Q Consensus 363 ~~~ 365 (380)
|++
T Consensus 230 ~q~ 232 (310)
T 3csu_A 230 VQK 232 (310)
T ss_dssp ---
T ss_pred ccc
Confidence 874
No 88
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=35.20 E-value=2.2e+02 Score=26.20 Aligned_cols=117 Identities=9% Similarity=-0.075 Sum_probs=71.4
Q ss_pred cCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----------CCC--C-CCCCCEEEEEecCCCccCh
Q 016925 220 SCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----------PLE--R-STEYPAIISVAQFRPEKAH 284 (380)
Q Consensus 220 ~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----------~~~--~-~~~~~~il~VGRl~p~K~~ 284 (380)
+.+|.|+. .++...+++.+..+ +-|| |+-+ +...|. ... . ..++..|.+||-+
T Consensus 117 ~~~D~IviR~~~~~~~~~lA~~~~----vPVI-Nag~-~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~------ 184 (339)
T 4a8t_A 117 RLVDILMARVERHHSIVDLANCAT----IPVI-NGMS-DYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDA------ 184 (339)
T ss_dssp HHCSEEEEECSSHHHHHHHHHHCS----SCEE-ECCC-SSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSC------
T ss_pred HhCCEEEEecCcHHHHHHHHHhCC----CCEE-ECCC-CCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCC------
Confidence 45798875 56666677776543 2355 5544 334431 001 1 1235689999976
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe
Q 016925 285 PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM 361 (380)
Q Consensus 285 d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~ 361 (380)
-.+...+...... -+..+.++|........+..+.+++.+++.|. .|..+- ++. .+..||+..+
T Consensus 185 ~rva~Sl~~~~~~-----~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~--~v~~~~-----d~~-av~~aDvvyt 248 (339)
T 4a8t_A 185 TQVCFSLGLITTK-----MGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGG--SFLVTD-----DAS-SVEGADFLYT 248 (339)
T ss_dssp CHHHHHHHHHHHH-----TTCEEEEECCTTSSCCHHHHHHHHHHHHHHCC--EEEEEC-----CGG-GGTTCSEEEE
T ss_pred chhHHHHHHHHHH-----cCCEEEEECCcccCCCHHHHHHHHHHHHHcCC--EEEEEC-----Chh-HHcCCCEEEe
Confidence 2445555555544 36899999976444555666777777777763 466554 344 7889999776
No 89
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=34.45 E-value=54 Score=33.56 Aligned_cols=133 Identities=11% Similarity=0.066 Sum_probs=78.7
Q ss_pred hcCCCEEEEcCHHHHHHHHHHhCCC-CceEEecCCCCCC-CCC-CCC-----------CCCCCCCCEEEEEecCCCcc--
Q 016925 219 GSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTS-GLQ-VLP-----------LERSTEYPAIISVAQFRPEK-- 282 (380)
Q Consensus 219 ~~~ad~ii~~S~~~~~~i~~~~~~~-~k~~vi~~gvd~~-~~~-~~~-----------~~~~~~~~~il~VGRl~p~K-- 282 (380)
.+..|.+++.|+++.+.+.+.++.. .+ ++.-|..-. .+. ... .....++++|||.-.+++..
T Consensus 476 ~~~~D~~~~~s~~~~~~~~~~f~~~~~~--i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~ 553 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFRSAFWMDEER--ILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFV 553 (729)
T ss_dssp HTTCSEEEESSHHHHHHHHHHTCCCGGG--EEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCC
T ss_pred hccCCEEEeCCHHHHHHHHHHhCCCcce--EEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccc
Confidence 3578999999999999999988864 33 344454311 110 100 00123568999998877642
Q ss_pred -------ChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhh
Q 016925 283 -------AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMH 355 (380)
Q Consensus 283 -------~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~ 355 (380)
....-++.+..... +++.|++-... .+.+.....+..+.+.-... ..++.++|..
T Consensus 554 ~~~~~~~~~~~~~~~l~~~l~------~~~~li~r~Hp----------~~~~~~~~~~~~~~~~~~~~--~~di~~ll~~ 615 (729)
T 3l7i_A 554 SKGKYLFELKIDLDNLYKELG------DDYVILLRMHY----------LISNALDLSGYENFAIDVSN--YNDVSELFLI 615 (729)
T ss_dssp GGGSSCCCCTTCHHHHHHHHT------TTEEEEECCCH----------HHHTTCCCTTCTTTEEECTT--CSCHHHHHHT
T ss_pred cccccccchhhHHHHHHHHcC------CCeEEEEecCc----------chhccccccccCCcEEeCCC--CcCHHHHHHH
Confidence 11122344443322 57777776642 11211111234555654443 3478999999
Q ss_pred ccEEEeechhhHHHHH
Q 016925 356 LFVFTMKWQLVYDEFL 371 (380)
Q Consensus 356 a~vf~~~~~~~~~~~~ 371 (380)
||+++-.++-.+=+|+
T Consensus 616 aD~lITDySSv~fD~~ 631 (729)
T 3l7i_A 616 SDCLITDYSSVMFDYG 631 (729)
T ss_dssp CSEEEESSCTHHHHHG
T ss_pred hCEEEeechHHHHhHH
Confidence 9999999888888875
No 90
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=34.28 E-value=47 Score=26.71 Aligned_cols=36 Identities=11% Similarity=0.013 Sum_probs=27.3
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEc
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYT 74 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t 74 (380)
|+|+++.-+. .|..+.++-.++++|.+.| +++.++.
T Consensus 1 Mkv~IvY~S~--tGnT~~~A~~ia~~l~~~g--~~v~~~~ 36 (161)
T 3hly_A 1 MSVLIGYLSD--YGYSDRLSQAIGRGLVKTG--VAVEMVD 36 (161)
T ss_dssp -CEEEEECTT--STTHHHHHHHHHHHHHHTT--CCEEEEE
T ss_pred CEEEEEEECC--ChHHHHHHHHHHHHHHhCC--CeEEEEE
Confidence 6777776655 5899999999999999888 5555554
No 91
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=31.60 E-value=1.5e+02 Score=26.31 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=29.4
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCC
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~ 76 (380)
|||+++.+.. . |=.-+..-++.+|.+..|+.++++++..
T Consensus 1 ~~ILii~~~~--i-GD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 39 (326)
T 2gt1_A 1 MRVLIVKTSS--M-GDVLHTLPALTDAQQAIPGIKFDWVVEE 39 (326)
T ss_dssp CEEEEECCCC--H-HHHHHHHHHHHHHHHHSTTCEEEEEEEG
T ss_pred CeEEEEeccc--c-chHHhHHHHHHHHHHhCCCCEEEEEEeh
Confidence 6898887643 2 3334677888999999888999998864
No 92
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=31.43 E-value=73 Score=27.30 Aligned_cols=43 Identities=7% Similarity=0.017 Sum_probs=28.2
Q ss_pred CCCcEEEEECCCCC---CCCChhHHHHHHHHHHHHhCCCc-eEEEEc
Q 016925 32 NRTTSVAFFHPNTN---DGGGGERVLWCAVKAIQEESPDL-DCIVYT 74 (380)
Q Consensus 32 ~~~~~I~~~~p~~~---~~GG~ervl~~la~~L~~~g~~~-~v~v~t 74 (380)
|.+|||+++.-+.. ..|=...++-.+++.+.+.++++ +|.++-
T Consensus 2 ~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~id 48 (223)
T 3u7i_A 2 NAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQIN 48 (223)
T ss_dssp -CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 66799999976664 33334445556677788877677 777664
No 93
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=30.16 E-value=1.8e+02 Score=27.07 Aligned_cols=83 Identities=7% Similarity=0.008 Sum_probs=53.4
Q ss_pred CCCE--EEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCC-CCCCCHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016925 268 EYPA--IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSC-RNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (380)
Q Consensus 268 ~~~~--il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g-~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v 344 (380)
++.. |.+||-+..-- -.+...+...... -+..+.+++.. ......++.+.+++.+++.|. .|.+.-
T Consensus 189 ~glkvvva~vGDl~~~~--nrva~Sl~~~~~~-----~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~--~v~~~~-- 257 (359)
T 1zq6_A 189 RGKKYVLTWTYHPKPLN--TAVANSALTIATR-----MGMDVTLLCPTPDYILDERYMDWAAQNVAESGG--SLQVSH-- 257 (359)
T ss_dssp TTCEEEEEECCCSSCCC--SHHHHHHHHHHHH-----TTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSC--EEEEEC--
T ss_pred cCCeeEEEEEecccccc--cchHHHHHHHHHH-----cCCEEEEEcCccccCCCHHHHHHHHHHHHHcCC--eEEEEC--
Confidence 3456 88999766421 2444555555444 26899999964 333445666777888878763 465544
Q ss_pred CHHHHHHHHhhccEEEe-ech
Q 016925 345 LYRSVLTIFMHLFVFTM-KWQ 364 (380)
Q Consensus 345 ~~~el~~ly~~a~vf~~-~~~ 364 (380)
++.+.+..||+..+ .|+
T Consensus 258 ---d~~eav~~aDvVyt~~w~ 275 (359)
T 1zq6_A 258 ---DIDSAYAGADVVYAKSWG 275 (359)
T ss_dssp ---CHHHHHTTCSEEEEECCC
T ss_pred ---CHHHHhcCCCEEEECCcc
Confidence 46688999999654 663
No 94
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=29.24 E-value=2.3e+02 Score=25.90 Aligned_cols=79 Identities=5% Similarity=-0.085 Sum_probs=50.6
Q ss_pred CCCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCC--CCHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016925 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK--SDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (380)
Q Consensus 268 ~~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~--~~~~~~~~L~~la~~lgl~~~V~f~G~v~ 345 (380)
++..|.+||-+ || .+.+.+....... +..+.++|..... ...+..+++++.+++.+-...|...-
T Consensus 160 ~gl~va~vGD~---~~--~va~Sl~~~~~~~-----G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~--- 226 (328)
T 3grf_A 160 KGIKFAYCGDS---MN--NVTYDLMRGCALL-----GMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH--- 226 (328)
T ss_dssp GGCCEEEESCC---SS--HHHHHHHHHHHHH-----TCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES---
T ss_pred CCcEEEEeCCC---Cc--chHHHHHHHHHHc-----CCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc---
Confidence 34679999976 23 4556666555543 6899999965433 34455666777766622224566553
Q ss_pred HHHHHHHHhhccEEEe
Q 016925 346 YRSVLTIFMHLFVFTM 361 (380)
Q Consensus 346 ~~el~~ly~~a~vf~~ 361 (380)
++.+.+..||+..+
T Consensus 227 --d~~eav~~aDvvyt 240 (328)
T 3grf_A 227 --DCKKGCEGVDVVYT 240 (328)
T ss_dssp --SHHHHHTTCSEEEE
T ss_pred --CHHHHhcCCCEEEe
Confidence 56788999999775
No 95
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=28.50 E-value=1.2e+02 Score=22.64 Aligned_cols=67 Identities=7% Similarity=0.029 Sum_probs=42.1
Q ss_pred CCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeechh--hHHHHHHH
Q 016925 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQL--VYDEFLKL 373 (380)
Q Consensus 303 ~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~~~--~~~~~~~~ 373 (380)
|..+.+++-+..-..+ =..+++++.+++.|++-.|.-.+ -.++...+..+|+++...+. .+++|-+.
T Consensus 3 ~~mkIlvvC~~G~~TS-ll~~kl~~~~~~~gi~~~i~~~~---~~~~~~~~~~~D~Ii~t~~l~~~~~~~~~~ 71 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTS-MLVQRIEKYAKSKNINATIEAIA---ETRLSEVVDRFDVVLLAPQSRFNKKRLEEI 71 (109)
T ss_dssp CCEEEEEESSSSCSSC-HHHHHHHHHHHHHTCSEEEEEEC---STTHHHHTTTCSEEEECSCCSSHHHHHHHH
T ss_pred CceEEEEECCChHhHH-HHHHHHHHHHHHCCCCeEEEEec---HHHHHhhcCCCCEEEECCccHHHHHHHHHH
Confidence 3455555544333344 45579999999999975555444 33676778899998875443 35555443
No 96
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=28.19 E-value=1.3e+02 Score=27.74 Aligned_cols=77 Identities=6% Similarity=0.028 Sum_probs=42.0
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe
Q 016925 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM 361 (380)
Q Consensus 282 K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~ 361 (380)
+++..+++.+....+.. .+-+++|+............+.+.+.+.+.|++-.+.-+...+.+++.+-+..+|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~----~~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii~ 309 (402)
T 1e5d_A 234 DQCTFAVQKYVEYAEQK----PTNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKACHHSQIMSEISDAGAVIV 309 (402)
T ss_dssp HHHHHHHHHHHHHHHCC----CCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETTTSCHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHhcCC----CCCcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHHCCEEEE
Confidence 45667777766655431 34566666644332223334555555555555433333444455566666788888765
Q ss_pred e
Q 016925 362 K 362 (380)
Q Consensus 362 ~ 362 (380)
.
T Consensus 310 g 310 (402)
T 1e5d_A 310 G 310 (402)
T ss_dssp E
T ss_pred E
Confidence 4
No 97
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=28.03 E-value=63 Score=28.26 Aligned_cols=49 Identities=16% Similarity=0.144 Sum_probs=25.5
Q ss_pred hHhhhcCCCCcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEcCC
Q 016925 25 HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (380)
Q Consensus 25 ~~~~~~~~~~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t~~ 76 (380)
|.|.-++++..+|+++.|..... -...++..+..++.+.| +++.++...
T Consensus 7 ~~~~~~~~~s~~Igvi~~~~~~~-~~~~~~~gi~~~a~~~g--~~~~~~~~~ 55 (289)
T 2fep_A 7 HHHHGSSKKTTTVGVIIPDISSI-FYSELARGIEDIATMYK--YNIILSNSD 55 (289)
T ss_dssp ---------CCEEEEEESCTTSH-HHHHHHHHHHHHHHHTT--CEEEEEECT
T ss_pred cccccccCCCCeEEEEeCCCCCc-hHHHHHHHHHHHHHHcC--CEEEEEeCC
Confidence 45667788899999999976432 23344445555566777 777665433
No 98
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=27.72 E-value=1e+02 Score=24.60 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=29.0
Q ss_pred CcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEc
Q 016925 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYT 74 (380)
Q Consensus 34 ~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t 74 (380)
.++|+++..+. .|..++++-.++++|.+.| +++.++.
T Consensus 4 ~~kv~IvY~S~--~GnT~~iA~~ia~~l~~~g--~~v~~~~ 40 (159)
T 3fni_A 4 ETSIGVFYVSE--YGYSDRLAQAIINGITKTG--VGVDVVD 40 (159)
T ss_dssp CCEEEEEECTT--STTHHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEEEECC--ChHHHHHHHHHHHHHHHCC--CeEEEEE
Confidence 45777777655 5899999999999999988 6666654
No 99
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=27.57 E-value=36 Score=24.71 Aligned_cols=30 Identities=7% Similarity=-0.054 Sum_probs=15.3
Q ss_pred cCCCHHHHHHHHhhccEEEeechhhHHHHHHHH
Q 016925 342 KNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLY 374 (380)
Q Consensus 342 G~v~~~el~~ly~~a~vf~~~~~~~~~~~~~~~ 374 (380)
|.++.+++..+++..| -.....|.||+.++
T Consensus 4 ~~~t~~e~~~~~~~~d---~~g~i~~~eF~~~~ 33 (108)
T 1rro_A 4 DILSAEDIAAALQECQ---DPDTFEPQKFFQTS 33 (108)
T ss_dssp GTSCHHHHHHHHHHTC---STTCCCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHcc---CCCCcCHHHHHHHH
Confidence 4445555555555555 34445555555443
No 100
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=27.46 E-value=35 Score=24.76 Aligned_cols=31 Identities=6% Similarity=-0.020 Sum_probs=23.0
Q ss_pred ccCCCHHHHHHHHhhccEEEeechhhHHHHHHHH
Q 016925 341 YKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLY 374 (380)
Q Consensus 341 ~G~v~~~el~~ly~~a~vf~~~~~~~~~~~~~~~ 374 (380)
.|.++.+++..+++..| -.....|.||+.++
T Consensus 3 ~~~~~~~e~~~l~~~~d---~~g~i~~~eF~~~~ 33 (108)
T 2kyc_A 3 TDILSPSDIAAALRDCQ---APDSFSPKKFFQIS 33 (108)
T ss_dssp TSSSCHHHHHHHHTTSC---STTTCCHHHHHHHH
T ss_pred cccCCHHHHHHHHHHcC---CCCcCCHHHHHHHH
Confidence 35677778888888877 56677788888765
No 101
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A
Probab=27.45 E-value=2.9e+02 Score=25.01 Aligned_cols=44 Identities=23% Similarity=0.225 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCC-cEEEcc
Q 016925 285 PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDG-NVEFYK 342 (380)
Q Consensus 285 d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~-~V~f~G 342 (380)
+.+++|+....++ ...+.+++|+. +.+++.++++|++. ++.+..
T Consensus 33 e~vl~aa~~~~~~-----~~~~~iLvGd~---------~~i~~~~~~~gl~~~~~~ii~ 77 (329)
T 1td9_A 33 ERILEAVSKLAGN-----KVLNPIVIGNE---------NEIQAKAKELNLTLGGVKIYD 77 (329)
T ss_dssp HHHHHHHHHHHHT-----TSSEEEEESCH---------HHHHHHHHTTTBCCTTCEEEC
T ss_pred hHHHHHHHHHHHc-----CCcEEEEECCH---------HHHHHHHHHcCCCcCCCEEEC
Confidence 8899999887654 35789999972 68899999988763 466653
No 102
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=26.91 E-value=63 Score=25.20 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=27.6
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEc
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYT 74 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t 74 (380)
|+|+++.-+. .|..++++..+++.|.+.| +++.++.
T Consensus 2 ~ki~I~y~S~--tGnT~~~A~~ia~~l~~~g--~~v~~~~ 37 (148)
T 3f6r_A 2 SKVLIVFGSS--TGNTESIAQKLEELIAAGG--HEVTLLN 37 (148)
T ss_dssp CEEEEEEECS--SSHHHHHHHHHHHHHHTTT--CEEEEEE
T ss_pred CeEEEEEECC--CchHHHHHHHHHHHHHhCC--CeEEEEe
Confidence 5777776654 5789999999999998888 6666654
No 103
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=26.87 E-value=1.6e+02 Score=26.79 Aligned_cols=123 Identities=11% Similarity=0.021 Sum_probs=71.7
Q ss_pred HHhcCCCEEEE--cCHHHHHHHHHHhCCCCceEEecCCCCCCCCCCC----------CCCCCCCCCEEEEEecCCCccCh
Q 016925 217 LVGSCADLAMV--NSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----------PLERSTEYPAIISVAQFRPEKAH 284 (380)
Q Consensus 217 ~~~~~ad~ii~--~S~~~~~~i~~~~~~~~k~~vi~~gvd~~~~~~~----------~~~~~~~~~~il~VGRl~p~K~~ 284 (380)
.+.+.+|.|+. .++...+.+.++.. +-|| |+-|-+...|. .....-+...|.+||-+. +
T Consensus 96 vls~~~D~iviR~~~~~~~~~la~~~~----vPVI-Nag~g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~----~ 166 (308)
T 1ml4_A 96 TVEQYCDVIVIRHPKEGAARLAAEVAE----VPVI-NAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLK----Y 166 (308)
T ss_dssp HHTTTCSEEEEEESSTTHHHHHHHTCS----SCEE-EEEETTSCCHHHHHHHHHHHHHHSSCSSSEEEEEESCTT----T
T ss_pred HHHHhCcEEEEecCChhHHHHHHHhCC----CCEE-eCccCCccCcHHHHHHHHHHHHHhCCCCCeEEEEeCCCC----c
Confidence 34467898884 66666777766433 3344 65443333331 001112456899999542 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEe-ec
Q 016925 285 PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTM-KW 363 (380)
Q Consensus 285 d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~-~~ 363 (380)
-.+.+.+...... -+..+.++|....... +++.+.+++.|. .+...- ++.+.+..||+..+ .|
T Consensus 167 ~rva~Sl~~~~~~-----~G~~v~~~~P~~~~~~----~~~~~~~~~~g~--~~~~~~-----d~~eav~~aDvvyt~~~ 230 (308)
T 1ml4_A 167 GRTVHSLAEALTF-----YDVELYLISPELLRMP----RHIVEELREKGM--KVVETT-----TLEDVIGKLDVLYVTRI 230 (308)
T ss_dssp CHHHHHHHHHGGG-----SCEEEEEECCGGGCCC----HHHHHHHHHTTC--CEEEES-----CTHHHHTTCSEEEECCC
T ss_pred CchHHHHHHHHHH-----CCCEEEEECCccccCC----HHHHHHHHHcCC--eEEEEc-----CHHHHhcCCCEEEECCc
Confidence 2355666666554 3789999996533222 345566666664 365553 45578899999665 67
Q ss_pred h
Q 016925 364 Q 364 (380)
Q Consensus 364 ~ 364 (380)
+
T Consensus 231 q 231 (308)
T 1ml4_A 231 Q 231 (308)
T ss_dssp C
T ss_pred c
Confidence 5
No 104
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=26.19 E-value=1.2e+02 Score=23.30 Aligned_cols=37 Identities=14% Similarity=0.029 Sum_probs=25.1
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceE-EEE
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDC-IVY 73 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v-~v~ 73 (380)
||++++......+.-.-+..+.++.++.+.| ++| .||
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g--~~v~~vf 38 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKG--HEIFRVF 38 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcC--CeeCEEE
Confidence 6788777665443344466789999999988 455 444
No 105
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=26.09 E-value=1.1e+02 Score=27.60 Aligned_cols=52 Identities=13% Similarity=0.155 Sum_probs=39.6
Q ss_pred CCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcE-EEccCCCHHHHHHHHhh
Q 016925 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV-EFYKNLLYRSVLTIFMH 355 (380)
Q Consensus 302 ~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V-~f~G~v~~~el~~ly~~ 355 (380)
.|..-.+++|+. +.+..|.+.-++.+++.|+.... .|...++.+|+.+.+..
T Consensus 33 ~P~Lavilvg~d--paS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~ 85 (285)
T 3p2o_A 33 ESCLAVILVGDN--PASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINT 85 (285)
T ss_dssp CCEEEEEEESCC--HHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHH
T ss_pred CCeEEEEEeCCC--HHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHH
Confidence 466777888875 35678888999999999997554 46667888898877643
No 106
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=25.96 E-value=1.5e+02 Score=26.92 Aligned_cols=53 Identities=11% Similarity=0.068 Sum_probs=41.0
Q ss_pred CCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEE-EccCCCHHHHHHHHhhc
Q 016925 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRSVLTIFMHL 356 (380)
Q Consensus 302 ~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~-f~G~v~~~el~~ly~~a 356 (380)
.|..-.+++|+. +.+..|.+.-++.+++.|+..... |...++.+|+.+.+...
T Consensus 37 ~P~Lavilvg~d--paS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~l 90 (300)
T 4a26_A 37 VPGLASIIVGQR--MDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKL 90 (300)
T ss_dssp CCEEEEEEESCC--HHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHH
T ss_pred CceEEEEEeCCC--HHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHh
Confidence 377778889975 356788899999999999975544 66688999988777554
No 107
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=25.62 E-value=29 Score=19.78 Aligned_cols=31 Identities=29% Similarity=0.531 Sum_probs=21.2
Q ss_pred CeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEcc
Q 016925 305 PRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (380)
Q Consensus 305 ~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G 342 (380)
++-+.+|+. .+.+..|++.+++.++. |.|-|
T Consensus 5 vrtiwvggt-----peelkklkeeakkanir--vtfwg 35 (36)
T 2ki0_A 5 VRTIWVGGT-----PEELKKLKEEAKKANIR--VTFWG 35 (36)
T ss_dssp CCCCCBCCC-----HHHHHHHHHHHHHHCCC--CCBCC
T ss_pred eEEEEecCC-----HHHHHHHHHHHHhccEE--EEeec
Confidence 444556654 34567888889988874 77766
No 108
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=25.27 E-value=3.2e+02 Score=26.69 Aligned_cols=94 Identities=10% Similarity=-0.025 Sum_probs=54.0
Q ss_pred cChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCC-CHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEE
Q 016925 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS-DEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFT 360 (380)
Q Consensus 282 K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~-~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~ 360 (380)
.|.+..++++-.-.....+..+.-++-|+|...... ...-..+|+++.+++|++-.+.|.|.-+-+|+..+ .+|.+-+
T Consensus 131 ~G~~~al~alv~~~~~~~~~~~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~~pgg~t~~ei~~~-~~A~~ni 209 (525)
T 3aek_B 131 YGADETFRALVRALAVPMERTPEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAPLGASPDDLRKL-GQAHFNV 209 (525)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEEEETTCCHHHHHTG-GGSSEEE
T ss_pred HHHHHHHHHHHHHhccCccCCCCCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhh-ccCCEEE
Confidence 456665555543211100111245799998542111 11334789999999999988889988877777553 3444433
Q ss_pred eechhhHHHHHHHHHhh
Q 016925 361 MKWQLVYDEFLKLYLQK 377 (380)
Q Consensus 361 ~~~~~~~~~~~~~~~~~ 377 (380)
. -....|+.+-.||++
T Consensus 210 v-~~~~~g~~~A~~Le~ 225 (525)
T 3aek_B 210 L-MYPETGESAARHLER 225 (525)
T ss_dssp E-CCHHHHHHHHHHHHH
T ss_pred E-EChhhHHHHHHHHHH
Confidence 3 222356666666654
No 109
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=25.12 E-value=1.2e+02 Score=23.13 Aligned_cols=47 Identities=13% Similarity=0.131 Sum_probs=38.3
Q ss_pred HHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeechhhHHHHHHHHHhhc
Q 016925 322 LQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKS 378 (380)
Q Consensus 322 ~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~~~~~~~~~~~~~~~~ 378 (380)
.+++++....+|. .++.+++..++..+|. -.....|.||++.....+
T Consensus 104 ~~el~~~l~~~g~--------~~~~~~~~~~~~~~d~--~dg~I~~~eF~~~~~~~~ 150 (153)
T 2ovk_B 104 EDYLKDLLENMGD--------NFSKEEIKNVWKDAPL--KNKQFNYNKMVDIKGKAE 150 (153)
T ss_dssp HHHHHHHHHHSSS--------CCCHHHHHHHHHHCCE--ETTEECHHHHHHHHHCSC
T ss_pred HHHHHHHHHHcCC--------CCCHHHHHHHHHHcCC--CCCEEeHHHHHHHHhcCc
Confidence 3678888887753 4678999999999999 888999999998876543
No 110
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=24.67 E-value=85 Score=25.71 Aligned_cols=39 Identities=10% Similarity=0.095 Sum_probs=29.5
Q ss_pred CCCcEEEEECCCCCCCCChhHHHHHHHHHHHH-hCCCceEEEEc
Q 016925 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQE-ESPDLDCIVYT 74 (380)
Q Consensus 32 ~~~~~I~~~~p~~~~~GG~ervl~~la~~L~~-~g~~~~v~v~t 74 (380)
|.+|+|+++.-+. .|..++++-.+++.|.+ .| +++.++.
T Consensus 2 ~~M~kiliiy~S~--~GnT~~~a~~i~~~l~~~~g--~~v~~~~ 41 (188)
T 2ark_A 2 NAMGKVLVIYDTR--TGNTKKMAELVAEGARSLEG--TEVRLKH 41 (188)
T ss_dssp CCCEEEEEEECCS--SSHHHHHHHHHHHHHHTSTT--EEEEEEE
T ss_pred CCCCEEEEEEECC--CcHHHHHHHHHHHHHhhcCC--CeEEEEE
Confidence 5567899887763 47888888889999987 77 6666654
No 111
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=24.50 E-value=1.1e+02 Score=25.37 Aligned_cols=40 Identities=10% Similarity=0.121 Sum_probs=27.8
Q ss_pred cEEEEECCCCCC--CCChhHHHHHHHHHHHHhCCCceEEEEc
Q 016925 35 TSVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYT 74 (380)
Q Consensus 35 ~~I~~~~p~~~~--~GG~ervl~~la~~L~~~g~~~~v~v~t 74 (380)
|+|+++.-+... .|=...++-.+++++.+.|++++|.++-
T Consensus 2 ~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~d 43 (208)
T 2hpv_A 2 SKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILD 43 (208)
T ss_dssp CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEee
Confidence 688887766642 3456666677788898888777776664
No 112
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=24.46 E-value=1.4e+02 Score=26.80 Aligned_cols=51 Identities=10% Similarity=0.132 Sum_probs=39.6
Q ss_pred CCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcE-EEccCCCHHHHHHHHhh
Q 016925 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV-EFYKNLLYRSVLTIFMH 355 (380)
Q Consensus 303 ~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V-~f~G~v~~~el~~ly~~ 355 (380)
|..-.+++|+. +.+..|.+.-++.+++.|+.... .|...++.+|+.+.+..
T Consensus 36 P~Lavilvg~d--paS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~ 87 (286)
T 4a5o_A 36 PGLAVILVGTD--PASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDR 87 (286)
T ss_dssp CEEEEEEESCC--HHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHH
T ss_pred ceEEEEEeCCC--HHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHH
Confidence 77778888975 35678888999999999998554 46668899998877644
No 113
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=24.25 E-value=1.4e+02 Score=23.46 Aligned_cols=46 Identities=15% Similarity=0.205 Sum_probs=29.4
Q ss_pred HhHhhhcCCCCcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceE-EEE
Q 016925 24 SHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDC-IVY 73 (380)
Q Consensus 24 ~~~~~~~~~~~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v-~v~ 73 (380)
||.|. ....|+++|+.....++.=..+..+.++.++.+.| ++| .||
T Consensus 4 ~~~~~--~~~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g--~eV~~VF 50 (140)
T 2d1p_A 4 SHHHH--HHGSMRFAIVVTGPAYGTQQASSAFQFAQALIADG--HELSSVF 50 (140)
T ss_dssp ---------CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred ccccc--cCCceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCC--CccCEEE
Confidence 44443 23568999998777665455666889999998888 565 455
No 114
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=23.70 E-value=1.2e+02 Score=25.50 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=27.2
Q ss_pred CCCcEEEEECCCCC--CCCChhHHHHHHHHHHHHhCCCceEEEEc
Q 016925 32 NRTTSVAFFHPNTN--DGGGGERVLWCAVKAIQEESPDLDCIVYT 74 (380)
Q Consensus 32 ~~~~~I~~~~p~~~--~~GG~ervl~~la~~L~~~g~~~~v~v~t 74 (380)
|-+|||+++.-+.. ..|=...++-.+++++.+.+++++|.++-
T Consensus 2 ~mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~d 46 (211)
T 3p0r_A 2 NAMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELD 46 (211)
T ss_dssp --CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred cccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 44689999876664 33334555666777788875557776653
No 115
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=23.46 E-value=1.4e+02 Score=26.78 Aligned_cols=51 Identities=6% Similarity=0.062 Sum_probs=40.2
Q ss_pred CCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEE-EccCCCHHHHHHHHhh
Q 016925 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRSVLTIFMH 355 (380)
Q Consensus 303 ~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~-f~G~v~~~el~~ly~~ 355 (380)
|..-.+.+|+. +.+..|.+.-++.+++.|+..... |...++.+|+.+.+.+
T Consensus 33 P~Lavilvg~d--pas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~ 84 (281)
T 2c2x_A 33 PGLGTILVGDD--PGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDE 84 (281)
T ss_dssp CEEEEEEESCC--HHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHH
T ss_pred ceEEEEEeCCC--hhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHH
Confidence 77777888875 356788888999999999986655 6667889998877743
No 116
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=23.46 E-value=1.6e+02 Score=26.65 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=40.6
Q ss_pred CCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCc-EEEccCCCHHHHHHHHhh
Q 016925 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN-VEFYKNLLYRSVLTIFMH 355 (380)
Q Consensus 302 ~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~-V~f~G~v~~~el~~ly~~ 355 (380)
.|..-.+++|+. +.+..|.+.-++.+++.|+... +.+...++.+|+.+...+
T Consensus 53 ~P~LavIlVG~d--paS~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~ell~~I~~ 105 (303)
T 4b4u_A 53 TPILATILVGDD--GASATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAEIEK 105 (303)
T ss_dssp CCEEEEEEESCC--HHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHH
T ss_pred CCcEEEEEeCCC--HHHHHHHHHHHHHHHHcCCeEEEEecCccCCHHHHHHHHHH
Confidence 477777899975 3567888899999999999855 446678899998877663
No 117
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=23.38 E-value=98 Score=25.29 Aligned_cols=41 Identities=7% Similarity=-0.020 Sum_probs=28.9
Q ss_pred CcEEEEECCCCCC-CCChhHHHHHHHHHHHHhCCCceEEEEc
Q 016925 34 TTSVAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYT 74 (380)
Q Consensus 34 ~~~I~~~~p~~~~-~GG~ervl~~la~~L~~~g~~~~v~v~t 74 (380)
+|+|+++.-+... .|-.++++-.+++.+.+.|++++|.++-
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~d 42 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRD 42 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 3688888766642 3557777777888898888667776664
No 118
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=22.93 E-value=68 Score=28.77 Aligned_cols=52 Identities=12% Similarity=0.202 Sum_probs=40.7
Q ss_pred CCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhh
Q 016925 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMH 355 (380)
Q Consensus 302 ~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~ 355 (380)
.|..-.+.+|+. +.+..|.+.-++.+++.|+...+.|...++.+|+.+.+.+
T Consensus 27 ~P~Lavilvg~d--paS~~Yv~~k~k~~~~~Gi~~~~~lp~~~s~~ell~~I~~ 78 (276)
T 3ngx_A 27 EPSLKLIQIGDN--EAASIYARAKIRRGKKIGIAVDLEKYDDISMKDLLKRIDD 78 (276)
T ss_dssp CCEEEEEEESCC--HHHHHHHHHHHHHHHHHTCEEEEEEESSCCHHHHHHHHHH
T ss_pred CCcEEEEEeCCC--HHHHHHHHHHHHHHHHCCeEEEEECCCCCCHHHHHHHHHH
Confidence 377777888875 3466788999999999999666667888999998777643
No 119
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=22.67 E-value=82 Score=27.55 Aligned_cols=84 Identities=7% Similarity=-0.117 Sum_probs=45.7
Q ss_pred CCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016925 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRS 348 (380)
Q Consensus 269 ~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~e 348 (380)
..+++..|-..+.-+-..+++++....++ ++....++--...+-. . .+.+ -.-+-++
T Consensus 35 mkIliI~GS~r~~s~t~~La~~~~~~l~~-----~g~eve~idL~~~pl~----~--------~d~~------~~d~~~~ 91 (247)
T 2q62_A 35 PRILILYGSLRTVSYSRLLAEEARRLLEF-----FGAEVKVFDPSGLPLP----D--------AAPV------SHPKVQE 91 (247)
T ss_dssp CEEEEEECCCCSSCHHHHHHHHHHHHHHH-----TTCEEEECCCTTCCCT----T--------SSCT------TSHHHHH
T ss_pred CeEEEEEccCCCCCHHHHHHHHHHHHHhh-----CCCEEEEEEhhcCCCC----c--------CCCC------CCHHHHH
Confidence 35677778777666667788877765554 3455554432111000 0 0000 0001245
Q ss_pred HHHHHhhccEEEeechhhHHHH---HHHHH
Q 016925 349 VLTIFMHLFVFTMKWQLVYDEF---LKLYL 375 (380)
Q Consensus 349 l~~ly~~a~vf~~~~~~~~~~~---~~~~~ 375 (380)
+.+.+..||.+++...|-++.+ ||.++
T Consensus 92 l~~~i~~AD~iI~~sP~Yn~sipa~LKn~i 121 (247)
T 2q62_A 92 LRELSIWSEGQVWVSPERHGAMTGIMKAQI 121 (247)
T ss_dssp HHHHHHHCSEEEEEEECSSSSCCHHHHHHH
T ss_pred HHHHHHHCCEEEEEeCCCCCCccHHHHHHH
Confidence 6678888999888777665543 45444
No 120
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=22.67 E-value=1.7e+02 Score=26.56 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=40.8
Q ss_pred CCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEE-EccCCCHHHHHHHHhhc
Q 016925 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRSVLTIFMHL 356 (380)
Q Consensus 303 ~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~-f~G~v~~~el~~ly~~a 356 (380)
|..-.+++|+. +.+..|.+.-++.+++.|+..... |...++.+|+.+.+.+.
T Consensus 36 P~LavilvG~d--paS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~l 88 (301)
T 1a4i_A 36 PRLAILQVGNR--DDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSL 88 (301)
T ss_dssp CEEEEEEESCC--HHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHH
T ss_pred CEEEEEEeCCC--hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 77777888975 356788889999999999987665 56678888888777654
No 121
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=21.31 E-value=2.8e+02 Score=23.27 Aligned_cols=68 Identities=10% Similarity=-0.019 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCCC-CCCHHHHHHHHHHHHhcCCCCcEEEcc--CCCHHHHHHHHhhccEEEeechhhHHHHHHH
Q 016925 303 PRPRLQFVGSCRN-KSDEERLQSLKDKSIELKVDGNVEFYK--NLLYRSVLTIFMHLFVFTMKWQLVYDEFLKL 373 (380)
Q Consensus 303 ~~~~LvIvG~g~~-~~~~~~~~~L~~la~~lgl~~~V~f~G--~v~~~el~~ly~~a~vf~~~~~~~~~~~~~~ 373 (380)
...++.++..+.. ....+|.+++++..+++|.+ +..+. ..+.++..+.+.+||..+.+..+.| ..++.
T Consensus 26 ~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~--v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~-~l~~~ 96 (206)
T 3l4e_A 26 QGKTVTFIPTASTVEEVTFYVEAGKKALESLGLL--VEELDIATESLGEITTKLRKNDFIYVTGGNTF-FLLQE 96 (206)
T ss_dssp TTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCE--EEECCTTTSCHHHHHHHHHHSSEEEECCSCHH-HHHHH
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCe--EEEEEecCCChHHHHHHHHhCCEEEECCCCHH-HHHHH
Confidence 3568888874421 12246788999999999984 65552 1246778889999999999987766 44443
No 122
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=21.26 E-value=1.7e+02 Score=22.37 Aligned_cols=47 Identities=15% Similarity=0.086 Sum_probs=38.0
Q ss_pred HHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhccEEEeechhhHHHHHHHHHhhc
Q 016925 322 LQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHLFVFTMKWQLVYDEFLKLYLQKS 378 (380)
Q Consensus 322 ~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a~vf~~~~~~~~~~~~~~~~~~~ 378 (380)
.++++.....+|. .++.+++..+++.+|.= .....|.||++...+..
T Consensus 106 ~~el~~~l~~~g~--------~~~~~~~~~~~~~~d~~--dg~i~~~eF~~~~~~~~ 152 (156)
T 1wdc_B 106 IEYIKDLLENMGD--------NFNKDEMRMTFKEAPVE--GGKFDYVKFTAMIKGSG 152 (156)
T ss_dssp HHHHHHHHHHSSS--------CCCHHHHHHHHHHCCEE--TTEECHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhCC--------CCCHHHHHHHHHhcCCC--CCEEeHHHHHHHHhcCc
Confidence 3678888777652 36788999999999987 88999999999887654
No 123
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=21.15 E-value=1.3e+02 Score=24.09 Aligned_cols=53 Identities=6% Similarity=-0.046 Sum_probs=33.3
Q ss_pred CCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHhhc
Q 016925 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRSVLTIFMHL 356 (380)
Q Consensus 304 ~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~v~~~el~~ly~~a 356 (380)
+-++.++|.......+...+++++++...++.+-+.+.|..+.+++.+++.+-
T Consensus 108 gk~v~~f~t~g~~~~g~~~~~l~~~l~~~~~~~g~~~~g~~~~~~v~~W~~~~ 160 (162)
T 3klb_A 108 GKIVVPFATSGGSGIGNCEKNLHKAYPDIVWKDGKLLNGQITRDLVTEWFEKI 160 (162)
T ss_dssp TCEEEEEEECSSCCSHHHHHHHHHHCTTSEECCCEECCSCCCHHHHHHHHHHT
T ss_pred CCEEEEEEEeCCCCccHHHHHHHHHcCCCEeecceEEeCCCCHHHHHHHHHHh
Confidence 44555555332222345566777777766666777777777777888777653
No 124
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=20.73 E-value=70 Score=23.03 Aligned_cols=26 Identities=12% Similarity=-0.051 Sum_probs=11.2
Q ss_pred CHHHHHHHHhhccEEEeechhhHHHHHHH
Q 016925 345 LYRSVLTIFMHLFVFTMKWQLVYDEFLKL 373 (380)
Q Consensus 345 ~~~el~~ly~~a~vf~~~~~~~~~~~~~~ 373 (380)
+.+++..+++..| -.....|.||+.+
T Consensus 7 ~~~e~~~l~~~~d---~~g~i~~~eF~~~ 32 (108)
T 2pvb_A 7 KDADVAAALAACS---AADSFKHKEFFAK 32 (108)
T ss_dssp CHHHHHHHHHHTC---STTCCCHHHHHHH
T ss_pred CHHHHHHHHHHhC---CCCcCcHHHHHHH
Confidence 3444444444444 2333444444443
No 125
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=20.62 E-value=1.1e+02 Score=23.71 Aligned_cols=35 Identities=9% Similarity=0.043 Sum_probs=25.7
Q ss_pred cEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEE
Q 016925 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVY 73 (380)
Q Consensus 35 ~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~ 73 (380)
|+|.++.-+. .|-.++++..+++.|.+.| +++.++
T Consensus 1 mki~iiy~S~--~Gnt~~~a~~i~~~l~~~g--~~v~~~ 35 (147)
T 1f4p_A 1 PKALIVYGST--TGNTEYTAETIARELADAG--YEVDSR 35 (147)
T ss_dssp CEEEEEEECS--SSHHHHHHHHHHHHHHHHT--CEEEEE
T ss_pred CeEEEEEECC--cCHHHHHHHHHHHHHHhcC--CeeEEE
Confidence 5677665444 4788999999999998888 566555
No 126
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=20.31 E-value=1.3e+02 Score=26.89 Aligned_cols=78 Identities=5% Similarity=-0.113 Sum_probs=45.3
Q ss_pred CCEEEEEecCCCccChHHHHHHHHHHHHHccCCCCCCeEEEEcCCCCCCCHHHHHHHHHHHHhcCCCCcEEEccC-CCHH
Q 016925 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN-LLYR 347 (380)
Q Consensus 269 ~~~il~VGRl~p~K~~d~li~A~~~l~~~~~~~~~~~~LvIvG~g~~~~~~~~~~~L~~la~~lgl~~~V~f~G~-v~~~ 347 (380)
..+++..|-..+.-+-..+.+++....++ .+....++--...+-. . .... +. -+-+
T Consensus 59 mKILiI~GS~R~~S~T~~La~~~~~~l~~-----~G~eveiidL~dlpl~----~----------~d~~----~~~d~v~ 115 (279)
T 2fzv_A 59 VRILLLYGSLRARSFSRLAVEEAARLLQF-----FGAETRIFDPSDLPLP----D----------QVQS----DDHPAVK 115 (279)
T ss_dssp CEEEEEESCCSSSCHHHHHHHHHHHHHHH-----TTCEEEEBCCTTCCCT----T----------TSGG----GCCHHHH
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHhh-----CCCEEEEEehhcCCCC----c----------cCcc----CCCHHHH
Confidence 35777888777766677888887776554 3455555442211100 0 0000 11 1134
Q ss_pred HHHHHHhhccEEEeechhhHHH
Q 016925 348 SVLTIFMHLFVFTMKWQLVYDE 369 (380)
Q Consensus 348 el~~ly~~a~vf~~~~~~~~~~ 369 (380)
++.+.+..||.+++...|-++.
T Consensus 116 ~l~e~I~~ADgiV~aSP~Yn~s 137 (279)
T 2fzv_A 116 ELRALSEWSEGQVWCSPERHGQ 137 (279)
T ss_dssp HHHHHHHHCSEEEEEEEEETTE
T ss_pred HHHHHHHHCCeEEEEcCccccC
Confidence 6778889999998877776654
No 127
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=20.05 E-value=1.3e+02 Score=24.61 Aligned_cols=37 Identities=8% Similarity=-0.032 Sum_probs=28.2
Q ss_pred CCcEEEEECCCCCCCCChhHHHHHHHHHHHHhCCCceEEEEc
Q 016925 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYT 74 (380)
Q Consensus 33 ~~~~I~~~~p~~~~~GG~ervl~~la~~L~~~g~~~~v~v~t 74 (380)
.+|+|+++.-+ .|-.++++-.+++++.+.| +++.++.
T Consensus 3 ~mmkilii~~S---~g~T~~la~~i~~~l~~~g--~~v~~~~ 39 (199)
T 2zki_A 3 CKPNILVLFYG---YGSIVELAKEIGKGAEEAG--AEVKIRR 39 (199)
T ss_dssp CCCEEEEEECC---SSHHHHHHHHHHHHHHHHS--CEEEEEE
T ss_pred CCcEEEEEEeC---ccHHHHHHHHHHHHHHhCC--CEEEEEe
Confidence 35789988776 4678888888899998888 5555553
Done!