Query 016926
Match_columns 380
No_of_seqs 272 out of 2393
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 06:05:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bfd_A 2-oxoisovalerate dehydr 100.0 1.1E-83 3.7E-88 644.5 39.3 379 1-379 20-398 (400)
2 1qs0_A 2-oxoisovalerate dehydr 100.0 7.4E-81 2.5E-85 624.3 38.3 350 12-363 51-407 (407)
3 1w85_A Pyruvate dehydrogenase 100.0 2.1E-79 7.3E-84 607.4 38.4 349 10-368 18-367 (368)
4 1umd_A E1-alpha, 2-OXO acid de 100.0 1.8E-76 6.1E-81 587.2 40.7 355 10-366 11-366 (367)
5 2ozl_A PDHE1-A type I, pyruvat 100.0 6.3E-76 2.2E-80 581.3 36.5 327 28-358 26-354 (365)
6 2yic_A 2-oxoglutarate decarbox 100.0 6E-60 2.1E-64 509.3 24.8 343 31-378 113-499 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 6E-59 2.1E-63 512.5 26.5 343 31-378 358-744 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 1.3E-57 4.6E-62 493.6 26.6 362 12-377 170-571 (933)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 6.6E-33 2.2E-37 292.0 17.6 240 13-275 6-291 (621)
10 1gpu_A Transketolase; transfer 100.0 2.4E-30 8.4E-35 274.5 27.4 200 87-297 60-281 (680)
11 1r9j_A Transketolase; domains, 100.0 6.2E-30 2.1E-34 271.1 29.1 195 88-292 60-277 (673)
12 3rim_A Transketolase, TK; TPP, 100.0 4.4E-30 1.5E-34 271.8 27.9 181 87-277 76-278 (700)
13 2e6k_A Transketolase; structur 100.0 6.1E-31 2.1E-35 278.1 20.9 198 88-298 62-282 (651)
14 3mos_A Transketolase, TK; thia 100.0 1.6E-29 5.4E-34 265.5 26.1 233 32-279 4-253 (616)
15 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 6E-31 2.1E-35 277.3 11.7 226 27-274 19-295 (629)
16 1itz_A Transketolase; calvin c 100.0 1.1E-28 3.6E-33 261.8 27.5 246 30-291 8-288 (675)
17 3l84_A Transketolase; TKT, str 100.0 1.6E-27 5.3E-32 250.4 31.5 198 70-278 32-252 (632)
18 2r8o_A Transketolase 1, TK 1; 100.0 1.7E-28 5.7E-33 260.2 23.7 196 87-292 57-275 (669)
19 3uk1_A Transketolase; structur 100.0 1.4E-28 4.8E-33 261.0 23.2 185 87-282 98-301 (711)
20 3m49_A Transketolase; alpha-be 100.0 9.2E-28 3.1E-32 254.2 27.6 186 86-281 82-286 (690)
21 3kom_A Transketolase; rossmann 100.0 6.8E-28 2.3E-32 254.5 23.0 193 87-289 59-274 (663)
22 2qtc_A Pyruvate dehydrogenase 99.9 3.2E-26 1.1E-30 247.5 23.4 211 74-291 115-421 (886)
23 4feg_A Pyruvate oxidase; carba 99.9 5.3E-24 1.8E-28 223.4 12.3 164 141-315 418-597 (603)
24 3ahc_A Phosphoketolase, xylulo 99.8 5.2E-18 1.8E-22 181.0 16.8 140 127-270 159-322 (845)
25 1v5e_A Pyruvate oxidase; oxido 99.7 6.9E-17 2.3E-21 169.0 11.8 121 141-270 411-541 (590)
26 2pan_A Glyoxylate carboligase; 99.7 6.9E-17 2.4E-21 169.7 9.7 122 141-270 440-582 (616)
27 2uz1_A Benzaldehyde lyase; thi 99.7 1.9E-16 6.7E-21 164.6 10.4 117 142-268 418-546 (563)
28 2vk8_A Pyruvate decarboxylase 99.6 6.4E-17 2.2E-21 168.2 6.0 121 141-268 411-542 (563)
29 1q6z_A BFD, BFDC, benzoylforma 99.6 1.8E-16 6.2E-21 163.5 8.7 114 143-268 401-525 (528)
30 1ozh_A ALS, acetolactate synth 99.6 1.9E-16 6.4E-21 164.9 8.8 117 141-269 418-544 (566)
31 2iht_A Carboxyethylarginine sy 99.6 3.1E-16 1.1E-20 163.4 9.0 116 141-268 434-561 (573)
32 3eya_A Pyruvate dehydrogenase 99.6 8.7E-16 3E-20 159.3 11.5 118 141-270 404-531 (549)
33 2pgn_A Cyclohexane-1,2-dione h 99.6 2.9E-16 1E-20 164.1 7.8 118 142-271 423-550 (589)
34 1t9b_A Acetolactate synthase, 99.6 5E-16 1.7E-20 164.8 9.7 118 141-270 511-639 (677)
35 2vbf_A Branched-chain alpha-ke 99.6 9E-16 3.1E-20 159.8 9.6 117 141-268 423-551 (570)
36 1ybh_A Acetolactate synthase, 99.6 1.7E-15 5.7E-20 158.4 11.3 119 141-271 424-561 (590)
37 2vbi_A Pyruvate decarboxylase; 99.6 8.7E-16 3E-20 159.7 8.9 117 141-268 407-533 (566)
38 2nxw_A Phenyl-3-pyruvate decar 99.6 1E-15 3.5E-20 159.3 8.6 115 142-268 421-542 (565)
39 2wvg_A PDC, pyruvate decarboxy 99.6 1.7E-15 5.8E-20 157.7 10.0 117 141-268 411-541 (568)
40 2c31_A Oxalyl-COA decarboxylas 99.6 2.8E-15 9.6E-20 156.0 11.6 116 141-269 424-548 (568)
41 1ovm_A Indole-3-pyruvate decar 99.6 8.4E-16 2.9E-20 159.3 7.1 116 141-268 406-532 (552)
42 2q28_A Oxalyl-COA decarboxylas 99.6 6.2E-15 2.1E-19 153.2 12.3 117 141-270 419-546 (564)
43 2x7j_A 2-succinyl-5-enolpyruvy 99.5 3.2E-15 1.1E-19 156.8 5.2 114 142-268 454-580 (604)
44 3hww_A 2-succinyl-5-enolpyruvy 99.5 1.4E-14 4.9E-19 150.4 7.4 114 141-268 415-539 (556)
45 3lq1_A 2-succinyl-5-enolpyruvy 99.5 2.7E-14 9.4E-19 148.9 6.3 111 145-269 438-561 (578)
46 2c42_A Pyruvate-ferredoxin oxi 99.0 2.2E-09 7.4E-14 120.2 12.3 99 165-269 953-1071(1231)
47 2iht_A Carboxyethylarginine sy 95.1 0.095 3.2E-06 53.9 10.6 110 149-267 61-171 (573)
48 1ybh_A Acetolactate synthase, 95.1 0.093 3.2E-06 54.2 10.5 108 149-266 63-171 (590)
49 2uz1_A Benzaldehyde lyase; thi 95.1 0.11 3.6E-06 53.4 10.8 109 149-267 54-164 (563)
50 1ozh_A ALS, acetolactate synth 95.0 0.092 3.1E-06 54.0 10.1 109 149-267 61-170 (566)
51 2pgn_A Cyclohexane-1,2-dione h 94.8 0.16 5.4E-06 52.5 11.5 108 149-267 56-165 (589)
52 2vbi_A Pyruvate decarboxylase; 94.5 0.16 5.4E-06 52.1 10.4 110 149-267 54-169 (566)
53 2wvg_A PDC, pyruvate decarboxy 94.5 0.19 6.3E-06 51.6 10.8 110 149-267 54-169 (568)
54 2q28_A Oxalyl-COA decarboxylas 94.4 0.13 4.6E-06 52.6 9.5 109 150-266 59-168 (564)
55 3eya_A Pyruvate dehydrogenase 94.4 0.15 5.1E-06 52.2 9.8 108 149-266 54-161 (549)
56 1t9b_A Acetolactate synthase, 94.2 0.17 5.8E-06 53.3 10.2 107 149-265 133-240 (677)
57 2nxw_A Phenyl-3-pyruvate decar 94.1 0.14 4.9E-06 52.5 9.1 109 150-266 73-185 (565)
58 2c31_A Oxalyl-COA decarboxylas 94.1 0.15 5E-06 52.4 9.1 109 150-266 61-170 (568)
59 1v5e_A Pyruvate oxidase; oxido 93.9 0.14 4.6E-06 53.0 8.5 107 149-266 56-163 (590)
60 1yd7_A 2-keto acid:ferredoxin 93.8 0.059 2E-06 53.1 5.3 113 148-273 76-192 (395)
61 4feg_A Pyruvate oxidase; carba 93.6 0.15 5.3E-06 52.7 8.3 108 149-266 63-170 (603)
62 2x7j_A 2-succinyl-5-enolpyruvy 92.5 0.23 7.8E-06 51.5 7.5 109 149-267 82-198 (604)
63 2pan_A Glyoxylate carboligase; 92.2 0.73 2.5E-05 47.7 10.9 109 149-266 78-187 (616)
64 3mos_A Transketolase, TK; thia 92.2 0.61 2.1E-05 48.6 10.3 100 149-263 368-469 (616)
65 2vk8_A Pyruvate decarboxylase 92.1 0.44 1.5E-05 48.7 9.2 109 149-266 55-169 (563)
66 1q6z_A BFD, BFDC, benzoylforma 91.9 0.28 9.5E-06 49.8 7.2 110 149-267 51-161 (528)
67 2r8o_A Transketolase 1, TK 1; 91.8 0.79 2.7E-05 48.2 10.8 101 149-263 415-517 (669)
68 2e6k_A Transketolase; structur 91.8 0.69 2.4E-05 48.5 10.2 102 149-264 410-513 (651)
69 2o1s_A 1-deoxy-D-xylulose-5-ph 91.7 0.38 1.3E-05 50.1 8.1 103 148-264 373-476 (621)
70 2vbf_A Branched-chain alpha-ke 91.7 0.6 2.1E-05 47.8 9.6 109 149-267 76-190 (570)
71 3lq1_A 2-succinyl-5-enolpyruvy 91.1 0.42 1.4E-05 49.2 7.7 109 150-266 63-177 (578)
72 1itz_A Transketolase; calvin c 91.0 1.1 3.6E-05 47.3 10.7 102 149-264 427-531 (675)
73 3kom_A Transketolase; rossmann 91.0 1 3.4E-05 47.3 10.5 102 148-263 415-518 (663)
74 1qs0_B 2-oxoisovalerate dehydr 90.7 0.54 1.8E-05 45.0 7.6 102 147-265 63-174 (338)
75 1gpu_A Transketolase; transfer 90.6 0.9 3.1E-05 47.8 9.8 101 149-263 422-525 (680)
76 1ovm_A Indole-3-pyruvate decar 90.2 0.87 3E-05 46.3 9.0 109 149-267 56-170 (552)
77 3l84_A Transketolase; TKT, str 90.0 1.2 4.1E-05 46.4 10.0 101 149-264 395-497 (632)
78 1r9j_A Transketolase; domains, 89.5 1.7 5.7E-05 45.7 10.7 102 149-264 415-518 (673)
79 3m49_A Transketolase; alpha-be 88.7 1.9 6.4E-05 45.5 10.4 101 149-263 440-542 (690)
80 2o1x_A 1-deoxy-D-xylulose-5-ph 88.4 0.71 2.4E-05 48.1 6.9 102 148-264 376-478 (629)
81 2ozl_B PDHE1-B, pyruvate dehyd 88.2 1.4 4.9E-05 42.2 8.5 99 148-265 74-184 (341)
82 1w85_B Pyruvate dehydrogenase 85.9 1.5 5E-05 41.7 7.0 100 147-264 61-171 (324)
83 3uk1_A Transketolase; structur 84.9 3.6 0.00012 43.5 10.0 100 149-263 461-562 (711)
84 3hww_A 2-succinyl-5-enolpyruvy 84.7 1.7 5.7E-05 44.4 7.3 107 150-266 60-170 (556)
85 3rim_A Transketolase, TK; TPP, 84.6 4.1 0.00014 43.0 10.2 101 149-263 445-549 (700)
86 1ik6_A Pyruvate dehydrogenase; 84.1 3.5 0.00012 40.0 8.9 99 148-264 110-219 (369)
87 1umd_B E1-beta, 2-OXO acid deh 83.5 6.4 0.00022 37.1 10.4 98 148-263 63-171 (324)
88 2bfd_B 2-oxoisovalerate dehydr 80.6 4.3 0.00015 38.8 8.0 99 148-264 79-189 (342)
89 2c42_A Pyruvate-ferredoxin oxi 78.8 5.8 0.0002 44.6 9.3 109 149-273 67-178 (1231)
90 3ibs_A Conserved hypothetical 73.0 15 0.00053 31.5 8.9 71 165-235 111-196 (218)
91 2jgd_A 2-oxoglutarate dehydrog 66.9 11 0.00037 41.1 7.6 102 148-263 664-776 (933)
92 2yic_A 2-oxoglutarate decarbox 66.4 13 0.00045 40.1 8.0 107 148-263 596-708 (868)
93 2xt6_A 2-oxoglutarate decarbox 64.7 14 0.00047 41.1 8.0 107 148-263 841-953 (1113)
94 4hhu_A OR280; engineered prote 56.8 40 0.0014 27.1 7.3 34 227-260 82-115 (170)
95 2zzd_B Thiocyanate hydrolase s 54.2 18 0.00062 30.6 5.2 37 287-329 109-145 (157)
96 2w84_A Peroxisomal membrane pr 45.2 24 0.00083 25.7 3.9 24 294-318 32-55 (70)
97 3ff5_A PEX14P, peroxisomal bio 43.1 27 0.00093 24.1 3.7 26 294-320 27-52 (54)
98 3hbm_A UDP-sugar hydrolase; PS 40.1 81 0.0028 28.9 7.8 72 169-241 3-82 (282)
99 4hhu_A OR280; engineered prote 34.4 57 0.0019 26.2 4.9 33 228-260 2-34 (170)
100 1use_A VAsp, vasodilator-stimu 34.0 74 0.0025 21.0 4.5 18 285-304 7-24 (45)
101 1pyo_A Caspase-2; apoptosis, c 33.0 99 0.0034 26.1 6.6 71 196-266 35-109 (167)
102 4ds3_A Phosphoribosylglycinami 31.5 1.1E+02 0.0039 26.7 7.0 82 165-267 8-95 (209)
103 3kcq_A Phosphoribosylglycinami 31.4 65 0.0022 28.5 5.4 57 164-237 8-67 (215)
104 2kl8_A OR15; structural genomi 31.1 64 0.0022 23.0 4.2 29 232-260 5-33 (85)
105 3c5c_A RAS-like protein 12; GD 30.0 2.1E+02 0.0071 23.3 8.3 59 192-254 126-185 (187)
106 3av3_A Phosphoribosylglycinami 29.1 1.9E+02 0.0063 25.2 8.0 82 166-267 5-91 (212)
107 3tqr_A Phosphoribosylglycinami 27.9 1.7E+02 0.006 25.6 7.6 81 166-267 7-92 (215)
108 1abz_A Alpha-T-alpha, ATA; de 27.4 49 0.0017 20.4 2.6 27 301-327 12-38 (40)
109 1m3s_A Hypothetical protein YC 27.0 1E+02 0.0036 25.5 5.8 18 220-237 98-115 (186)
110 1jeo_A MJ1247, hypothetical pr 26.5 1.3E+02 0.0045 24.7 6.4 34 166-201 84-117 (180)
111 3t5g_A GTP-binding protein RHE 26.2 1.9E+02 0.0063 23.1 7.2 62 192-257 110-171 (181)
112 2pju_A Propionate catabolism o 26.2 1.5E+02 0.0051 26.3 6.9 83 168-256 108-198 (225)
113 2p1h_A APAF-1, apoptotic prote 26.2 41 0.0014 25.2 2.7 35 297-332 24-58 (94)
114 2h54_A Caspase-1; allosteric s 26.1 1.1E+02 0.0038 26.1 5.8 69 195-264 44-114 (178)
115 3o1l_A Formyltetrahydrofolate 26.1 2.1E+02 0.0071 26.6 8.1 53 164-235 105-160 (302)
116 1n3y_A Integrin alpha-X; alpha 25.9 76 0.0026 26.4 4.8 79 165-251 110-191 (198)
117 2pqm_A Cysteine synthase; OASS 25.5 3E+02 0.01 25.5 9.4 41 185-237 92-133 (343)
118 4aec_A Cysteine synthase, mito 24.8 2.4E+02 0.0081 27.6 8.6 59 189-261 194-252 (430)
119 2xhz_A KDSD, YRBH, arabinose 5 24.7 1.3E+02 0.0045 24.7 6.1 20 219-238 114-133 (183)
120 3tbh_A O-acetyl serine sulfhyd 24.7 2.6E+02 0.0089 25.9 8.7 41 185-237 86-127 (334)
121 3cf4_G Acetyl-COA decarboxylas 24.4 59 0.002 27.2 3.7 34 165-198 34-67 (170)
122 3etn_A Putative phosphosugar i 24.1 1.2E+02 0.0041 26.3 5.8 79 144-238 64-145 (220)
123 3da8_A Probable 5'-phosphoribo 23.6 2.8E+02 0.0097 24.2 8.2 80 166-267 14-98 (215)
124 1ydn_A Hydroxymethylglutaryl-C 23.4 4E+02 0.014 24.0 9.6 103 148-265 22-141 (295)
125 1x0u_A Hypothetical methylmalo 23.4 75 0.0026 32.1 4.8 42 165-206 90-139 (522)
126 2x5n_A SPRPN10, 26S proteasome 23.3 95 0.0032 26.6 4.9 32 168-199 110-141 (192)
127 1on3_A Methylmalonyl-COA carbo 23.1 88 0.003 31.6 5.2 43 165-207 94-144 (523)
128 3sho_A Transcriptional regulat 22.7 1.5E+02 0.005 24.5 5.9 81 144-239 44-125 (187)
129 2xf7_A GP23.1; viral protein; 22.7 68 0.0023 21.2 2.8 33 287-320 11-43 (51)
130 2x24_A Acetyl-COA carboxylase; 22.5 46 0.0016 35.5 3.0 44 164-207 119-170 (793)
131 3hyn_A Putative signal transdu 22.4 81 0.0028 27.4 4.1 37 165-202 80-118 (189)
132 1g6u_A Domain swapped dimer; d 22.3 1.1E+02 0.0036 19.6 3.6 23 302-325 10-32 (48)
133 2q5c_A NTRC family transcripti 21.5 1.5E+02 0.0052 25.4 5.9 84 168-256 96-187 (196)
134 3n9r_A Fructose-bisphosphate a 21.4 5E+02 0.017 24.1 11.3 112 165-290 41-163 (307)
135 3fxa_A SIS domain protein; str 21.3 1E+02 0.0035 26.0 4.7 78 145-238 51-129 (201)
136 3hht_B NitrIle hydratase beta 21.2 1.8E+02 0.0062 26.0 6.3 29 287-321 73-101 (229)
137 3lou_A Formyltetrahydrofolate 21.2 3.4E+02 0.012 24.9 8.5 53 164-235 95-150 (292)
138 2khz_A C-MYC-responsive protei 20.8 1E+02 0.0034 25.8 4.4 35 166-203 79-113 (165)
139 2e62_A Protein AT5G25060; CWF2 20.7 1.7E+02 0.006 20.5 4.8 33 297-329 25-57 (61)
140 3ghf_A Septum site-determining 20.7 1.2E+02 0.004 24.2 4.5 44 223-266 11-56 (120)
141 2ywr_A Phosphoribosylglycinami 20.7 1.5E+02 0.005 26.0 5.6 82 166-267 3-89 (216)
142 1rvg_A Fructose-1,6-bisphospha 20.3 5.2E+02 0.018 24.0 11.3 113 165-291 41-162 (305)
143 2bzr_A Propionyl-COA carboxyla 20.0 95 0.0033 31.5 4.7 43 165-207 107-157 (548)
No 1
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=1.1e-83 Score=644.53 Aligned_cols=379 Identities=47% Similarity=0.861 Sum_probs=345.7
Q ss_pred CccccCCCCCCCCeeEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHH
Q 016926 1 MRFISESSEERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIAS 80 (380)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~ 80 (380)
|+|++++....+|++||||.||++++++..+.+++++++++|+.|+++|.||+++..++++|+++|++++.||||+++|+
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~e~~~~~y~~M~~~r~fe~~~~~~~~~gri~~~~~~~GqEa~~vg~ 99 (400)
T 2bfd_A 20 LEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGS 99 (400)
T ss_dssp CCCCCCCCSSCSCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTCHHHHHHH
T ss_pred eeeccCcccCCCCeeEEECCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeecCCChHHHHHHH
Confidence 68999988889999999999999988876688999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEcccccHHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCccccCcccccchHHHHHHHHHhh
Q 016926 81 AAAIKNDDFVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 160 (380)
Q Consensus 81 ~~~l~~~D~v~~~yR~~~~~l~~G~~~~~~~~e~~g~~~~~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k 160 (380)
+.+|+++|+|+++||+|++++++|++++++|++++|+.+++++|+++++|+..+..++..++|+||+++|+|+|+|+|.+
T Consensus 100 ~~al~~~D~v~~~yR~~~~~~~~G~~~~~~l~e~~g~~~g~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~AvG~AlA~~ 179 (400)
T 2bfd_A 100 AAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAK 179 (400)
T ss_dssp HHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEecCcCHHHHHHcCCCHHHHHHHhcCCCCCCCCCCCCCcCCcccccCccccCccccccccHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999998788888899999999999999999999
Q ss_pred hcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCCCHH
Q 016926 161 MDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDAL 240 (380)
Q Consensus 161 ~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D~~ 240 (380)
+++++++|||++|||++++|.+||+||+|++|+||+||||+||+|++++++....+..++++++++|||++++|||+|+.
T Consensus 180 ~~~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~ 259 (400)
T 2bfd_A 180 RANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVF 259 (400)
T ss_dssp HHTCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCEEEEEETTCHH
T ss_pred hhCCCCeEEEEECchhhhcChHHHHHHHHHHHCcCEEEEEECCceeeeecccccCCCCCHHHHHHHcCCcEEEEeCCCHH
Confidence 99999999999999999999999999999999999999999999999999888877789999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChhhHHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHH
Q 016926 241 AIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRS 320 (380)
Q Consensus 241 av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~e~~~i~~ 320 (380)
+|+.++++|++++|++++|+||+++|||++|||++|+|..||+++|++.|++..|||.+++++|++.|+||++++++|++
T Consensus 260 av~~a~~~A~~~ar~~~~P~lIe~~tyR~~gHs~~D~~~~Yr~~~e~~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~ 339 (400)
T 2bfd_A 260 AVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRK 339 (400)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEEeeeeCCCCCCCCCccCCCHHHHHHHHhcCCHHHHHHHHHHHCCCCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999843589999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccccccccCCCccHHHHHHHHHHHHHhCCCCCCCCCC
Q 016926 321 SVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYPSNVP 379 (380)
Q Consensus 321 ~~~~~v~~a~~~a~~~p~p~~~~~~~~vy~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~ 379 (380)
+++++|++++++|++.|.|+++++|++||++.++++.+|++.|.+.+.++|++|++++|
T Consensus 340 ~~~~~v~~a~~~a~~~~~p~~~~~~~~vy~~~~~~l~~q~~~~~~~~~~~~~~~~~~~~ 398 (400)
T 2bfd_A 340 QSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLDHF 398 (400)
T ss_dssp HHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCHHHHHHHHHHHHHHHHHGGGSCGGGB
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCHHHHHHHHHHHHHHHhCCCcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999998765
No 2
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=7.4e-81 Score=624.29 Aligned_cols=350 Identities=36% Similarity=0.555 Sum_probs=336.0
Q ss_pred CCeeEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCCCCcEEE
Q 016926 12 IPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDFVV 91 (380)
Q Consensus 12 ~~~~~~~~~~g~~~~~~~~~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~~~~l~~~D~v~ 91 (380)
.|++||||.+|+++++. .+.+++++++++|+.|+++|.||+++..+++||+++|+|++.||||+++|++.+|+++|+++
T Consensus 51 ~~~~~~ld~~g~~~~~~-~~~~~~e~~~~~y~~M~~~R~fe~~~~~~~~qgr~~~~~~~~GqEA~~vg~~~al~~~D~v~ 129 (407)
T 1qs0_A 51 YSLVRVLDEQGDAQGPW-AEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCF 129 (407)
T ss_dssp TSCBCCBCTTSCBCSGG-GSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTTHHHHHHHHHHSCTTSEEE
T ss_pred CCeEEEECCCCCCCCcC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCcCCCChHHHHHHHHHhcCCCCEEE
Confidence 57899999999988764 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccHHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCccccCcccccchHHHHHHHHHhhhcCCCCeeEEE
Q 016926 92 PQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTY 171 (380)
Q Consensus 92 ~~yR~~~~~l~~G~~~~~~~~e~~g~~~~~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~ 171 (380)
++||+|++++++|+++.++|++++|+.++.++|+++++|+.....++++.+|+||+++|+|+|+|+|.++++++++|||+
T Consensus 130 ~~yR~~~~~l~~g~~~~~i~~el~g~~~~~~~G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~vv~i 209 (407)
T 1qs0_A 130 PTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAW 209 (407)
T ss_dssp CCSSCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred ecccchHHHHhcCCCHHHHHHHHhCCCCCCCCCCCceeecchhccCccccccccccchhHHHHHHHHHHHhCCCCEEEEE
Confidence 99999999999999999999999999999999999999998877899999999999999999999999999999999999
Q ss_pred eCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccccccccccc-CCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHH
Q 016926 172 FGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQF-RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAR 250 (380)
Q Consensus 172 ~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~-~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~ 250 (380)
+|||++++|.+||+||+|++|+||+||||+||+|+++++....+ ...+++++|++|||++++|||+|+++|+.++++|+
T Consensus 210 ~GDGa~~~G~~~Eal~~A~~~~lpvi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~~A~ 289 (407)
T 1qs0_A 210 IGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAA 289 (407)
T ss_dssp EETGGGGSHHHHHHHHHHHHHTCCEEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHH
T ss_pred ECCchhhcChHHHHHHHHHHHCcCEEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887665 56789999999999999999999999999999999
Q ss_pred HHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChhhHHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Q 016926 251 EMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHAL 330 (380)
Q Consensus 251 ~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~e~~~i~~~~~~~v~~a~ 330 (380)
+++|++++|+|||++|||.+|||++|||..||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++++
T Consensus 290 ~~ar~~~gP~lIe~~t~R~~Ghs~~Dd~~~Yr~~~e~~~~~-~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~ 368 (407)
T 1qs0_A 290 ERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFP-LGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQ 368 (407)
T ss_dssp HHHHTTSCCEEEEEECCCCSCSSTTCCGGGTSCTTHHHHCT-TCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEEEeeccCCcCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 59999999999999999999999999999999999999
Q ss_pred HHHHh------CCCCCCCccccccccCCCccHHHHHHHH
Q 016926 331 QEAEK------AEKPPISDLFTDVYDVSPSNLREQEHSL 363 (380)
Q Consensus 331 ~~a~~------~p~p~~~~~~~~vy~~~~~~~~~~~~~l 363 (380)
++|++ +|.|+++++|+|||+++|+++++|++++
T Consensus 369 ~~a~~~~~~~~~p~p~~~~~~~~vy~~~~~~l~~q~~~~ 407 (407)
T 1qs0_A 369 KEAEQYGTLANGHIPSAASMFEDVYKEMPDHLRRQRQEL 407 (407)
T ss_dssp HHHHTTCCSSSCCCCCSSGGGSSSSSSCCHHHHHHHHTC
T ss_pred HHHHhcccccCCCCCCHHHHHhhccCCCCHHHHHHHHhC
Confidence 99998 5799999999999999999999998753
No 3
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=2.1e-79 Score=607.36 Aligned_cols=349 Identities=36% Similarity=0.617 Sum_probs=325.3
Q ss_pred CCCCeeEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCCCCcE
Q 016926 10 ERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKNDDF 89 (380)
Q Consensus 10 ~~~~~~~~~~~~g~~~~~~~~~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~~~~l~~~D~ 89 (380)
...|++||||.||++++++..+.+++++++++|+.|+++|.||+++..++++|+++|+|++.||||+++|++.+|+++|+
T Consensus 18 ~~~~~~~~l~~~g~~~~~~~~~~l~~e~l~~~y~~M~~~R~fe~~~~~~~~qgr~g~~~~~~G~Ea~~vg~~~~l~~~D~ 97 (368)
T 1w85_A 18 EQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDF 97 (368)
T ss_dssp HTCCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCTTCHHHHHHHHHTCCTTCE
T ss_pred CCCCeeEEECCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCCHHHHHHHHHHhcCCcCE
Confidence 35689999999999988765678999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccccHHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCccccCcccccchHHHHHHHHHhhhcCCCCeeE
Q 016926 90 VVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAV 169 (380)
Q Consensus 90 v~~~yR~~~~~l~~G~~~~~~~~e~~g~~~~~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv 169 (380)
++++||+|++++++|.++..+|++++|+.+ |+ ++| ...++.+++|+||+++|+|+|+|+|.++++++++||
T Consensus 98 v~~~~R~~~~~~~~G~~~~~~~~el~G~~~----G~--~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~~~~~~vv 168 (368)
T 1w85_A 98 ILPGYRDVPQIIWHGLPLYQAFLFSRGHFH----GN--QIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAI 168 (368)
T ss_dssp EECCSSCHHHHHHTTCCHHHHHHHHHTCGG----GG--CCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHTTCSCCEE
T ss_pred EEecchhHHHHHhcCCCHHHHHHHHCCCCC----CC--CCC---cccccCCCccccCccccHHHHHHHHhHhhCCCCeEE
Confidence 999999999999999999999999999854 33 345 356888899999999999999999999999999999
Q ss_pred EEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHH
Q 016926 170 TYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAA 249 (380)
Q Consensus 170 ~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a 249 (380)
|++|||++++|.++|+||+|++|+||+||||+||+|+++++.....+.++++++|++|||++++|||+|+.+|+.++++|
T Consensus 169 ~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A 248 (368)
T 1w85_A 169 TYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAA 248 (368)
T ss_dssp EEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHHH
T ss_pred EEEchhhhhhcHHHHHHHHHHHHCcCEEEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998887777789999999999999999999999999999999
Q ss_pred HHHhhccCCcEEEEEEeecCCCCC-CCCCCCCCCChhhHHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 016926 250 REMAIGEGRPILIEALTYRVGHHT-TSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 328 (380)
Q Consensus 250 ~~~ar~~~gP~lIe~~t~R~~gHs-~~Dd~~~Yr~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~e~~~i~~~~~~~v~~ 328 (380)
++++|++++|+|||++|||.+||| ++|||..||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++
T Consensus 249 ~~~~r~~~gP~lIe~~t~r~~gHs~~~Ddp~~yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 327 (368)
T 1w85_A 249 RERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWA-KKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKE 327 (368)
T ss_dssp HHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHH-TTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEEeeccCCCCCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999998 499999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCccccccccCCCccHHHHHHHHHHHHH
Q 016926 329 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIK 368 (380)
Q Consensus 329 a~~~a~~~p~p~~~~~~~~vy~~~~~~~~~~~~~l~~~~~ 368 (380)
++++|+++|.|+++++|+|||+++|+++++|++++++.++
T Consensus 328 a~~~a~~~p~p~~~~~~~~vy~~~~~~l~~q~~~~~~~~~ 367 (368)
T 1w85_A 328 AIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKES 367 (368)
T ss_dssp HHHHHHTSCCCCHHHHHHTSCSSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCCHHHHHhhccCCCChHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999977653
No 4
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=1.8e-76 Score=587.19 Aligned_cols=355 Identities=39% Similarity=0.624 Sum_probs=341.1
Q ss_pred CCCCeeEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCCCC-c
Q 016926 10 ERIPCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIKND-D 88 (380)
Q Consensus 10 ~~~~~~~~~~~~g~~~~~~~~~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~~~~l~~~-D 88 (380)
...|++||||+||+++++ ..+.+++++++++|+.|+++|.||.++..++++|++++++++.|+|++++++..+|+++ |
T Consensus 11 ~~~~~~~~l~~~g~~~~~-~~~~l~~~~l~~l~~~m~~~R~~~~~~~~~~~~G~~g~~~~~~G~ea~~~~~~~~l~~~rD 89 (367)
T 1umd_A 11 FTEEPIRLIGEEGEWLGD-FPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFD 89 (367)
T ss_dssp SCSSCBCCBCTTSCBCCS-SCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHSCTTTS
T ss_pred CCCCeEEEECCCCCCCCc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcCHHHHHHHHHHHcCCCCc
Confidence 467899999999998887 46789999999999999999999999999999999999999999999999999999998 9
Q ss_pred EEEcccccHHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCccccCcccccchHHHHHHHHHhhhcCCCCee
Q 016926 89 FVVPQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 168 (380)
Q Consensus 89 ~v~~~yR~~~~~l~~G~~~~~~~~e~~g~~~~~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~v 168 (380)
+++++||+|++++.+|+++.++|++++|+.+|++.|+++++|+..+..++.+++|++|+++|+|+|+|+|.|+.+++++|
T Consensus 90 ~i~~s~r~~~~~~~~G~~~~~~l~~~~g~~~g~~~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~~~~~~v 169 (367)
T 1umd_A 90 WVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVA 169 (367)
T ss_dssp EEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTCCCCE
T ss_pred EEEeCcHHHHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHhCCCCeE
Confidence 99999999999999999999999999999999999999999998777888889999999999999999999999999999
Q ss_pred EEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHH
Q 016926 169 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHA 248 (380)
Q Consensus 169 v~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~ 248 (380)
||++|||++++|.++|+|++|++|+||+||||+||+|+++++.....+..++++++++|||++++|||+|+.+|+.++++
T Consensus 170 v~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~ 249 (367)
T 1umd_A 170 VCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKE 249 (367)
T ss_dssp EEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHH
T ss_pred EEEEcccccccCcHHHHHHHHHHhCcCEEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999887777778999999999999999999999999999999
Q ss_pred HHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChhhHHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 016926 249 AREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILH 328 (380)
Q Consensus 249 a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~e~~~i~~~~~~~v~~ 328 (380)
|+++++++++|+||+++|||.+|||++|+|..||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++
T Consensus 250 A~~~a~~~~gP~lIe~~t~r~~Ghs~~D~~~~Yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 328 (367)
T 1umd_A 250 AVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELER 328 (367)
T ss_dssp HHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHH-TTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEEeecCCCCCCCCCccccCCHHHHHHHH-cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 499999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCccccccccCCCccHHHHHHHHHHH
Q 016926 329 ALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRET 366 (380)
Q Consensus 329 a~~~a~~~p~p~~~~~~~~vy~~~~~~~~~~~~~l~~~ 366 (380)
++++|+++|.|+++++|+|||+++|+++++|++++++.
T Consensus 329 a~~~a~~~~~p~~~~~~~~vy~~~~~~l~~q~~~~~~~ 366 (367)
T 1umd_A 329 GLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEALLKEE 366 (367)
T ss_dssp HHHHHHHTCBCCGGGGGTTSSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHhhhcCCCChhHHHHHHHHHhh
Confidence 99999999999999999999999999999999998654
No 5
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=6.3e-76 Score=581.34 Aligned_cols=327 Identities=28% Similarity=0.433 Sum_probs=308.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccccchhhHHHHHHHhcCCCCcEEEcccccHHHHHHcCCC
Q 016926 28 SSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRI-SFYLTTSGEEAINIASAAAIKNDDFVVPQYREPGVLLWRGFS 106 (380)
Q Consensus 28 ~~~~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i-~~~~~~~G~Ea~~~~~~~~l~~~D~v~~~yR~~~~~l~~G~~ 106 (380)
++.+.+++++++++|+.|+++|.||+++..++++|++ +|+|++.||||+++|++.+|+++|+++++||+|++++++|++
T Consensus 26 ~~~~~l~~e~l~~~yr~M~~~R~~e~~~~~l~~~g~i~gf~~~~~GqEa~~vg~~~al~~~D~i~~~yR~~~~~~~~G~~ 105 (365)
T 2ozl_A 26 PVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLS 105 (365)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCC
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHhhCCCCEEehHHHHHHHHHhcCCC
Confidence 3456799999999999999999999999999999999 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCccccCCCCCCccccCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHH
Q 016926 107 MQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAAL 186 (380)
Q Consensus 107 ~~~~~~e~~g~~~~~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal 186 (380)
+.++|++++|+.+|+++|+++++|+.+ .++++.+|+||+++|+|+|+|+|.++++++++|||++|||++++|.+||+|
T Consensus 106 ~~~i~~e~~g~~~g~~~g~gg~~H~~~--~~~~~~~g~~G~~lp~A~G~A~A~~~~~~~~~vv~~~GDGa~~~G~~~Eal 183 (365)
T 2ozl_A 106 VREILAELTGRKGGCAKGKGGSMHMYA--KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAY 183 (365)
T ss_dssp HHHHHHHHTTCTTSTTTTSSCTTCCCB--TTBCCCCCSTTTHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCCcCc--cccCCCcchhhhhhHHHHHHHHHHHhcCCCceEEEEECchhhhccHHHHHH
Confidence 999999999999999999999999854 478888899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 016926 187 NFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (380)
Q Consensus 187 ~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t 266 (380)
|+|++|+||+||||+||+|+++++.......++++. ++||+++++|||+|+++|+.++++|++++|+++||+|||++|
T Consensus 184 n~A~~~~lpvi~vv~NN~~g~~t~~~~~~~~~~~~~--ra~g~p~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t 261 (365)
T 2ozl_A 184 NMAALWKLPCIFICENNRYGMGTSVERAAASTDYYK--RGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQT 261 (365)
T ss_dssp HHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGG--TTTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred HHHHHHCcCEEEEEECCCcccCCCcccccCCCCHHH--HhCCCCEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 999999999999999999999998776666677876 689999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCChhhHHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccc
Q 016926 267 YRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFT 346 (380)
Q Consensus 267 ~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~e~~~i~~~~~~~v~~a~~~a~~~p~p~~~~~~~ 346 (380)
||.+|||++|++..||+++|++.|++.+|||.+|+++|+++|+||++++++|+++++++|++++++|+++|.|+++++|+
T Consensus 262 ~R~~gHs~~D~~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~~~~~~ 341 (365)
T 2ozl_A 262 YRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGY 341 (365)
T ss_dssp CCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCGGGTTC
T ss_pred ecCCCCCCCCCCcccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHh
Confidence 99999999998888999999999974579999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCc-cHHH
Q 016926 347 DVYDVSPS-NLRE 358 (380)
Q Consensus 347 ~vy~~~~~-~~~~ 358 (380)
|||+++++ .+++
T Consensus 342 ~vy~~~~~~~~~~ 354 (365)
T 2ozl_A 342 HIYSSDPPFEVRG 354 (365)
T ss_dssp SSSSSCCCEEEEC
T ss_pred hhcCCCChhhhcc
Confidence 99998765 4433
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=6e-60 Score=509.29 Aligned_cols=343 Identities=15% Similarity=0.139 Sum_probs=283.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhc------CCCCcEEEc-ccccHHHHHH-
Q 016926 31 VKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAA------IKNDDFVVP-QYREPGVLLW- 102 (380)
Q Consensus 31 ~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~~~~------l~~~D~v~~-~yR~~~~~l~- 102 (380)
+.+++++++++|+.|+++|.||+++..++++|+. | +..||||++++++.+ ++++|++++ +||+|+++|+
T Consensus 113 ~~~s~e~~~~~y~~m~~~R~fE~~l~~~~~~~k~-~--g~~G~Ea~~~g~~~~l~~~~~l~~~D~v~gm~hRg~~~~Lan 189 (868)
T 2yic_A 113 DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKR-F--SLEGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLAN 189 (868)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGG-G--CCTTCTTHHHHHHHHHHHHHHTTCSEEEEECCSTTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-c--cCCChHHHHHHHHHHHHHhhhCCCCCEEEeccccchHHHHHH
Confidence 5799999999999999999999999999988874 2 349999999998876 558999998 7999999999
Q ss_pred -cCCCHHHHHHHhhcCCCCC-C-CCCCCccccCCCC------------CCccccCcccccchHHHHHHHHHhhhcC----
Q 016926 103 -RGFSMQEFANQCFGNKADY-G-KGRQMPIHYGSNK------------HNYFTVSSTIATQLPHAVGAAYALKMDR---- 163 (380)
Q Consensus 103 -~G~~~~~~~~e~~g~~~~~-~-~G~~~~~H~~~~~------------~~~~~~~g~lG~~lp~A~G~A~A~k~~~---- 163 (380)
+|+++.++|+|++|+.+++ + .|+++++|++... .++.+++|+||+++|+|+|+|+|.|+++
T Consensus 190 ~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~P~A~G~A~A~k~~~~~~~ 269 (868)
T 2yic_A 190 IVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTGE 269 (868)
T ss_dssp TTCCCHHHHTTTCC------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHHHHHHHHHHHHHTCST
T ss_pred HhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHHHHHHHHHHhhccCCc
Confidence 9999999999999999877 4 4566789976432 2456678999999999999999999864
Q ss_pred ------CCCeeEEEeCcccc-CcchHHHHHHHHHHcCCC---EEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEE
Q 016926 164 ------KDACAVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIR 233 (380)
Q Consensus 164 ------~~~~vv~~~GDG~~-~eG~~~Eal~~A~~~~Lp---vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~ 233 (380)
.+.++||++|||++ +||.+||+||+|+.|+|| +||||+||+|+++++.....+..++.+++++|||++++
T Consensus 270 ~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~NN~~g~st~~~~~~s~~~~~~~a~a~G~p~~~ 349 (868)
T 2yic_A 270 EGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFH 349 (868)
T ss_dssp TSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEE
T ss_pred ccccccCCceEEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEEcCCcccccCccccccccCHHHHHHhCCCcEEE
Confidence 56799999999996 899999999999999998 99999999999999876555566788999999999999
Q ss_pred EeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChhhHHHHHhcCChHHHHHHHHHHcCCCCHH
Q 016926 234 VDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGD 313 (380)
Q Consensus 234 VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~ 313 (380)
|||+|+++|+.+++.|++++|++++|+|||++|||++|||++|+|. ||.+++++.|++.+||+.+|+++|+++|++|++
T Consensus 350 VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p~-~~~p~~~~~~~~~~dPi~~~~~~L~~~G~~t~e 428 (868)
T 2yic_A 350 VNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-MTQPYMYDVIDTKRGSRKAYTEALIGRGDISMK 428 (868)
T ss_dssp EETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-GTCHHHHHHHTTCCCHHHHHHHHHHHTTSSCHH
T ss_pred EeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCcCcccccc-cCChHHHHHHHhCCCHHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999999999999999985 555677778876689999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-C-CC-CCCccccccccC----CCccHHHHHHHHHHHHHhCCCCCCCCC
Q 016926 314 IESELRSSVRKQILHALQEAEKA-E-KP-PISDLFTDVYDV----SPSNLREQEHSLRETIKKHPQDYPSNV 378 (380)
Q Consensus 314 e~~~i~~~~~~~v~~a~~~a~~~-p-~p-~~~~~~~~vy~~----~~~~~~~~~~~l~~~~~~~p~~~~~~~ 378 (380)
++++|+++++++|++++++|++. | .| +. .++.++|.. .+....+.++.+.+.+...|+.|..+.
T Consensus 429 e~~~i~~e~~~~v~~a~~~a~~~~p~~~~~~-~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~p~~~~~~~ 499 (868)
T 2yic_A 429 EAEDALRDYQGQLERVFNEVRELEKHEIEPS-ESVEADQQIPSKLATAVDKAMLQRIGDAHLALPEGFTVHP 499 (868)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC------------------CCCCCCHHHHHHHHHHTTCCCTTCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcccc-cccccccccccCCCCccCHHHHHHHHHhhccCCcccccch
Confidence 99999999999999999999873 2 21 22 334455542 123345667777777778899988764
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=6e-59 Score=512.45 Aligned_cols=343 Identities=15% Similarity=0.139 Sum_probs=283.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhc------CCCCcEEEc-ccccHHHHHH-
Q 016926 31 VKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAA------IKNDDFVVP-QYREPGVLLW- 102 (380)
Q Consensus 31 ~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~~~~------l~~~D~v~~-~yR~~~~~l~- 102 (380)
+.+|+++++++|+.|+++|.||+++..++++|+. | +..||||+++|++.+ ++++|++++ +||+|+++|+
T Consensus 358 ~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~~k~-~--g~~GqEa~~~g~~~~l~~~~~l~~~D~v~gm~hRg~~~~La~ 434 (1113)
T 2xt6_A 358 DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKR-F--SLEGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLAN 434 (1113)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGG-G--CCTTCTTHHHHHHHHHHHHHHTTCSEEEEECCSTTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-c--cCCChHHHHHHHHHHHHHhhhCCCCCEEEeccccchHHHHHH
Confidence 5799999999999999999999999999998874 2 239999999998776 568999998 7999999999
Q ss_pred -cCCCHHHHHHHhhcCCCCC-C-CCCCCccccCCCC------------CCccccCcccccchHHHHHHHHHhhhcC----
Q 016926 103 -RGFSMQEFANQCFGNKADY-G-KGRQMPIHYGSNK------------HNYFTVSSTIATQLPHAVGAAYALKMDR---- 163 (380)
Q Consensus 103 -~G~~~~~~~~e~~g~~~~~-~-~G~~~~~H~~~~~------------~~~~~~~g~lG~~lp~A~G~A~A~k~~~---- 163 (380)
+|++++++|+|++|+.+++ + .|+++++|++... .++.+++|+||+++|+|+|+|+|.|+++
T Consensus 435 ~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~p~A~G~A~A~k~~~~~~~ 514 (1113)
T 2xt6_A 435 IVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTGE 514 (1113)
T ss_dssp TTCCCHHHHSTTC-------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHHHHHHHHHHHHTTBST
T ss_pred HhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHHHHHHHHHHHhccccC
Confidence 9999999999999999887 4 4566789986432 2456678999999999999999999865
Q ss_pred ------CCCeeEEEeCcccc-CcchHHHHHHHHHHcCCC---EEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEE
Q 016926 164 ------KDACAVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIR 233 (380)
Q Consensus 164 ------~~~~vv~~~GDG~~-~eG~~~Eal~~A~~~~Lp---vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~ 233 (380)
.+.+++|++|||++ +||.+||+||+|+.|+|| +||||+||+|++++++....+..++.+++++|||++++
T Consensus 515 ~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~NN~~gist~~~~~~s~~~~~~~a~a~G~p~~~ 594 (1113)
T 2xt6_A 515 EGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFH 594 (1113)
T ss_dssp TSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEE
T ss_pred ccccccCCcEEEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEEeCCcccccCccccccccCHHHHHHhcCCcEEE
Confidence 56899999999996 999999999999999998 99999999999999876555556678999999999999
Q ss_pred EeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChhhHHHHHhcCChHHHHHHHHHHcCCCCHH
Q 016926 234 VDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGD 313 (380)
Q Consensus 234 VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~ 313 (380)
|||+|+++|+.+++.|++++|++++|+|||++|||++|||++|+|. ||.+++++.|++.+||+.+|+++|+++|++|++
T Consensus 595 VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p~-~~~~~~~~~~~~~~dpi~~~~~~L~~~G~~t~e 673 (1113)
T 2xt6_A 595 VNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-MTQPYMYDVIDTKRGSRKAYTEALIGRGDISMK 673 (1113)
T ss_dssp EETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-GTCHHHHHHHTTCCCHHHHHHHHHHHHTSSCHH
T ss_pred EcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeEccCCcCCCCccc-cCChHHHHHHHhcCCHHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999999999999999986 555667777865689999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-C-CC-CCCccccccccC----CCccHHHHHHHHHHHHHhCCCCCCCCC
Q 016926 314 IESELRSSVRKQILHALQEAEKA-E-KP-PISDLFTDVYDV----SPSNLREQEHSLRETIKKHPQDYPSNV 378 (380)
Q Consensus 314 e~~~i~~~~~~~v~~a~~~a~~~-p-~p-~~~~~~~~vy~~----~~~~~~~~~~~l~~~~~~~p~~~~~~~ 378 (380)
++++|+++++++|++++++|++. | .| +. ..+.++|.+ .+....+.++.+.+.+...|+.|..+.
T Consensus 674 e~~~i~~e~~~~v~~a~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~t~~~~~~l~~~~~~~~~~p~~~~~~~ 744 (1113)
T 2xt6_A 674 EAEDALRDYQGQLERVFNEVRELEKHEIEPS-ESVEADQQIPSKLATAVDKAMLQRIGDAHLALPEGFTVHP 744 (1113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------CCCCCCHHHHHHHHHHTTCCCTTCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcccc-cccccccccccCCCCccCHHHHHHHHHhhccCCcccccch
Confidence 99999999999999999999884 2 22 11 334455642 233345677778788888999988764
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=1.3e-57 Score=493.58 Aligned_cols=362 Identities=13% Similarity=0.096 Sum_probs=281.0
Q ss_pred CCeeEEeCCCCC-CCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcC---
Q 016926 12 IPCYRVLDDDGQ-PFPDS---SFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAI--- 84 (380)
Q Consensus 12 ~~~~~~~~~~g~-~~~~~---~~~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~~~~l--- 84 (380)
.|.++++|.+|+ ++.+. ..+.+++++++++|+.|+++|.||+++..++++|+. .+..|||++++|++.++
T Consensus 170 ~e~~~i~~~~~~~w~~~~~e~~~~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~gkr---f~~~G~Ea~i~g~~~~~~~a 246 (933)
T 2jgd_A 170 AEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKR---FSLEGGDALIPMLKEMIRHA 246 (933)
T ss_dssp EECSSCCCHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--C---CCCTTCTTHHHHHHHHHHHH
T ss_pred ceeeecCCHHHhHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---ccCCCchHHHHHHHHHHHHH
Confidence 356778888887 44221 146799999999999999999999999999999872 24689999999965554
Q ss_pred ---CCCcEEEc-ccccHHHHHH--cCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCC----------CccccCcccccc
Q 016926 85 ---KNDDFVVP-QYREPGVLLW--RGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKH----------NYFTVSSTIATQ 148 (380)
Q Consensus 85 ---~~~D~v~~-~yR~~~~~l~--~G~~~~~~~~e~~g~~~~~~~G~~~~~H~~~~~~----------~~~~~~g~lG~~ 148 (380)
+++|++++ +||+|+++|+ +|+++.++|+|++|+.++.+.|+++++|++.... ++.+++|++|++
T Consensus 247 ~~~g~~D~v~g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~~~~shlg~~ 326 (933)
T 2jgd_A 247 GNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIV 326 (933)
T ss_dssp HTTTCCEEEEECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEECCCCSSTTCH
T ss_pred hhCCCCCEEecCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCcccccccCCCceEEeecccCcccccc
Confidence 47999997 7999999999 9999999999999999888777889999875331 235778999999
Q ss_pred hHHHHHHHHHhhhcC-----CCCeeEEEeCcccc-CcchHHHHHHHHHHcCCC---EEEEEEcCCccccc-ccccccCCc
Q 016926 149 LPHAVGAAYALKMDR-----KDACAVTYFGDGGT-SEGDFHAALNFSAVTEAP---VIFICRNNGWAIST-PISDQFRSD 218 (380)
Q Consensus 149 lp~A~G~A~A~k~~~-----~~~~vv~~~GDG~~-~eG~~~Eal~~A~~~~Lp---vi~vv~NN~~~~~~-~~~~~~~~~ 218 (380)
+|+|+|+|+|.++++ .+.++||++|||++ ++|.+||+||+|+.+++| +||||+||+|++++ +...+.+..
T Consensus 327 ~p~A~G~A~A~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~ 406 (933)
T 2jgd_A 327 SPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTP 406 (933)
T ss_dssp HHHHHHHHHHHHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC---------------
T ss_pred cCHHHHHHHHHHhhccccCCCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhcccch
Confidence 999999999999884 67899999999998 999999999999999999 99999999999999 888777677
Q ss_pred CHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCCChhhHHHHHhcCChHH
Q 016926 219 GAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVT 298 (380)
Q Consensus 219 ~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr~~~e~~~~~~~~DPi~ 298 (380)
++++++++|||++++|||+|+++|+.+++.|++++|.+++|+|||+.|||++||+++|+| .||+++|++.|++.+||+.
T Consensus 407 ~~~~~a~a~g~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~-~yr~~~e~~~~~~~~dPi~ 485 (933)
T 2jgd_A 407 YCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEP-SATQPLMYQKIKKHPTPRK 485 (933)
T ss_dssp CGGGGGGTTTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC------------CCTTHHHHHTSCCHHH
T ss_pred hHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccch-hhCCHHHHHHHHccCCHHH
Confidence 899999999999999999999999999999999999999999999999999999999986 5999999999985579999
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCcccccccc------CCCccHHHHHHHHHHHHHhCC
Q 016926 299 RFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKA-EKPPISDLFTDVYD------VSPSNLREQEHSLRETIKKHP 371 (380)
Q Consensus 299 ~~~~~L~~~g~~t~~e~~~i~~~~~~~v~~a~~~a~~~-p~p~~~~~~~~vy~------~~~~~~~~~~~~l~~~~~~~p 371 (380)
+|+++|+++|++|++++++++++++++|+++++.|++. |.|.....+..+.. ..+....+.++.+.+.+...|
T Consensus 486 ~~~~~Li~~Gv~t~~~~~~i~~~~~~~v~~a~~~A~~~~p~~~~~~~~~~~~~~~~~~~~~tg~~~~~l~~i~~~~~~~p 565 (933)
T 2jgd_A 486 IYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVP 565 (933)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHHHHHHHHHTSCCCTTEECCCGGGCTTGGGSSCCTTCCCCCCCCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhcccccccccccCCCCCCCHHHHHHHHhhhcCCC
Confidence 99999999999999999999999999999999998873 32211123332211 112233345556666666678
Q ss_pred CCCCCC
Q 016926 372 QDYPSN 377 (380)
Q Consensus 372 ~~~~~~ 377 (380)
+.|.++
T Consensus 566 ~~~~~~ 571 (933)
T 2jgd_A 566 EAVEMQ 571 (933)
T ss_dssp TTSCCC
T ss_pred CCCccc
Confidence 887654
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.6e-33 Score=291.96 Aligned_cols=240 Identities=15% Similarity=0.142 Sum_probs=182.5
Q ss_pred CeeEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCC-CCcEEE
Q 016926 13 PCYRVLDDDGQPFPDSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIK-NDDFVV 91 (380)
Q Consensus 13 ~~~~~~~~~g~~~~~~~~~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~~~~l~-~~D~v~ 91 (380)
|.+.+|+ ++-.|.|.++++.++|.++++.| |.+...+.. + ..+++++++|++.+.+++..+++ +.|+++
T Consensus 6 ~~~~~l~---~i~~p~d~~~l~~~~l~~l~~~i---R~~~~~~~~--~--~~Gh~~~~lg~~~~~~~l~~~~~~~~D~~v 75 (621)
T 2o1s_A 6 AKYPTLA---LVDSTQELRLLPKESLPKLCDEL---RRYLLDSVS--R--SSGHFASGLGTVELTVALHYVYNTPFDQLI 75 (621)
T ss_dssp TTSTTGG---GCSSHHHHTTSCGGGHHHHHHHH---HHHHHHHSC--G--GGCTHHHHHTTHHHHHHHHHHSCTTTSEEE
T ss_pred CCCchhh---hcCChHHhhhCCHHHHHHHHHHH---HHHHHHHHh--h--cCCCcCCChhHHHHHHHHHhccCCCCCEEE
Confidence 4445565 33345567789999999999999 655433321 2 23688899999999999999999 899999
Q ss_pred --cccccHHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCC-CCccccCcccccchHHHHHHHHHhhhcCCCCee
Q 016926 92 --PQYREPGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNK-HNYFTVSSTIATQLPHAVGAAYALKMDRKDACA 168 (380)
Q Consensus 92 --~~yR~~~~~l~~G~~~~~~~~e~~g~~~~~~~G~~~~~H~~~~~-~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~v 168 (380)
..||++++.+.+|. . +-+..++.. | +.++|+.... ++....+|++|+++|+|+|+|+|.|+++++++|
T Consensus 76 ~~~gH~~y~~~~l~G~-~-~~~~~~r~~------~-g~~g~~~~~~s~~~~~~~G~~G~gl~~A~G~AlA~~~~~~~~~V 146 (621)
T 2o1s_A 76 WDVGHQAYPHKILTGR-R-DKIGTIRQK------G-GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRT 146 (621)
T ss_dssp ESSSTTCHHHHHTTTT-G-GGGGGTTST------T-SCCSSCCTTTCTTCCSCCSSSSCHHHHHHHHHHHHHHHTSCCCE
T ss_pred EeCchHHHHHHHHhCC-H-hhhhccccc------C-CCCCCCCCCCCCCCccCCcccchHHHHHHHHHHHHHHhCCCCeE
Confidence 67999999999998 2 223333321 2 2345554322 345567999999999999999999999999999
Q ss_pred EEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCC-------------------------------
Q 016926 169 VTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS------------------------------- 217 (380)
Q Consensus 169 v~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~------------------------------- 217 (380)
||++|||++++|++||+||+|+++++|+||||+||+|++++++..+...
T Consensus 147 v~v~GDG~~~~G~~~EaL~~A~~~~~pli~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~~~~~ 226 (621)
T 2o1s_A 147 VCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELL 226 (621)
T ss_dssp EEEEETTGGGSHHHHHHHHHHHHHCCSEEEEEEECC--------------------------------------------
T ss_pred EEEEchhhhhccHHHHHHHHHHhhCCCEEEEEeCCCcccCCCcchHHHHHHhhhcchhHHHHHHHHHHHHhccchHHHHH
Confidence 9999999999999999999999999999999999999998876532110
Q ss_pred ---cCH-------HHHHhhcCceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCC
Q 016926 218 ---DGA-------VVKGRAYGVRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTS 275 (380)
Q Consensus 218 ---~~~-------~~~a~a~G~~~~-~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~ 275 (380)
.++ ..++++|||+++ +|||||+.++.+++++|.+ .++|+||+++|+|.+||+..
T Consensus 227 ~r~~~~~~~~~~p~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~----~~gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 227 KRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRD----LKGPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp ------------CHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH----SCSEEEEEEECCCTTCCCCC
T ss_pred HHHHHHhhhccChhhHHHHCCCeEeeeeCCCCHHHHHHHHHHHHH----cCCCEEEEEEEecccCCChh
Confidence 011 478999999999 9999999999999998875 47999999999999999854
No 10
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.97 E-value=2.4e-30 Score=274.55 Aligned_cols=200 Identities=21% Similarity=0.186 Sum_probs=167.4
Q ss_pred CcEEEc--cccc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCCccccCCCCCCccccCcccccchHHHHHHHHHhh
Q 016926 87 DDFVVP--QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALK 160 (380)
Q Consensus 87 ~D~v~~--~yR~---~~~~l~~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k 160 (380)
.|.++. .|-+ +++++..|+ ...+-|..++. .|+.+++|+....+++...+|++|+++|.|+|+|+|.+
T Consensus 60 rDr~v~s~GH~~~~lYa~~~l~G~~~~~~~l~~~r~------~g~~~~ghp~~~~~g~~~~~G~lG~gl~~AvG~AlA~~ 133 (680)
T 1gpu_A 60 RDRFVLSNGHAVALLYSMLHLTGYDLSIEDLKQFRQ------LGSRTPGHPEFELPGVEVTTGPLGQGISNAVGMAMAQA 133 (680)
T ss_dssp CCEEEESSGGGHHHHHHHHHHTTCSCCHHHHTTTTC------TTCSCCSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHH
T ss_pred CCEEEEecchHHHHHHHHHHHhCCCCCHHHHHhhcc------cCCCCCCCCCccCCCeeeccccccchHHHHHHHHHHHH
Confidence 466554 4666 556667787 33444555554 25566889877667889999999999999999999998
Q ss_pred hcC----------CCCeeEEEeCccccCcchHHHHHHHHHHcCCC-EEEEEEcCCcccccccccccCCcCHHHHHhhcCc
Q 016926 161 MDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (380)
Q Consensus 161 ~~~----------~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (380)
+.+ .+++|||++|||++++|++||+|++|++++|| +|+||+||+|++++++.... ..++.+++++|||
T Consensus 134 ~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~ 212 (680)
T 1gpu_A 134 NLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATSISF-DEDVAKRYEAYGW 212 (680)
T ss_dssp HHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHHTC
T ss_pred HhccccccCccCCCCCeEEEEECCCccchhhHHHHHHHHHHhCCCcEEEEEECCCceEeccccccc-CccHHHHHHhcCC
Confidence 764 37899999999999999999999999999996 99999999999999877554 5789999999999
Q ss_pred eEE-EEeCC-CHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCC---CCCCChhhHHHHHhcCChH
Q 016926 230 RSI-RVDGN-DALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDS---TKYRPVDEIEWWRTTQDPV 297 (380)
Q Consensus 230 ~~~-~VdG~-D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~---~~Yr~~~e~~~~~~~~DPi 297 (380)
+++ +|||| |+.++++++++|.+ ..++|+||+++|+|.+||+..|++ ..||+++|++.|++ .+++
T Consensus 213 ~~~~~vdG~~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~~-~~~~ 281 (680)
T 1gpu_A 213 EVLYVENGNEDLAGIAKAIAQAKL---SKDKPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLKS-KFGF 281 (680)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHHH---CTTSCEEEEEECCTTTTSTTTTSGGGSSSCCCHHHHHHHHH-HTTC
T ss_pred eEEEEecCCCCHHHHHHHHHHHHH---CCCCCEEEEEEeecccccccCCCCccCCCCCCHHHHHHHHH-HcCC
Confidence 999 99999 99999999999875 257999999999999999977653 67999999999973 5544
No 11
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.97 E-value=6.2e-30 Score=271.06 Aligned_cols=195 Identities=21% Similarity=0.172 Sum_probs=162.8
Q ss_pred cEEE-c-cccc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCCccccCCC-CCCccccCcccccchHHHHHHHHHhh
Q 016926 88 DFVV-P-QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYALK 160 (380)
Q Consensus 88 D~v~-~-~yR~---~~~~l~~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~~-~~~~~~~~g~lG~~lp~A~G~A~A~k 160 (380)
|.++ + .|-. ++++...|+ ...+-+..++. .|+.+++|+... .+++..++|+||+++|.|+|+|+|.+
T Consensus 60 Drfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~------~~s~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~~ 133 (673)
T 1r9j_A 60 DRFVMSNGHGCALQYALLHMAGYNLTMDDLKGFRQ------DGSRTPGHPERFVTPGVEVTTGPLGQGIANAVGLAIAEA 133 (673)
T ss_dssp CEEEESSGGGHHHHHHHHHHHTCSCCHHHHHTTTS------TTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHH
T ss_pred CeEEEccccHHHHHHHHHHHcCCCCCHHHHHhhcc------CCCCCCCCCCCCCCCCeeeccCCCCCcHHHHHHHHHHHH
Confidence 5554 4 4665 355566787 44555666664 367778898754 46888899999999999999999998
Q ss_pred hcC----------CCCeeEEEeCccccCcchHHHHHHHHHHcCCC-EEEEEEcCCcccccccccccCCcCHHHHHhhcCc
Q 016926 161 MDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (380)
Q Consensus 161 ~~~----------~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (380)
+.+ .+++|+|++|||+++||++||++++|++++|| +|+||+||+|++++++.... ..++.+++++|||
T Consensus 134 ~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~N~~~i~~~~~~~~-~~d~~~~~~a~G~ 212 (673)
T 1r9j_A 134 HLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNYISIDGSTSLSF-TEQCHQKYVAMGF 212 (673)
T ss_dssp HHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHTTC
T ss_pred HhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEECCCCccccchhhcc-CHhHHHHHHHCCC
Confidence 764 58899999999999999999999999999995 99999999999999888776 6789999999999
Q ss_pred eEE-EEeC-CCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCC---CCCCCChhhHHHHHh
Q 016926 230 RSI-RVDG-NDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD---STKYRPVDEIEWWRT 292 (380)
Q Consensus 230 ~~~-~VdG-~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd---~~~Yr~~~e~~~~~~ 292 (380)
+++ .||| ||+.++++++++|.+ ..++|+||+++|+|.+||+..|. +..+++++|++.|++
T Consensus 213 ~~~~~vdG~~d~~~l~~Al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~~ 277 (673)
T 1r9j_A 213 HVIEVKNGDTDYEGLRKALAEAKA---TKGKPKMIVQTTTIGFGSSKQGTEKVHGAPLGEEDIANIKA 277 (673)
T ss_dssp EEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTSTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHH---cCCCCEEEEEecccccccccCCCcccccCCCCHHHHHHHHH
Confidence 999 8999 999999999998875 26799999999999999985443 234678888888863
No 12
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.4e-30 Score=271.82 Aligned_cols=181 Identities=22% Similarity=0.175 Sum_probs=153.7
Q ss_pred CcEEEc--cccc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCCccccCC-CCCCccccCcccccchHHHHHHHHHh
Q 016926 87 DDFVVP--QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGS-NKHNYFTVSSTIATQLPHAVGAAYAL 159 (380)
Q Consensus 87 ~D~v~~--~yR~---~~~~l~~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~-~~~~~~~~~g~lG~~lp~A~G~A~A~ 159 (380)
.|.++. .|-+ ++++...|+ ...+-+..|+. .|+.+++|+.. ..+++..++|++|+++|+|+|+|+|.
T Consensus 76 rDrfvls~GH~s~~lYa~l~l~G~~~~~~~l~~fr~------~gs~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~ 149 (700)
T 3rim_A 76 RDRFVLSAGHSSLTLYIQLYLGGFGLELSDIESLRT------WGSKTPGHPEFRHTPGVEITTGPLGQGLASAVGMAMAS 149 (700)
T ss_dssp CCEEEESSTTCHHHHHHHHHHTTSSCCHHHHTTTTS------TTCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEECCCchhHHHHHHHHHhCCCCCHHHHHHhhc------CCCCCCCCCCCCCCCCccccccccCCcchHHHHHHHHH
Confidence 577664 4666 356666786 44444666654 36778899875 35788889999999999999999999
Q ss_pred hhc-------------CCCCeeEEEeCccccCcchHHHHHHHHHHcCCC-EEEEEEcCCcccccccccccCCcCHHHHHh
Q 016926 160 KMD-------------RKDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGR 225 (380)
Q Consensus 160 k~~-------------~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~ 225 (380)
|+. +.+++|+|++|||++++|.+|||+++|++|+|| +|+||+||+|++++++.... ..++.++++
T Consensus 150 k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d~N~~si~~~~~~~~-~~~~~~~~~ 228 (700)
T 3rim_A 150 RYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDRNQISIEDDTNIAL-CEDTAARYR 228 (700)
T ss_dssp HHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHH
T ss_pred HHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEECCCcccccchhhcc-chhHHHHHH
Confidence 974 467899999999999999999999999999995 99999999999999987654 678999999
Q ss_pred hcCceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCC
Q 016926 226 AYGVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDD 277 (380)
Q Consensus 226 a~G~~~~~V-dG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd 277 (380)
+|||++++| ||||+.++++++++|.+ ..++|+||+|+|+|.+||+...+
T Consensus 229 a~G~~~~~V~DG~D~~al~~Al~~A~~---~~~~P~lI~~~T~kG~G~~~~e~ 278 (700)
T 3rim_A 229 AYGWHVQEVEGGENVVGIEEAIANAQA---VTDRPSFIALRTVIGYPAPNLMD 278 (700)
T ss_dssp HHTCEEEEEECTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTT
T ss_pred HcCCeEEEECCCCCHHHHHHHHHHHHH---cCCCCEEEEEEEEeeecCCccCC
Confidence 999999999 99999999999998865 26899999999999999987653
No 13
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.97 E-value=6.1e-31 Score=278.06 Aligned_cols=198 Identities=22% Similarity=0.182 Sum_probs=164.7
Q ss_pred cEEEc--cccc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCCccccCCC-CCCccccCcccccchHHHHHHHHHhh
Q 016926 88 DFVVP--QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYALK 160 (380)
Q Consensus 88 D~v~~--~yR~---~~~~l~~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~~-~~~~~~~~g~lG~~lp~A~G~A~A~k 160 (380)
|.++. .|-+ .++++..|+ ...+-|..++. .|+..++|+... .+++...+|+||+++|.|+|+|+|.+
T Consensus 62 Dr~vls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~------~~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~A~A~~ 135 (651)
T 2e6k_A 62 DRFVLSAGHGSMLLYAVLHLTGYDLPLEELKSFRQ------WGSKTPGHPERGHTPGVEVTTGPLGQGISTAVGLALAER 135 (651)
T ss_dssp CEEEESSGGGHHHHHHHHHHTTCSCCHHHHTTTTS------TTCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHHH
T ss_pred CeEEEeCcchhHHHHHHHHHhCCCCCHHHHHHhhc------cCCCCCCCCCCCCCCCeeeccccccchHHHHHHHHHHHH
Confidence 66553 4666 566667887 44444555554 245557787643 46888899999999999999999998
Q ss_pred hcC----------CCCeeEEEeCccccCcchHHHHHHHHHHcCCC-EEEEEEcCCcccccccccccCCcCHHHHHhhcCc
Q 016926 161 MDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (380)
Q Consensus 161 ~~~----------~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (380)
+.+ .+++|||++|||++++|++||+|++|++++|| +|+||+||+|++++++.... ..++.+++++|||
T Consensus 136 ~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~ 214 (651)
T 2e6k_A 136 KLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKLIVFWDDNRISIDGPTDLAF-TEDVLARYRAYGW 214 (651)
T ss_dssp HHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECCEETTEEGGGTC-CSCHHHHHHHTTC
T ss_pred hhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeEEEEEECCCccccccccccc-CccHHHHHHhCCC
Confidence 765 68899999999999999999999999999996 99999999999999887765 6789999999999
Q ss_pred eEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCC----CChhhHHHHHhcCChHH
Q 016926 230 RSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKY----RPVDEIEWWRTTQDPVT 298 (380)
Q Consensus 230 ~~~-~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Y----r~~~e~~~~~~~~DPi~ 298 (380)
+++ +|||||+.++++++++|.+ .++|+||+++|+|.+||+ .+++..| ++++|++.|+ +++|+.
T Consensus 215 ~~~~~vdG~d~~~l~~al~~a~~----~~~P~lI~~~t~kg~G~~-~~~~~~~H~~~~~~~e~~~~~-~~~~~~ 282 (651)
T 2e6k_A 215 QTLRVEDVNDLEALRKAIKLAKL----DERPTLIAVRSHIGFGSP-KQDSAKAHGEPLGPEAVEATR-RNLGWP 282 (651)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHH----SSSCEEEEEECCTTTTST-TTTSGGGTSSCCHHHHHHHHH-HHHTCC
T ss_pred eEEEEeCCCCHHHHHHHHHHHHH----CCCCEEEEEEeEeccccc-ccccccccccCCCHHHHHHHH-HHcCCC
Confidence 999 9999999999999998875 579999999999999999 5555556 5788999997 467764
No 14
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.97 E-value=1.6e-29 Score=265.50 Aligned_cols=233 Identities=20% Similarity=0.163 Sum_probs=172.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchh-hHHHHHHHhcCC---------CCcEEEc--cccc---
Q 016926 32 KVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGE-EAINIASAAAIK---------NDDFVVP--QYRE--- 96 (380)
Q Consensus 32 ~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~-Ea~~~~~~~~l~---------~~D~v~~--~yR~--- 96 (380)
++++....++=+....+|.+=-.+......|.++. ++|- |...+.....|+ +.|.++. .|-+
T Consensus 4 ~~~~~~~~~l~~~a~~iR~~~i~~~~~~~~GH~g~---~l~~~e~~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~~~~l 80 (616)
T 3mos_A 4 KPDQQKLQALKDTANRLRISSIQATTAAGSGHPTS---CCSAAEIMAVLFFHTMRYKSQDPRNPHNDRFVLSKGHAAPIL 80 (616)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHH---HHTTHHHHHHHHHTTCBCCTTCTTCTTSCEEEESSGGGHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHhcCCCcCCc---chhHHHHHHHHHHHhhccCCCCCCCCCCCeEEEcCccHHHHH
Confidence 34555555554445555655333333333455432 2332 333322223342 2577665 3655
Q ss_pred HHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCCCCCccccCcccccchHHHHHHHHHhhhcCC-CCeeEEEeCcc
Q 016926 97 PGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRK-DACAVTYFGDG 175 (380)
Q Consensus 97 ~~~~l~~G~~~~~~~~e~~g~~~~~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~-~~~vv~~~GDG 175 (380)
.+++...|+...+-|..++. .|+++++|+....+++..++|++|+++|+|+|+|+|.++.+. +++|||++|||
T Consensus 81 y~~~~l~G~~~~~~l~~~r~------~~s~l~ghp~~~~~~~d~~~G~lG~gl~~A~G~AlA~~~~~~~~~~vv~v~GDG 154 (616)
T 3mos_A 81 YAVWAEAGFLAEAELLNLRK------ISSDLDGHPVPKQAFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDG 154 (616)
T ss_dssp HHHHHHTTSSCGGGGGGTTC------TTCSCCSSCCTTSTTCSSCCCSTTCHHHHHHHHHHHHHHTSCCSCCEEEEEETG
T ss_pred HHHHHHcCCCCHHHHHHhcc------CCCCCCCCCCCCCCcccccccccCCccHHHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 23556678644444555554 377889998866677777899999999999999999986555 58999999999
Q ss_pred ccCcchHHHHHHHHHHcCCC-EEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhh
Q 016926 176 GTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAI 254 (380)
Q Consensus 176 ~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar 254 (380)
++++|++||+|++|++++|| +|+|++||+|++++++.......++.+++++|||++++|||||++++.++++++
T Consensus 155 ~~~eG~~~Eal~~A~~~~l~~livi~nnN~~~i~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~~----- 229 (616)
T 3mos_A 155 ELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQA----- 229 (616)
T ss_dssp GGGSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHSC-----
T ss_pred ccccCcHHHHHHHHHHcCCCcEEEEEECCCCCCcCCcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhc-----
Confidence 99999999999999999995 889999999999998877766678999999999999999999999999988543
Q ss_pred ccCCcEEEEEEeecCCCCCCCCCCC
Q 016926 255 GEGRPILIEALTYRVGHHTTSDDST 279 (380)
Q Consensus 255 ~~~gP~lIe~~t~R~~gHs~~Dd~~ 279 (380)
.++|+||+++|+|.+||+..+++.
T Consensus 230 -~~~P~lI~v~T~kg~G~~~~e~~~ 253 (616)
T 3mos_A 230 -KHQPTAIIAKTFKGRGITGVEDKE 253 (616)
T ss_dssp -CSSCEEEEEECCTTTTSTTTTTCS
T ss_pred -CCCCEEEEEEEecccccccccCch
Confidence 479999999999999998876654
No 15
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.97 E-value=6e-31 Score=277.34 Aligned_cols=226 Identities=15% Similarity=0.118 Sum_probs=174.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHhcCC-CCcEEEcccccHH---HHHH
Q 016926 27 DSSFVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASAAAIK-NDDFVVPQYREPG---VLLW 102 (380)
Q Consensus 27 ~~~~~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~~~~l~-~~D~v~~~yR~~~---~~l~ 102 (380)
+.+.+.++.++|.++|+.| |.+...+. .+ ..+++++++|+-.+..++-..++ +.|+++.. |||+ +.+.
T Consensus 19 p~d~~~l~~~~l~~l~~~i---R~~~~~~~---~~-~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~-~GH~~y~~~~l 90 (629)
T 2o1x_A 19 PKDLKRLSREQLPALTEEL---RGEIVRVC---SR-GGLHLASSLGAVDIITALHYVLDSPRDRILFD-VGHQAYAHKIL 90 (629)
T ss_dssp HHHHTTSCGGGHHHHHHHH---HHHHHHHH---TT-SSSCHHHHHHTHHHHHHHHHHSCTTTSEEEES-SSTTCHHHHHT
T ss_pred hhhhhhCCHHHHHHHHHHH---HHHHHHHH---Hh-cCCcCCCchhHHHHHHHHHhhcCCCCCeEEec-CchHHHHHHHH
Confidence 4456789999999999999 54432222 22 23688899999666666656668 89999998 8885 6777
Q ss_pred cCC-CHHHHHHHhhcCCCCCCCCCCCccccCCC-CCCccccCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcc
Q 016926 103 RGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEG 180 (380)
Q Consensus 103 ~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~~-~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG 180 (380)
.|. +....+.++.| .++|+... .++....+|++|+++|+|+|+|+|.|+++++++|||++|||++++|
T Consensus 91 ~G~~~~~~~~r~~~g----------~~G~p~~~~s~~~~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v~GDG~~~~G 160 (629)
T 2o1x_A 91 TGRRDQMADIKKEGG----------ISGFTKVSESEHDAITVGHASTSLTNALGMALARDAQGKDFHVAAVIGDGSLTGG 160 (629)
T ss_dssp TTTGGGGGGTTSTTS----------CCSSCCGGGCTTCCSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSH
T ss_pred hCcHhHHhCcccCCC----------CCCCCCCCCCCCCCcCCCcccccHhHHHHHHHHHHHhCCCCeEEEEEchhhhhcc
Confidence 786 22222333333 22333211 2355677899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCCEEEEEEcCCcccccccccccC--------------------------C---------cC-H----
Q 016926 181 DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFR--------------------------S---------DG-A---- 220 (380)
Q Consensus 181 ~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~--------------------------~---------~~-~---- 220 (380)
++||+||+|+++++|+||||+||+|++++++..+.. . .+ +
T Consensus 161 ~~~EaL~~A~~~~~pli~IvnnN~~~i~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~~~~ 240 (629)
T 2o1x_A 161 MALAALNTIGDMGRKMLIVLNDNEMSISENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTRHFF 240 (629)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECSBSSSBCCSSHHHHC------------------------------------------
T ss_pred HHHHHHHHHHhhCCCEEEEEECCCCCCCCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999876642100 0 03 2
Q ss_pred --H--HHHhhcCceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCC
Q 016926 221 --V--VKGRAYGVRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTT 274 (380)
Q Consensus 221 --~--~~a~a~G~~~~-~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~ 274 (380)
. .++++|||+++ +|||||+.++.+++++|.+ .++|+||+++|++.+||+.
T Consensus 241 ~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~----~~~P~lI~v~t~kg~G~~~ 295 (629)
T 2o1x_A 241 DPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVD----LDGPTILHIVTTKGKGLSY 295 (629)
T ss_dssp ---CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTT----SSSEEEEEEECCTTTTCHH
T ss_pred CcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHh----cCCCEEEEEEEecCCCCCh
Confidence 3 78999999999 9999999999999888753 5799999999999999873
No 16
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.97 E-value=1.1e-28 Score=261.83 Aligned_cols=246 Identities=20% Similarity=0.140 Sum_probs=182.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHH---hcCC-------CCcEEE-c-cccc-
Q 016926 30 FVKVSEGVAIKMYNDMVTLQTMDTIFYEAQRQGRISFYLTTSGEEAINIASA---AAIK-------NDDFVV-P-QYRE- 96 (380)
Q Consensus 30 ~~~~~~e~l~~~y~~M~~~R~~e~~~~~~~~~g~i~~~~~~~G~Ea~~~~~~---~~l~-------~~D~v~-~-~yR~- 96 (380)
-+.++.++|.++ ...+|.+--.+......|.++ +++|.--+.+++- ..++ +.|.++ + .|-+
T Consensus 8 ~~~l~~~~l~~~---a~~iR~~~~~~v~~a~~GH~g---~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr~vls~GH~~~ 81 (675)
T 1itz_A 8 GKAATGELLEKS---VNTIRFLAIDAVEKANSGHPG---LPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVLSAGHGCM 81 (675)
T ss_dssp --CCCHHHHHHH---HHHHHHHHHHHHHHHTCSCCH---HHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHH
T ss_pred cCCCCHHHHHHH---HHHHHHHHHHHHHHcCCCccC---ccHhHHHHHHHHHHHHhcCCcCCCCCCCCCeEEEcCcchHH
Confidence 357888888754 334455433333333455543 3344333333333 1233 236555 3 4666
Q ss_pred --HHHHHHcCC--CHHHHHHHhhcCCCCCCCCCCCccccCCC-CCCccccCcccccchHHHHHHHHHhhhcC--------
Q 016926 97 --PGVLLWRGF--SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYALKMDR-------- 163 (380)
Q Consensus 97 --~~~~l~~G~--~~~~~~~e~~g~~~~~~~G~~~~~H~~~~-~~~~~~~~g~lG~~lp~A~G~A~A~k~~~-------- 163 (380)
+++++..|+ ...+-|..++. .|+..++|+... .+++...+|+||+++|.|+|+|+|.++.+
T Consensus 82 ~lYa~l~l~G~~~~~~~~l~~~r~------~~~~~~ghp~~~~~~~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~ 155 (675)
T 1itz_A 82 LQYALLHLAGYDSVKEEDLKQFRQ------WGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDS 155 (675)
T ss_dssp HHHHHHHHHTCTTCCHHHHTTTTS------TTCSSCSSCCTTTCTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTB
T ss_pred HHHHHHHHcCCCCCCHHHHHhccc------CCCCCCCCCCCCCCCCeeECCccHHhHHHHHHHHHHHhhhhccccccccc
Confidence 556667787 34344555554 255567888753 46888899999999999999999998765
Q ss_pred --CCCeeEEEeCccccCcchHHHHHHHHHHcCC-CEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEE-EEeCC-C
Q 016926 164 --KDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSI-RVDGN-D 238 (380)
Q Consensus 164 --~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~L-pvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~-~VdG~-D 238 (380)
++++|||++|||++++|++||+|++|++++| |+|+||+||+|++++++.... ..++.+++++|||+++ .|||| |
T Consensus 156 ~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d 234 (675)
T 1itz_A 156 EIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEALGWHTIWVKNGNTG 234 (675)
T ss_dssp CCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTTC
T ss_pred CCCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEECCCccCCCChhhhc-ChhHHHHHHhCCCEEEEEecCCCC
Confidence 7889999999999999999999999999999 799999999999998887755 6789999999999999 89999 9
Q ss_pred HHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCC----CCCChhhHHHHH
Q 016926 239 ALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDST----KYRPVDEIEWWR 291 (380)
Q Consensus 239 ~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~----~Yr~~~e~~~~~ 291 (380)
+.++++++++|.+. .++|+||+++|+|.+||+..+++. .+.+++|++.++
T Consensus 235 ~~~l~~al~~a~~~---~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~e~~~~~~ 288 (675)
T 1itz_A 235 YDDIRAAIKEAKAV---TDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATR 288 (675)
T ss_dssp HHHHHHHHHHHHHC---CSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHC---CCCeEEEEEeeecccCcccccCcccccCCCCCHHHHHHHH
Confidence 99999999988752 579999999999999999755443 245677777765
No 17
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.96 E-value=1.6e-27 Score=250.36 Aligned_cols=198 Identities=21% Similarity=0.200 Sum_probs=160.7
Q ss_pred cchhhHHHHHHHhcCC---------CCcEEEc--cccc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCCccccCCC
Q 016926 70 TSGEEAINIASAAAIK---------NDDFVVP--QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN 134 (380)
Q Consensus 70 ~~G~Ea~~~~~~~~l~---------~~D~v~~--~yR~---~~~~l~~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~~ 134 (380)
++|---+.+++...|+ +.|.++. .|-+ .++++..|+ ...+-|..++. .|+..++|+...
T Consensus 32 ~lg~~ei~~~L~~~~~~~p~~p~~~~rDrfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~------~~s~~~ghp~~~ 105 (632)
T 3l84_A 32 PLGLADILSVLSYHLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQ------LHSKTPGHPEIS 105 (632)
T ss_dssp HHHHHHHHHHHTTTCCCCTTCTTCTTSCEEEESSGGGHHHHHHHHHHHTCSCCHHHHTTTTC------TTCSSCSSCCTT
T ss_pred ChhHHHHHHHHHHHhCcCCCCCCCCCCCEEEEcCCcccHHHHHHHHHhCCCCCHHHHHHHhc------CCCCCCCCCCCC
Confidence 4444444445555564 4577765 4666 566667886 44444556654 355567888765
Q ss_pred CCCccccCcccccchHHHHHHHHHhhhcCC-------CCeeEEEeCccccCcchHHHHHHHHHHcCCC-EEEEEEcCCcc
Q 016926 135 KHNYFTVSSTIATQLPHAVGAAYALKMDRK-------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWA 206 (380)
Q Consensus 135 ~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~-------~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~ 206 (380)
.+++..++|++|+++|.|+|+|+|.++++. +++|||++|||++++|++||++++|++++|| +|+|++||+|+
T Consensus 106 ~~g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~~~L~~livi~nnN~~~ 185 (632)
T 3l84_A 106 TLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYDSNNIS 185 (632)
T ss_dssp STTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEE
T ss_pred CCCcccCCcchhhHHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhhccHHHHHHHHHHcCCCcEEEEEECCCcc
Confidence 678888999999999999999999997653 8999999999999999999999999999995 99999999999
Q ss_pred cccccccccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCC
Q 016926 207 ISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDS 278 (380)
Q Consensus 207 ~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~ 278 (380)
+++++.... ..++.+++++|||++++|||||++++.+++++|.+ .++|+||+++|+|.+||+...++
T Consensus 186 i~~~~~~~~-~~d~~~~~~a~G~~~~~vdGhd~~~l~~al~~A~~----~~~P~lI~v~T~kG~G~~~~e~~ 252 (632)
T 3l84_A 186 IEGDVGLAF-NENVKMRFEAQGFEVLSINGHDYEEINKALEQAKK----STKPCLIIAKTTIAKGAGELEGS 252 (632)
T ss_dssp TTEEGGGTC-CCCHHHHHHHTTCEEEEEETTCHHHHHHHHHHHHT----CSSCEEEEEECCTTTTCGGGTTC
T ss_pred cccchhhhc-ChhHHHHHHHcCCeEEEEeeCCHHHHHHHHHHHHh----CCCCEEEEEeeEeeecCCCCCCc
Confidence 998877654 57899999999999999999999999998887753 68999999999999999875543
No 18
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.96 E-value=1.7e-28 Score=260.17 Aligned_cols=196 Identities=23% Similarity=0.229 Sum_probs=161.6
Q ss_pred CcEEEc--cccc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCCccccCCC-CCCccccCcccccchHHHHHHHHHh
Q 016926 87 DDFVVP--QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYAL 159 (380)
Q Consensus 87 ~D~v~~--~yR~---~~~~l~~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~~-~~~~~~~~g~lG~~lp~A~G~A~A~ 159 (380)
.|.++. .|-+ .+++...|+ ...+-|..++. .|+..++|+... .+++...+|+||+++|.|+|+|+|.
T Consensus 57 rDr~v~s~GH~~~~lYa~~~l~G~~~~~~~l~~~r~------~~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~AlA~ 130 (669)
T 2r8o_A 57 RDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQ------LHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAE 130 (669)
T ss_dssp CCEEEESSGGGHHHHHHHHHHHTCSCCHHHHTTTTS------TTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEEeCccHHHHHHHHHHHcCCCCCHHHHHHhhc------CCCCCCCCCCccCCCCcccccccccchHHHHHHHHHHH
Confidence 355544 4666 456666786 33444555554 255557888643 4688889999999999999999999
Q ss_pred hhcC----------CCCeeEEEeCccccCcchHHHHHHHHHHcCCC-EEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 160 KMDR----------KDACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 160 k~~~----------~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
++.+ .+++|||++|||++++|++||+|++|++++|| +|+||+||+|++++++.... ..++.+++++||
T Consensus 131 ~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G 209 (669)
T 2r8o_A 131 KTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWF-TDDTAMRFEAYG 209 (669)
T ss_dssp HHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTT
T ss_pred HHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHcCCCcEEEEEECCCcEecccccccc-CccHHHHHHHCC
Confidence 8654 37899999999999999999999999999996 99999999999998877554 578999999999
Q ss_pred ceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCC-CCCC---CCCCChhhHHHHHh
Q 016926 229 VRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTT-SDDS---TKYRPVDEIEWWRT 292 (380)
Q Consensus 229 ~~~~-~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~-~Dd~---~~Yr~~~e~~~~~~ 292 (380)
|+++ +|||||+.++++++++|.+ ..++|+||+++|+|..||+. .+++ ..||+++|++.|++
T Consensus 210 ~~~~~~vdG~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~ee~~~~~~ 275 (669)
T 2r8o_A 210 WHVIRDIDGHDAASIKRAVEEARA---VTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTRE 275 (669)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred CeEEeEECCCCHHHHHHHHHHHHh---cCCCCEEEEEEeEeccCcCCcCCCCcccCCCCCHHHHHHHHH
Confidence 9999 9999999999999999875 25799999999999999995 4433 57999999999863
No 19
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.96 E-value=1.4e-28 Score=260.96 Aligned_cols=185 Identities=23% Similarity=0.239 Sum_probs=141.7
Q ss_pred CcEEEc--cccc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCCccccCCC-CCCccccCcccccchHHHHHHHHHh
Q 016926 87 DDFVVP--QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYAL 159 (380)
Q Consensus 87 ~D~v~~--~yR~---~~~~l~~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~~-~~~~~~~~g~lG~~lp~A~G~A~A~ 159 (380)
.|.++. .|-+ .+++...|+ ...+-|..|+. .|+..++|+... .+++..++|+||+++|.|+|+|+|.
T Consensus 98 rDrfvls~GH~s~~lYa~l~l~G~~~~~~~l~~~r~------~~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~ 171 (711)
T 3uk1_A 98 RDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQ------LHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGE 171 (711)
T ss_dssp CCEEEECSGGGHHHHHHHHHHHTCSCCHHHHHTTTS------TTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEEeCCcccHHHHHHHHHhCCCCCHHHHHhhcc------ccCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHH
Confidence 576664 4666 345566787 45555666664 255667888643 4688889999999999999999999
Q ss_pred hhcCC----------CCeeEEEeCccccCcchHHHHHHHHHHcCCC-EEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 160 KMDRK----------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 160 k~~~~----------~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
++.+. +++|||++|||++++|++||+|++|++++|| +|+||+||+|++++++.... ..++.+++++||
T Consensus 172 ~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~G 250 (711)
T 3uk1_A 172 ALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWF-HDDTPKRFEAYG 250 (711)
T ss_dssp HHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTT
T ss_pred HhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEECCCcccccchhhhc-CCCHHHHHHHcC
Confidence 87653 7899999999999999999999999999996 99999999999998887664 578999999999
Q ss_pred ceEEE-EeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCC
Q 016926 229 VRSIR-VDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR 282 (380)
Q Consensus 229 ~~~~~-VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr 282 (380)
|++++ |||||++++.+++++|. +.++|+||+++|+|.+||+..+++..|.
T Consensus 251 ~~~~~~vdG~d~~~l~~Al~~A~----~~~~P~lI~v~T~kG~G~~~~e~~~~~H 301 (711)
T 3uk1_A 251 WNVIPNVNGHDVDAIDAAIAKAK----RSDKPSLICCKTRIGNGAATKAGGHDVH 301 (711)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHT----TCSSCEEEEEEC----------------
T ss_pred CcEEEEeCCCCHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCCCCccccc
Confidence 99999 99999999999888775 3689999999999999998765554443
No 20
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.96 E-value=9.2e-28 Score=254.16 Aligned_cols=186 Identities=24% Similarity=0.260 Sum_probs=152.2
Q ss_pred CCcEEEc--cccc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCCccccCC-CCCCccccCcccccchHHHHHHHHH
Q 016926 86 NDDFVVP--QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGS-NKHNYFTVSSTIATQLPHAVGAAYA 158 (380)
Q Consensus 86 ~~D~v~~--~yR~---~~~~l~~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~-~~~~~~~~~g~lG~~lp~A~G~A~A 158 (380)
+.|.++. .|-+ .+++...|+ ...+-|..++. .|+..++|+.. ..+++..++|++|+++|.|+|+|+|
T Consensus 82 ~rDrfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~rq------~gs~~~Ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA 155 (690)
T 3m49_A 82 NRDRFVLSAGHGSMLLYSLLHLSGYDVTMDDLKNFRQ------WGSKTPGHPEYGHTAGVDATTGPLGQGIATAVGMAMA 155 (690)
T ss_dssp TSCEEEESSGGGHHHHHHHHHHTTSSCCHHHHTTTTC------TTCSSCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHH
T ss_pred CCCeEEECCccHHHHHHHHHHHHCCCCCHHHHHhhcc------CCCCCCCCCCCCCCCccccCCccccccHHHHHHHHHH
Confidence 4576664 3555 355566786 34444555654 36667789875 3578888999999999999999999
Q ss_pred hhhcCC----------CCeeEEEeCccccCcchHHHHHHHHHHcCCC-EEEEEEcCCcccccccccccCCcCHHHHHhhc
Q 016926 159 LKMDRK----------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAY 227 (380)
Q Consensus 159 ~k~~~~----------~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~ 227 (380)
.++.+. +++|||++|||++++|++||++++|++++|| +|+|++||+|++++++.... ..++.+++++|
T Consensus 156 ~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~ 234 (690)
T 3m49_A 156 ERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLYDSNDISLDGDLNRSF-SESVEDRYKAY 234 (690)
T ss_dssp HHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHH
T ss_pred HHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEEECCCeecccchhhcc-chhHHHHHHHc
Confidence 987543 7899999999999999999999999999995 99999999999998876543 57899999999
Q ss_pred CceEEEE-eCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCC
Q 016926 228 GVRSIRV-DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKY 281 (380)
Q Consensus 228 G~~~~~V-dG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Y 281 (380)
||++++| ||||++++.+++++|.+ ..++|+||+|+|+|.+|++..+++..|
T Consensus 235 G~~~~~v~DG~d~~~l~~Al~~a~~---~~~~P~lI~v~T~kG~G~~~~~~~~~~ 286 (690)
T 3m49_A 235 GWQVIRVEDGNDIEAIAKAIEEAKA---DEKRPTLIEVRTTIGFGSPNKSGKSAS 286 (690)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGG
T ss_pred CCcEEEEecCCCHHHHHHHHHHHHh---cCCCCEEEEEEeecccccCcccCcccc
Confidence 9999999 99999999998877764 258999999999999999866554433
No 21
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.96 E-value=6.8e-28 Score=254.50 Aligned_cols=193 Identities=23% Similarity=0.219 Sum_probs=151.6
Q ss_pred CcEEEc--cccc---HHHHHHcCC-CHHHHHHHhhcCCCCCCCCCCCccccCCC-CCCccccCcccccchHHHHHHHHHh
Q 016926 87 DDFVVP--QYRE---PGVLLWRGF-SMQEFANQCFGNKADYGKGRQMPIHYGSN-KHNYFTVSSTIATQLPHAVGAAYAL 159 (380)
Q Consensus 87 ~D~v~~--~yR~---~~~~l~~G~-~~~~~~~e~~g~~~~~~~G~~~~~H~~~~-~~~~~~~~g~lG~~lp~A~G~A~A~ 159 (380)
.|.++. .|-+ ++++...|+ ...+-+..|+. .|+..++|+... .+++..++|+||+++|+|+|+|+|.
T Consensus 59 rDrfvls~GH~s~~lYa~l~l~G~~~~~~~l~~~r~------~~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~ 132 (663)
T 3kom_A 59 RDRFVLSNGHGSMLLYSLLHLTGYDLSIEDIKNFRQ------LHSKTPGHPEYGYTPGVETTTGPLGQGVANAVGMALGE 132 (663)
T ss_dssp SCEEEECSSSCHHHHHHHHHHHTCSCCHHHHTTTTS------TTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHH
T ss_pred CCeEEEeCCcccHHHHHHHHHhCCCCCHHHHHhhcc------CCCCCCCCCCCCCCCCcccCCcchhhHHHHHHHHHHhH
Confidence 577664 4666 344556786 44455666654 356667888653 5688889999999999999999999
Q ss_pred hhcCC----------CCeeEEEeCccccCcchHHHHHHHHHHcCCC-EEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 160 KMDRK----------DACAVTYFGDGGTSEGDFHAALNFSAVTEAP-VIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 160 k~~~~----------~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp-vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
++.+. +++|+|++|||++++|++||+|++|++++|| +|+|++||+|++++++.... ..++.+++++||
T Consensus 133 ~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dnN~~~i~~~~~~~~-~~d~~~~~~a~G 211 (663)
T 3kom_A 133 KLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDDNNISIDGDTKGWF-SDNTPERFRAYG 211 (663)
T ss_dssp HHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECC-----CGGGTC-CCCHHHHHHHTT
T ss_pred HhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEECCCcccccchhhhc-chhHHHHHHHCC
Confidence 87653 7899999999999999999999999999996 99999999999998877654 578999999999
Q ss_pred ceEE-EEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCCCCCCCCC----ChhhHHH
Q 016926 229 VRSI-RVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYR----PVDEIEW 289 (380)
Q Consensus 229 ~~~~-~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~Dd~~~Yr----~~~e~~~ 289 (380)
|+++ +|||||+.++.+++++|.+. .++|+||+++|+|.+||+...++..|. +++|++.
T Consensus 212 ~~~~~~vdG~d~~~l~~al~~A~~~---~~~P~lI~~~T~kg~G~~~~e~~~~~Hg~~l~~e~~~~ 274 (663)
T 3kom_A 212 WHVIENVDGHDFVAIEKAINEAHSQ---QQKPTLICCKTVIGFGSPEKAGTASVHGSPLSDQERAS 274 (663)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHC---SSSCEEEEEECCTTTTCTTTTTCSSTTSSCCCHHHHHH
T ss_pred CeEEEEEcCCCHHHHHHHHHHHHhc---CCCCEEEEEecccccccCCCCCCccccCCCCCHHHHHH
Confidence 9999 89999999999998887642 589999999999999998765543332 3455544
No 22
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.94 E-value=3.2e-26 Score=247.45 Aligned_cols=211 Identities=17% Similarity=0.161 Sum_probs=165.5
Q ss_pred hHHHHHHHhcCC------CCcEEEc-cccc---HHHHHHcCCCHHHHHHHhhcCCCCCCCCCCCccccCCC-CCC-cccc
Q 016926 74 EAINIASAAAIK------NDDFVVP-QYRE---PGVLLWRGFSMQEFANQCFGNKADYGKGRQMPIHYGSN-KHN-YFTV 141 (380)
Q Consensus 74 Ea~~~~~~~~l~------~~D~v~~-~yR~---~~~~l~~G~~~~~~~~e~~g~~~~~~~G~~~~~H~~~~-~~~-~~~~ 141 (380)
|...+.....|+ +.|+|+. .|-+ +++++..|+..++-|..|+.-. .+.+++.|+... .++ ....
T Consensus 115 el~~~l~~~~~~~~~~~~~~D~V~~~GH~sp~~Ya~~~l~Gr~~~e~l~~fRq~~----~~~gl~~~p~~~~~p~~~~~~ 190 (886)
T 2qtc_A 115 TIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEV----HGNGLSSYPHPKLMPEFWQFP 190 (886)
T ss_dssp HHHHHHHHHTCCCCCSSSCCCEEECCGGGHHHHHHHHHHTTSSCHHHHTTBTCCT----TSSCBCSSCCTTTSTTTCCCC
T ss_pred HHHHHHHHHhcCCCCCCCCCCEEEEcchhHHHHHHHHHHhCCCCHHHHHhccCCC----CCCCCCCCCCcccCCCccccc
Confidence 444444444566 4687777 4776 5667788986666677666421 245677777654 244 6778
Q ss_pred CcccccchHHHHHHHHHhhh-------cCCCCeeEEEeCccccCcchHHHHHHHHHHcCC-CEEEEEEcCCccccccccc
Q 016926 142 SSTIATQLPHAVGAAYALKM-------DRKDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISD 213 (380)
Q Consensus 142 ~g~lG~~lp~A~G~A~A~k~-------~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~L-pvi~vv~NN~~~~~~~~~~ 213 (380)
+|++|.+++.|+|+|++.|+ ++.+++|+|++|||++++|++|||||+|++++| |+||||+||++++++++..
T Consensus 191 tG~~G~g~s~AiG~A~a~~~l~~~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~N~~si~~~v~~ 270 (886)
T 2qtc_A 191 TVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTG 270 (886)
T ss_dssp CCSTTHHHHHHHHHHHHHHHHHHTTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCT
T ss_pred ccccCccHHHHHHHHHHhhhhcccccccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEECCCcccCCCccc
Confidence 99999999999999999998 778999999999999999999999999999999 6999999999999998875
Q ss_pred cc-CCcCHHHHHhhcCceEEEE----------------------------------------------------------
Q 016926 214 QF-RSDGAVVKGRAYGVRSIRV---------------------------------------------------------- 234 (380)
Q Consensus 214 ~~-~~~~~~~~a~a~G~~~~~V---------------------------------------------------------- 234 (380)
.. ...++.++++++||++++|
T Consensus 271 ~~~~~~~l~~~~~~~G~~~~~v~~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~~~r~~~F~~~~~~~~l~~~ 350 (886)
T 2qtc_A 271 NGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVAD 350 (886)
T ss_dssp TSCHHHHHHHHHHHTTCEEEEECBCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTSTTSHHHHTTTTT
T ss_pred cccccHHHHHHHHhCCCCEEEEecchhHHHHHccCCchHHHHHHHhccchhhhhhhhccchHHHHhhcccchHHHHHHhh
Confidence 32 3467889999999999998
Q ss_pred -----------eCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCC--CCCCC----CCCChhhHHHHH
Q 016926 235 -----------DGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTT--SDDST----KYRPVDEIEWWR 291 (380)
Q Consensus 235 -----------dG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~--~Dd~~----~Yr~~~e~~~~~ 291 (380)
||||+.+|++++++|.++ .++|+||+++|+|.+||+. .++.. .|++.++++.|+
T Consensus 351 ~~d~~i~~l~~dGhD~~~l~~a~~~A~~~---~~~PtlI~~~T~KG~G~~~~~e~~~~~H~~~~l~~~~~~~~r 421 (886)
T 2qtc_A 351 WTDEQIWALNRGGHDPKKIYAAFKKAQET---KGKATVILAHTIKGYGMGDAAKGKNIAHQVKKMNMDGVRHIR 421 (886)
T ss_dssp CCHHHHHTCCBGGGCHHHHHHHHHHHHHC---CSSCEEEEEECCTTTTCTTCC-------------CHHHHHHH
T ss_pred cChhhHhhcccCCCCHHHHHHHHHHHHHc---CCCCEEEEEeeeeccccchhhcCCccccCCCCCCHHHHHHHH
Confidence 699999999999999874 4689999999999999973 22221 278888888886
No 23
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.90 E-value=5.3e-24 Score=223.45 Aligned_cols=164 Identities=17% Similarity=0.218 Sum_probs=129.0
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCC-cccccc---------
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTP--------- 210 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~-~~~~~~--------- 210 (380)
..|+||.++|.|+|++++. ++++|||++|||+++++ +++|++|+++++|+++||.||+ |++...
T Consensus 418 ~~g~~G~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~~~~~~~~~~ 491 (603)
T 4feg_A 418 LFATMGVGIPGAIAAKLNY----PERQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQND 491 (603)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHCSSC
T ss_pred ccccccchhHHHhhHHHhC----CCCcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHHHHHHhcCCC
Confidence 3589999999999999884 57899999999999876 6779999999999887777664 876321
Q ss_pred -cccccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe---ecCCCCCCCCCCCCCCChh-
Q 016926 211 -ISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT---YRVGHHTTSDDSTKYRPVD- 285 (380)
Q Consensus 211 -~~~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t---~R~~gHs~~Dd~~~Yr~~~- 285 (380)
........++.+++++||+++++|+ ++.++.+++++|++ .+.+||+|||+.| +|..+|.+.|++..||..+
T Consensus 492 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~--~~~~gP~lIev~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (603)
T 4feg_A 492 FIGVEFNDIDFSKIADGVHMQAFRVN--KIEQLPDVFEQAKA--IAQHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADI 567 (603)
T ss_dssp CCSSBCCCCCHHHHHHHTTCEEEEEC--BGGGHHHHHHHHHH--HTTTSCEEEEEECCCCCCCCTTSCCCCTTTSCHHHH
T ss_pred cccCcCCCCCHHHHHHHCCCeEEEEC--CHHHHHHHHHHHHH--hcCCCcEEEEEEeCCCCCCCcccchhhhhhhhHHHH
Confidence 1112245689999999999999998 67788877777762 1468999999999 6667899999999998665
Q ss_pred -hHHHHHhcCChHHHHHHHHHHcCCCCHHHH
Q 016926 286 -EIEWWRTTQDPVTRFRKWIESNGWWNGDIE 315 (380)
Q Consensus 286 -e~~~~~~~~DPi~~~~~~L~~~g~~t~~e~ 315 (380)
+...|+ .+||+.+|+++|.+.|+|++++.
T Consensus 568 ~~~~~~~-~~d~~~~~~~~l~~~g~~~~~~~ 597 (603)
T 4feg_A 568 EAFKQRY-EAQDLQPLSTYLKQFGLDDLQHQ 597 (603)
T ss_dssp HHHHHHH-TCTTCCCHHHHHHHTTC------
T ss_pred HHHHhhC-CcccCCchHHHHHHcCCchhhhh
Confidence 556665 49999999999999999988754
No 24
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.76 E-value=5.2e-18 Score=181.00 Aligned_cols=140 Identities=20% Similarity=0.211 Sum_probs=124.1
Q ss_pred CccccCCCCCCccccCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcch---HHHHHHHHHHcCC-CEEEEEEc
Q 016926 127 MPIHYGSNKHNYFTVSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSAVTEA-PVIFICRN 202 (380)
Q Consensus 127 ~~~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~---~~Eal~~A~~~~L-pvi~vv~N 202 (380)
.++|+....+|+...+|+||+|++.|+|+|+ .+++..|+|++|||+.++|. .||+.+++..++| +||.|+++
T Consensus 159 ~pgHp~~~tpGve~~tG~LGqGls~AvG~A~----~~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~~~l~nl~~i~D~ 234 (845)
T 3ahc_A 159 IPSHFAPETPGSIHEGGELGYALSHAYGAVM----NNPSLFVPCIIGDGEAETGPLATGWQSNKLVNPRTDGIVLPILHL 234 (845)
T ss_dssp BCSSCCTTSTTCSCCCSSTTCHHHHHHHHHT----TCTTCEEEEEEETTGGGSHHHHHHGGGGGSCCTTTSCEEEEEEEE
T ss_pred CCCCCCCCCCCeecCCCCccchHhHHhhhhh----cCCCCeEEEEECCCchhhhcchhhhHHhhhhhhhcCCCEEEEEEC
Confidence 8899976668999999999999999999994 46788999999999999999 9999999999999 79999999
Q ss_pred CCcccccccccc-cCCcCHHHHHhhcCceEE-EEeC-C--CHHHHHHHHHHHHH-----------Hhhc--cCCc--EEE
Q 016926 203 NGWAISTPISDQ-FRSDGAVVKGRAYGVRSI-RVDG-N--DALAIYSAVHAARE-----------MAIG--EGRP--ILI 262 (380)
Q Consensus 203 N~~~~~~~~~~~-~~~~~~~~~a~a~G~~~~-~VdG-~--D~~av~~a~~~a~~-----------~ar~--~~gP--~lI 262 (380)
|+++|+.++... .+..++.+++++|||.++ .||| | |+.++..++.+|++ .+|+ .++| ++|
T Consensus 235 N~~~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w~~I 314 (845)
T 3ahc_A 235 NGYKIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFYPML 314 (845)
T ss_dssp CSBSSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCEEEE
T ss_pred CCCcCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCeEE
Confidence 999999998643 456789999999999999 9999 9 99999998876663 2444 3689 999
Q ss_pred EEEeecCC
Q 016926 263 EALTYRVG 270 (380)
Q Consensus 263 e~~t~R~~ 270 (380)
.++|.+.+
T Consensus 315 i~rT~kG~ 322 (845)
T 3ahc_A 315 IFRTPKGW 322 (845)
T ss_dssp EEECCTTT
T ss_pred EEECcccC
Confidence 99999999
No 25
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.69 E-value=6.9e-17 Score=168.99 Aligned_cols=121 Identities=17% Similarity=0.200 Sum_probs=101.2
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEE-cCCcccccccccc-----
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR-NNGWAISTPISDQ----- 214 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~-NN~~~~~~~~~~~----- 214 (380)
..|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++||. ||+|++.......
T Consensus 411 ~~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~q~~~~~~~ 484 (590)
T 1v5e_A 411 LFATMGIAIPGGLGAKNTY----PDRQVWNIIGDGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKNL 484 (590)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGTTSSSCCSC
T ss_pred CCCcccChHHHHHHHHHhC----CCCeEEEEEechHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHHHHHhcCCC
Confidence 4699999999999999985 57899999999999876 5889999999999666665 5578887643221
Q ss_pred ----cCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 016926 215 ----FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (380)
Q Consensus 215 ----~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~ 270 (380)
....|+.+++++||+++++|+ +++++.+++++|++.+|. ++|+|||+.|+|..
T Consensus 485 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~-~gp~liev~~~~~~ 541 (590)
T 1v5e_A 485 FGVDFTDVDYAKIAEAQGAKGFTVS--RIEDMDRVMAEAVAANKA-GHTVVIDCKITQDR 541 (590)
T ss_dssp CCCCCCCCCHHHHHHHTTSEEEEEC--BHHHHHHHHHHHHHHHHT-TCCEEEEEECCSCC
T ss_pred ccccCCCCCHHHHHHHcCCEEEEEC--CHHHHHHHHHHHHHhcCC-CCCEEEEEEecccc
Confidence 234689999999999999998 789999999999876554 79999999998754
No 26
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.67 E-value=6.9e-17 Score=169.74 Aligned_cols=122 Identities=20% Similarity=0.187 Sum_probs=100.6
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcC-Ccccccccc-------
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS------- 212 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN-~~~~~~~~~------- 212 (380)
..|++|+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++||.|| +|++.....
T Consensus 440 ~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 513 (616)
T 2pan_A 440 QAGPLGWTIPAALGVCAAD----PKRNVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDY 513 (616)
T ss_dssp TTCCTTCHHHHHHHHHHHC----TTCEEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHGGGGTCCC
T ss_pred CcccccchHHHHHHHHHhC----CCCcEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHHHHHHhcCCc
Confidence 3689999999999999985 57899999999999875 578999999999976655555 588754311
Q ss_pred -------c--ccC----CcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 016926 213 -------D--QFR----SDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (380)
Q Consensus 213 -------~--~~~----~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~ 270 (380)
. ... ..++.+++++||+++++|+ +++++.+++++|++++|..++|+|||+.|.|..
T Consensus 514 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 514 CVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVF--KPEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp SCBCCCCCTTCGGGTTCCCCHHHHHHHTTCEEEEEC--SGGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred cccccccccccccCCCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 0 111 2689999999999999998 789999999999987777789999999999865
No 27
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.65 E-value=1.9e-16 Score=164.57 Aligned_cols=117 Identities=18% Similarity=0.239 Sum_probs=97.1
Q ss_pred CcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCcccccccc-------c
Q 016926 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS-------D 213 (380)
Q Consensus 142 ~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~-------~ 213 (380)
.|+||+++|.|+|+|+|.| +++++|||++|||+++++ +++|++|+++++|+++|| +||+|++....+ .
T Consensus 418 ~g~~G~~l~~AiGaa~a~~--~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 493 (563)
T 2uz1_A 418 LGSMGVGFGTALGAQVADL--EAGRRTILVTGDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLHFQQLAVGPNR 493 (563)
T ss_dssp TCCTTTHHHHHHHHHHHHH--HHTCEEEEEEEHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCTTC
T ss_pred CccccChHHHHHHHHHHhh--CCCCeEEEEEccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHHHHHHhcCCCc
Confidence 5899999999999999986 567899999999999886 468999999999966655 555788765421 1
Q ss_pred c----cCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 016926 214 Q----FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 214 ~----~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R 268 (380)
. ....++.+++++||+++++|+ +++++.+++++|++ .++|+|||+.|++
T Consensus 494 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 546 (563)
T 2uz1_A 494 VTGTRLENGSYHGVAAAFGADGYHVD--SVESFSAALAQALA----HNRPACINVAVAL 546 (563)
T ss_dssp CCSCBCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH----SSSCEEEEEECCS
T ss_pred ccCCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHH----CCCCEEEEEEecc
Confidence 1 134689999999999999998 88999999888875 5899999999974
No 28
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.65 E-value=6.4e-17 Score=168.16 Aligned_cols=121 Identities=14% Similarity=0.163 Sum_probs=98.0
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCcccccccc------c
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------D 213 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~------~ 213 (380)
..|+||+++|.|+|+|+|.+.++.+++|||++|||+|+++ +++|++|++++||+++|| +||+|++..... .
T Consensus 411 ~~g~mG~~l~~A~Gaala~~~~~~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 488 (563)
T 2vk8_A 411 LWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLT--VQEISTMIRWGLKPYLFVLNNDGYTIQKLIHGPKAQYN 488 (563)
T ss_dssp TTCCTTHHHHHHHHHHHHHHHHCTTCCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGG
T ss_pred chhhhhhHHHHHHHHHHhCcccCCCCCEEEEEcchHhhcc--HHHHHHHHHcCCCcEEEEEECCcchhhhhhhCCCCCcc
Confidence 4699999999999999999888888999999999999864 677999999999966666 555688865321 1
Q ss_pred ccCCcCHHHHHhhcCce---EEEEeCCCHHHHHHHHH-HHHHHhhccCCcEEEEEEeec
Q 016926 214 QFRSDGAVVKGRAYGVR---SIRVDGNDALAIYSAVH-AAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 214 ~~~~~~~~~~a~a~G~~---~~~VdG~D~~av~~a~~-~a~~~ar~~~gP~lIe~~t~R 268 (380)
.....++.+++++||++ +++|+ +++++.++++ ++++ ..++|+|||+.|.+
T Consensus 489 ~~~~~d~~~~a~a~G~~~~~~~~v~--~~~el~~al~~~a~~---~~~~p~liev~~~~ 542 (563)
T 2vk8_A 489 EIQGWDHLSLLPTFGAKDYETHRVA--TTGEWDKLTQDKSFN---DNSKIRMIEVMLPV 542 (563)
T ss_dssp CCCCCCGGGHHHHTTCSSEEEEEEC--BHHHHHHHHTCTTTT---SCSSEEEEEEECCT
T ss_pred cCCCCCHHHHHHHhCCCCCcEEEec--CHHHHHHHHHHHHHh---CCCCcEEEEEEeCc
Confidence 12346899999999999 99999 7888888887 5553 23479999999975
No 29
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.64 E-value=1.8e-16 Score=163.53 Aligned_cols=114 Identities=23% Similarity=0.337 Sum_probs=94.3
Q ss_pred cccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcC-Cccccccccc--------
Q 016926 143 STIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPISD-------- 213 (380)
Q Consensus 143 g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN-~~~~~~~~~~-------- 213 (380)
|+||+++|.|+|+++|. ++++|||++|||+|+++ +++|++|+++++|+++||.|| +|++.+....
T Consensus 401 g~~G~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~ 474 (528)
T 1q6z_A 401 GGLGFALPAAIGVQLAE----PERQVIAVIGDGSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVP 474 (528)
T ss_dssp CCTTSHHHHHHHHHHHC----TTSCEEEEEEHHHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCCSCC
T ss_pred ccccchHHHHHHHHHhC----CCCcEEEEECCcHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHHhcCCCcc
Confidence 99999999999999985 46789999999999987 688999999999977777655 5888654311
Q ss_pred --ccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 016926 214 --QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 214 --~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R 268 (380)
.....++.+++++||+++++|+ +.+++.+++++++ +.++|+|||+.|.|
T Consensus 475 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~----~~~gp~liev~~~~ 525 (528)
T 1q6z_A 475 GLDVPGIDFRALAKGYGVQALKAD--NLEQLKGSLQEAL----SAKGPVLIEVSTVS 525 (528)
T ss_dssp SCBCCCCCHHHHHHHHTCEEEEES--SHHHHHHHHHHHH----TCSSCEEEEEEBCC
T ss_pred cCCCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHH----HCCCcEEEEEEecC
Confidence 1134689999999999999999 6678877777665 36899999999975
No 30
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.64 E-value=1.9e-16 Score=164.87 Aligned_cols=117 Identities=20% Similarity=0.260 Sum_probs=96.5
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcC-Ccccccccc-------
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPIS------- 212 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN-~~~~~~~~~------- 212 (380)
..|+||+++|.|+|+|+|. ++++|||++|||+++++ +++|++|.++++|+++||.|| +|++.....
T Consensus 418 g~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 491 (566)
T 1ozh_A 418 GQQTMGVALPWAIGAWLVN----PERKVVSVSGDGGFLQS--SMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQRL 491 (566)
T ss_dssp TTCCTTCHHHHHHHHHHHS----TTSEEEEEEEHHHHHHH--TTHHHHHHHHTCCEEEEEEECSBCHHHHHHHHHHHSSC
T ss_pred CcccccchHHHHHHHHHhC----CCCCEEEEEcChHHhcc--HHHHHHHHHhCCCcEEEEEECCchhHHHHHHHHhcCCC
Confidence 3689999999999999985 57899999999999874 577999999999977766555 688765432
Q ss_pred --cccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecC
Q 016926 213 --DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 269 (380)
Q Consensus 213 --~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~ 269 (380)
......++.+++++||+++++|+ +++++.++++++++ .++|+|||+.|+|.
T Consensus 492 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~ 544 (566)
T 1ozh_A 492 SGVEFGPMDFKAYAESFGAKGFAVE--SAEALEPTLRAAMD----VDGPAVVAIPVDYR 544 (566)
T ss_dssp CSCBCCCCCHHHHHHTTTSEEEECC--SGGGHHHHHHHHHH----SSSCEEEEEEBCCT
T ss_pred ccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEeCCC
Confidence 12334689999999999999998 78889888888875 58999999999763
No 31
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.63 E-value=3.1e-16 Score=163.44 Aligned_cols=116 Identities=25% Similarity=0.318 Sum_probs=95.8
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCcccccccc-------
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------- 212 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~------- 212 (380)
..|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++|| +||+|++.....
T Consensus 434 g~g~mG~~l~~AiGaa~a~----~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 507 (573)
T 2iht_A 434 GCSSFGYGIPAAIGAQMAR----PDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIELYQNIGHHRS 507 (573)
T ss_dssp SSCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHHSSC
T ss_pred CCcccccHHHHHHHHHHhC----CCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHHHHHHhcCCC
Confidence 3689999999999999985 47889999999999876 578999999999966555 555688776421
Q ss_pred ----cccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 016926 213 ----DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 213 ----~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R 268 (380)
......++.+++++||+++++|+ +.+++.++++++++ .++|+|||+.|.|
T Consensus 508 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~ 561 (573)
T 2iht_A 508 HDPAVKFGGVDFVALAEANGVDATRAT--NREELLAALRKGAE----LGRPFLIEVPVNY 561 (573)
T ss_dssp CGGGTBCCCCCHHHHHHHTTCEEEECC--SHHHHHHHHHHHHT----SSSCEEEEEEBCC
T ss_pred cCccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEECCC
Confidence 22334689999999999999998 88888888887764 5899999999988
No 32
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.62 E-value=8.7e-16 Score=159.27 Aligned_cols=118 Identities=20% Similarity=0.268 Sum_probs=94.0
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCcccccccc-------
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------- 212 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~------- 212 (380)
..|+||.++|.|+|+++|. ++++|||++|||+|+++ +++|++|.++++|+++|| +||+|++.....
T Consensus 404 ~~g~mG~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~~~~~~~~~~ 477 (549)
T 3eya_A 404 NHGSMANAMPQALGAQATE----PERQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYLT 477 (549)
T ss_dssp TTCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC-----------
T ss_pred CCchhhhHHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHHHHHhcCCCC
Confidence 4589999999999999985 57899999999999765 577999999999965555 555687643211
Q ss_pred --cccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 016926 213 --DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (380)
Q Consensus 213 --~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~ 270 (380)
......|+.+++++||+++++|+ +++++.++++++++ .+||+|||+.|.|..
T Consensus 478 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~----~~gp~liev~~~~~~ 531 (549)
T 3eya_A 478 DGTELHDTNFARIAEACGITGIRVE--KASEVDEALQRAFS----IDGPVLVDVVVAKEE 531 (549)
T ss_dssp -CCBCCCCCHHHHHHHTTSEEEEEC--SGGGHHHHHHHHHH----SSSCEEEEEEBCCCC
T ss_pred cCCcCCCCCHHHHHHHcCCcEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecccc
Confidence 11234689999999999999997 88888888888775 589999999998753
No 33
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.62 E-value=2.9e-16 Score=164.14 Aligned_cols=118 Identities=21% Similarity=0.276 Sum_probs=97.4
Q ss_pred CcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEE-cCCcccccccc--------
Q 016926 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR-NNGWAISTPIS-------- 212 (380)
Q Consensus 142 ~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~-NN~~~~~~~~~-------- 212 (380)
.|+||+++|.|+|+++|. ++++|||++|||+|+++ +++|++|+++++|+++||. ||+|++.....
T Consensus 423 ~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 496 (589)
T 2pgn_A 423 EGILGCGFPMALGAQLAE----PNSRVFLGTGDGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTLMNHQFGQNN 496 (589)
T ss_dssp TCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHHSSCC
T ss_pred cchhhhHHHHHHHHHHhC----CCCcEEEEEeeHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHHHHhhcCCCc
Confidence 589999999999999985 57899999999999875 5889999999999666665 45588766432
Q ss_pred -cccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCC
Q 016926 213 -DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGH 271 (380)
Q Consensus 213 -~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~g 271 (380)
......|+.+++++||+++++|+ +++++.++++++++ .++|+|||+.|+|..+
T Consensus 497 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~~~ 550 (589)
T 2pgn_A 497 WTEFMNPDWVGIAKAFGAYGESVR--ETGDIAGALQRAID----SGKPALIEIPVSKTQG 550 (589)
T ss_dssp SCBCCCCCHHHHHHHHTCEEEECT--TTCCHHHHHHHHHH----HCSCEEEEEECCSSSS
T ss_pred cccCCCCCHHHHHHHCCCeEEEEC--CHHHHHHHHHHHHh----CCCCEEEEEEecCCCC
Confidence 12235789999999999999998 67788888888875 4799999999998653
No 34
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.62 E-value=5e-16 Score=164.84 Aligned_cols=118 Identities=18% Similarity=0.210 Sum_probs=96.4
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCcccccccc-----c-
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS-----D- 213 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~-----~- 213 (380)
..|+||+++|.|+|+++|. ++++|||++|||+|+++ +++|++|+++++|+++|| +||+|++..... .
T Consensus 511 ~~G~mG~~lpaAiGaalA~----p~~~Vv~i~GDGsf~~~--~~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~~~~~~~~ 584 (677)
T 1t9b_A 511 GLGTMGYGLPAAIGAQVAK----PESLVIDIDGDASFNMT--LTELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEHR 584 (677)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHHTCCCEEEEEECSSCHHHHHHHHHHSTTC
T ss_pred CcchhhchHHHHHHHHHhC----CCCeEEEEEeehHHhcc--HHHHHHHHHhCCCeEEEEEeCCCchhhhhhhhhhcCCC
Confidence 3589999999999999984 67899999999999864 566999999999966555 555688754321 1
Q ss_pred ----ccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 016926 214 ----QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (380)
Q Consensus 214 ----~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~ 270 (380)
.....|+.+++++||+++++|+ +++++.++++++++ .++|+|||+.|.|..
T Consensus 585 ~~~~~~~~~d~~~la~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~lIev~~~~~~ 639 (677)
T 1t9b_A 585 YSHTHQLNPDFIKLAEAMGLKGLRVK--KQEELDAKLKEFVS----TKGPVLLEVEVDKKV 639 (677)
T ss_dssp CCSCCCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH----CSSCEEEEEEBCSSC
T ss_pred cccCcCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHH----CCCcEEEEEEecCCc
Confidence 1234689999999999999997 88999998888875 579999999999864
No 35
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.61 E-value=9e-16 Score=159.78 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=94.5
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCcccccccc------c
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------D 213 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~------~ 213 (380)
..|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|+++++|+++|| +||+|++..... .
T Consensus 423 ~~g~mG~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 496 (570)
T 2vbf_A 423 LWGSIGYTFPAALGSQIAD----KESRHLLFIGDGSLQLT--VQELGLSIREKLNPICFIINNDGYTVEREIHGPTQSYN 496 (570)
T ss_dssp TTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGG
T ss_pred cchhhhhhHHHHHHHHHhC----CCCcEEEEEcchhhhcC--HHHHHHHHHcCCCCEEEEEECCchHHHHHHhccCCCcc
Confidence 4699999999999999985 57899999999999874 567999999999866555 566798865332 1
Q ss_pred ccCCcCHHHHHhhcCce-----EEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 016926 214 QFRSDGAVVKGRAYGVR-----SIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 214 ~~~~~~~~~~a~a~G~~-----~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R 268 (380)
.....|+.+++++||++ +++|+ +++++.++++++. ++.++|+|||+.|+|
T Consensus 497 ~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~---~~~~~p~liev~~~~ 551 (570)
T 2vbf_A 497 DIPMWNYSKLPETFGATEDRVVSKIVR--TENEFVSVMKEAQ---ADVNRMYWIELVLEK 551 (570)
T ss_dssp CCCCCCGGGHHHHTTCCTTTEEEEEEC--BHHHHHHHHHHHH---HCTTSEEEEEEECCT
T ss_pred CCCCCCHHHHHHHcCCCcCCcceEEec--CHHHHHHHHHHHH---hcCCCcEEEEEEcCc
Confidence 12346899999999998 89998 7888888888742 346899999999976
No 36
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.60 E-value=1.7e-15 Score=158.42 Aligned_cols=119 Identities=21% Similarity=0.224 Sum_probs=96.9
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCcccccccc-------
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------- 212 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~------- 212 (380)
..|++|+++|.|+|+++|. ++++|||++|||+|+++ +++|++|+++++|+++|| +||+|++.....
T Consensus 424 ~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 497 (590)
T 1ybh_A 424 GLGAMGFGLPAAIGASVAN----PDAIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKAN 497 (590)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHHHHHHHSTTC
T ss_pred CcccccchHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHHHHHHhcCCc
Confidence 3589999999999999985 47899999999999875 568999999999966655 555788764311
Q ss_pred ---cc--c------CCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCC
Q 016926 213 ---DQ--F------RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGH 271 (380)
Q Consensus 213 ---~~--~------~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~g 271 (380)
.. . ...|+.+++++||+++++|+ +++++.+++++|++ .++|+|||+.|.|...
T Consensus 498 ~~~~~~~~p~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~~~ 561 (590)
T 1ybh_A 498 RAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVT--KKADLREAIQTMLD----TPGPYLLDVICPHQEH 561 (590)
T ss_dssp CCSCBCSCGGGTTSCSSCHHHHHHHTTCCEEEEC--BHHHHHHHHHHHHH----SSSCEEEEEECCTTCC
T ss_pred cccccccccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecCCcc
Confidence 00 1 13589999999999999998 88999888888875 4799999999998654
No 37
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.60 E-value=8.7e-16 Score=159.75 Aligned_cols=117 Identities=22% Similarity=0.268 Sum_probs=96.0
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEE-EEEcCCccccccccc----cc
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF-ICRNNGWAISTPISD----QF 215 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~-vv~NN~~~~~~~~~~----~~ 215 (380)
..|+||+++|.|+|+|+|. ++++|||++|||+++++ +++|++|+++++|+++ |++||+|++...... ..
T Consensus 407 ~~g~mG~~l~~A~G~ala~----~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 480 (566)
T 2vbi_A 407 QWGHIGWSVPSAFGNAMGS----QDRQHVVMVGDGSFQLT--AQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYI 480 (566)
T ss_dssp TTCCTTTHHHHHHHHHHTC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCC
T ss_pred cccchhhHHHHHHHHHHhC----CCCcEEEEEcchHHHhh--HHHHHHHHHhCCCcEEEEEECCcceEEEeeccCCccCC
Confidence 3689999999999999985 57899999999999874 5679999999998555 555668988765432 22
Q ss_pred CCcCHHHHHhhcCc-----eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 016926 216 RSDGAVVKGRAYGV-----RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 216 ~~~~~~~~a~a~G~-----~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R 268 (380)
...|+.+++++||+ ++++|+ +++++.++++++++. .++|+|||+.|.|
T Consensus 481 ~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~~~---~~gp~liev~~~~ 533 (566)
T 2vbi_A 481 KNWDYAGLMEVFNAGEGHGLGLKAT--TPKELTEAIARAKAN---TRGPTLIECQIDR 533 (566)
T ss_dssp CCCCTTTHHHHHHTTTCCCEEEEEC--SHHHHHHHHHHHHHC---CSSCEEEEEECCT
T ss_pred CCCCHHHHHHHcCCCCCCccEEEeC--CHHHHHHHHHHHHhc---CCCcEEEEEEeCc
Confidence 34689999999999 999998 789998888888752 2799999999976
No 38
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.60 E-value=1e-15 Score=159.28 Aligned_cols=115 Identities=19% Similarity=0.198 Sum_probs=94.6
Q ss_pred CcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCcccccccc-----ccc
Q 016926 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS-----DQF 215 (380)
Q Consensus 142 ~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~-----~~~ 215 (380)
.|+||.++|.|+|+|+|. ++++|||++|||+|+ +.+++|++|+++++|+++|| +||+|++..... ...
T Consensus 421 ~g~mG~~l~~A~G~ala~----~~~~vv~i~GDG~~~--~~~~~l~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~ 494 (565)
T 2nxw_A 421 YAGMGFGVPAGIGAQCVS----GGKRILTVVGDGAFQ--MTGWELGNCRRLGIDPIVILFNNASWEMLRTFQPESAFNDL 494 (565)
T ss_dssp TCCTTCHHHHHHHHHHHT----TTCCEEEEEEHHHHH--HHGGGGGGHHHHTCCCEEEEEECSBCHHHHHHCTTCGGGBC
T ss_pred cccccccchHHHHHHHhC----CCCcEEEEEechHHH--hhHHHHHHHHHhCCCCEEEEEECCCCcEEeeecccCCCCcC
Confidence 589999999999999995 578899999999998 46788999999999966555 555688754321 123
Q ss_pred CCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE-EEEEEeec
Q 016926 216 RSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI-LIEALTYR 268 (380)
Q Consensus 216 ~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~-lIe~~t~R 268 (380)
...++.+++++||+++++|+ +++++.++++++++ .++|+ |||+.|+|
T Consensus 495 ~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~~liev~~~~ 542 (565)
T 2nxw_A 495 DDWRFADMAAGMGGDGVRVR--TRAELKAALDKAFA----TRGRFQLIEAMIPR 542 (565)
T ss_dssp CCCCHHHHTGGGTSEEEEEC--BHHHHHHHHHHHHH----CCSSCEEEEEECCT
T ss_pred CCCCHHHHHHHcCCCEEEeC--CHHHHHHHHHHHHh----cCCCeEEEEEEccc
Confidence 45689999999999999998 78899888888875 46898 99999975
No 39
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.59 E-value=1.7e-15 Score=157.66 Aligned_cols=117 Identities=20% Similarity=0.239 Sum_probs=96.2
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEE-EEEcCCccccccccc----cc
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF-ICRNNGWAISTPISD----QF 215 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~-vv~NN~~~~~~~~~~----~~ 215 (380)
..|+||+++|.|+|+|+|. ++++|||++|||+|+++ +++|++|.++++|+++ |++||+|++...... ..
T Consensus 411 ~~g~~G~~l~~A~G~ala~----~~~~vv~i~GDGs~~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 484 (568)
T 2wvg_A 411 QWGHIGWSVPAAFGYAVGA----PERRNILMVGDGSFQLT--AQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNI 484 (568)
T ss_dssp TTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCC
T ss_pred CcchhhhHHHHHHHHHHhC----CCCcEEEEEcChhHhcc--HHHHHHHHHcCCCcEEEEEECCcceEeeeeccCCCcCC
Confidence 4689999999999999985 57899999999999863 6679999999998655 556677988765432 22
Q ss_pred CCcCHHHHHhhcCc---------eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 016926 216 RSDGAVVKGRAYGV---------RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 216 ~~~~~~~~a~a~G~---------~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R 268 (380)
...++.+++++||+ ++++|+ +.+++.++++++++. .++|+|||+.|+|
T Consensus 485 ~~~d~~~~a~a~G~~~~~~~~~~~~~~v~--~~~el~~al~~a~~~---~~gp~liev~~~~ 541 (568)
T 2wvg_A 485 KNWDYAGLMEVFNGNGGYDSGAGKGLKAK--TGGELAEAIKVALAN---TDGPTLIECFIGR 541 (568)
T ss_dssp CCCCHHHHHHHHHCTTSSSCCCCEEEEES--BHHHHHHHHHHHHHC---CSSCEEEEEECCT
T ss_pred CCCCHHHHHHHhCCCcccccCCcceEEeC--CHHHHHHHHHHHHhc---CCCcEEEEEEcCc
Confidence 34689999999999 999998 789999998888752 2799999999976
No 40
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.59 E-value=2.8e-15 Score=156.00 Aligned_cols=116 Identities=18% Similarity=0.162 Sum_probs=95.1
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCC-c-cccccc--cc---
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-W-AISTPI--SD--- 213 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~-~-~~~~~~--~~--- 213 (380)
..|+||+++|.|+|+++| ++++|||++|||+|++. +++|++|+++++|+++||.||+ | ++.... ..
T Consensus 424 ~~g~~G~~l~~AiGaala-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 496 (568)
T 2c31_A 424 TWGVMGIGMGYCVAAAAV-----TGKPVIAVEGDSAFGFS--GMELETICRYNLPVTVIIMNNGGIYKGNEADPQPGVIS 496 (568)
T ss_dssp TTTCSSCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEESSBSSCSCCCCSBTTBCC
T ss_pred CCccccccHHHHHHHHhC-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHhhcCCcc
Confidence 468999999999999998 56889999999999764 5779999999999888887776 3 443211 00
Q ss_pred --ccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecC
Q 016926 214 --QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 269 (380)
Q Consensus 214 --~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~ 269 (380)
.....++.+++++||+++++|+ +++++.++++++++ .++|+|||+.|.|.
T Consensus 497 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~~p~liev~~~~~ 548 (568)
T 2c31_A 497 CTRLTRGRYDMMMEAFGGKGYVAN--TPAELKAALEEAVA----SGKPCLINAMIDPD 548 (568)
T ss_dssp TTBCCCCCHHHHHHTTTCEEEEES--SHHHHHHHHHHHHH----HTSCEEEEEEBCTT
T ss_pred cCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEeccc
Confidence 0345689999999999999998 89999999988875 47999999999874
No 41
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.59 E-value=8.4e-16 Score=159.30 Aligned_cols=116 Identities=19% Similarity=0.211 Sum_probs=93.6
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCcccccccc------c
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPIS------D 213 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~------~ 213 (380)
..|+||+++|.|+|+++|. ++++|||++|||+++++ +++|.+|.++++|+++|| +||+|++..... .
T Consensus 406 ~~g~mG~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 479 (552)
T 1ovm_A 406 LWGSIGYTLAAAFGAQTAC----PNRRVIVLTGDGAAQLT--IQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYN 479 (552)
T ss_dssp TTCCTTHHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--TTHHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGG
T ss_pred hhHhhhhHHHHHHHHHHhC----CCCcEEEEECchHHHhH--HHHHHHHHHhCCCCEEEEEECCCCeEEEeeccCCCCcc
Confidence 3689999999999999985 47899999999999864 677999999999966655 555688874321 1
Q ss_pred ccCCcCHHHHHhhcCc----eEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 016926 214 QFRSDGAVVKGRAYGV----RSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 214 ~~~~~~~~~~a~a~G~----~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R 268 (380)
.....|+.+++++||+ ++++|+ +++++.+++++++ +.++|+|||+.|.+
T Consensus 480 ~~~~~d~~~~a~a~G~~~~~~~~~v~--~~~~l~~al~~a~----~~~gp~liev~~~~ 532 (552)
T 1ovm_A 480 DIALWNWTHIPQALSLDPQSECWRVS--EAEQLADVLEKVA----HHERLSLIEVMLPK 532 (552)
T ss_dssp CCCCCCGGGSTTTSCSSCCEEEEEEC--BHHHHHHHHHHHT----TCSSEEEEEEECCT
T ss_pred cCCCCCHHHHHHHhCCCcCCCEEEeC--CHHHHHHHHHHHH----hCCCCEEEEEEcCc
Confidence 1234689999999999 999998 7888888777664 46899999999975
No 42
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.58 E-value=6.2e-15 Score=153.20 Aligned_cols=117 Identities=14% Similarity=0.093 Sum_probs=94.9
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCC-c-cccccc---c---
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-W-AISTPI---S--- 212 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~-~-~~~~~~---~--- 212 (380)
..|+||+++|.|+|+++| ++++|||++|||+|++. +++|++|+++++|+++||.||+ | ++.... .
T Consensus 419 ~~g~~G~~l~~AiGaa~a-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 491 (564)
T 2q28_A 419 TWGVMGIGMGYAIGASVT-----SGSPVVAIEGDSAFGFS--GMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAP 491 (564)
T ss_dssp TTTCTTCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEECSBSSCSCCCCTTSSCCC
T ss_pred CCCcccchHHHHHHHhhc-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHHhccCCc
Confidence 468999999999999997 57889999999999764 4679999999999888877776 3 443211 0
Q ss_pred c---ccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCC
Q 016926 213 D---QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVG 270 (380)
Q Consensus 213 ~---~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~ 270 (380)
. .....|+.+++++||+++++|+ +++++.++++++++ .++|+|||+.|.|..
T Consensus 492 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~~p~liev~~~~~~ 546 (564)
T 2q28_A 492 SPTDLLHHARYDKLMDAFRGVGYNVT--TTDELRHALTTGIQ----SRKPTIINVVIDPAA 546 (564)
T ss_dssp CTTBCCTTCCGGGGGGGGTCEEEEEC--SHHHHHHHHHHHHH----HTSCEEEEEEBCTTS
T ss_pred cccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh----CCCCEEEEEEecccc
Confidence 0 1124689999999999999998 88999999988875 479999999998753
No 43
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.53 E-value=3.2e-15 Score=156.77 Aligned_cols=114 Identities=18% Similarity=0.058 Sum_probs=90.7
Q ss_pred CcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEE-EcCCccccccccc-------
Q 016926 142 SSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFIC-RNNGWAISTPISD------- 213 (380)
Q Consensus 142 ~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv-~NN~~~~~~~~~~------- 213 (380)
.+++|+++|.|+|+|+|. +++|||++|||+|+++ +++|++|+++++|+++|| +||+|++......
T Consensus 454 ~~~ig~~l~~AiGaala~-----~~~vv~i~GDGsf~~~--~~eL~ta~~~~lp~~ivv~NN~~~~i~~~~~~~q~~~~~ 526 (604)
T 2x7j_A 454 ANGIDGVVSSAMGVCEGT-----KAPVTLVIGDLSFYHD--LNGLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTHF 526 (604)
T ss_dssp TCCSSSHHHHHHHHHHHH-----TSCEEEEEEHHHHHHT--GGGGHHHHHHCCCEEEEEEECSSCGGGGGSGGGSCHHHH
T ss_pred cCCcCcHHHHHHHHHhcC-----CCcEEEEEccHHHHhH--HHHHHHhhhcCCCeEEEEEeCCCCcccccCCCCccchhh
Confidence 467899999999999983 6789999999999875 466999999999977665 5557887542211
Q ss_pred -----ccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 016926 214 -----QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 214 -----~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R 268 (380)
.....|+.+++++||+++++|+ +++++.+++++++ +.++|+|||+.|.|
T Consensus 527 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~----~~~gp~liev~~~~ 580 (604)
T 2x7j_A 527 EDLFGTPTGLDFKHAAALYGGTYSCPA--SWDEFKTAYAPQA----DKPGLHLIEIKTDR 580 (604)
T ss_dssp HHHTTCCCCCCTHHHHHHTTCEEECCS--SHHHHHHHCCCCC----SSCCEEEEEEECCH
T ss_pred HhhccCCCCCCHHHHHHHcCCeEEecC--CHHHHHHHHHHHH----hCCCCEEEEEECCc
Confidence 1124689999999999999998 7888877776665 45899999999864
No 44
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.50 E-value=1.4e-14 Score=150.36 Aligned_cols=114 Identities=18% Similarity=0.114 Sum_probs=86.0
Q ss_pred cCcccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCC-ccccccc-------c
Q 016926 141 VSSTIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTPI-------S 212 (380)
Q Consensus 141 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~-~~~~~~~-------~ 212 (380)
..|++|. +|.|+|+++| ++++|||++|||+|++. .++|++|+++++|+++||.||+ |++.... .
T Consensus 415 ~~g~~G~-l~~A~Gaa~a-----~~~~vv~i~GDGsf~~~--~~eL~ta~~~~lpv~ivv~NN~~~~~~~~~~~~~~~~~ 486 (556)
T 3hww_A 415 ASGIDGL-LSTAAGVQRA-----SGKPTLAIVGDLSALYD--LNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERE 486 (556)
T ss_dssp SCCSSSH-HHHHHHHHHH-----HCCCEEEEEEHHHHHHT--GGGHHHHTTCSSCEEEEEEESCC---------------
T ss_pred ccccccH-HHHHHHHHhc-----CCCcEEEEEccHHhhhc--chhhHhhcccCCCcEEEEEECCCCCcccCCCCcchhHH
Confidence 3456666 9999999998 36889999999999754 4569999999999888777776 5654321 1
Q ss_pred ---cccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeec
Q 016926 213 ---DQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYR 268 (380)
Q Consensus 213 ---~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R 268 (380)
......|+.++|++||+++++|+ +.+++.+++++++ +.+||+|||+.|.|
T Consensus 487 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~----~~~gp~liev~~~~ 539 (556)
T 3hww_A 487 RFYLMPQNVHFEHAAAMFELKYHRPQ--NWQELETAFADAW----RTPTTTVIEMVVND 539 (556)
T ss_dssp --CCCCCCCCSHHHHHHTTCEEECCS--SHHHHHHHHHHHT----TSSSEEEEEEECCS
T ss_pred HhccCCCCCCHHHHHHHcCCcEEecC--CHHHHHHHHHHHH----hCCCCEEEEEECCc
Confidence 11235789999999999999998 7788877777665 46899999999854
No 45
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.47 E-value=2.7e-14 Score=148.88 Aligned_cols=111 Identities=16% Similarity=0.065 Sum_probs=79.1
Q ss_pred cccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcC-Cccccccc---c------c-
Q 016926 145 IATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN-GWAISTPI---S------D- 213 (380)
Q Consensus 145 lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN-~~~~~~~~---~------~- 213 (380)
+|+++|.|+|+|+ ++++|||++|||+|++. .++|++|+++++|+++||.|| +|++.... . .
T Consensus 438 ~~g~l~~AiGaa~------~~~~vv~i~GDGsf~~~--~~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~~~~~~~~~~~ 509 (578)
T 3lq1_A 438 IDGVVSSALGASV------VFQPMFLLIGDLSFYHD--MNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESL 509 (578)
T ss_dssp SSSHHHHHHHHTT------TSSSEEEEEEHHHHHHT--GGGGHHHHHTTCCEEEEEECCC--------------------
T ss_pred cccHHHHHHHHhc------CCCCEEEEEchHHHHhh--HHHHHhhccCCCCeEEEEEECCcCccccccccccccchhhhh
Confidence 3446999999863 37899999999999754 467999999999988877766 57765421 0 0
Q ss_pred --ccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecC
Q 016926 214 --QFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRV 269 (380)
Q Consensus 214 --~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~ 269 (380)
.....|+.++|++||+++++|+ +.+++.++++++++ .+||+|||+.|.|.
T Consensus 510 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~----~~gp~liev~~~~~ 561 (578)
T 3lq1_A 510 FGTSTELDFRFAAAFYDADYHEAK--SVDELEEAIDKASY----HKGLDIIEVKTNRH 561 (578)
T ss_dssp -----CCCTHHHHHHTTCEEEECC--SHHHHHHHHHHHTT----SSSEEEEEEC----
T ss_pred ccCCCCCCHHHHHHHcCCceEecC--CHHHHHHHHHHHHh----CCCCEEEEEECCcc
Confidence 0123589999999999999998 88888888877764 58999999998763
No 46
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=98.96 E-value=2.2e-09 Score=120.25 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=76.6
Q ss_pred CCeeEEEeCcc-ccCcchHHHHHHHHHHcCCCEEEEEEcCC-cccccccccc----------------cCCcCHHHHHhh
Q 016926 165 DACAVTYFGDG-GTSEGDFHAALNFSAVTEAPVIFICRNNG-WAISTPISDQ----------------FRSDGAVVKGRA 226 (380)
Q Consensus 165 ~~~vv~~~GDG-~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~-~~~~~~~~~~----------------~~~~~~~~~a~a 226 (380)
++.|||+.||| ++++|. .+|.+|.++++||++||.||+ |++...+... ....|+.++|++
T Consensus 953 ~~~Vv~i~GDG~~~~mg~--~eL~ta~~~~~~v~iiVlnN~~yg~tg~Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA~a 1030 (1231)
T 2c42_A 953 KKSVWIFGGDGWAYDIGY--GGLDHVLASGEDVNVFVMDTEVYSNTGGQSSKATPTGAVAKFAAAGKRTGKKDLARMVMT 1030 (1231)
T ss_dssp CCEEEEEEEHHHHHTTTH--HHHHHHHHTTCSCEEEEEECSSBTTTTCBCCTTSCTTCCBBTBTTCCSSCCCCHHHHHHT
T ss_pred CCcEEEEeCcHHHHHcch--HHHHHHHHhCCCeEEEEEECHHHHhHHhhhccCCCCCceeeecccCCCCCchhHHHHHHH
Confidence 47899999999 888773 469999999999888777665 5554422110 122589999999
Q ss_pred cCceEEEE-eC-CCHHHHHHHHHHHHHHhhccCCcEEEEEEeecC
Q 016926 227 YGVRSIRV-DG-NDALAIYSAVHAAREMAIGEGRPILIEALTYRV 269 (380)
Q Consensus 227 ~G~~~~~V-dG-~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~ 269 (380)
||++++.+ .- .++.++..++++|++ .+||+||++.+.-.
T Consensus 1031 ~G~~~va~~~v~~~~~~l~~al~eAl~----~~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1031 YGYVYVATVSMGYSKQQFLKVLKEAES----FPGPSLVIAYATCI 1071 (1231)
T ss_dssp TSSSEEEEECTTTCHHHHHHHHHHHHH----SSSCEEEEEECCCG
T ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHh----cCCCEEEEEeecCc
Confidence 99999964 33 499999999999986 48999999987554
No 47
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=95.08 E-value=0.095 Score=53.94 Aligned_cols=110 Identities=17% Similarity=0.115 Sum_probs=78.7
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+. +.-.+++|..|=|.++ ..-++..|..-++|||+|.-+......... ......|....++.+-
T Consensus 61 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~v~~A~~~~~Pll~itg~~~~~~~~~~-~~~Q~~d~~~~~~~~~ 133 (573)
T 2iht_A 61 GVAADVLARIT---GRPQACWATLGPGMTN---LSTGIATSVLDRSPVIALAAQSESHDIFPN-DTHQCLDSVAIVAPMS 133 (573)
T ss_dssp HHHHHHHHHHH---CSCEEEEECTTHHHHH---HHHHHHHHHHHTCCEEEEEEESCGGGCCTT-TSTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEEccCchHHH---HHHHHHHHHhhCCCEEEEcccCcccccCCc-CccccCCHHHHHHhHh
Confidence 34566766553 4445667777888776 556788888899999999987654433220 1122246778888887
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEee
Q 016926 229 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 267 (380)
Q Consensus 229 ~~~~~VdG~D~~av~~a~~~a~~~ar~~~-gP~lIe~~t~ 267 (380)
-....+. +++++...+++|+..+..++ ||+.|++-..
T Consensus 134 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 171 (573)
T 2iht_A 134 KYAVELQ--RPHEITDLVDSAVNAAMTEPVGPSFISLPVD 171 (573)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHTBSSCCCEEEEEEHH
T ss_pred hEEEEcC--CHHHHHHHHHHHHHHHhcCCCceEEEEecch
Confidence 7777776 88889999999998888876 9999998764
No 48
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=95.06 E-value=0.093 Score=54.20 Aligned_cols=108 Identities=19% Similarity=0.188 Sum_probs=78.4
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|...++|||+|+-+-....... ......|....++.+-
T Consensus 63 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~g~--~~~Q~~d~~~~~~~~~ 134 (590)
T 1ybh_A 63 VFAAEGYARSS---GKPGICIATSGPGATN---LVSGLADALLDSVPLVAITGQVPRRMIGT--DAFQETPIVEVTRSIT 134 (590)
T ss_dssp HHHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTT--TCTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEeccCchHHH---HHHHHHHHHhhCCCEEEEeCcCCccccCC--CcccccCHHHHHHHHh
Confidence 44677777653 4456777778888886 45668888899999999987665432221 1122246778888887
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEe
Q 016926 229 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 266 (380)
Q Consensus 229 ~~~~~VdG~D~~av~~a~~~a~~~ar~~~-gP~lIe~~t 266 (380)
-...++. +++++..++++|+..++.+. ||+.|++-.
T Consensus 135 k~~~~v~--~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~ 171 (590)
T 1ybh_A 135 KHNYLVM--DVEDIPRIIEEAFFLATSGRPGPVLVDVPK 171 (590)
T ss_dssp SEEEECC--CGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred CeEEecC--CHHHHHHHHHHHHHHHhhCCCceEEEEeCc
Confidence 7777776 88899999999998888764 899998865
No 49
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=95.05 E-value=0.11 Score=53.41 Aligned_cols=109 Identities=19% Similarity=0.110 Sum_probs=78.2
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCC-cCHHHHHhhc
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRS-DGAVVKGRAY 227 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~-~~~~~~a~a~ 227 (380)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|...++|||+|+-+-......... ... .|....++.+
T Consensus 54 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~~--~Q~~~d~~~~~~~~ 125 (563)
T 2uz1_A 54 GHAAEGYARAG---AKLGVALVTAGGGFTN---AVTPIANAWLDRTPVLFLTGSGALRDDETNT--LQAGIDQVAMAAPI 125 (563)
T ss_dssp HHHHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTSCC--TTCCCCHHHHHGGG
T ss_pred HHHHHHHHHHh---CCCEEEEEccCccHHH---HHHHHHHHHhcCCCEEEEeCCCCcccCCchh--hhhhccHHHHhhhh
Confidence 34567776653 4445667777888887 3456777888999999999876543322211 122 4677888888
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEee
Q 016926 228 GVRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 267 (380)
Q Consensus 228 G~~~~~VdG~D~~av~~a~~~a~~~ar~~~-gP~lIe~~t~ 267 (380)
--...++. +++++...+.+|+..+..++ ||+.|++-..
T Consensus 126 tk~~~~v~--~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 126 TKWAHRVM--ATEHIPRLVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp CSEEEECC--CGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred hceEEEcC--CHHHHHHHHHHHHHHhcCCCCceEEEEeCHH
Confidence 77778876 88889999999998888775 9999988654
No 50
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=94.96 E-value=0.092 Score=53.99 Aligned_cols=109 Identities=15% Similarity=0.025 Sum_probs=76.7
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+. +.-.+++|..|=|.++ ..-++..|..-++|||+|+-+-......... ....|....++.+-
T Consensus 61 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~vPll~itg~~~~~~~~~~~--~Q~~d~~~~~~~~t 132 (566)
T 1ozh_A 61 AFMAAAVGRIT---GKAGVALVTSGPGCSN---LITGMATANSEGDPVVALGGAVKRADKAKQV--HQSMDTVAMFSPVT 132 (566)
T ss_dssp HHHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTC--------CCCHHHHHGGGC
T ss_pred HHHHHHHHHHH---CCCEEEEEccChHHHH---HHHHHHHHHhcCCCEEEEeCCCccccCCCCc--ccccCHHHHHHHHh
Confidence 34566776553 4445667777888887 4566778888899999999776543322111 12246778888887
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEee
Q 016926 229 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 267 (380)
Q Consensus 229 ~~~~~VdG~D~~av~~a~~~a~~~ar~~~-gP~lIe~~t~ 267 (380)
-....+. +++++...+++|+..+..++ ||+.|++-..
T Consensus 133 k~~~~v~--~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~d 170 (566)
T 1ozh_A 133 KYAIEVT--APDALAEVVSNAFRAAEQGRPGSAFVSLPQD 170 (566)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred heEEEcC--CHHHHHHHHHHHHHHHhcCCCCeEEEEeChh
Confidence 7778886 88889999999998888774 9999988654
No 51
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=94.83 E-value=0.16 Score=52.50 Aligned_cols=108 Identities=18% Similarity=0.123 Sum_probs=76.5
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccccccc-ccccCCcCHHHHHhhc
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI-SDQFRSDGAVVKGRAY 227 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~-~~~~~~~~~~~~a~a~ 227 (380)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|||+|.-+-........ ..+ ..|... ++.+
T Consensus 56 a~~A~GyAr~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~Q--~~d~~~-~~~~ 126 (589)
T 2pgn_A 56 AWMVNGYNYVK---DRSAAVGAWHCVGNLL---LHAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQ--QVPWQS-FTPI 126 (589)
T ss_dssp HHHHHHHHHHH---TSCCEEEEEEGGGGGG---CHHHHHHHHHTTCCEEEEEEESCGGGTTCTTCSS--CCCGGG-GTTT
T ss_pred HHHHHHHHHHH---CCCEEEEEecCchHHH---HHHHHHHHHhcCCCEEEEecCCcccccCCCCccc--ccChhh-cccc
Confidence 34567776553 4556888899999997 456688889999999999987654332221 111 224555 6666
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEee
Q 016926 228 GVRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 267 (380)
Q Consensus 228 G~~~~~VdG~D~~av~~a~~~a~~~ar~~~-gP~lIe~~t~ 267 (380)
--...++. +++++...+.+|+..+..++ ||+.|++-..
T Consensus 127 tk~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 165 (589)
T 2pgn_A 127 ARSTQRVE--RLDKVGEAIHEAFRVAEGHPAGPAYVDIPFD 165 (589)
T ss_dssp SSEEEECC--SGGGHHHHHHHHHHHHTSSSCCEEEEEEETH
T ss_pred EEEEeecC--CHHHHHHHHHHHHHHHhcCCCccEEEEeCHh
Confidence 65666676 88889999999998888776 9999988653
No 52
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=94.46 E-value=0.16 Score=52.13 Aligned_cols=110 Identities=19% Similarity=0.099 Sum_probs=74.1
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccccccc---ccc---cCCcCHHH
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SDQ---FRSDGAVV 222 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~---~~~---~~~~~~~~ 222 (380)
.-+|.|.|.+. + -.+++|..|=|+++ ..-++..|...++|||+|+-+-........ ... ....+...
T Consensus 54 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~ 126 (566)
T 2vbi_A 54 GFSAEGYARSN---G-AAAAVVTFSVGAIS---AMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLE 126 (566)
T ss_dssp HHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHHH
T ss_pred HHHHHHHHhhc---C-CeEEEEeCCCCHHH---HHHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCcchHHHHH
Confidence 44677776653 4 45566666777776 456677788899999999987654322110 010 01125677
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 016926 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 267 (380)
Q Consensus 223 ~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~ 267 (380)
.++.+--....+. +++++...+++|+..+..+.||+.|++-..
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~l~~A~~~a~~~~GPV~l~iP~d 169 (566)
T 2vbi_A 127 MARQVTCAAESIT--DAHSAPAKIDHVIRTALRERKPAYLDIACN 169 (566)
T ss_dssp HHHTTCSEEEEEC--SSSSHHHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHhhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 8888877777886 666677778888777777789999998653
No 53
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=94.45 E-value=0.19 Score=51.65 Aligned_cols=110 Identities=16% Similarity=0.077 Sum_probs=76.4
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccccccc---ccc---cCCcCHHH
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SDQ---FRSDGAVV 222 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~---~~~---~~~~~~~~ 222 (380)
.-+|.|.|.+. + ..+++|..|=|+++ ..-++..|...++|||+|+-+-........ ... ....+...
T Consensus 54 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~ 126 (568)
T 2wvg_A 54 GFSAEGYARAK---G-AAAAVVTYSVGALS---AFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLE 126 (568)
T ss_dssp HHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHH
T ss_pred HHHHHHHHHhh---C-CeEEEEeCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHH
Confidence 44677777653 4 45677777888776 456677788899999999987654322110 010 01125677
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 016926 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 267 (380)
Q Consensus 223 ~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~ 267 (380)
.++.+--....+. +++++...+.+|+..+..+.||+.|++-..
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~l~~A~~~A~~~~GPV~l~iP~d 169 (568)
T 2wvg_A 127 MAKNITAAAEAIY--TPEEAPAKIDHVIKTALREKKPVYLEIACN 169 (568)
T ss_dssp HHTTSCSCEEEEC--SGGGHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred HHHhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 8888877778887 788888888888888887889999998753
No 54
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=94.36 E-value=0.13 Score=52.61 Aligned_cols=109 Identities=16% Similarity=0.176 Sum_probs=75.9
Q ss_pred HHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCc
Q 016926 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (380)
Q Consensus 150 p~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (380)
-+|.|.|.+. +...+++|..|=|+++ ..-++..|..-++|||+|.-+-...............|....++.+--
T Consensus 59 ~~A~Gyar~t---g~pgv~~~TsGpG~~N---~~~gi~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk 132 (564)
T 2q28_A 59 YAAAASGFLT---QKPGICLTVSAPGFLN---GLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAK 132 (564)
T ss_dssp HHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTSCCTTCCCHHHHHGGGSS
T ss_pred HHHHHHHHHh---CCCEEEEEccCchHHH---HHHHHHHHHhcCCCEEEEeCCCCccccCCCCCccccccHHHHHHHhhh
Confidence 4566776553 4445677777888776 556677888899999999987654322210111222466778888877
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEEe
Q 016926 230 RSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALT 266 (380)
Q Consensus 230 ~~~~VdG~D~~av~~a~~~a~~~ar~~-~gP~lIe~~t 266 (380)
....+. +++.+...+.+|+..+..+ .||+.|++-.
T Consensus 133 ~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 168 (564)
T 2q28_A 133 AAFRVN--QPQDLGIALARAIRVSVSGRPGGVYLDLPA 168 (564)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred eeeecC--CHHHHHHHHHHHHHHHhcCCCceEEEEcCH
Confidence 777776 7888888999999888874 5999998864
No 55
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=94.35 E-value=0.15 Score=52.15 Aligned_cols=108 Identities=14% Similarity=-0.039 Sum_probs=75.7
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|||+|.-+-....... ......|....++.+-
T Consensus 54 a~~A~GyAr~t---g~~~v~~~TsGpG~~N---~~~gi~~A~~~~vPvl~itg~~~~~~~~~--~~~Q~~d~~~~~~~~t 125 (549)
T 3eya_A 54 AFAAGAEAQLS---GELAVCAGSCGPGNLH---LINGLFDCHRNHVPVLAIAAHIPSSEIGS--GYFQETHPQELFRECS 125 (549)
T ss_dssp HHHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEESCGGGTTS--CCTTCCCHHHHTSTTC
T ss_pred HHHHHHHHHHh---CCCEEEEeCCCCcHhh---hHHHHHHHHhhCCCEEEEeCCCchhhcCC--CCCCccCHHHHHhhhh
Confidence 34566776553 4456677778888887 34668888899999999997654322111 1111246677777776
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 016926 229 VRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (380)
Q Consensus 229 ~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t 266 (380)
-....+. +++++...+.+|+..+....||+.|++-.
T Consensus 126 k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 161 (549)
T 3eya_A 126 HYCELVS--SPEQIPQVLAIAMRKAVLNRGVSVVVLPG 161 (549)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHHTTSEEEEEEEH
T ss_pred heEEEeC--CHHHHHHHHHHHHHHHhhCCCCEEEEeCh
Confidence 6677776 78888888999988888888999999754
No 56
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=94.24 E-value=0.17 Score=53.32 Aligned_cols=107 Identities=18% Similarity=0.159 Sum_probs=76.9
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|||+|+-+-....... ......|....++.+-
T Consensus 133 a~aAdGyAr~t---Gkpgvv~~TsGpG~~N---~~~gia~A~~d~vPllvItG~~~~~~~g~--~a~Q~~Dq~~i~~~~t 204 (677)
T 1t9b_A 133 GHMAEGYARAS---GKPGVVLVTSGPGATN---VVTPMADAFADGIPMVVFTGQVPTSAIGT--DAFQEADVVGISRSCT 204 (677)
T ss_dssp HHHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTTTS--CCTTCCCHHHHTGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEECCChHHHH---HHHHHHHHHHcCCCEEEEeCCCChhhcCC--CCccccCHHHHhhhhe
Confidence 34677777653 4456777888888887 45667788888999999997654332211 1112236667777776
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEE
Q 016926 229 VRSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEAL 265 (380)
Q Consensus 229 ~~~~~VdG~D~~av~~a~~~a~~~ar~~-~gP~lIe~~ 265 (380)
-....|. +++++...+++|+..+..+ .||+.|++-
T Consensus 205 k~~~~v~--~~~~i~~~i~~A~~~A~~grpGPV~l~lP 240 (677)
T 1t9b_A 205 KWNVMVK--SVEELPLRINEAFEIATSGRPGPVLVDLP 240 (677)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEE
T ss_pred eEEEEcC--CHHHHHHHHHHHHHHHhhCCCceEEEEcC
Confidence 6677776 8899999999999888876 589999987
No 57
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=94.09 E-value=0.14 Score=52.50 Aligned_cols=109 Identities=19% Similarity=0.140 Sum_probs=70.6
Q ss_pred HHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccc---cccCCcC-HHHHHh
Q 016926 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS---DQFRSDG-AVVKGR 225 (380)
Q Consensus 150 p~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~---~~~~~~~-~~~~a~ 225 (380)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|||+|+-+-......... .+....+ ....++
T Consensus 73 ~~A~GyAr~t---gkp~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~ 146 (565)
T 2nxw_A 73 FAADAAARYS---STLGVAAVTYGAGAFN---MVNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFK 146 (565)
T ss_dssp HHHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTCC--CCCC-------CHHHHHHT
T ss_pred HHHHHHHHHh---CCCeEEEECCCCCHHH---HHHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHHH
Confidence 4577777653 4445666777888876 4566778888999999999774332211100 0001123 556777
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 016926 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (380)
Q Consensus 226 a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t 266 (380)
.+--....+. +++++...+.+|+..+..+.||+.|++-.
T Consensus 147 ~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 185 (565)
T 2nxw_A 147 EITVAQARLD--DPAKAPAEIARVLGAARAQSRPVYLEIPR 185 (565)
T ss_dssp TSCSCEEECC--CTTTHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred hhheEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEECCh
Confidence 7766677776 66677777778877777678999999974
No 58
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=94.06 E-value=0.15 Score=52.42 Aligned_cols=109 Identities=15% Similarity=0.108 Sum_probs=75.2
Q ss_pred HHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCc
Q 016926 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (380)
Q Consensus 150 p~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (380)
-+|.|.|.+. +...+++|..|=|+++ ..-++..|..-++|||+|.-+-...............|....++.+--
T Consensus 61 ~~A~GyAr~t---g~pgv~~~TsGpG~~N---~~~~i~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk 134 (568)
T 2c31_A 61 YAASIAGYIE---GKPGVCLTVSAPGFLN---GVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPHCK 134 (568)
T ss_dssp HHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTCCCHHHHSGGGSS
T ss_pred HHHHHHHHHh---CCCEEEEEcCCccHHH---HHHHHHHHHhcCCCEEEEccCCCccccCCCCCcccccCHHHHHHhhhh
Confidence 3566776553 4445677777888776 556788888899999999987654322210111122366677777776
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHHhhc-cCCcEEEEEEe
Q 016926 230 RSIRVDGNDALAIYSAVHAAREMAIG-EGRPILIEALT 266 (380)
Q Consensus 230 ~~~~VdG~D~~av~~a~~~a~~~ar~-~~gP~lIe~~t 266 (380)
....+. +++.+...+.+|+..+.. ..||+.|++-.
T Consensus 135 ~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 170 (568)
T 2c31_A 135 ASFRIN--SIKDIPIGIARAVRTAVSGRPGGVYVDLPA 170 (568)
T ss_dssp EEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEET
T ss_pred eeeecC--CHHHHHHHHHHHHHHhcCCCCceEEEeCCH
Confidence 777776 788888899999988887 45999998754
No 59
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=93.93 E-value=0.14 Score=53.04 Aligned_cols=107 Identities=20% Similarity=0.060 Sum_probs=74.2
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+ .+.-.+++|..|=|.++ ..-++..|...++|+|+|+-+.......... ....|....++.+-
T Consensus 56 a~~A~GyAr~---tgk~~v~~~tsGpG~~N---~~~gl~~A~~~~vPll~Itg~~p~~~~g~~~--~Q~~d~~~~~~~~t 127 (590)
T 1v5e_A 56 AMAAVMQSKF---GGNLGVTVGSGGPGASH---LINGLYDAAMDNIPVVAILGSRPQRELNMDA--FQELNQNPMYDHIA 127 (590)
T ss_dssp HHHHHHHHHT---TCCCCEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTTC--TTCCCCHHHHHTTC
T ss_pred HHHHHHHHHH---HCCCEEEEeCcChHHHH---HHHHHHHHHhcCCCEEEEcCCCCcccCCCCc--ccccCHHHHHHhhc
Confidence 4456666654 34445667777888876 4556777888899999999876543322111 11235667777776
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEe
Q 016926 229 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALT 266 (380)
Q Consensus 229 ~~~~~VdG~D~~av~~a~~~a~~~ar~~~-gP~lIe~~t 266 (380)
-....+. +++++...+++|+..+..++ ||+.| +-.
T Consensus 128 k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l-iP~ 163 (590)
T 1v5e_A 128 VYNRRVA--YAEQLPKLVDEAARMAIAKRGVAVLE-VPG 163 (590)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHHTTSEEEEE-EET
T ss_pred cEEEEeC--CHHHHHHHHHHHHHHHhcCCCceEEE-Ecc
Confidence 6677776 88889999999998888877 89999 644
No 60
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=93.78 E-value=0.059 Score=53.08 Aligned_cols=113 Identities=14% Similarity=0.160 Sum_probs=64.4
Q ss_pred chHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccccc-ccccccCCcCHHHHHh-
Q 016926 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST-PISDQFRSDGAVVKGR- 225 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~-~~~~~~~~~~~~~~a~- 225 (380)
.+.+|+|+|++ ..+.++...|.|-.. ..+.|..++..++|+|+++-+....... +.....+ ..+..+..
T Consensus 76 a~~~a~Gaa~a-----G~r~~~~ts~~G~~~---~~d~l~~aa~~~~P~Vi~~~~~~~~~~g~~~~~~~s-d~~~~~~~~ 146 (395)
T 1yd7_A 76 SIAAAIGASWA-----GAKAMTATSGPGFSL---MQENIGYAVMTETPVVIVDVQRSGPSTGQPTLPAQG-DIMQAIWGT 146 (395)
T ss_dssp HHHHHHHHHHT-----TCCEEEEEETTHHHH---HTTTCC----CCCCEEEEEEC-------------------------
T ss_pred HHHHHHHHHHh-----CCcEEEEeCchHHHH---HHHHHHHHHhcCCCEEEEEeeCCCCCCCCCcccchh-HHHHHHhcc
Confidence 35667777765 245677777888764 3455666778889999988765433211 1111110 11122322
Q ss_pred --hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCC
Q 016926 226 --AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 273 (380)
Q Consensus 226 --a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs 273 (380)
.+|++++... ++.+++..+..|++.+++.+.|+++....+ . +|+
T Consensus 147 ~g~~g~~vl~p~--~~qea~~l~~~A~~lA~~~~~PVi~~~~~~-l-~h~ 192 (395)
T 1yd7_A 147 HGDHSLIVLSPS--TVQEAFDFTIRAFNLSEKYRTPVILLTDAE-V-GHM 192 (395)
T ss_dssp --CCCCEEECCC--SHHHHHHHHHHHHHHHHHHTSEEEEEECHH-H-HHC
T ss_pred CCCcceEEEeCC--CHHHHHHHHHHHHHHHHHHCCCEEEEcchh-H-hCe
Confidence 2467777666 999999999999988888889999987764 2 455
No 61
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=93.59 E-value=0.15 Score=52.74 Aligned_cols=108 Identities=15% Similarity=0.059 Sum_probs=71.1
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|||+|+-+-....... ......|....++.+-
T Consensus 63 a~aA~GyAr~t---g~~gv~~~TsGpG~~N---~~~gia~A~~~~vPvl~itG~~~~~~~~~--~~~Q~~d~~~~~~~~t 134 (603)
T 4feg_A 63 AMAAAADAKLT---GKIGVCFGSAGPGGTH---LMNGLYDAREDHVPVLALIGQFGTTGMNM--DTFQEMNENPIYADVA 134 (603)
T ss_dssp HHHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTTTTS--CCTTCCCCGGGGTTTC
T ss_pred HHHHHHHHHHh---CCceEEEecCCchHHH---HHHHHHHHHHcCCCEEEEecCCcccccCC--CccccccHHHHhhhhc
Confidence 34566776553 4455677777888887 44668888899999999986543221111 1111224556666666
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 016926 229 VRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (380)
Q Consensus 229 ~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t 266 (380)
-....+. +++.+...+.+|+..+....||+.|++-.
T Consensus 135 k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 170 (603)
T 4feg_A 135 DYNVTAV--NAATLPHVIDEAIRRAYAHQGVAVVQIPV 170 (603)
T ss_dssp SEEEECC--CSTTHHHHHHHHHHHHHHHTSEEEEEEET
T ss_pred eEEEEcC--CHHHHHHHHHHHHHHHhcCCCCEEEEeCh
Confidence 6666775 66667777777777776678999998754
No 62
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=92.45 E-value=0.23 Score=51.45 Aligned_cols=109 Identities=12% Similarity=0.008 Sum_probs=71.4
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|||+|.-+-......... ....|....++.+-
T Consensus 82 a~aA~GyAr~t---gkpgv~~~TsGpG~~N---~~~gia~A~~~~vPlv~ItG~~~~~~~g~~~--~Q~~d~~~~~~~~t 153 (604)
T 2x7j_A 82 GFFALGLAKAK---QRPVLLICTSGTAAAN---FYPAVVEAHYSRVPIIVLTADRPHELREVGA--PQAINQHFLFGNFV 153 (604)
T ss_dssp HHHHHHHHHHH---TSCEEEEECSSHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGSSSCC--TTCCCCTTTTGGGS
T ss_pred HHHHHHHHHhh---CCCEEEEECChhHHHH---HHHHHHHHhhcCCCEEEEeCCCCHHHhCCCC--CCcCcHHHHhhhhe
Confidence 34567776553 4456777777888887 4566788888999999999765443221111 11234445566665
Q ss_pred ceEEEEeCCCHHH-------HHHHHHHHHHHhhcc-CCcEEEEEEee
Q 016926 229 VRSIRVDGNDALA-------IYSAVHAAREMAIGE-GRPILIEALTY 267 (380)
Q Consensus 229 ~~~~~VdG~D~~a-------v~~a~~~a~~~ar~~-~gP~lIe~~t~ 267 (380)
-....|. ++++ +...+++|+..+..+ .||+.|++-..
T Consensus 154 k~~~~v~--~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 154 KFFTDSA--LPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp SCEEECC--CCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECC
T ss_pred eeeeecC--CCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccC
Confidence 5566665 4443 777888888877774 69999998754
No 63
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=92.16 E-value=0.73 Score=47.71 Aligned_cols=109 Identities=16% Similarity=0.141 Sum_probs=75.4
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+.. ++-.++++..|=|+++ ..-++..|..-++|||+|+-+-........ .....|....++.+-
T Consensus 78 a~~A~GyAr~tg--g~~~v~~~TsGpG~~N---~~~~l~~A~~~~vPlvvItg~~p~~~~~~~--~~Q~~d~~~~~~~~t 150 (616)
T 2pan_A 78 SHMAEGYTRATA--GNIGVCLGTSGPAGTD---MITALYSASADSIPILCITGQAPRARLHKE--DFQAVDIEAIAKPVS 150 (616)
T ss_dssp HHHHHHHHHHST--TCCEEEEECSTHHHHT---SHHHHHHHHHTTCCEEEEEEECCGGGTTTT--CTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHhcC--CCceEEEeCCCchHHH---HHHHHHHHHhcCCCEEEEecCCcccccCcc--cccccCHHHHHHHHH
Confidence 345667765520 2334556677888776 346677888889999999977654332211 112346778888887
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhcc-CCcEEEEEEe
Q 016926 229 VRSIRVDGNDALAIYSAVHAAREMAIGE-GRPILIEALT 266 (380)
Q Consensus 229 ~~~~~VdG~D~~av~~a~~~a~~~ar~~-~gP~lIe~~t 266 (380)
-....+. ++.++...+++|+..++.+ .||+.|++-.
T Consensus 151 k~~~~v~--~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 151 KMAVTVR--EAALVPRVLQQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp SEEEECC--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEH
T ss_pred HhhcccC--CHHHHHHHHHHHHHHHhcCCCceEEEEcch
Confidence 7777776 7888999999999888776 4899998865
No 64
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=92.16 E-value=0.61 Score=48.56 Aligned_cols=100 Identities=17% Similarity=0.120 Sum_probs=64.5
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccc--ccccccccCCcCHHHHHhh
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~--~~~~~~~~~~~~~~~~a~a 226 (380)
+++|+|+|+ .+..+++++.++++.. ..++.+.+++..++|+++++..-+++. .++++. +..+++-...-
T Consensus 368 v~~a~G~A~----~G~~~~~~~~f~~Fl~---~a~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH~--~~ed~a~l~~i 438 (616)
T 3mos_A 368 VSIAVGCAT----RNRTVPFCSTFAAFFT---RAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQM--ALEDLAMFRSV 438 (616)
T ss_dssp HHHHHHHHG----GGCCEEEEEEEGGGGG---GGHHHHHHHHHTTCCEEEEEESBSGGGCTTCGGGC--BSSHHHHHHTS
T ss_pred HHHHHHHHH----cCCCCEEEEehHHHHH---HHHHHHHHHHHhCCCeEEEEECCCccccCCCCccc--CHHHHHHhcCC
Confidence 344455544 3433466778998875 356778888899999999988777643 334332 33444433333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
-|+.++.- .|+.++..+++.|++ .++|++|.
T Consensus 439 P~l~V~~P--~d~~e~~~~l~~a~~----~~gp~~ir 469 (616)
T 3mos_A 439 PTSTVFYP--SDGVATEKAVELAAN----TKGICFIR 469 (616)
T ss_dssp TTEEEECC--CSHHHHHHHHHHHHT----CCSEEEEE
T ss_pred CCCEEEec--CCHHHHHHHHHHHHh----cCCCEEEE
Confidence 36665543 489999988888875 37898774
No 65
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=92.14 E-value=0.44 Score=48.72 Aligned_cols=109 Identities=13% Similarity=0.048 Sum_probs=71.5
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccccc---cccc---ccCCcCHHH
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAIST---PISD---QFRSDGAVV 222 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~---~~~~---~~~~~~~~~ 222 (380)
.-+|.|.|.+. + ..+++|..|=|+++ ..-++..|..-++|||+|+-+-...... .... .....+...
T Consensus 55 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~ 127 (563)
T 2vk8_A 55 AYAADGYARIK---G-MSCIITTFGVGELS---ALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHR 127 (563)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHH
T ss_pred HHHHHHHHHhh---C-CcEEEEcCCCcHHH---HHHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcchHHHHH
Confidence 34677777664 4 34677777888876 4566778888999999999765432210 0000 011124567
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 016926 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (380)
Q Consensus 223 ~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t 266 (380)
.++.+--....+. +++++...+.+|+..+..+.||+.|++-.
T Consensus 128 ~~~~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 169 (563)
T 2vk8_A 128 MSANISETTAMIT--DIATAPAEIDRCIRTTYVTQRPVYLGLPA 169 (563)
T ss_dssp HHHTTCSEEEECC--CTTTHHHHHHHHHHHHHHHTSCEEEEEET
T ss_pred HhhhhEEEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 7777777777776 66666667777776666667999999865
No 66
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=91.89 E-value=0.28 Score=49.82 Aligned_cols=110 Identities=20% Similarity=0.041 Sum_probs=71.0
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcC
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYG 228 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G 228 (380)
.-+|.|.|.+. +...+++|..|=|.++ ..-++..|...++|||+|+-+-..........+. ..|....++.+-
T Consensus 51 a~~A~Gyar~t---g~~~v~~~tsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~q~-~~d~~~~~~~~~ 123 (528)
T 1q6z_A 51 VGIADGYAQAS---RKPAFINLHSAAGTGN---AMGALSNAWNSHSPLIVTAGQQTRAMIGVEALLT-NVDAANLPRPLV 123 (528)
T ss_dssp HHHHHHHHHHH---TSCEEEEEEHHHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHTTTCTTC-CTTGGGSSTTSC
T ss_pred HHHHHHHHHHh---CCCEEEEEcCChHHHH---HHHHHHHHhhcCCCEEEEeCCCcccccCCCcccc-cccHHHHHHHhh
Confidence 44677777653 4445666777888875 3456777888999999998765432221111111 024555555554
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhccC-CcEEEEEEee
Q 016926 229 VRSIRVDGNDALAIYSAVHAAREMAIGEG-RPILIEALTY 267 (380)
Q Consensus 229 ~~~~~VdG~D~~av~~a~~~a~~~ar~~~-gP~lIe~~t~ 267 (380)
-...++. +++++...+.+|+..+..++ ||+.|++-..
T Consensus 124 k~~~~v~--~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d 161 (528)
T 1q6z_A 124 KWSYEPA--SAAEVPHAMSRAIHMASMAPQGPVYLSVPYD 161 (528)
T ss_dssp SCEECCS--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEGG
T ss_pred HhhhcCC--CHHHHHHHHHHHHHHHhcCCCCcEEEEechh
Confidence 4455555 77778888888888777665 7999998764
No 67
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=91.84 E-value=0.79 Score=48.15 Aligned_cols=101 Identities=11% Similarity=0.009 Sum_probs=66.2
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccc--ccccccccCCcCHHHHHhh
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~--~~~~~~~~~~~~~~~~a~a 226 (380)
+++|.|+|+. +.-+++++.+...+. ..++++..++..++||++++...+++. .+++. .+..+++-...-
T Consensus 415 v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tH--q~~edla~lr~i 485 (669)
T 2r8o_A 415 TAIANGISLH----GGFLPYTSTFLMFVE---YARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTH--QPVEQVASLRVT 485 (669)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---TTHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCeEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCCcCcCCCCCcc--CCHHHHHHhcCC
Confidence 4566676654 323455666655443 245778889999999999998877763 34444 233444443333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
-|+.++.- .|..++..+++.|++. .++|++|-
T Consensus 486 P~l~V~~P--ad~~E~~~~l~~a~~~---~~~Pv~i~ 517 (669)
T 2r8o_A 486 PNMSTWRP--CDQVESAVAWKYGVER---QDGPTALI 517 (669)
T ss_dssp TTCEEECC--SSHHHHHHHHHHHHHC---SSSCEEEE
T ss_pred CCCEEEec--CCHHHHHHHHHHHHHh---CCCcEEEE
Confidence 47766654 4899999999999863 37899984
No 68
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=91.75 E-value=0.69 Score=48.45 Aligned_cols=102 Identities=15% Similarity=0.085 Sum_probs=67.2
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccc--ccccccccCCcCHHHHHhh
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~--~~~~~~~~~~~~~~~~a~a 226 (380)
+++|.|+|+. +.-++++..+.=.+. -.++++..++..++||++++.+.+++. .+++. .+..+++-...-
T Consensus 410 ~~~a~GlA~~----Gg~~P~~~t~~~F~~---~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tH--q~~edla~lr~i 480 (651)
T 2e6k_A 410 GAILNGLNLH----GGYRAYGGTFLVFSD---YMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTH--QPVEHLMSLRAM 480 (651)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---GSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEeHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCcCcc--ccHHHHHHhcCC
Confidence 4567777664 323556665533321 245778889999999999998888764 34444 234444443333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
-|+.++.-- |..++..+++.|++. .++|++|-.
T Consensus 481 P~l~V~~Pa--d~~E~~~~l~~A~~~---~~~Pv~i~~ 513 (651)
T 2e6k_A 481 PNLFVIRPA--DAYETFYAWLVALRR---KEGPTALVL 513 (651)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred CCcEEEecC--CHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 377766654 899999999999863 368998864
No 69
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=91.67 E-value=0.38 Score=50.06 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=67.3
Q ss_pred chHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcc-cccccccccCCcCHHHHHhh
Q 016926 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA-ISTPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~-~~~~~~~~~~~~~~~~~a~a 226 (380)
.+++|.|+|++ + -++++.++++... =.+-..++.++..++|+++++.+.++. -.+++..+ ..+++-...-
T Consensus 373 ~~~~a~G~A~~----G-~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~~g~~G~tH~~--~~d~~~~~~i 443 (621)
T 2o1s_A 373 AVTFAAGLAIG----G-YKPIVAIYSTFLQ--RAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQG--AFDLSYLRCI 443 (621)
T ss_dssp HHHHHHHHHHT----T-CEEEEEEETTGGG--GGHHHHHHTTTTTTCCCEEEEESCBCCCTTCGGGCB--CSHHHHTTTS
T ss_pred HHHHHHHHHHC----C-CEEEEEehHhHHH--HHHHHHHHHHHhcCCCEEEEEECCccCCCCCCccCc--hHHHHHHhcC
Confidence 35567777664 2 4667777887653 223344677888999999999877752 23343332 2333333333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
-|+.++.-. |+.+++..++.|++. .++|++|-.
T Consensus 444 P~l~v~~P~--d~~e~~~~l~~a~~~---~~~Pv~i~~ 476 (621)
T 2o1s_A 444 PEMVIMTPS--DENECRQMLYTGYHY---NDGPSAVRY 476 (621)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred CCCEEEecC--CHHHHHHHHHHHHHc---CCCCEEEEe
Confidence 378777655 999999999999863 378998854
No 70
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=91.65 E-value=0.6 Score=47.80 Aligned_cols=109 Identities=16% Similarity=0.034 Sum_probs=71.8
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccccccc---cc--cc-CCcCHHH
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI---SD--QF-RSDGAVV 222 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~---~~--~~-~~~~~~~ 222 (380)
.-+|.|.|.+. + ..++++..|=|+++ ..-++..|...++|+|+|+-+......... .. .. ...+...
T Consensus 76 ~~~A~GyAr~t---G-~~v~~~tsGpG~~N---~~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (570)
T 2vbf_A 76 SYMADGYARTK---K-AAAFLTTFGVGELS---AINGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHFMK 148 (570)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHHHH
T ss_pred HHHHHHHHHHh---C-CeEEEEcCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeeccccchHHHHH
Confidence 44677777653 4 45677777888775 456677888899999999977654322110 00 00 1123456
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 016926 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 267 (380)
Q Consensus 223 ~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~ 267 (380)
.++.+--....+. + +++...+++|+..+..+.||+.|++...
T Consensus 149 ~~~~~tk~~~~v~--~-~~~~~~l~~A~~~A~~~~GPV~l~iP~d 190 (570)
T 2vbf_A 149 MHEPVTAARTLLT--A-ENATYEIDRVLSQLLKERKPVYINLPVD 190 (570)
T ss_dssp HTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_pred HhhhhEEEEEEEC--c-ccHHHHHHHHHHHHhhCCCCEEEEcchh
Confidence 7777777777776 4 6677777777777666779999998653
No 71
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=91.14 E-value=0.42 Score=49.16 Aligned_cols=109 Identities=10% Similarity=0.078 Sum_probs=68.0
Q ss_pred HHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCc
Q 016926 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (380)
Q Consensus 150 p~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (380)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|||+|.-+-....... ......|....++.+--
T Consensus 63 ~aAdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~p~~~~g~--~~~Qe~d~~~~~~~~tk 134 (578)
T 3lq1_A 63 FFALGLAKAS---KRPVVLLCTSGTAAAN---YFPAVAEANLSQIPLIVLTADRPHELRNV--GAPQAMDQLHLYGSHVK 134 (578)
T ss_dssp HHHHHHHHHH---CCCEEEEECSSHHHHT---THHHHHHHHHTTCCEEEEEEECCGGGTTS--SCTTCCCCTTTTGGGSS
T ss_pred HHHHHHHHhh---CCCEEEEECCchhhhh---hhHHHHHHHhcCCCeEEEeCCCCHHhhcC--CCCCCcCHhhHHhhhee
Confidence 3567777653 4556777778999887 44668888899999999996543322111 11111244455555544
Q ss_pred eEEEEe-CCCHHH----HHHHHHHHHHHhhcc-CCcEEEEEEe
Q 016926 230 RSIRVD-GNDALA----IYSAVHAAREMAIGE-GRPILIEALT 266 (380)
Q Consensus 230 ~~~~Vd-G~D~~a----v~~a~~~a~~~ar~~-~gP~lIe~~t 266 (380)
....|. ..+..+ +..++++|+..|..+ .||+.|++-.
T Consensus 135 ~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 135 DFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp EEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred eEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 555554 334332 345777777777765 5999999874
No 72
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=91.00 E-value=1.1 Score=47.25 Aligned_cols=102 Identities=18% Similarity=0.103 Sum_probs=65.5
Q ss_pred hHHHHHHHHHhhhcC-CCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccc--ccccccccCCcCHHHHHh
Q 016926 149 LPHAVGAAYALKMDR-KDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 225 (380)
Q Consensus 149 lp~A~G~A~A~k~~~-~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~--~~~~~~~~~~~~~~~~a~ 225 (380)
+++|.|+|+ .+ .-++++.++...+. ..++++..++..++||++++...+++. .+++. .+..+++-...
T Consensus 427 v~~a~GlA~----~G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tH--q~~edla~lr~ 497 (675)
T 1itz_A 427 GAICNGIAL----HSPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTH--QPIEHLVSFRA 497 (675)
T ss_dssp HHHHHHHHT----TCTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHS
T ss_pred HHHHHHHHh----cCCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCc--CcHHHHHHhcc
Confidence 345666553 34 24566666655443 356788889999999999997776653 34444 23344443333
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 226 a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
--|+.++. -.|..++..+++.|++. .++|++|-.
T Consensus 498 iP~l~V~~--Pad~~e~~~~l~~a~~~---~~~Pv~i~~ 531 (675)
T 1itz_A 498 MPNILMLR--PADGNETAGAYKVAVLN---RKRPSILAL 531 (675)
T ss_dssp SSSCEEEC--CCSHHHHHHHHHHHHHC---TTSCEEEEE
T ss_pred CCCeEEEE--CCCHHHHHHHHHHHHHh---CCCcEEEEe
Confidence 23655554 35899999999999863 378999854
No 73
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=90.98 E-value=1 Score=47.33 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=67.1
Q ss_pred chHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccc--ccccccccCCcCHHHHHh
Q 016926 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 225 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~--~~~~~~~~~~~~~~~~a~ 225 (380)
.+++|.|+|+. +.-++++.++.+-.. ..++.+.+++..++||+|+....+++. .+++.. +..+++-...
T Consensus 415 ~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~THq--~~ed~a~lr~ 485 (663)
T 3kom_A 415 MAAIMNGLSLY----GGIKPYGGTFLVFSD---YSRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTHQ--PIEHVPSLRL 485 (663)
T ss_dssp HHHHHHHHHHH----SSCEEEEEEEGGGHH---HHHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTC--CSSHHHHHHT
T ss_pred HHHHHHHHHHc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCCcC--CHHHHHHHhc
Confidence 35567777764 234566666655442 245778888999999999987777653 344442 3344444433
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 226 a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
--|+.++.-. |..++..+++.|++. .++|++|-
T Consensus 486 iPnl~V~~Pa--d~~e~~~~l~~A~~~---~~~Pv~ir 518 (663)
T 3kom_A 486 IPNLSVWRPA--DTIETMIAWKEAVKS---KDTPSVMV 518 (663)
T ss_dssp STTCEEECCC--SHHHHHHHHHHHHHC---SSCCEEEE
T ss_pred CCCcEEEeeC--CHHHHHHHHHHHHHh---CCCCEEEE
Confidence 3366666544 889999999998862 47999884
No 74
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=90.73 E-value=0.54 Score=45.01 Aligned_cols=102 Identities=16% Similarity=0.081 Sum_probs=63.5
Q ss_pred cchHHHHHHHHHhhhcCCCCeeEEE-eCccccCcchHHHHHH-HHHH--------cCCCEEEEEEcCCcccccccccccC
Q 016926 147 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALN-FSAV--------TEAPVIFICRNNGWAISTPISDQFR 216 (380)
Q Consensus 147 ~~lp~A~G~A~A~k~~~~~~~vv~~-~GDG~~~eG~~~Eal~-~A~~--------~~Lpvi~vv~NN~~~~~~~~~~~~~ 216 (380)
..+++|.|+|++ + -++++++ ++++.. ..++.+. .++. +++|+++++.+.+ +..+++.. +
T Consensus 63 ~~~~~a~G~A~~----G-~rp~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~th~--s 131 (338)
T 1qs0_B 63 GIVGTAVGMGAY----G-LRPVVEIQFADYFY---PASDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGGQTH--S 131 (338)
T ss_dssp HHHHHHHHHHHH----T-CEEEEECSCGGGCG---GGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCCSSS--S
T ss_pred HHHHHHHHHHhC----C-CEEEEEeccHhHHH---HHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCcccc--c
Confidence 346677777776 2 2344433 888863 3455543 3443 3599999987654 33333332 2
Q ss_pred CcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 016926 217 SDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 265 (380)
Q Consensus 217 ~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~ 265 (380)
..+++-...-.||.++.-. |+.+.+..++.|++. ++|++|-..
T Consensus 132 ~~d~~~l~~iP~l~V~~Ps--d~~e~~~~l~~A~~~----~~Pv~i~~p 174 (338)
T 1qs0_B 132 QSPEAMFTQVCGLRTVMPS--NPYDAKGLLIASIEC----DDPVIFLEP 174 (338)
T ss_dssp CCCHHHHTTSTTCEEECCC--SHHHHHHHHHHHHHS----SSCEEEEEE
T ss_pred ccHHHHHhcCCCCEEEeeC--CHHHHHHHHHHHHhc----CCcEEEEEc
Confidence 3344433333488888766 999999999999863 789998543
No 75
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=90.61 E-value=0.9 Score=47.84 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=65.3
Q ss_pred hHHHHHHHHHhhhcCCCC-eeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccc--ccccccccCCcCHHHHHh
Q 016926 149 LPHAVGAAYALKMDRKDA-CAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGR 225 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~-~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~--~~~~~~~~~~~~~~~~a~ 225 (380)
+++|.|+|+. +.-+ +++..+..-+. ..++++..++..++||+|++...+++. .+++. .+..+++-...
T Consensus 422 vg~a~GlA~~----Gg~~~P~~~~f~~F~~---~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tH--q~~edla~lr~ 492 (680)
T 1gpu_A 422 GAIMNGISAF----GANYKPYGGTFLNFVS---YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTH--QPIETLAHFRS 492 (680)
T ss_dssp HHHHHHHHHH----CTTCEEEEEEEHHHHG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHT
T ss_pred HHHHHHHHhc----CCCceEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCcc--CCHHHHHHhcC
Confidence 4567777654 3234 55565544332 245778889999999999997777653 34544 23344444333
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 226 a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
--|+.++.- .|+.++..+++.|++. .++|++|-
T Consensus 493 iP~l~V~~P--ad~~e~~~~l~~A~~~---~~~Pv~i~ 525 (680)
T 1gpu_A 493 LPNIQVWRP--ADGNEVSAAYKNSLES---KHTPSIIA 525 (680)
T ss_dssp SSSCEEECC--CSHHHHHHHHHHHHHC---SSCCEEEE
T ss_pred CCCCEEEec--CCHHHHHHHHHHHHHh---CCCcEEEE
Confidence 346666554 4899999999999863 37899984
No 76
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=90.16 E-value=0.87 Score=46.35 Aligned_cols=109 Identities=17% Similarity=0.064 Sum_probs=70.2
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccc---ccc---ccCCcCHHH
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTP---ISD---QFRSDGAVV 222 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~---~~~---~~~~~~~~~ 222 (380)
.-+|.|.|.+. + ..++++..|=|.++ ..-++..|...++|+|+|+-+........ ... .....+...
T Consensus 56 ~~~A~Gyar~t---g-~~v~~~tsGpG~~N---~~~gv~~A~~~~~Pll~itg~~p~~~~~~~~~~~~~~g~~~~q~~~~ 128 (552)
T 1ovm_A 56 SYAADGYARCK---G-FAALLTTFGVGELS---AMNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGEFRHFYH 128 (552)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCSHHHH
T ss_pred HHHHHHHHHhh---C-CcEEEEccCCcHHH---HHHHHHHHhhhcCCEEEEECCCCHHHHhcccccccccCCCcHHHHHH
Confidence 44677887764 3 34677778888765 34567788899999999997654322110 000 001123556
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 016926 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTY 267 (380)
Q Consensus 223 ~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~ 267 (380)
.++.+--....+. + ..+...+++|+..+..+.||+.|++...
T Consensus 129 ~~~~~tk~~~~v~--~-~~~~~~i~~A~~~a~~~~GPV~l~iP~d 170 (552)
T 1ovm_A 129 MSEPITVAQAVLT--E-QNACYEIDRVLTTMLRERRPGYLMLPAD 170 (552)
T ss_dssp HTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHTCCEEEEEEHH
T ss_pred HHHhheeEEEEEc--c-ccHHHHHHHHHHHHHhCCCCEEEEeehh
Confidence 7777777777776 4 5566666666666655569999998653
No 77
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=89.96 E-value=1.2 Score=46.45 Aligned_cols=101 Identities=12% Similarity=-0.022 Sum_probs=66.9
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccc--ccccccccCCcCHHHHHhh
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~--~~~~~~~~~~~~~~~~a~a 226 (380)
+++|.|+|+. +.-++++.++.+=+. ..++.+.+++..++||+|+....+++. .+++.. +..+++-...-
T Consensus 395 v~~a~GlA~~----gG~~P~~~~f~~F~~---~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~THq--~~ed~a~lr~i 465 (632)
T 3l84_A 395 AAINNAFARY----GIFLPFSATFFIFSE---YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQ--PIEQLSTFRAM 465 (632)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGS--CSSHHHHHHHS
T ss_pred HHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCCC--CHhHHHHHhcC
Confidence 4567777764 233556666554332 356778888999999999998777653 445442 33444444333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
-|+.++.-- |..++..+++.|++ .++|++|-.
T Consensus 466 P~l~V~~P~--d~~e~~~~l~~A~~----~~~Pv~ir~ 497 (632)
T 3l84_A 466 PNFLTFRPA--DGVENVKAWQIALN----ADIPSAFVL 497 (632)
T ss_dssp SSCEEECCS--SHHHHHHHHHHHHH----CSSCEEEEC
T ss_pred CCCEEEecC--CHHHHHHHHHHHHh----CCCCEEEEE
Confidence 477776644 88999999999986 479998853
No 78
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=89.49 E-value=1.7 Score=45.73 Aligned_cols=102 Identities=13% Similarity=0.020 Sum_probs=65.2
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCccc--ccccccccCCcCHHHHHhh
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAI--STPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~--~~~~~~~~~~~~~~~~a~a 226 (380)
+++|.|+|+. +.-++++.++..-+. -.++++..++..++|+++++...+++. .+++. .+..+++-...-
T Consensus 415 ~~~a~GlA~~----GG~~P~~~~~~~F~~---~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tH--q~~edla~lr~i 485 (673)
T 1r9j_A 415 CAILNGLDAH----DGIIPFGGTFLNFIG---YALGAVRLAAISHHRVIYVATHDSIGVGEDGPTH--QPVELVAALRAM 485 (673)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSHHHHHHHS
T ss_pred HHHHHHHHhc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEECCccCcCCCCccc--CCHHHHHHHcCC
Confidence 3466676654 323456666543332 345678889999999999987777653 34444 233444443333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
-|+.++.- .|..++..+++.|++. .++|++|-.
T Consensus 486 P~l~V~~P--ad~~e~~~~l~~a~~~---~~~Pv~i~~ 518 (673)
T 1r9j_A 486 PNLQVIRP--SDQTETSGAWAVALSS---IHTPTVLCL 518 (673)
T ss_dssp TTCEEECC--SSHHHHHHHHHHHHHC---TTCCEEEEC
T ss_pred CCCEEEeC--CCHHHHHHHHHHHHHh---CCCeEEEEE
Confidence 47666553 4899999999999863 378998853
No 79
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=88.73 E-value=1.9 Score=45.47 Aligned_cols=101 Identities=17% Similarity=0.103 Sum_probs=63.9
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcc--cccccccccCCcCHHHHHhh
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA--ISTPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~--~~~~~~~~~~~~~~~~~a~a 226 (380)
+++|.|+|+. +.-++++..+.-=+. ....++.+++..++||+|++...+++ ..+++.. +..+++-...-
T Consensus 440 v~~A~GlA~~----gG~~P~~~tf~~Fs~---f~~~air~~al~~lpVv~v~~~~gigvG~dG~THq--~ied~a~lr~i 510 (690)
T 3m49_A 440 GAAMNGIALH----GGLKTYGGTFFVFSD---YLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHE--PIEQLAALRAM 510 (690)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGC--CSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHHHhcCCCcEEEEECCCcCCCCCCCccC--CHHHHHHHhcC
Confidence 4567777764 223455544422221 12345778899999999999988764 3455543 33444443333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
-|+.++.-- |..++..+++.|++. .++|++|-
T Consensus 511 Pnl~V~~Pa--d~~E~~~~l~~Ai~~---~~~Pv~ir 542 (690)
T 3m49_A 511 PNVSVIRPA--DGNESVAAWRLALES---TNKPTALV 542 (690)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHC---SSSCEEEE
T ss_pred CCCEEEeeC--CHHHHHHHHHHHHHc---CCCCEEEE
Confidence 477766544 899999999999863 46899884
No 80
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=88.37 E-value=0.71 Score=48.09 Aligned_cols=102 Identities=17% Similarity=0.103 Sum_probs=65.3
Q ss_pred chHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcc-cccccccccCCcCHHHHHhh
Q 016926 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA-ISTPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~-~~~~~~~~~~~~~~~~~a~a 226 (380)
.+++|+|+|++ + -++++.++.+... =.+-..++.++..++||++++.+.++. -.+++... ..+++-...-
T Consensus 376 ~~~~a~G~A~~----G-~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~tH~~--~~d~a~~r~i 446 (629)
T 2o1x_A 376 AVTTAAGMALQ----G-MRPVVAIYSTFLQ--RAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHNG--VFDLSFLRSI 446 (629)
T ss_dssp HHHHHHHHHHT----T-CEEEEEEEHHHHG--GGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTTTCB--CSHHHHTTTS
T ss_pred HHHHHHHHHHc----C-CEEEEEecHHHHH--HHHHHHHHHHhhcCCCEEEEEECCccCCCCCcccCc--cHHHHHHHcc
Confidence 34566777664 2 4566777776542 223344677889999999999877652 22343322 2333333232
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
-|+.++.-. |+.+++..++.|++. ++|++|-.
T Consensus 447 P~l~v~~P~--d~~e~~~~~~~a~~~----~~Pv~i~~ 478 (629)
T 2o1x_A 447 PGVRIGLPK--DAAELRGMLKYAQTH----DGPFAIRY 478 (629)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHHS----SSCEEEEC
T ss_pred CCcEEEecC--CHHHHHHHHHHHHhC----CCCEEEEe
Confidence 477777655 999999999999974 68998854
No 81
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=88.25 E-value=1.4 Score=42.18 Aligned_cols=99 Identities=16% Similarity=0.037 Sum_probs=61.2
Q ss_pred chHHHHHHHHHhhhcCCCCeeEE-EeCccccCcchHHHHHHH-HH--------HcCCCEEEEEEcCCc-ccccccccccC
Q 016926 148 QLPHAVGAAYALKMDRKDACAVT-YFGDGGTSEGDFHAALNF-SA--------VTEAPVIFICRNNGW-AISTPISDQFR 216 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~-~~GDG~~~eG~~~Eal~~-A~--------~~~Lpvi~vv~NN~~-~~~~~~~~~~~ 216 (380)
.+++|.|+|++ + -++++. .+++... ..++.+.. ++ ..++||++++.+ ++ +-.+++..+ +
T Consensus 74 ~v~~a~G~A~~----G-~rp~~~~~f~~F~~---~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G~tHs~-~ 143 (341)
T 2ozl_B 74 FAGIAVGAAMA----G-LRPICEFMTFNFSM---QAIDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVAAQHSQ-C 143 (341)
T ss_dssp HHHHHHHHHHT----T-CEEEEECSSGGGGG---GGHHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCCGGGCC-C
T ss_pred HHHHHHHHHHC----C-CEEEEEeccHHHHH---HHHHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCCcchhh-H
Confidence 35667777764 2 344444 3888873 24455554 33 278999999986 43 223344422 1
Q ss_pred CcCHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 016926 217 SDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEAL 265 (380)
Q Consensus 217 ~~~~~~~a~a~-G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~ 265 (380)
. + ...... ||.++.-. |+.+.+..++.|++. ++|++|-..
T Consensus 144 ~-e--a~l~~iP~l~V~~Ps--d~~e~~~~l~~a~~~----~~Pv~i~~~ 184 (341)
T 2ozl_B 144 F-A--AWYGHCPGLKVVSPW--NSEDAKGLIKSAIRD----NNPVVVLEN 184 (341)
T ss_dssp C-H--HHHHTSTTCEEECCC--SHHHHHHHHHHHHHS----SSCEEEEEC
T ss_pred H-H--HHhccCCCCEEEEeC--CHHHHHHHHHHHHhc----CCCEEEEEC
Confidence 1 2 233333 77777655 999999999998863 689988653
No 82
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=85.87 E-value=1.5 Score=41.69 Aligned_cols=100 Identities=12% Similarity=0.001 Sum_probs=59.8
Q ss_pred cchHHHHHHHHHhhhcCCCCeeEEE-eCccccCcchHHHHHHH-HHH--------cCCCEEEEEEcCCcccccccccccC
Q 016926 147 TQLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNF-SAV--------TEAPVIFICRNNGWAISTPISDQFR 216 (380)
Q Consensus 147 ~~lp~A~G~A~A~k~~~~~~~vv~~-~GDG~~~eG~~~Eal~~-A~~--------~~Lpvi~vv~NN~~~~~~~~~~~~~ 216 (380)
..+++|.|+|++ + -++++++ ++++.. ..++.+.. ++. .++|+|+++. .++....... ++
T Consensus 61 ~~v~~a~G~A~~----G-~rp~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g~~--hs 129 (324)
T 1w85_B 61 GIGGLAIGLALQ----G-FRPVPEIQFFGFVY---EVMDSICGQMARIRYRTGGRYHMPITIRSP-FGGGVHTPEL--HS 129 (324)
T ss_dssp HHHHHHHHHHHT----T-CEEEEBCSSGGGGG---GTHHHHHTTGGGHHHHTTTSSCCCCEEEEE-ECSSSCCCTT--SS
T ss_pred HHHHHHHHHHhC----C-CEEEEEecchhHHH---HHHHHHHHHHHHHhhhccCCCcCCEEEEEe-ccCCCCCCCc--cc
Confidence 345667777764 2 2344433 888763 24555542 443 6899999987 3443322222 22
Q ss_pred CcCHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 217 SDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 217 ~~~~~~~a~a~-G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
..+. ...++. ||.++.-. |+.+.+..++.|++ .++|++|-.
T Consensus 130 ~~~~-a~~~~iP~l~V~~Ps--d~~e~~~~l~~a~~----~~~Pv~i~~ 171 (324)
T 1w85_B 130 DSLE-GLVAQQPGLKVVIPS--TPYDAKGLLISAIR----DNDPVIFLE 171 (324)
T ss_dssp CCCH-HHHTTSTTCEEECCS--SHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred ccHH-HHHccCCCCEEEeeC--CHHHHHHHHHHHHH----cCCCEEEEe
Confidence 2334 334443 66666544 99999999999985 478998853
No 83
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=84.89 E-value=3.6 Score=43.45 Aligned_cols=100 Identities=15% Similarity=0.061 Sum_probs=64.4
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcc--cccccccccCCcCHHHHHhh
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA--ISTPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~--~~~~~~~~~~~~~~~~~a~a 226 (380)
+++|.|+|+. +.-++++.++. .|.+ .....+.+++..++||+|+....+++ ..+++.. +..+++-...-
T Consensus 461 v~~AaGlA~~----~G~~Pv~~~f~--~F~~-~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~THq--~~ed~a~lr~i 531 (711)
T 3uk1_A 461 SAAINGLVLH----GGYKPFGGTFL--TFSD-YSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTHQ--SVEHVASLRLI 531 (711)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEG--GGHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTC--CSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEEhH--HHHH-HHHHHHHHhhhcCCCEEEEEECCCcCcCCCCCccC--ChhHHHHHhcC
Confidence 5567777763 12345555543 3332 24567778889999999999877764 3445442 33444433333
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
-|+.++.-- |..++..+++.|++ .++|++|-
T Consensus 532 Pnl~V~~Pa--d~~E~~~~l~~Ai~----~~~Pv~ir 562 (711)
T 3uk1_A 532 PNLDVWRPA--DTVETAVAWTYAVA----HQHPSCLI 562 (711)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHH----SSSCEEEE
T ss_pred CCCEEEecC--CHHHHHHHHHHHHh----cCCCEEEE
Confidence 377666544 88999999999986 47999884
No 84
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=84.72 E-value=1.7 Score=44.37 Aligned_cols=107 Identities=14% Similarity=0.026 Sum_probs=66.9
Q ss_pred HHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCc
Q 016926 150 PHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV 229 (380)
Q Consensus 150 p~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~ 229 (380)
-+|.|.|.+. +.-.+++|..|=|+++ ..-++..|..-++|||+|.-+-..........+ ..|....++.+--
T Consensus 60 ~~AdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~~~~~~g~~~~Q--~~d~~~~~~~~tk 131 (556)
T 3hww_A 60 HLALGLAKVS---KQPVAVIVTSGTAVAN---LYPALIEAGLTGEKLILLTADRPPELIDCGANQ--AIRQPGMFASHPT 131 (556)
T ss_dssp HHHHHHHHHH---CSCEEEEECSSHHHHT---THHHHHHHHHHCCCEEEEEEECCGGGSSSSCTT--CCCCTTTTTTCSS
T ss_pred HHHHHHHHhh---CCCEEEEECCCcHHHh---hhHHHHHHHHhCCCeEEEeCCCCHHHhccCCCc--cccHHHHHhhhee
Confidence 4566776553 4556777788999887 446688888999999999976543322111111 1244455555544
Q ss_pred eEEEEe-CC---CHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 016926 230 RSIRVD-GN---DALAIYSAVHAAREMAIGEGRPILIEALT 266 (380)
Q Consensus 230 ~~~~Vd-G~---D~~av~~a~~~a~~~ar~~~gP~lIe~~t 266 (380)
....+. .. ....+.+++++|+.. ...||+.|++-.
T Consensus 132 ~~~~v~~~~~~~~~~~i~~~i~~A~~~--~r~GPV~i~iP~ 170 (556)
T 3hww_A 132 HSISLPRPTQDIPARWLVSTIDHALGT--LHAGGVHINCPF 170 (556)
T ss_dssp EEEECCCCCTTSCHHHHHHHHHHHHHS--CCSSCEEEEEEC
T ss_pred EEEecCCCcccccHHHHHHHHHHHHhc--CCCCCEEEeCCc
Confidence 455554 21 134578888888832 235899999874
No 85
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=84.55 E-value=4.1 Score=42.97 Aligned_cols=101 Identities=12% Similarity=0.053 Sum_probs=63.1
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcc--cccccccccCCcCHHHHHhh
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA--ISTPISDQFRSDGAVVKGRA 226 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~--~~~~~~~~~~~~~~~~~a~a 226 (380)
+++|.|+|+. +.-++++..+.. |.. ....++.+++..++||+|+....+++ .+++++ .+..+++-...-
T Consensus 445 v~~A~GlA~~----gG~~Pv~~tF~~--F~d-~~~~~ir~~al~~lpvv~v~thdg~gvG~dG~TH--q~ied~a~lr~i 515 (700)
T 3rim_A 445 GAILSGIVLH----GPTRAYGGTFLQ--FSD-YMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTH--QPIEHLSALRAI 515 (700)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGG--GGG-GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--SCSSHHHHHHTS
T ss_pred HHHHHHHHHc----CCCEEEEEecHH--HHH-HHHHHHHHhcCCCCCEEEEEeCCCcccCCCCCcc--CChhHHHHHhcC
Confidence 4566777765 223444443322 111 12345778899999999999877764 345544 234455544444
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccC--CcEEEE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEG--RPILIE 263 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~--gP~lIe 263 (380)
-|+.++.-- |..++..+++.|++. .+ +|++|-
T Consensus 516 Pnl~V~~Pa--d~~e~~~~l~~Ai~~---~~~~~Pv~ir 549 (700)
T 3rim_A 516 PRLSVVRPA--DANETAYAWRTILAR---RNGSGPVGLI 549 (700)
T ss_dssp TTCEEECCS--SHHHHHHHHHHHHTT---TTCSSCEEEE
T ss_pred CCCEEEeCC--CHHHHHHHHHHHHHc---cCCCCCEEEE
Confidence 477766644 889999999999864 44 799985
No 86
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=84.13 E-value=3.5 Score=39.95 Aligned_cols=99 Identities=15% Similarity=-0.029 Sum_probs=55.4
Q ss_pred chHHHHHHHHHhhhcCCCCeeEEE-eCccccCcchHHHHHHH-HHHc--------CCCEEEEEEcCCcccccccccccCC
Q 016926 148 QLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNF-SAVT--------EAPVIFICRNNGWAISTPISDQFRS 217 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~~-~GDG~~~eG~~~Eal~~-A~~~--------~Lpvi~vv~NN~~~~~~~~~~~~~~ 217 (380)
.+++|.|+|++ + -++++.+ ++|... ..++.+.. ++.. ++||++++.+.+..-..++.. .
T Consensus 110 ~v~~a~G~A~~----G-~rpv~~~tf~~Fl~---~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~hs---~ 178 (369)
T 1ik6_A 110 ILGFAMGMAMA----G-LKPVAEIQFVDFIW---LGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHS---N 178 (369)
T ss_dssp HHHHHHHHHHT----T-CEEEEECCCC-------CCHHHHHHHHHHHHC------CCCCEEEEEECC-------------
T ss_pred HHHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCcccc---c
Confidence 35567777664 2 3444544 888763 23444433 4543 999999998766332222221 1
Q ss_pred cCHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 218 DGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 218 ~~~~~~a~a~-G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
.+ ....++. ||.++.-. |+.+.+..++.|++ .++|++|-.
T Consensus 179 ~~-~a~l~~iPnl~V~~Ps--d~~e~~~ll~~A~~----~~~Pv~i~~ 219 (369)
T 1ik6_A 179 SP-EAIFVHTPGLVVVMPS--TPYNAKGLLKAAIR----GDDPVVFLE 219 (369)
T ss_dssp -H-HHHHHTCTTCEEECCC--SHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred cH-HHHHcCCCCcEEEecC--CHHHHHHHHHHHHh----CCCCEEEEE
Confidence 22 2334443 77777655 99999999999886 478998853
No 87
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=83.54 E-value=6.4 Score=37.13 Aligned_cols=98 Identities=15% Similarity=0.079 Sum_probs=60.5
Q ss_pred chHHHHHHHHHhhhcCCCCeeEEE-eCccccCcchHHHHHHH-HHH--------cCCCEEEEEEcCCcccccccccccCC
Q 016926 148 QLPHAVGAAYALKMDRKDACAVTY-FGDGGTSEGDFHAALNF-SAV--------TEAPVIFICRNNGWAISTPISDQFRS 217 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~~-~GDG~~~eG~~~Eal~~-A~~--------~~Lpvi~vv~NN~~~~~~~~~~~~~~ 217 (380)
.+++|.|+|++ + -++++++ +++... ..++.+.. ++. .++|+|+++.. ++........+ .
T Consensus 63 ~v~~a~G~A~~----G-~~p~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~-g~~~~~g~~hs--~ 131 (324)
T 1umd_B 63 IVGAALGMAAH----G-LRPVAEIQFADYIF---PGFDQLVSQVAKLRYRSGGQFTAPLVVRMPS-GGGVRGGHHHS--Q 131 (324)
T ss_dssp HHHHHHHHHHH----T-CEEEEECSSGGGCG---GGHHHHHHTTTTHHHHTTTSSCCCCEEEEEE-CSSSSCGGGSS--C
T ss_pred HHHHHHHHHHC----C-CEEEEEeccHhHHH---HHHHHHHHHHHHHHhhcCCCCcCCEEEEEcC-CCCCCCCCccc--h
Confidence 35667777765 2 2444443 888762 34555533 343 68899998873 44333222222 2
Q ss_pred cCHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 218 DGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 218 ~~~~~~a~a~-G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
.+. ...+.+ |+.++.-. |+.+.+..++.|++ .++|++|-
T Consensus 132 ~~~-a~~~~iP~~~V~~P~--d~~e~~~~l~~a~~----~~~Pv~i~ 171 (324)
T 1umd_B 132 SPE-AHFVHTAGLKVVAVS--TPYDAKGLLKAAIR----DEDPVVFL 171 (324)
T ss_dssp CCH-HHHHTSTTCEEEECC--SHHHHHHHHHHHHH----CSSCEEEE
T ss_pred hHH-HHHhcCCCCEEEEeC--CHHHHHHHHHHHHh----cCCCEEEE
Confidence 344 444444 77777655 99999999999985 47899884
No 88
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=80.65 E-value=4.3 Score=38.78 Aligned_cols=99 Identities=8% Similarity=-0.004 Sum_probs=60.9
Q ss_pred chHHHHHHHHHhhhcCCCCeeEE-EeCccccCcchHHHHHH-HHHHc--------CC-CEEEEEEcCCcccccccccccC
Q 016926 148 QLPHAVGAAYALKMDRKDACAVT-YFGDGGTSEGDFHAALN-FSAVT--------EA-PVIFICRNNGWAISTPISDQFR 216 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~-~~GDG~~~eG~~~Eal~-~A~~~--------~L-pvi~vv~NN~~~~~~~~~~~~~ 216 (380)
.+++|.|+|++ + -++++. .++++.. ..++.+. .++.+ ++ ||++++..-+. ..+++.. +
T Consensus 79 ~v~~a~G~A~~----G-~rp~~~~tf~~F~~---~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~-~~G~th~--~ 147 (342)
T 2bfd_B 79 IVGFGIGIAVT----G-ATAIAEIQFADYIF---PAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCV-GHGALYH--S 147 (342)
T ss_dssp HHHHHHHHHHT----T-CCEEEECSSGGGCG---GGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCC-SSCGGGS--S
T ss_pred HHHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCC-CCCcchh--h
Confidence 35667777765 2 344443 4888854 3445553 44433 44 99999876442 3344332 2
Q ss_pred CcCHHHHHhhc-CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 217 SDGAVVKGRAY-GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 217 ~~~~~~~a~a~-G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
..+++-. ++. ||.++.-. |+.+.+..++.|+++ ++|++|-.
T Consensus 148 ~~d~~~l-~~iP~l~V~~Ps--d~~e~~~~l~~a~~~----~~Pv~i~~ 189 (342)
T 2bfd_B 148 QSPEAFF-AHCPGIKVVIPR--SPFQAKGLLLSCIED----KNPCIFFE 189 (342)
T ss_dssp CCCHHHH-HTSTTCEEECCS--SHHHHHHHHHHHHHS----SSCEEEEE
T ss_pred HhHHHHH-hcCCCcEEEeeC--CHHHHHHHHHHHHhc----CCcEEEEe
Confidence 3445433 344 77777655 999999999999863 78999844
No 89
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=78.80 E-value=5.8 Score=44.59 Aligned_cols=109 Identities=17% Similarity=0.085 Sum_probs=70.0
Q ss_pred hHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcc---cccccccccCCcCHHHHHh
Q 016926 149 LPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWA---ISTPISDQFRSDGAVVKGR 225 (380)
Q Consensus 149 lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~---~~~~~~~~~~~~~~~~~a~ 225 (380)
+++++|++++ +.++++.+--.+++ ...|.|..++-..+|+|+++.+.... ++...+ ..++. .++
T Consensus 67 ~~aaiGAa~a------GaR~~t~Ts~~Gl~--lm~e~l~~~ag~~~P~Vi~va~R~g~~~glsi~~~----hsd~~-~ar 133 (1231)
T 2c42_A 67 AGAVHGALAA------GALTTTFTASQGLL--LMIPNMYKISGELLPGVFHVTARAIAAHALSIFGD----HQDIY-AAR 133 (1231)
T ss_dssp HHHHHHHHHT------TCCEEEEECHHHHH--HHHHHHHHHHHTTCCCEEEEEECCCCSSSBCCSCC----SHHHH-TTT
T ss_pred HHHHHHHHHc------CChHhhhccHHHHH--HHHHHHHHHhCCCCCEEEEECCCCccCCCCcCCCc----hhhHH-HHh
Confidence 5677887765 34455554433443 35577765555678988888876643 111111 11111 255
Q ss_pred hcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCC
Q 016926 226 AYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHT 273 (380)
Q Consensus 226 a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs 273 (380)
..||+++.-. ++.+.++-+..|...+.+..-|+++-..++|. +|.
T Consensus 134 ~~G~~vl~ps--s~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~-sh~ 178 (1231)
T 2c42_A 134 QTGFAMLASS--SVQEAHDMALVAHLAAIESNVPFMHFFDGFRT-SHE 178 (1231)
T ss_dssp TSSCEEEECC--SHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT-TTC
T ss_pred cCCcEEEECC--CHHHHHHHHHHHHHHHHHcCCCEEEEecCccc-ccc
Confidence 5687666544 99999999999988777788999998888765 454
No 90
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=72.96 E-value=15 Score=31.47 Aligned_cols=71 Identities=17% Similarity=0.085 Sum_probs=44.4
Q ss_pred CCeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccc------------c---ccCCcCHHHHHhhcCc
Q 016926 165 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS------------D---QFRSDGAVVKGRAYGV 229 (380)
Q Consensus 165 ~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~------------~---~~~~~~~~~~a~a~G~ 229 (380)
...+|+++.||..+.+...+.+..+...+++|..|-.-+.-+...+.. . ......+..+|..-|.
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG 190 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKG 190 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEE
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcCC
Confidence 457999999999987767777777777777766655433211100000 0 1112235677888888
Q ss_pred eEEEEe
Q 016926 230 RSIRVD 235 (380)
Q Consensus 230 ~~~~Vd 235 (380)
..+.++
T Consensus 191 ~~~~~~ 196 (218)
T 3ibs_A 191 IYVRVD 196 (218)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 888877
No 91
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=66.93 E-value=11 Score=41.08 Aligned_cols=102 Identities=14% Similarity=0.150 Sum_probs=56.8
Q ss_pred chHHHHHHHHHhhhcCCCCeeEE--EeCccccCcc--hHHHHH-HHH-HHc--CCCEEEEEEcCCcccccccccccCCcC
Q 016926 148 QLPHAVGAAYALKMDRKDACAVT--YFGDGGTSEG--DFHAAL-NFS-AVT--EAPVIFICRNNGWAISTPISDQFRSDG 219 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~--~~GDG~~~eG--~~~Eal-~~A-~~~--~Lpvi~vv~NN~~~~~~~~~~~~~~~~ 219 (380)
.++.|.|+|++ +....+|+ .+|| |..| ..+.-+ +.+ +.| ++||++++.. +|...++...+. .
T Consensus 664 ~vg~a~G~A~~----G~~~lpv~e~qf~d--F~~~AQra~DQii~~~~ak~~~~~~vv~~l~~-G~~g~G~~Hss~---~ 733 (933)
T 2jgd_A 664 VLAFEYGYATA----EPRTLTIWEAQFGD--FANGAQVVIDQFISSGEQKWGRMCGLVMLLPH-GYEGQGPEHSSA---R 733 (933)
T ss_dssp HHHHHHHHHHH----CTTSEEEEEC-CGG--GGGGGHHHHHHTTTTHHHHHCCCCCCEEEEEC-CCSSSCTTSSCC---C
T ss_pred HHHHHHHHHhc----CCCCCCEEEEEEhh--hhcccHHHHHHHHHHHHHHHccCCCEEEEEeC-CCCCCCcccccc---h
Confidence 34556666654 45444443 4654 4333 223323 334 344 7899999986 554334443322 2
Q ss_pred HHHHHhhc---CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 220 AVVKGRAY---GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 220 ~~~~a~a~---G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
+.+.+... ||.++... |+.+....++.++. +..++|++|-
T Consensus 734 ~E~~l~~~~~pnm~V~~Ps--t~~e~~~lLr~a~~--~~~~~Pvii~ 776 (933)
T 2jgd_A 734 LERYLQLCAEQNMQVCVPS--TPAQVYHMLRRQAL--RGMRRPLVVM 776 (933)
T ss_dssp HHHHHHTCCTTCCEEECCC--SHHHHHHHHHHHHH--SSCCCCEEEE
T ss_pred HHHHHHHhCCCCeEEEecC--CHHHHHHHHHHHHH--hcCCCcEEEE
Confidence 33444434 56555544 99999999988742 2347899883
No 92
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=66.37 E-value=13 Score=40.12 Aligned_cols=107 Identities=10% Similarity=0.040 Sum_probs=59.7
Q ss_pred chHHHHHHHHHhhhcCCCCeeEEEeCccccCcch---HHHHHHHHH-Hc--CCCEEEEEEcCCcccccccccccCCcCHH
Q 016926 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSA-VT--EAPVIFICRNNGWAISTPISDQFRSDGAV 221 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~---~~Eal~~A~-~~--~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~ 221 (380)
.++.|+|+|++ +++.+++.-+-=|.|..+. +-+-++.+. .| ++||++++..-+.+ .+++..+....++.
T Consensus 596 ~vG~a~G~A~~----G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G-~Gp~Hs~~~~E~~l 670 (868)
T 2yic_A 596 AVGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTSGRIERFL 670 (868)
T ss_dssp HHHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSCCCHHHHH
T ss_pred HHHHHHHHHcc----CCCCceEEEEehHHHHhhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCC-CChhhcCCcHHHHH
Confidence 35566666655 5555555544445554443 323222221 23 67999999865533 44443332233343
Q ss_pred HHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 222 VKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 222 ~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
....--||.++... |+.+.+..++.++.. ..++|++|-
T Consensus 671 ~l~~~pnm~V~~Ps--~p~~~~~lLr~a~~~--~~~~Pvii~ 708 (868)
T 2yic_A 671 QLWAEGSMTIAMPS--TPANYFHLLRRHGKD--GIQRPLIVF 708 (868)
T ss_dssp HHCCTTSCEEECCC--SHHHHHHHHHHHHHS--SCCCCEEEE
T ss_pred hcCCCCCCEEEEeC--CHHHHHHHHHHHHhc--CCCCcEEEE
Confidence 33333366666554 999999999987752 235898773
No 93
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=64.68 E-value=14 Score=41.10 Aligned_cols=107 Identities=10% Similarity=0.040 Sum_probs=60.2
Q ss_pred chHHHHHHHHHhhhcCCCCeeEEEeCccccCcch---HHHHHHHHH-Hc--CCCEEEEEEcCCcccccccccccCCcCHH
Q 016926 148 QLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGD---FHAALNFSA-VT--EAPVIFICRNNGWAISTPISDQFRSDGAV 221 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~---~~Eal~~A~-~~--~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~ 221 (380)
.++.|.|+|++ +++.+++.-+-=|.|..+. +-+-++-+. .| ++||++++...+.+ .+++..+....++.
T Consensus 841 ~vg~a~G~A~~----G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G-~G~~Hs~~~~E~~l 915 (1113)
T 2xt6_A 841 AVGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTSGRIERFL 915 (1113)
T ss_dssp HHHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSCCCHHHHH
T ss_pred HHHHHHHHHhc----CCCCceEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCC-CChhhhcccHHHHH
Confidence 45556666654 5555555544445554444 333223331 23 67999999865533 44444332233333
Q ss_pred HHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEE
Q 016926 222 VKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIE 263 (380)
Q Consensus 222 ~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe 263 (380)
....--||.++... |+.+.+..++.++.+ ..++|++|-
T Consensus 916 ~l~~~pnm~V~~Ps--~~~~~~~lLr~a~~~--~~~~Pvii~ 953 (1113)
T 2xt6_A 916 QLWAEGSMTIAMPS--TPANYFHLLRRHGKD--GIQRPLIVF 953 (1113)
T ss_dssp HHCCTTSCEEECCS--SHHHHHHHHHHHHHS--SCCCCEEEE
T ss_pred hcCCCCCcEEEecC--CHHHHHHHHHHHHhc--cCCCCEEEE
Confidence 33333366666554 999999999988752 235899873
No 94
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=56.81 E-value=40 Score=27.14 Aligned_cols=34 Identities=24% Similarity=0.209 Sum_probs=29.1
Q ss_pred cCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 016926 227 YGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 260 (380)
Q Consensus 227 ~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~ 260 (380)
.|.-.++..|.|.+++..++++.+..+|+.-|.+
T Consensus 82 sgvm~i~f~gddlea~ekalkemirqarkfagtv 115 (170)
T 4hhu_A 82 SGVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 115 (170)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 4666778889999999999999999999987754
No 95
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=54.18 E-value=18 Score=30.64 Aligned_cols=37 Identities=5% Similarity=0.082 Sum_probs=30.9
Q ss_pred HHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q 016926 287 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHA 329 (380)
Q Consensus 287 ~~~~~~~~DPi~~~~~~L~~~g~~t~~e~~~i~~~~~~~v~~a 329 (380)
+++| +.-+.+.|+++|++|.+|+++-.++++++....
T Consensus 109 Ye~W------L~ALe~lLvekGvit~~EL~ar~aEv~ar~~~~ 145 (157)
T 2zzd_B 109 YGRW------LLTAARILVDKQFVTLTELHNKIVEMRERVASG 145 (157)
T ss_dssp HHHH------HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHH------HHHHHHHHHHcCCCCHHHHHHHHHHHHHhhhcc
Confidence 5667 346899999999999999999999998886653
No 96
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=45.21 E-value=24 Score=25.70 Aligned_cols=24 Identities=17% Similarity=0.331 Sum_probs=19.0
Q ss_pred CChHHHHHHHHHHcCCCCHHHHHHH
Q 016926 294 QDPVTRFRKWIESNGWWNGDIESEL 318 (380)
Q Consensus 294 ~DPi~~~~~~L~~~g~~t~~e~~~i 318 (380)
.-|+..=.++|..+| +|++|+++.
T Consensus 32 ~sp~~~K~~FL~sKG-Lt~eEI~~A 55 (70)
T 2w84_A 32 QSPLATRRAFLKKKG-LTDEEIDMA 55 (70)
T ss_dssp GSCHHHHHHHHHHTT-CCHHHHHHH
T ss_pred hCCHHHHHHHHHHcC-CCHHHHHHH
Confidence 468888899999999 688776543
No 97
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=43.11 E-value=27 Score=24.11 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=20.8
Q ss_pred CChHHHHHHHHHHcCCCCHHHHHHHHH
Q 016926 294 QDPVTRFRKWIESNGWWNGDIESELRS 320 (380)
Q Consensus 294 ~DPi~~~~~~L~~~g~~t~~e~~~i~~ 320 (380)
.-|+..=.++|..+| +|++|+++.-+
T Consensus 27 ~sp~~~K~~FL~sKG-Lt~~EI~~Al~ 52 (54)
T 3ff5_A 27 QSPLATRRAFLKKKG-LTDEEIDLAFQ 52 (54)
T ss_dssp GSCHHHHHHHHHHTT-CCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcC-CCHHHHHHHHH
Confidence 568888899999999 69998876543
No 98
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=40.09 E-value=81 Score=28.92 Aligned_cols=72 Identities=14% Similarity=0.123 Sum_probs=44.3
Q ss_pred EEEeCcccc--CcchHHHHHHHHHHcCCCEEEEEEcCCccccccc-c--cccCCc---CHHHHHhhcCceEEEEeCCCHH
Q 016926 169 VTYFGDGGT--SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPI-S--DQFRSD---GAVVKGRAYGVRSIRVDGNDAL 240 (380)
Q Consensus 169 v~~~GDG~~--~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~-~--~~~~~~---~~~~~a~a~G~~~~~VdG~D~~ 240 (380)
|+|--||+. +.|.+.-+|.+|..++ .+.|+|.+..-.+.... . ...... ++.+..+..+...+-+|.-+..
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~~~~~~~~~g~~v~~l~~~d~~~~~~~l~~~~~d~lIvD~Y~~~ 81 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPLEGSLIDEIPYPVYELSSESIYELINLIKEEKFELLIIDHYGIS 81 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCCTTCCGGGCCSCEEECSSSCHHHHHHHHHHHTCSEEEEECTTCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecCcHhHHHHCCCeEEEcCccCHHHHHHHHHhCCCCEEEEECCCCC
Confidence 566778876 6888999999999988 99999865421111000 0 001111 2334455567788888876654
Q ss_pred H
Q 016926 241 A 241 (380)
Q Consensus 241 a 241 (380)
.
T Consensus 82 ~ 82 (282)
T 3hbm_A 82 V 82 (282)
T ss_dssp H
T ss_pred H
Confidence 4
No 99
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=34.45 E-value=57 Score=26.22 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=28.6
Q ss_pred CceEEEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 016926 228 GVRSIRVDGNDALAIYSAVHAAREMAIGEGRPI 260 (380)
Q Consensus 228 G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~ 260 (380)
|.-.++..|.|.+++..++++.+..+|+.-|.+
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagtv 34 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 34 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 556778889999999999999999999987754
No 100
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=34.04 E-value=74 Score=21.04 Aligned_cols=18 Identities=11% Similarity=0.296 Sum_probs=7.6
Q ss_pred hhHHHHHhcCChHHHHHHHH
Q 016926 285 DEIEWWRTTQDPVTRFRKWI 304 (380)
Q Consensus 285 ~e~~~~~~~~DPi~~~~~~L 304 (380)
.+++.|+ .+-+.-+|+.|
T Consensus 7 ~dle~~K--qEIL~E~RkEl 24 (45)
T 1use_A 7 SDLQRVK--QELLEEVKKEL 24 (45)
T ss_dssp HHHHHHH--HHHHHHHHHHH
T ss_pred HHHHHHH--HHHHHHHHHHH
Confidence 3455553 23444444433
No 101
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=32.97 E-value=99 Score=26.12 Aligned_cols=71 Identities=10% Similarity=0.024 Sum_probs=45.2
Q ss_pred EEEEEEcCCcccccccc-c-c--cCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEEEe
Q 016926 196 VIFICRNNGWAISTPIS-D-Q--FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALT 266 (380)
Q Consensus 196 vi~vv~NN~~~~~~~~~-~-~--~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~~t 266 (380)
+.+|++|..+.-.+... + . .....+.+.++.+|+.+....--+..++.+.+++..++-......++|.+..
T Consensus 35 ~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~dh~~~dc~vv~il 109 (167)
T 1pyo_A 35 LALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEMQEKLQNFAQLPAHRVTDSCIVALL 109 (167)
T ss_dssp EEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHTCGGGGTSSEEEEEEE
T ss_pred EEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHhhhhhhccCCCEEEEEeC
Confidence 66777666664322111 1 1 1123567889999999998888888999999988765222235567765544
No 102
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=31.52 E-value=1.1e+02 Score=26.73 Aligned_cols=82 Identities=22% Similarity=0.240 Sum_probs=46.6
Q ss_pred CCeeEEEeCccccCcchHHHHHHHHHHc-CCC--EEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCC---C
Q 016926 165 DACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---D 238 (380)
Q Consensus 165 ~~~vv~~~GDG~~~eG~~~Eal~~A~~~-~Lp--vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---D 238 (380)
.+++|.+.|.|+.. +++--+... ++| |+.|+.|+.-+ .-.++|+.+|+|++.++-. +
T Consensus 8 ~ri~vl~SG~gsnl-----~all~~~~~~~l~~~I~~Visn~~~a------------~~l~~A~~~gIp~~~~~~~~~~~ 70 (209)
T 4ds3_A 8 NRVVIFISGGGSNM-----EALIRAAQAPGFPAEIVAVFSDKAEA------------GGLAKAEAAGIATQVFKRKDFAS 70 (209)
T ss_dssp EEEEEEESSCCHHH-----HHHHHHHTSTTCSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCGGGSSS
T ss_pred ccEEEEEECCcHHH-----HHHHHHHHcCCCCcEEEEEEECCccc------------HHHHHHHHcCCCEEEeCccccCC
Confidence 46788888887764 444444443 354 77777765211 1237899999999988632 2
Q ss_pred HHHHHHHHHHHHHHhhccCCcEEEEEEee
Q 016926 239 ALAIYSAVHAAREMAIGEGRPILIEALTY 267 (380)
Q Consensus 239 ~~av~~a~~~a~~~ar~~~gP~lIe~~t~ 267 (380)
-.+..+.+.+.++ + .+|=+|.+.-|
T Consensus 71 r~~~d~~~~~~l~---~-~~~Dliv~agy 95 (209)
T 4ds3_A 71 KEAHEDAILAALD---V-LKPDIICLAGY 95 (209)
T ss_dssp HHHHHHHHHHHHH---H-HCCSEEEESSC
T ss_pred HHHHHHHHHHHHH---h-cCCCEEEEecc
Confidence 3333334434333 2 24555554443
No 103
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=31.41 E-value=65 Score=28.49 Aligned_cols=57 Identities=23% Similarity=0.288 Sum_probs=36.0
Q ss_pred CCCeeEEEeCccccCcchHHHHHHHHHHc-CCC--EEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCC
Q 016926 164 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN 237 (380)
Q Consensus 164 ~~~~vv~~~GDG~~~eG~~~Eal~~A~~~-~Lp--vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~ 237 (380)
+.+++|.+.|.|+.. +++--+... ++| |+.|+.|+.-+ .-.++|+.+|+|++.++-.
T Consensus 8 ~~ri~vl~SG~gsnl-----~all~~~~~~~~~~~I~~Vis~~~~a------------~~l~~A~~~gIp~~~~~~~ 67 (215)
T 3kcq_A 8 ELRVGVLISGRGSNL-----EALAKAFSTEESSVVISCVISNNAEA------------RGLLIAQSYGIPTFVVKRK 67 (215)
T ss_dssp CEEEEEEESSCCHHH-----HHHHHHTCCC-CSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCBT
T ss_pred CCEEEEEEECCcHHH-----HHHHHHHHcCCCCcEEEEEEeCCcch------------HHHHHHHHcCCCEEEeCcc
Confidence 346788889988764 334444433 344 77788765211 1247899999999988643
No 104
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=31.06 E-value=64 Score=23.02 Aligned_cols=29 Identities=24% Similarity=0.204 Sum_probs=24.8
Q ss_pred EEEeCCCHHHHHHHHHHHHHHhhccCCcE
Q 016926 232 IRVDGNDALAIYSAVHAAREMAIGEGRPI 260 (380)
Q Consensus 232 ~~VdG~D~~av~~a~~~a~~~ar~~~gP~ 260 (380)
++..|.|.+++..++++.+..+|+..|.+
T Consensus 5 irfrgddleafekalkemirqarkfagtv 33 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGTV 33 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCEE
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcceE
Confidence 45678899999999999999999887754
No 105
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=29.97 E-value=2.1e+02 Score=23.32 Aligned_cols=59 Identities=15% Similarity=0.131 Sum_probs=35.6
Q ss_pred cCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeC-CCHHHHHHHHHHHHHHhh
Q 016926 192 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG-NDALAIYSAVHAAREMAI 254 (380)
Q Consensus 192 ~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG-~D~~av~~a~~~a~~~ar 254 (380)
.+.|+|+|.+--.. ............+.++.+|++.+.+.. .+-..+.+.+....+.++
T Consensus 126 ~~~piilv~nK~Dl----~~~~~v~~~~~~~~~~~~~~~~~e~Sa~~~g~gv~~lf~~l~~~i~ 185 (187)
T 3c5c_A 126 RSIPALLLGNKLDM----AQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREAR 185 (187)
T ss_dssp CCCCEEEEEECGGG----GGGCSSCHHHHHHHHHHHTCEEEECCSSSCSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECcch----hhcCccCHHHHHHHHHHcCCcEEEEeecCccccHHHHHHHHHHHHh
Confidence 36788777652221 111122223455677888999999988 666667777766665443
No 106
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=29.14 E-value=1.9e+02 Score=25.23 Aligned_cols=82 Identities=13% Similarity=0.069 Sum_probs=45.6
Q ss_pred CeeEEEeCccccCcchHHHHHHHHHHcCC--CEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCC---CHH
Q 016926 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 240 (380)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~L--pvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---D~~ 240 (380)
+++|++.|-|++.+ ..+......++ .++.|+.|+.- ....++|+.+|+|++.++-. +..
T Consensus 5 ki~vl~sG~g~~~~----~~l~~l~~~~l~~~I~~Vit~~~~------------~~v~~~A~~~gIp~~~~~~~~~~~~~ 68 (212)
T 3av3_A 5 RLAVFASGSGTNFQ----AIVDAAKRGDLPARVALLVCDRPG------------AKVIERAARENVPAFVFSPKDYPSKA 68 (212)
T ss_dssp EEEEECCSSCHHHH----HHHHHHHTTCCCEEEEEEEESSTT------------CHHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEECCcHHHH----HHHHHHHhCCCCCeEEEEEeCCCC------------cHHHHHHHHcCCCEEEeCcccccchh
Confidence 56788889887643 22222223333 46777766421 13567899999999987643 223
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEee
Q 016926 241 AIYSAVHAAREMAIGEGRPILIEALTY 267 (380)
Q Consensus 241 av~~a~~~a~~~ar~~~gP~lIe~~t~ 267 (380)
+..+.+.+.++ ..+|=+|.+.-|
T Consensus 69 ~~~~~~~~~l~----~~~~Dliv~a~y 91 (212)
T 3av3_A 69 AFESEILRELK----GRQIDWIALAGY 91 (212)
T ss_dssp HHHHHHHHHHH----HTTCCEEEESSC
T ss_pred hhHHHHHHHHH----hcCCCEEEEchh
Confidence 33333333332 245666665544
No 107
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=27.87 E-value=1.7e+02 Score=25.63 Aligned_cols=81 Identities=12% Similarity=0.082 Sum_probs=45.3
Q ss_pred CeeEEEeCccccCcchHHHHHHHHHHcCCC--EEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCCC---HH
Q 016926 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGND---AL 240 (380)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lp--vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D---~~ 240 (380)
+++|.+.|.|+.. +++--+...+++ |+.|+.|+.=+ .-.++|+.+|+|++.++-.+ -.
T Consensus 7 riavl~SG~Gsnl-----~all~~~~~~~~~eI~~Vis~~~~a------------~~~~~A~~~gIp~~~~~~~~~~~r~ 69 (215)
T 3tqr_A 7 PIVVLISGNGTNL-----QAIIGAIQKGLAIEIRAVISNRADA------------YGLKRAQQADIPTHIIPHEEFPSRT 69 (215)
T ss_dssp EEEEEESSCCHHH-----HHHHHHHHTTCSEEEEEEEESCTTC------------HHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCCcHHH-----HHHHHHHHcCCCCEEEEEEeCCcch------------HHHHHHHHcCCCEEEeCccccCchh
Confidence 4566677877653 445555444454 77788775311 11378999999999986322 22
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEee
Q 016926 241 AIYSAVHAAREMAIGEGRPILIEALTY 267 (380)
Q Consensus 241 av~~a~~~a~~~ar~~~gP~lIe~~t~ 267 (380)
+..+.+.+.++ + .+|=+|.+.-|
T Consensus 70 ~~d~~~~~~l~---~-~~~Dliv~agy 92 (215)
T 3tqr_A 70 DFESTLQKTID---H-YDPKLIVLAGF 92 (215)
T ss_dssp HHHHHHHHHHH---T-TCCSEEEESSC
T ss_pred HhHHHHHHHHH---h-cCCCEEEEccc
Confidence 22333333333 2 45655555444
No 108
>1abz_A Alpha-T-alpha, ATA; de novo design, helix-turn-helix, peptide; HET: SIN; NMR {} SCOP: k.15.1.1
Probab=27.42 E-value=49 Score=20.42 Aligned_cols=27 Identities=11% Similarity=0.117 Sum_probs=22.7
Q ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHH
Q 016926 301 RKWIESNGWWNGDIESELRSSVRKQIL 327 (380)
Q Consensus 301 ~~~L~~~g~~t~~e~~~i~~~~~~~v~ 327 (380)
-+.|.++|.-+..|+.++++..+++|.
T Consensus 12 lqaleargtdsnaelrameaklkaeiq 38 (40)
T 1abz_A 12 LQALEARGTDSNAELRAMEAKLKAEIQ 38 (40)
T ss_dssp HHHHHHTCSSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHh
Confidence 356778998889999999999998875
No 109
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=26.98 E-value=1e+02 Score=25.50 Aligned_cols=18 Identities=11% Similarity=0.001 Sum_probs=11.4
Q ss_pred HHHHHhhcCceEEEEeCC
Q 016926 220 AVVKGRAYGVRSIRVDGN 237 (380)
Q Consensus 220 ~~~~a~a~G~~~~~VdG~ 237 (380)
..+.++..|++++-+.++
T Consensus 98 ~~~~ak~~g~~vi~IT~~ 115 (186)
T 1m3s_A 98 TAAKAKSLHGIVAALTIN 115 (186)
T ss_dssp HHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHCCCEEEEEECC
Confidence 456666667777666654
No 110
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=26.47 E-value=1.3e+02 Score=24.66 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=14.9
Q ss_pred CeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEE
Q 016926 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICR 201 (380)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~ 201 (380)
.++|++.--|... .+.+++..|...+.++|.|..
T Consensus 84 d~vi~iS~sG~t~--~~~~~~~~ak~~g~~vi~IT~ 117 (180)
T 1jeo_A 84 DLLILISGSGRTE--SVLTVAKKAKNINNNIIAIVC 117 (180)
T ss_dssp CEEEEEESSSCCH--HHHHHHHHHHTTCSCEEEEES
T ss_pred CEEEEEeCCCCcH--HHHHHHHHHHHCCCcEEEEeC
Confidence 3444444444442 234444444444445444443
No 111
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=26.23 E-value=1.9e+02 Score=23.14 Aligned_cols=62 Identities=3% Similarity=0.067 Sum_probs=37.5
Q ss_pred cCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccC
Q 016926 192 TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEG 257 (380)
Q Consensus 192 ~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~ 257 (380)
.+.|+|+|++--.. ..............++.+|++.+.+...+-..+.+.+....+.+...+
T Consensus 110 ~~~p~ilv~nK~Dl----~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~~~~~~ 171 (181)
T 3t5g_A 110 VQIPIMLVGNKKDL----HMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKMD 171 (181)
T ss_dssp --CCEEEEEECTTC----TTTCCSCHHHHHHHHHHTTCEEEECCTTSHHHHHHHHHHHHHHHHTC-
T ss_pred CCCCEEEEEECccc----hhcceecHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHHHHhc
Confidence 36788777752221 111222223455678889999999988777777777777766555443
No 112
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=26.17 E-value=1.5e+02 Score=26.26 Aligned_cols=83 Identities=12% Similarity=-0.025 Sum_probs=54.5
Q ss_pred eEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccc--------cccCCcCHHHHHhhcCceEEEEeCCCH
Q 016926 168 AVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS--------DQFRSDGAVVKGRAYGVRSIRVDGNDA 239 (380)
Q Consensus 168 vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~--------~~~~~~~~~~~a~a~G~~~~~VdG~D~ 239 (380)
-++++|=+.... +.-.++...++++.+...++...+..-.. ......-..+.|+.+|++++-+.+ .
T Consensus 108 kIavVg~~~~~~----~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~~~~~~A~~~Gl~~vlI~s--~ 181 (225)
T 2pju_A 108 SIGVVTYQETIP----ALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYS--A 181 (225)
T ss_dssp CEEEEEESSCCH----HHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEESHHHHHHHHHTTSEEEESSC--H
T ss_pred cEEEEeCchhhh----HHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHcCCcEEEECC--H
Confidence 455555555533 34567788899988877766532211100 011122356889999999999994 6
Q ss_pred HHHHHHHHHHHHHhhcc
Q 016926 240 LAIYSAVHAAREMAIGE 256 (380)
Q Consensus 240 ~av~~a~~~a~~~ar~~ 256 (380)
+++..|+.+|++.++..
T Consensus 182 eSI~~Ai~eA~~l~~~~ 198 (225)
T 2pju_A 182 ATVRQAFSDALDMTRMS 198 (225)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999776654
No 113
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=26.17 E-value=41 Score=25.20 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=26.3
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 016926 297 VTRFRKWIESNGWWNGDIESELRSSVRKQILHALQE 332 (380)
Q Consensus 297 i~~~~~~L~~~g~~t~~e~~~i~~~~~~~v~~a~~~ 332 (380)
+..+-.+|.++|++|+++.+.|.++ ....+++.+.
T Consensus 24 v~~lld~L~~~~vlt~~~~e~I~~~-~t~~~kar~L 58 (94)
T 2p1h_A 24 TSYIMDHMISDGFLTISEEEKVRNE-PTQQQRAAML 58 (94)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTS-SSHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHcC-CChHHHHHHH
Confidence 5668889999999999999999886 3333444433
No 114
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=26.13 E-value=1.1e+02 Score=26.07 Aligned_cols=69 Identities=10% Similarity=-0.005 Sum_probs=42.5
Q ss_pred CEEEEEEcCCcccccccccc--cCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Q 016926 195 PVIFICRNNGWAISTPISDQ--FRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEA 264 (380)
Q Consensus 195 pvi~vv~NN~~~~~~~~~~~--~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~lIe~ 264 (380)
.+.+||.|..|.-. +.... .....+.+.++.+|+.+....--+..++.+++++..++....+..+++-+
T Consensus 44 g~ALIInn~~f~~~-~~R~G~~~Da~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~f~~~~d~~~~d~~v~~ 114 (178)
T 2h54_A 44 RLALIICNEEFDSI-PRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHRPEHKTSDSTFLV 114 (178)
T ss_dssp CEEEEEECCCCSSS-CCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTCGGGGGCSCEEEE
T ss_pred CEEEEEehhhcCCC-ccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhhhhcCCCCEEEEE
Confidence 36777777777421 11111 11235778889999999988878889999988886542212234455444
No 115
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=26.12 E-value=2.1e+02 Score=26.60 Aligned_cols=53 Identities=9% Similarity=-0.041 Sum_probs=35.3
Q ss_pred CCCeeEEEeCccccCcchHHHHHHHHHHcC-CC--EEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEe
Q 016926 164 KDACAVTYFGDGGTSEGDFHAALNFSAVTE-AP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 235 (380)
Q Consensus 164 ~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~-Lp--vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd 235 (380)
+.+++|...|.|+ ..++|--+...+ || |+.|+.|+. +...+|+.+|+|+..++
T Consensus 105 ~~ri~vl~Sg~g~-----nl~~ll~~~~~g~l~~~I~~Visn~~--------------~~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 105 KKRVVLMASRESH-----CLADLLHRWHSDELDCDIACVISNHQ--------------DLRSMVEWHDIPYYHVP 160 (302)
T ss_dssp CCEEEEEECSCCH-----HHHHHHHHHHTTCSCSEEEEEEESSS--------------TTHHHHHTTTCCEEECC
T ss_pred CcEEEEEEeCCch-----hHHHHHHHHHCCCCCcEEEEEEECcH--------------HHHHHHHHcCCCEEEcC
Confidence 3456677777764 345566665543 55 777887763 23467899999999984
No 116
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=25.90 E-value=76 Score=26.39 Aligned_cols=79 Identities=10% Similarity=0.044 Sum_probs=43.2
Q ss_pred CCeeEEEeCccccCcch--HHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCc-eEEEEeCCCHHH
Q 016926 165 DACAVTYFGDGGTSEGD--FHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGV-RSIRVDGNDALA 241 (380)
Q Consensus 165 ~~~vv~~~GDG~~~eG~--~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~-~~~~VdG~D~~a 241 (380)
...+++++.||..+.+. ..+++..+...++++..|-.-+... .......+..+|..-|- .++.++ |..+
T Consensus 110 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~------~~~~~~~L~~iA~~~~g~~~~~~~--~~~~ 181 (198)
T 1n3y_A 110 AAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQ------NRNSWKELNDIASKPSQEHIFKVE--DFDA 181 (198)
T ss_dssp SEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGG------SSTTHHHHHHHSCSSSGGGEEEES--SGGG
T ss_pred CceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEcccccc------ccccHHHHHHHHcCCCcccEEEeC--CHHH
Confidence 45789999999886443 3566777777777765554322110 00011223445544433 346665 5556
Q ss_pred HHHHHHHHHH
Q 016926 242 IYSAVHAARE 251 (380)
Q Consensus 242 v~~a~~~a~~ 251 (380)
+...+++..+
T Consensus 182 l~~~~~~i~~ 191 (198)
T 1n3y_A 182 LKDIQNQLKE 191 (198)
T ss_dssp GGGGHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6555555443
No 117
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=25.52 E-value=3e+02 Score=25.49 Aligned_cols=41 Identities=22% Similarity=0.138 Sum_probs=24.9
Q ss_pred HHHH-HHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCC
Q 016926 185 ALNF-SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN 237 (380)
Q Consensus 185 al~~-A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~ 237 (380)
++.. |+..++++++|+-.+- + ..-.+..+++|.+++.+++.
T Consensus 92 alA~aa~~~G~~~~iv~p~~~-----~-------~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAMPSTM-----S-------VERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp HHHHHHHHHTCCEEEEEETTS-----C-------HHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHHHcCCCEEEEECCCC-----C-------HHHHHHHHHCCCEEEEECCC
Confidence 3443 4568999888887651 1 11224566777777777653
No 118
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=24.84 E-value=2.4e+02 Score=27.56 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=34.8
Q ss_pred HHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhccCCcEE
Q 016926 189 SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPIL 261 (380)
Q Consensus 189 A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~~~gP~l 261 (380)
|+..++++++|+-.+- + ..-.+..++||.+++.+++.+ ...++.+.+.+.+++.++..+
T Consensus 194 Aa~~Gl~~~IvmP~~~-----s-------~~k~~~~r~~GAeVv~v~~~~--~~~~a~~~a~el~~~~~~~~~ 252 (430)
T 4aec_A 194 AASRGYRLILTMPASM-----S-------MERRVLLKAFGAELVLTDPAK--GMTGAVQKAEEILKNTPDAYM 252 (430)
T ss_dssp HHHHTCEEEEEEETTS-----C-------HHHHHHHHHTTCEEEEECGGG--HHHHHHHHHHHHHHHSTTEEE
T ss_pred HHHhCCEEEEEEcCCC-----C-------HHHHHHHHHCCCEEEEECCCC--ChHHHHHHHHHHHHhcCCcEE
Confidence 5678999888885441 1 123356788999999997432 233444555554444434333
No 119
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=24.72 E-value=1.3e+02 Score=24.69 Aligned_cols=20 Identities=15% Similarity=0.114 Sum_probs=13.0
Q ss_pred CHHHHHhhcCceEEEEeCCC
Q 016926 219 GAVVKGRAYGVRSIRVDGND 238 (380)
Q Consensus 219 ~~~~~a~a~G~~~~~VdG~D 238 (380)
...+.++.-|++++-+.++.
T Consensus 114 ~~~~~ak~~g~~vi~IT~~~ 133 (183)
T 2xhz_A 114 ALIPVLKRLHVPLICITGRP 133 (183)
T ss_dssp HHHHHHHTTTCCEEEEESCT
T ss_pred HHHHHHHHCCCCEEEEECCC
Confidence 35566777777777776543
No 120
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=24.66 E-value=2.6e+02 Score=25.90 Aligned_cols=41 Identities=17% Similarity=0.116 Sum_probs=24.9
Q ss_pred HHHH-HHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCC
Q 016926 185 ALNF-SAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN 237 (380)
Q Consensus 185 al~~-A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~ 237 (380)
++.. |+..++|+++|+-.+- + ..-....+.||..++.+++.
T Consensus 86 alA~aa~~~G~~~~iv~p~~~-----~-------~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 86 SLAHLGAIRGYKVIITMPESM-----S-------LERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHHHHHHHTCEEEEEEETTS-----C-------HHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHHHhCCCEEEEECCCC-----C-------HHHHHHHHHCCCEEEEECCC
Confidence 3444 4567999888875541 1 11234567788888877754
No 121
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=24.39 E-value=59 Score=27.23 Aligned_cols=34 Identities=9% Similarity=0.101 Sum_probs=27.4
Q ss_pred CCeeEEEeCccccCcchHHHHHHHHHHcCCCEEE
Q 016926 165 DACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIF 198 (380)
Q Consensus 165 ~~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~ 198 (380)
-++.+.++|-|....+...+...+|...++||+.
T Consensus 34 AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~~ 67 (170)
T 3cf4_G 34 AKRPLLMVGTLALDPELLDRVVKISKAANIPIAA 67 (170)
T ss_dssp CSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCEEEECCCccchhHHHHHHHHHHHhCCCEEE
Confidence 3567888898888777777888899999999853
No 122
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=24.11 E-value=1.2e+02 Score=26.30 Aligned_cols=79 Identities=14% Similarity=0.138 Sum_probs=40.9
Q ss_pred ccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCC-CEEEEEEcCCcccccccccccCCcCHHH
Q 016926 144 TIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQFRSDGAVV 222 (380)
Q Consensus 144 ~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~L-pvi~vv~NN~~~~~~~~~~~~~~~~~~~ 222 (380)
.+|.|.+..++..++.++..-+..+.++ .|+.+..+. +...+- .+++++...++... ..+..+
T Consensus 64 i~G~G~S~~~A~~~~~~l~~lg~~~~~~-~~~~~~~~~-------~~~~~~~DlvI~iS~SG~t~~--------~i~~~~ 127 (220)
T 3etn_A 64 TSGMGKAGQIAMNIATTFCSTGIPSVFL-HPSEAQHGD-------LGILQENDLLLLISNSGKTRE--------IVELTQ 127 (220)
T ss_dssp EECSHHHHHHHHHHHHHHHHTTCCEEEC-CTTGGGBTG-------GGGCCTTCEEEEECSSSCCHH--------HHHHHH
T ss_pred EEEecHHHHHHHHHHHHHHhcCCcEEEe-CCHHHHHhh-------hccCCCCCEEEEEcCCCCCHH--------HHHHHH
Confidence 3555556666666666665544444443 455443221 112222 36666655443211 124566
Q ss_pred HHhh--cCceEEEEeCCC
Q 016926 223 KGRA--YGVRSIRVDGND 238 (380)
Q Consensus 223 ~a~a--~G~~~~~VdG~D 238 (380)
.++. .|++++-+.++.
T Consensus 128 ~ak~~~~Ga~vI~IT~~~ 145 (220)
T 3etn_A 128 LAHNLNPGLKFIVITGNP 145 (220)
T ss_dssp HHHHHCTTCEEEEEESCT
T ss_pred HHHhcCCCCeEEEEECCC
Confidence 7777 788887776543
No 123
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=23.65 E-value=2.8e+02 Score=24.24 Aligned_cols=80 Identities=20% Similarity=0.102 Sum_probs=44.8
Q ss_pred CeeEEEeCccccCcchHHHHHHHHHHcCC--CEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCC---CHH
Q 016926 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGN---DAL 240 (380)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~L--pvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~---D~~ 240 (380)
+++|.+.|-|+.. +++--+...++ .|+.|+.|+. + ...++|+.+|+|++.++-. +-.
T Consensus 14 ri~vl~SG~gsnl-----~all~~~~~~~~~eI~~Vis~~~-a------------~~~~~A~~~gIp~~~~~~~~~~~r~ 75 (215)
T 3da8_A 14 RLVVLASGTGSLL-----RSLLDAAVGDYPARVVAVGVDRE-C------------RAAEIAAEASVPVFTVRLADHPSRD 75 (215)
T ss_dssp EEEEEESSCCHHH-----HHHHHHSSTTCSEEEEEEEESSC-C------------HHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCChHHH-----HHHHHHHhccCCCeEEEEEeCCc-h------------HHHHHHHHcCCCEEEeCcccccchh
Confidence 4555666876653 44444433245 4777777764 1 1357899999999998521 223
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEee
Q 016926 241 AIYSAVHAAREMAIGEGRPILIEALTY 267 (380)
Q Consensus 241 av~~a~~~a~~~ar~~~gP~lIe~~t~ 267 (380)
+..+.+.+.++ .-+|=+|.+--|
T Consensus 76 ~~d~~~~~~l~----~~~~Dlivlagy 98 (215)
T 3da8_A 76 AWDVAITAATA----AHEPDLVVSAGF 98 (215)
T ss_dssp HHHHHHHHHHH----TTCCSEEEEEEC
T ss_pred hhhHHHHHHHH----hhCCCEEEEcCc
Confidence 33333433333 245666665555
No 124
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=23.45 E-value=4e+02 Score=23.99 Aligned_cols=103 Identities=12% Similarity=-0.059 Sum_probs=58.2
Q ss_pred chHHHHHHHHHhhhcCCCCeeEEEe--Ccccc--CcchHHHHHHHHHHc-CCCEEEEEEcCCcccccccccccCCcCHHH
Q 016926 148 QLPHAVGAAYALKMDRKDACAVTYF--GDGGT--SEGDFHAALNFSAVT-EAPVIFICRNNGWAISTPISDQFRSDGAVV 222 (380)
Q Consensus 148 ~lp~A~G~A~A~k~~~~~~~vv~~~--GDG~~--~eG~~~Eal~~A~~~-~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~ 222 (380)
.++...-.+++.++..-+-.+|-+. +.+.+ +....+|.+..+... ++|+..++ -| ..-.+
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n--------------~~~i~ 86 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-PN--------------MKGYE 86 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-SS--------------HHHHH
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-CC--------------HHHHH
Confidence 3555555666666655444343333 22221 112466766665443 34554433 11 12235
Q ss_pred HHhhcCceEEEEe------------CCCHHHHHHHHHHHHHHhhccCCcEEEEEE
Q 016926 223 KGRAYGVRSIRVD------------GNDALAIYSAVHAAREMAIGEGRPILIEAL 265 (380)
Q Consensus 223 ~a~a~G~~~~~Vd------------G~D~~av~~a~~~a~~~ar~~~gP~lIe~~ 265 (380)
++...|++.+.++ +.+.++..+.++++++++++.+.++-.++.
T Consensus 87 ~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~ 141 (295)
T 1ydn_A 87 AAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVS 141 (295)
T ss_dssp HHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 6666799988887 457777778888888888887666544443
No 125
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=23.37 E-value=75 Score=32.05 Aligned_cols=42 Identities=21% Similarity=0.199 Sum_probs=29.6
Q ss_pred CCeeEEEeCccccCcch--------HHHHHHHHHHcCCCEEEEEEcCCcc
Q 016926 165 DACAVTYFGDGGTSEGD--------FHAALNFSAVTEAPVIFICRNNGWA 206 (380)
Q Consensus 165 ~~~vv~~~GDG~~~eG~--------~~Eal~~A~~~~Lpvi~vv~NN~~~ 206 (380)
++.|+++.-|..+.-|. +.-++.+|...++|+|.++++.+-.
T Consensus 90 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~~P~I~l~~SGGaR 139 (522)
T 1x0u_A 90 GRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGAR 139 (522)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBC
T ss_pred CEEEEEEEecCceeCccccHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCC
Confidence 35677777787775554 3456777888888888888766543
No 126
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=23.25 E-value=95 Score=26.58 Aligned_cols=32 Identities=6% Similarity=-0.146 Sum_probs=17.5
Q ss_pred eEEEeCccccCcchHHHHHHHHHHcCCCEEEE
Q 016926 168 AVTYFGDGGTSEGDFHAALNFSAVTEAPVIFI 199 (380)
Q Consensus 168 vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~v 199 (380)
++.+.||+....+...++...+...++.|.+|
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEE
Confidence 45555666444555555556566666554443
No 127
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=23.08 E-value=88 Score=31.59 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=30.7
Q ss_pred CCeeEEEeCccccCcch--------HHHHHHHHHHcCCCEEEEEEcCCccc
Q 016926 165 DACAVTYFGDGGTSEGD--------FHAALNFSAVTEAPVIFICRNNGWAI 207 (380)
Q Consensus 165 ~~~vv~~~GDG~~~eG~--------~~Eal~~A~~~~Lpvi~vv~NN~~~~ 207 (380)
++.|+++.-|..+..|. +.-++.+|...++|+|.+++..+-.+
T Consensus 94 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~~SGGARm 144 (523)
T 1on3_A 94 GRPVHAASQDFTVMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGGARI 144 (523)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCG
T ss_pred CEEEEEEEEcCCccCCcCcHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCCh
Confidence 45777788887776554 34467778888999988888766433
No 128
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=22.71 E-value=1.5e+02 Score=24.53 Aligned_cols=81 Identities=10% Similarity=0.080 Sum_probs=47.1
Q ss_pred ccccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCC-CEEEEEEcCCcccccccccccCCcCHHH
Q 016926 144 TIATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQFRSDGAVV 222 (380)
Q Consensus 144 ~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~L-pvi~vv~NN~~~~~~~~~~~~~~~~~~~ 222 (380)
.+|.|-+..++..++.++..-+..+.++.+|+.. +++ .+...+- .+++++...++... .....+
T Consensus 44 i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~----~~~---~~~~~~~~d~~i~iS~sG~t~~--------~~~~~~ 108 (187)
T 3sho_A 44 VVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGST----LTI---TLANLRPTDLMIGVSVWRYLRD--------TVAALA 108 (187)
T ss_dssp EECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHH----HHH---HHHTCCTTEEEEEECCSSCCHH--------HHHHHH
T ss_pred EEecCchHHHHHHHHHHHHhcCCCEEEecCCchh----HHH---HHhcCCCCCEEEEEeCCCCCHH--------HHHHHH
Confidence 3455556666666666666566667777655433 122 2222222 36666655443321 234668
Q ss_pred HHhhcCceEEEEeCCCH
Q 016926 223 KGRAYGVRSIRVDGNDA 239 (380)
Q Consensus 223 ~a~a~G~~~~~VdG~D~ 239 (380)
.++..|++++-+.++.-
T Consensus 109 ~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 109 GAAERGVPTMALTDSSV 125 (187)
T ss_dssp HHHHTTCCEEEEESCTT
T ss_pred HHHHCCCCEEEEeCCCC
Confidence 88899999999887543
No 129
>2xf7_A GP23.1; viral protein; 1.61A {Bacillus phage SPP1} PDB: 2xf5_A 2xf6_A
Probab=22.69 E-value=68 Score=21.16 Aligned_cols=33 Identities=9% Similarity=0.162 Sum_probs=22.6
Q ss_pred HHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHH
Q 016926 287 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRS 320 (380)
Q Consensus 287 ~~~~~~~~DPi~~~~~~L~~~g~~t~~e~~~i~~ 320 (380)
.+.|+ ....+.-.-+.-+++|-+|++|.++|.+
T Consensus 11 ~D~W~-~GT~~~~~mR~AV~~G~iTQ~E~D~I~~ 43 (51)
T 2xf7_A 11 LDSWL-DGTASEELLRVAVNAGDLTQEEADKIMS 43 (51)
T ss_dssp HHHHH-HTCCCHHHHHHHHHHTSSCHHHHHHHHT
T ss_pred HHHHh-cchhhHHHHHHHHhcCcccHHHHHHHHh
Confidence 35676 3555555445556789999999988753
No 130
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=22.52 E-value=46 Score=35.45 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=34.6
Q ss_pred CCCeeEEEeCccccCcchH--------HHHHHHHHHcCCCEEEEEEcCCccc
Q 016926 164 KDACAVTYFGDGGTSEGDF--------HAALNFSAVTEAPVIFICRNNGWAI 207 (380)
Q Consensus 164 ~~~~vv~~~GDG~~~eG~~--------~Eal~~A~~~~Lpvi~vv~NN~~~~ 207 (380)
.++.|+++.-|-.++-|.+ .-++.+|...++|+|++++|.+-.+
T Consensus 119 ~Gr~vvVianD~t~~gGS~g~~~~~K~~ra~elA~~~glP~I~l~dsgGARi 170 (793)
T 2x24_A 119 EGRDIILISNDITFRIGSFGPGEDLLYLRASELARAEGIPRVYLAANSGARI 170 (793)
T ss_dssp TCEEEEEEEECSSGGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCC
T ss_pred CCeEEEEEEECCcccCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCcCc
Confidence 4578888888877765544 3478889999999999999887655
No 131
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=22.40 E-value=81 Score=27.42 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=29.9
Q ss_pred CCeeEEEeCcccc-CcchHHHHHHHHH-HcCCCEEEEEEc
Q 016926 165 DACAVTYFGDGGT-SEGDFHAALNFSA-VTEAPVIFICRN 202 (380)
Q Consensus 165 ~~~vv~~~GDG~~-~eG~~~Eal~~A~-~~~Lpvi~vv~N 202 (380)
...+|+++|+-+- ..+..| ++..|. ..++|||.|--+
T Consensus 80 Sk~vIllIs~~T~~s~~v~w-EIe~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 80 SKNIILFLSSITANSRALRE-EMNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp EEEEEEECCTTCCCCHHHHH-HHHHHTTTTCCCEEEEETT
T ss_pred cCcEEEEEecCccccchhHH-HHHHHHHhcCCcEEEEECC
Confidence 4578999999887 455566 599999 999999998876
No 132
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=22.26 E-value=1.1e+02 Score=19.64 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=17.9
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHH
Q 016926 302 KWIESNGWWNGDIESELRSSVRKQ 325 (380)
Q Consensus 302 ~~L~~~g~~t~~e~~~i~~~~~~~ 325 (380)
+.|..+| ++.+|+.+++.+.++-
T Consensus 10 qalkkeg-fspeelaaleselqal 32 (48)
T 1g6u_A 10 QALKKEG-FSPEELAALESELQAL 32 (48)
T ss_dssp HHHHHTT-CSHHHHHHHHHHHHHH
T ss_pred HHHHHcC-CCHHHHHHHHHHHHHH
Confidence 4566778 6899999999888764
No 133
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.49 E-value=1.5e+02 Score=25.36 Aligned_cols=84 Identities=10% Similarity=0.030 Sum_probs=55.4
Q ss_pred eEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcCCcccccccc----c----ccCCcCHHHHHhhcCceEEEEeCCCH
Q 016926 168 AVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNNGWAISTPIS----D----QFRSDGAVVKGRAYGVRSIRVDGNDA 239 (380)
Q Consensus 168 vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~----~----~~~~~~~~~~a~a~G~~~~~VdG~D~ 239 (380)
-++++|=+....| .-.++...++++.+...+|...+..-.. . .....-..+.|+.+|++++-+. ...
T Consensus 96 kIavvg~~~~~~~----~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~~~~A~~~Gl~~vli~-sg~ 170 (196)
T 2q5c_A 96 ELALIAYKHSIVD----KHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKTVTDEAIKQGLYGETIN-SGE 170 (196)
T ss_dssp EEEEEEESSCSSC----HHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHHHHHHHHHTTCEEEECC-CCH
T ss_pred cEEEEeCcchhhH----HHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHHHHHHHHHcCCcEEEEe-cCH
Confidence 5666666666554 2457778889887777766543321111 0 1112235688999999999988 347
Q ss_pred HHHHHHHHHHHHHhhcc
Q 016926 240 LAIYSAVHAAREMAIGE 256 (380)
Q Consensus 240 ~av~~a~~~a~~~ar~~ 256 (380)
+++..|+.+|++-++..
T Consensus 171 eSI~~Ai~eA~~l~~~~ 187 (196)
T 2q5c_A 171 ESLRRAIEEALNLIEVR 187 (196)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999776653
No 134
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=21.37 E-value=5e+02 Score=24.12 Aligned_cols=112 Identities=14% Similarity=0.100 Sum_probs=70.5
Q ss_pred CCeeEEEeCccccCc-c--hHHHHHHHHHH--cCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeC--C
Q 016926 165 DACAVTYFGDGGTSE-G--DFHAALNFSAV--TEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG--N 237 (380)
Q Consensus 165 ~~~vv~~~GDG~~~e-G--~~~Eal~~A~~--~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG--~ 237 (380)
+.+||.-+..|+... | .+...+..|+. .++||++=.+--. ..+....+-..|+.++-+|| .
T Consensus 41 ~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~------------~~e~~~~ai~~GFtSVMiDgS~~ 108 (307)
T 3n9r_A 41 NSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGT------------TFESCEKAVKAGFTSVMIDASHH 108 (307)
T ss_dssp TCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEEC------------SHHHHHHHHHHTCSEEEECCTTS
T ss_pred CCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCC------------CHHHHHHHHHhCCCcEEEECCCC
Confidence 356777676666421 1 22233333433 5789877665321 12345566677999999998 4
Q ss_pred CHHHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCC----CCCCCCCChhhHHHH
Q 016926 238 DALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTS----DDSTKYRPVDEIEWW 290 (380)
Q Consensus 238 D~~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~----Dd~~~Yr~~~e~~~~ 290 (380)
+.++=.+..++.+++|+..+ +-||+..-+.+|.... ++...|.+|+|...+
T Consensus 109 p~eeNi~~Tk~vv~~ah~~g--vsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~F 163 (307)
T 3n9r_A 109 AFEENLELTSKVVKMAHNAG--VSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQF 163 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTT--CEEEEEESCCCCC----------CCSCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeccccCCcccccccccCCCHHHHHHH
Confidence 66777777888888877653 7789888888775321 123579999987765
No 135
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=21.29 E-value=1e+02 Score=26.04 Aligned_cols=78 Identities=12% Similarity=0.064 Sum_probs=41.9
Q ss_pred cccchHHHHHHHHHhhhcCCCCeeEEEeCccccCcchHHHHHHHHHHcCC-CEEEEEEcCCcccccccccccCCcCHHHH
Q 016926 145 IATQLPHAVGAAYALKMDRKDACAVTYFGDGGTSEGDFHAALNFSAVTEA-PVIFICRNNGWAISTPISDQFRSDGAVVK 223 (380)
Q Consensus 145 lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDG~~~eG~~~Eal~~A~~~~L-pvi~vv~NN~~~~~~~~~~~~~~~~~~~~ 223 (380)
+|.|.+..++..++.++..-+..+.++ .|..+..+ .+...+- .+++++...++... .....+.
T Consensus 51 ~G~G~S~~~A~~~~~~l~~~g~~~~~~-~~~~~~~~-------~~~~~~~~dvvI~iS~sG~t~~--------~~~~~~~ 114 (201)
T 3fxa_A 51 AGCGTSGVAAKKLVHSFNCIERPAVFL-TPSDAVHG-------TLGVLQKEDILILISKGGNTGE--------LLNLIPA 114 (201)
T ss_dssp ECCTHHHHHHHHHHHHHHHTTCCEEEC-CHHHHTTT-------GGGGCCTTCEEEEECSSSCCHH--------HHTTHHH
T ss_pred EEecHHHHHHHHHHHHHHhcCCcEEEe-CchHHHhh-------hhhcCCCCCEEEEEeCCCCCHH--------HHHHHHH
Confidence 455556666666666665544444443 34333211 1122222 37777765553221 1246677
Q ss_pred HhhcCceEEEEeCCC
Q 016926 224 GRAYGVRSIRVDGND 238 (380)
Q Consensus 224 a~a~G~~~~~VdG~D 238 (380)
++..|++++-+.++.
T Consensus 115 ak~~g~~vi~IT~~~ 129 (201)
T 3fxa_A 115 CKTKGSTLIGVTENP 129 (201)
T ss_dssp HHHHTCEEEEEESCT
T ss_pred HHHcCCeEEEEECCC
Confidence 888888888887654
No 136
>3hht_B NitrIle hydratase beta subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: b.34.4.4 PDB: 2dpp_B 1v29_B
Probab=21.22 E-value=1.8e+02 Score=25.96 Aligned_cols=29 Identities=10% Similarity=0.074 Sum_probs=24.1
Q ss_pred HHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHHH
Q 016926 287 IEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSS 321 (380)
Q Consensus 287 ~~~~~~~~DPi~~~~~~L~~~g~~t~~e~~~i~~~ 321 (380)
+++|- .-+.+.|+++|++|++|+++..++
T Consensus 73 Ye~WL------~ale~lLvekGvit~~EL~~r~~~ 101 (229)
T 3hht_B 73 YGHWI------ATVAYNLVDTGVLDEKELDERTEV 101 (229)
T ss_dssp HHHHH------HHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHh
Confidence 57783 468999999999999999886665
No 137
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=21.17 E-value=3.4e+02 Score=24.94 Aligned_cols=53 Identities=13% Similarity=-0.018 Sum_probs=34.6
Q ss_pred CCCeeEEEeCccccCcchHHHHHHHHHHc-CCC--EEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEe
Q 016926 164 KDACAVTYFGDGGTSEGDFHAALNFSAVT-EAP--VIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVD 235 (380)
Q Consensus 164 ~~~~vv~~~GDG~~~eG~~~Eal~~A~~~-~Lp--vi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~Vd 235 (380)
+.+++|...|.|+ ..++|--+... .|| ++.|+.|+. +...+|+.+|+|+..++
T Consensus 95 ~~ri~vl~Sg~g~-----~l~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 95 RPKVLIMVSKLEH-----CLADLLFRWKMGELKMDIVGIVSNHP--------------DFAPLAAQHGLPFRHFP 150 (292)
T ss_dssp CCEEEEEECSCCH-----HHHHHHHHHHHTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECC
T ss_pred CCEEEEEEcCCCc-----CHHHHHHHHHcCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeC
Confidence 3456677777764 34556555443 355 777887763 23356899999999875
No 138
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=20.77 E-value=1e+02 Score=25.79 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=27.2
Q ss_pred CeeEEEeCccccCcchHHHHHHHHHHcCCCEEEEEEcC
Q 016926 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEAPVIFICRNN 203 (380)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~Lpvi~vv~NN 203 (380)
..||+.++ ..+.|..+| +.+|...+.||+.+..++
T Consensus 79 D~vva~~~--~~d~Gt~~E-iGyA~algKPVi~l~~~~ 113 (165)
T 2khz_A 79 DVVVAEVT--QPSLGVGYE-LGRAVALGKPILCLFRPQ 113 (165)
T ss_dssp SEEEEECS--SCCHHHHHH-HHHHHHTCSSEEEEECTT
T ss_pred CEEEEECC--CCCCCHHHH-HHHHHHCCCEEEEEEcCC
Confidence 45566665 667788888 889999999999987655
No 139
>2e62_A Protein AT5G25060; CWF21 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Arabidopsis thaliana}
Probab=20.71 E-value=1.7e+02 Score=20.53 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=26.5
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q 016926 297 VTRFRKWIESNGWWNGDIESELRSSVRKQILHA 329 (380)
Q Consensus 297 i~~~~~~L~~~g~~t~~e~~~i~~~~~~~v~~a 329 (380)
+..|+..|.+.|..+.++++.--+..++.+...
T Consensus 25 ~me~rD~LEeqG~~~~~eI~~kV~~~RkkL~~~ 57 (61)
T 2e62_A 25 LIEYRETLEEQGMKNPEEIERKVEINRKRLEVD 57 (61)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHh
Confidence 345999999999988888888888888877643
No 140
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=20.65 E-value=1.2e+02 Score=24.16 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=35.6
Q ss_pred HHhhcCceEEEEeCCCHHHHHHHHHHHHHHhhc--cCCcEEEEEEe
Q 016926 223 KGRAYGVRSIRVDGNDALAIYSAVHAAREMAIG--EGRPILIEALT 266 (380)
Q Consensus 223 ~a~a~G~~~~~VdG~D~~av~~a~~~a~~~ar~--~~gP~lIe~~t 266 (380)
+...|++-++.+...|+.++.+.+.+-++.+-. .+.|++|++..
T Consensus 11 KG~~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~ 56 (120)
T 3ghf_A 11 KGSSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSG 56 (120)
T ss_dssp CCCCCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEE
T ss_pred EcCeeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccc
Confidence 456688999999889999999999888776554 36799999864
No 141
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.65 E-value=1.5e+02 Score=25.99 Aligned_cols=82 Identities=10% Similarity=0.084 Sum_probs=43.7
Q ss_pred CeeEEEeCccccCcchHHHHHHHHHHcCC--CEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeCCC---HH
Q 016926 166 ACAVTYFGDGGTSEGDFHAALNFSAVTEA--PVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGND---AL 240 (380)
Q Consensus 166 ~~vv~~~GDG~~~eG~~~Eal~~A~~~~L--pvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG~D---~~ 240 (380)
+++|.+.|-|++.+ ..+......++ .++.|+.|+.- ....++|+.+|++++.++-.+ -.
T Consensus 3 rI~vl~SG~g~~~~----~~l~~l~~~~~~~~i~~Vvs~~~~------------~~~~~~A~~~gIp~~~~~~~~~~~r~ 66 (216)
T 2ywr_A 3 KIGVLVSGRGSNLQ----AIIDAIESGKVNASIELVISDNPK------------AYAIERCKKHNVECKVIQRKEFPSKK 66 (216)
T ss_dssp EEEEEECSCCHHHH----HHHHHHHTTSSCEEEEEEEESCTT------------CHHHHHHHHHTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCCcHHHH----HHHHHHHhCCCCCeEEEEEeCCCC------------hHHHHHHHHcCCCEEEeCcccccchh
Confidence 35556668887642 22222223345 46777766421 124578999999999876432 22
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEEEee
Q 016926 241 AIYSAVHAAREMAIGEGRPILIEALTY 267 (380)
Q Consensus 241 av~~a~~~a~~~ar~~~gP~lIe~~t~ 267 (380)
+..+.+.+.++ ..+|=+|.+.-|
T Consensus 67 ~~~~~~~~~l~----~~~~Dliv~a~y 89 (216)
T 2ywr_A 67 EFEERMALELK----KKGVELVVLAGF 89 (216)
T ss_dssp HHHHHHHHHHH----HTTCCEEEESSC
T ss_pred hhhHHHHHHHH----hcCCCEEEEeCc
Confidence 22233333332 235666665555
No 142
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=20.31 E-value=5.2e+02 Score=23.95 Aligned_cols=113 Identities=16% Similarity=0.161 Sum_probs=72.7
Q ss_pred CCeeEEEeCccccCc-c--hHHHHHHHHHHcCCCEEEEEEcCCcccccccccccCCcCHHHHHhhcCceEEEEeC--CCH
Q 016926 165 DACAVTYFGDGGTSE-G--DFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDG--NDA 239 (380)
Q Consensus 165 ~~~vv~~~GDG~~~e-G--~~~Eal~~A~~~~Lpvi~vv~NN~~~~~~~~~~~~~~~~~~~~a~a~G~~~~~VdG--~D~ 239 (380)
+.++|.-+..|+... | .+...+..++...+||++=.+--. ..+....+-..|+.++-+|| .+.
T Consensus 41 ~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~~~VPValHlDHg~------------~~e~~~~ai~~GFtSVMiDgS~~p~ 108 (305)
T 1rvg_A 41 RSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGS------------SYESVLRALRAGFTSVMIDKSHEDF 108 (305)
T ss_dssp TCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEEC------------SHHHHHHHHHTTCSEEEECCTTSCH
T ss_pred CCCEEEECChhHHhhCCHHHHHHHHHHHHhCCCcEEEECCCCC------------CHHHHHHHHHcCCCeeeeCCCCCCH
Confidence 457777777776531 1 122222223337789887765321 12345566677999999998 456
Q ss_pred HHHHHHHHHHHHHhhccCCcEEEEEEeecCCCCCCC----CCCCCCCChhhHHHHH
Q 016926 240 LAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTS----DDSTKYRPVDEIEWWR 291 (380)
Q Consensus 240 ~av~~a~~~a~~~ar~~~gP~lIe~~t~R~~gHs~~----Dd~~~Yr~~~e~~~~~ 291 (380)
++=.+..++.+++|+..+ +-||+..-+.+|.... +....|.+|+|...+-
T Consensus 109 eENi~~Tk~vv~~ah~~g--vsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv 162 (305)
T 1rvg_A 109 ETNVRETRRVVEAAHAVG--VTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFM 162 (305)
T ss_dssp HHHHHHHHHHHHHHHHTT--CEEEEEESCCCCSCC------CCTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC--CEEEEEEeeccCccCCccccccccccCCHHHHHHHH
Confidence 677777888888877654 7889999888874321 1234699999877663
No 143
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=20.03 E-value=95 Score=31.53 Aligned_cols=43 Identities=19% Similarity=0.165 Sum_probs=32.5
Q ss_pred CCeeEEEeCccccCcch--------HHHHHHHHHHcCCCEEEEEEcCCccc
Q 016926 165 DACAVTYFGDGGTSEGD--------FHAALNFSAVTEAPVIFICRNNGWAI 207 (380)
Q Consensus 165 ~~~vv~~~GDG~~~eG~--------~~Eal~~A~~~~Lpvi~vv~NN~~~~ 207 (380)
++.|+++.-|..+.-|. +.-++.+|...++|+|.+++..+-.+
T Consensus 107 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~dSGGARm 157 (548)
T 2bzr_A 107 GRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARI 157 (548)
T ss_dssp TEEEEEEEECTTSGGGCCCHHHHHHHHHHHHHHHHHTCCEEEEECCCSCCG
T ss_pred CEEEEEEEEcCccccCCCChhHHHHHHHHHHHHHHcCCCEEEEEcCCCCCc
Confidence 46788888888876555 34577889999999999998666433
Done!