BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016927
(380 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224074577|ref|XP_002304393.1| predicted protein [Populus trichocarpa]
gi|222841825|gb|EEE79372.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 266/375 (70%), Positives = 313/375 (83%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
++SQG+RL+F++ S++ I +++S FNK +A+D+VSVGDSWLSFAIK +
Sbjct: 44 IQSQGRRLRFRVKYLGSLENIFSDISASFNKRNIGPMSTVASDIVSVGDSWLSFAIKNAI 103
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
IEP+ G E+QDWFK LS KWKVYLRRN GEIDP G+IWAAPYRWG+MVIAYKKSKF++H
Sbjct: 104 IEPVRGVEEQDWFKGLSDKWKVYLRRNHEGEIDPEGEIWAAPYRWGSMVIAYKKSKFQEH 163
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
LAPIEDW DLWRPELAGRISMV+SPREV+GSVLKYMGASYN+ NIDLQV GGK +VQQN
Sbjct: 164 KLAPIEDWADLWRPELAGRISMVDSPREVVGSVLKYMGASYNTKNIDLQVPGGKNAVQQN 223
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
LALL Q RLFDS +YLK F +GD WVAVGWSSDVLP KRMSNVAVVVPKSG SLWADL
Sbjct: 224 LALLGKQVRLFDSMYYLKTFSMGDAWVAVGWSSDVLPIAKRMSNVAVVVPKSGTSLWADL 283
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIPAA++LET QIGGR+RGPSPLIHQWIEFCLQ ARALPFKQEVIPGA+PSA+E ++++
Sbjct: 284 WAIPAATKLETNQIGGRIRGPSPLIHQWIEFCLQAARALPFKQEVIPGATPSAIENSVIE 343
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P+EL KGKP DTNLI GVPP EIL +CEFLEPL +ATLSDY+ L+ +Q P P L+ R
Sbjct: 344 VPKELTKGKPKLDTNLIAGVPPPEILTKCEFLEPLPDATLSDYKLLIRTMQIPDPGLIHR 403
Query: 361 VQHYLSSLIQSFLAK 375
+QHY+ S I +F K
Sbjct: 404 IQHYILSTIHTFRLK 418
>gi|255557729|ref|XP_002519894.1| transporter, putative [Ricinus communis]
gi|223540940|gb|EEF42498.1| transporter, putative [Ricinus communis]
Length = 507
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 271/385 (70%), Positives = 319/385 (82%), Gaps = 6/385 (1%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFN------KVKAKSAPYMAADLVSVGDSWLSF 54
M+SQGKRL+ + L +D I ++LS+ F+ KV S+ AAD+VS+GDSWLSF
Sbjct: 121 MQSQGKRLRLRSKLVGGLDNIFSDLSMSFSNNNIKRKVNIGSSSVAAADIVSIGDSWLSF 180
Query: 55 AIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKK 114
AI+K LIEPI G EDQDWFK LS KWKVYLRRN G IDP G+IW APYRWG+MVIAYKK
Sbjct: 181 AIQKALIEPIRGVEDQDWFKGLSDKWKVYLRRNCEGSIDPNGEIWGAPYRWGSMVIAYKK 240
Query: 115 SKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGK 174
SKF+K+ LAPIEDW DLWRP+L GRISM++SPREV+G+VLKYMGASYN+ +I+L+V GGK
Sbjct: 241 SKFQKNKLAPIEDWADLWRPDLKGRISMIDSPREVVGAVLKYMGASYNAKDIELEVHGGK 300
Query: 175 ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGA 234
+VQ+NLAL Q RLFDS HYLKAFG+GDVWVAVGWSSDVLP KRMSN+AVVVPKSG+
Sbjct: 301 SAVQENLALFGKQVRLFDSMHYLKAFGVGDVWVAVGWSSDVLPVAKRMSNIAVVVPKSGS 360
Query: 235 SLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 294
SLWADLWAIPAASRL T +IGGRVRGPSPLIHQWIEFCLQ ARA+PFKQEVIPGASPSAL
Sbjct: 361 SLWADLWAIPAASRLATNRIGGRVRGPSPLIHQWIEFCLQAARAMPFKQEVIPGASPSAL 420
Query: 295 ETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPA 354
E+T V++PEEL +GKP DTNLI GVPP EIL+RCEFLEPLS+A L DY+WL+A +Q+P
Sbjct: 421 ESTPVEVPEELTRGKPRLDTNLIAGVPPPEILSRCEFLEPLSDAQLLDYKWLIASMQQPG 480
Query: 355 PVLMKRVQHYLSSLIQSFLAKATLK 379
P L+ R+ Y+SSL++S K+ K
Sbjct: 481 PNLIHRIHPYISSLVRSVGRKSDSK 505
>gi|449455671|ref|XP_004145575.1| PREDICTED: uncharacterized protein LOC101211357 [Cucumis sativus]
gi|449485058|ref|XP_004157059.1| PREDICTED: uncharacterized protein LOC101230567 [Cucumis sativus]
Length = 549
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/380 (69%), Positives = 313/380 (82%), Gaps = 2/380 (0%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
++SQGKRLKF + S++ I + LSVP K K K + M AD+VS+GDSWL+FAIKK L
Sbjct: 166 IQSQGKRLKFTVKFNGSLESIFSELSVPVGKSKVKPSSIMVADVVSIGDSWLNFAIKKAL 225
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
IEPI EDQDW+ LS KWKV LRRN GEIDP GKIW+APYRWG MVIAY K KFRK+
Sbjct: 226 IEPIQDVEDQDWYNNLSTKWKVLLRRNSEGEIDPEGKIWSAPYRWGCMVIAYNKVKFRKN 285
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
NLAP+EDW DLW PEL GRISMV+SPREVIG+VLKYMGASYN+ NI Q+ GG+ ++ QN
Sbjct: 286 NLAPMEDWSDLWCPELRGRISMVDSPREVIGAVLKYMGASYNTENISSQIPGGRDAIHQN 345
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L LLA Q RLFDS HYLKAF +GDVWVAVGWSSDVLP VKRMSN+AVVVPKSG+SLWADL
Sbjct: 346 LTLLAKQVRLFDSAHYLKAFAVGDVWVAVGWSSDVLPVVKRMSNIAVVVPKSGSSLWADL 405
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIPA SR+ET+ IGGRVRGPSPL HQWIEFCLQTARALPFKQEV+PGASP+A+E +V
Sbjct: 406 WAIPATSRIETEPIGGRVRGPSPLFHQWIEFCLQTARALPFKQEVVPGASPAAIEGPVV- 464
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P+EL +GKP DTNLI GVPP++IL +CEFL+PLS++TL+DY WL A++QKP LM R
Sbjct: 465 VPKELFEGKPKLDTNLIGGVPPSDILEKCEFLQPLSDSTLADYRWLAANMQKPEHRLMDR 524
Query: 361 VQHYLSSLIQSFLAKATLKS 380
V +SSL++ F+++ +LK+
Sbjct: 525 VHQAVSSLVR-FVSQISLKN 543
>gi|225427562|ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
gi|296085502|emb|CBI29234.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/380 (68%), Positives = 307/380 (80%), Gaps = 2/380 (0%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
M+SQG+RL+ N S+ I + L P +K K + +AAD+V+VGDSWL AI K +
Sbjct: 174 MQSQGRRLRLLSNFRGSLQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINKGI 233
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
IEPI G EDQDWF+ LS+KWKVYLRRN GE+D GKIWAAPYRWG+MVIAYKKSKF KH
Sbjct: 234 IEPIQGVEDQDWFRGLSYKWKVYLRRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFEKH 293
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
LAPIEDW DLWRPELAGRISM++SPREV+G+VLKYMGASYN++NI+LQV GG+ +VQQN
Sbjct: 294 KLAPIEDWADLWRPELAGRISMIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQN 353
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L LLA Q R FDSTHY+KA +GDVWVAVGWSSDVLPA KRMSNVAV+VPKSGASLWADL
Sbjct: 354 LMLLAKQVRCFDSTHYIKALSVGDVWVAVGWSSDVLPAAKRMSNVAVIVPKSGASLWADL 413
Query: 241 WAIPAASRLE-TKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLV 299
WAIP+ S+LE ++QIGGRVRGPSP+IHQWIEFCLQ ARA PF +EVIPGASPSA+E V
Sbjct: 414 WAIPSTSKLERSRQIGGRVRGPSPVIHQWIEFCLQAARAFPFTEEVIPGASPSAIECASV 473
Query: 300 KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMK 359
+ P EL KGKP +TNLI G+PP EILA CEFLEPLS+ATLSDY L+A +QKP+ L+
Sbjct: 474 EAPRELTKGKPKLETNLIAGMPPPEILAHCEFLEPLSDATLSDYRGLIAGIQKPSHGLIH 533
Query: 360 RVQHYLSSLIQSFLAKATLK 379
+ Y+ SL + F ++ LK
Sbjct: 534 GLHRYILSL-KEFFQQSYLK 552
>gi|147822062|emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
Length = 875
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 257/394 (65%), Positives = 305/394 (77%), Gaps = 16/394 (4%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
M+SQG+RL+ N S+ I + L P +K K + +AAD+V+VGDSWL AI K +
Sbjct: 482 MQSQGRRLRLLSNFRGSLQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINKGI 541
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLR--------------RNDAGEIDPRGKIWAAPYRWG 106
IEPI G EDQDWF+ LS+KWK Y + RN GE+D GKIWAAPYRWG
Sbjct: 542 IEPIQGVEDQDWFRGLSYKWKGYFKFDTDWFRSFYVIFKRNSKGELDAEGKIWAAPYRWG 601
Query: 107 TMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI 166
+MVIAYKKSKF KH LAPIEDW DLWRPELAGRISM++SPREV+G+VLKYMGASYN++NI
Sbjct: 602 SMVIAYKKSKFEKHKLAPIEDWADLWRPELAGRISMIDSPREVVGAVLKYMGASYNTDNI 661
Query: 167 DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 226
+LQV GG+ +VQQNL LLA Q R FDSTHY+KA +GDVWVAVGWSSDVLPA KRMSNVA
Sbjct: 662 ELQVNGGRNAVQQNLMLLAKQVRCFDSTHYIKALSVGDVWVAVGWSSDVLPAAKRMSNVA 721
Query: 227 VVVPKSGASLWADLWAIPAASRLE-TKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV 285
V+VPKSGASLWADLWAIP+ S+LE ++QIGGRVRGPSP+IHQWIEFCLQ ARA PF +EV
Sbjct: 722 VIVPKSGASLWADLWAIPSTSKLERSRQIGGRVRGPSPVIHQWIEFCLQAARAFPFTEEV 781
Query: 286 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEW 345
IPGASPSA+E V+ P EL KGKP +TNLI G+PP EILA CEFLEPLS+ATLSDY
Sbjct: 782 IPGASPSAIECASVEAPRELTKGKPKLETNLIAGMPPPEILAHCEFLEPLSDATLSDYRG 841
Query: 346 LVADLQKPAPVLMKRVQHYLSSLIQSFLAKATLK 379
L+A +QKP+ L+ + Y+ SL + F ++ LK
Sbjct: 842 LIAGIQKPSHGLIHGLHRYILSL-KEFFQQSYLK 874
>gi|356559069|ref|XP_003547824.1| PREDICTED: uncharacterized protein LOC100781794 [Glycine max]
Length = 552
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 246/368 (66%), Positives = 302/368 (82%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ SQG+R+KF + AS++ I ++LS+PF K K A +AAD+V +GDSW+ FAI K +
Sbjct: 173 INSQGRRMKFNVKYYASLENIFSDLSIPFTKGKIGPASALAADIVGIGDSWVKFAINKAI 232
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
IEPI EDQ+WFK L KWKVYLRRN GE+DP+G IWAAPYRWG MVIAYK +KF+KH
Sbjct: 233 IEPIRDVEDQEWFKSLDDKWKVYLRRNREGEMDPKGDIWAAPYRWGCMVIAYKTNKFQKH 292
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
LAP+EDW DLWRP+LAGRISMV+SPREVIG+VLKYMGASYN+N+I+++V GG+ +V+ N
Sbjct: 293 KLAPVEDWADLWRPDLAGRISMVDSPREVIGAVLKYMGASYNTNDINMEVNGGRDAVKHN 352
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
LALLA Q RLFDS++YLKAFG+GDVWVAVGWSSD++PA KRMSNVAVVVPKSGASLWADL
Sbjct: 353 LALLAKQVRLFDSSNYLKAFGVGDVWVAVGWSSDIIPAAKRMSNVAVVVPKSGASLWADL 412
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIPAASR++T +IGGR+RGPSPLIHQWIEFCLQ+ARALPFKQEVIPGASPS L+
Sbjct: 413 WAIPAASRIQTNRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQGHSAN 472
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P EL KG P + NL+ G PP +IL +CEFLEPLS +TLSDY WL+ +Q+P L+ +
Sbjct: 473 VPVELTKGGPRLNGNLVDGAPPPDILEKCEFLEPLSNSTLSDYHWLLTSIQEPGHGLIHK 532
Query: 361 VQHYLSSL 368
+ + S+
Sbjct: 533 MYQNIISV 540
>gi|357517389|ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago truncatula]
gi|355523005|gb|AET03459.1| RING-H2 finger protein ATL5F [Medicago truncatula]
Length = 786
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 243/369 (65%), Positives = 300/369 (81%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ SQG R+KF++ A+++ I ++LS+PF K +AAD+V +GDSWL FA++K +
Sbjct: 173 INSQGNRMKFKVKYYATLESIFSDLSIPFTKGDHVPTTALAADIVGIGDSWLKFAVEKAI 232
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
IEPI E Q+WFK L+ KWKVYLRRN GE+DP G IWAAPYRWG MVIAYK + F+KH
Sbjct: 233 IEPIKDVEGQEWFKNLAEKWKVYLRRNCEGEVDPEGDIWAAPYRWGCMVIAYKTNSFQKH 292
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
LAPIEDW DLWRP+LAGRISMV+SPREV+G+VLKYMGASYN+N+I+L+V GG+ +V+ N
Sbjct: 293 KLAPIEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGASYNANDINLEVNGGRDAVKHN 352
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
LALLA Q RLFDS +YLKAFG+GDVWVAVGWSSD++P KRMSNVAV+VPKSGASLWADL
Sbjct: 353 LALLAKQVRLFDSENYLKAFGVGDVWVAVGWSSDIIPVAKRMSNVAVIVPKSGASLWADL 412
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIPAAS+++T +IGGRVRGPSPLIHQWIEFCLQ+ARALPFKQEVIPGASP L+
Sbjct: 413 WAIPAASKIQTSRIGGRVRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPPLLQGHSTN 472
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+ EL KG+P TNLI G PP +IL RCEFLEPLS + +SDY WL+A +Q+P L+ +
Sbjct: 473 VALELTKGRPRLVTNLIDGAPPPDILERCEFLEPLSNSAVSDYHWLLASIQEPGNGLIHK 532
Query: 361 VQHYLSSLI 369
++ Y+SSL+
Sbjct: 533 MRQYISSLV 541
>gi|356560607|ref|XP_003548582.1| PREDICTED: uncharacterized protein LOC100809061 [Glycine max]
Length = 508
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 242/370 (65%), Positives = 298/370 (80%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ SQG+R+KF + AS++ + ++ S+PF K K A +AAD+V +GDSWL FAI K +
Sbjct: 129 INSQGRRMKFNVKYYASLENMFSDPSIPFTKGKIGPASALAADIVGIGDSWLKFAINKGI 188
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
IEPI EDQ+WFK L KWKVYLRRN GEIDP+G IWA+PYRWG MVIAYK +KF+KH
Sbjct: 189 IEPIRDVEDQEWFKSLDDKWKVYLRRNCEGEIDPKGDIWASPYRWGCMVIAYKTNKFQKH 248
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
LAP+EDW DLWRP+LAGRI MV+SPREV+G+VLKYMGASYN+N+I+ +V GG+ V+ N
Sbjct: 249 KLAPVEDWADLWRPDLAGRILMVDSPREVVGAVLKYMGASYNTNDINAEVNGGRDVVKHN 308
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
LALLA Q RLFDS++YLKAFG+GD WVAVGWSSD++PA KRMSNVAVVVPKSG SLWADL
Sbjct: 309 LALLAKQVRLFDSSNYLKAFGVGDAWVAVGWSSDIIPAAKRMSNVAVVVPKSGVSLWADL 368
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIPAASR++T +IGGR+RGPSPLIHQWIEFCLQ+ARALPFKQEVIPGASPS L+
Sbjct: 369 WAIPAASRIQTNRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQGHSAN 428
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P EL KG P + NL+ G PP +IL RCEFLEPLS +TLSDY WL+ +Q+P L+ +
Sbjct: 429 VPVELTKGGPRINGNLVDGAPPPDILERCEFLEPLSNSTLSDYHWLLTSIQEPGHGLIHK 488
Query: 361 VQHYLSSLIQ 370
+ + S+++
Sbjct: 489 MYQNIISVVK 498
>gi|28393765|gb|AAO42292.1| unknown protein [Arabidopsis thaliana]
Length = 524
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/379 (62%), Positives = 296/379 (78%), Gaps = 4/379 (1%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
M SQGKR++ + +++ I +LS P K +A AAD++S+GDSWLSFAIK++L
Sbjct: 137 MSSQGKRVRLKTQFRGNLEEIFFDLSKPSKNGKKGAASTAAADMISIGDSWLSFAIKEKL 196
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
IEP+ G EDQDW+K LS KWK+YLRRN AGE P G+ WA PYRWGTMVIAYKKSKF+ +
Sbjct: 197 IEPMKGIEDQDWYKGLSDKWKIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNY 256
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
LAPIEDW DLWRPELAGRI+MVNSPREV+G+VLKYM ASYN+ ++D QV GG+++V++N
Sbjct: 257 KLAPIEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEEN 316
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
LA L Q RLFDS +YLKAF +GDVWV VGWSSDV+P KRMSNV V+VPKSGA+LWADL
Sbjct: 317 LASLMKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADL 376
Query: 241 WAIPAASR--LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTL 298
WAIPA S E +Q GGRVRGPSPLI+QWIEFCLQ AR+LPF +EVIPGASPSAL+ L
Sbjct: 377 WAIPAVSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPL 436
Query: 299 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPA--PV 356
V PE+ K + DTNL+ GVPP EIL++CEFLEPL EATLS+Y L+ ++K + P
Sbjct: 437 VTEPEKTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLLIETVRKQSQRPG 496
Query: 357 LMKRVQHYLSSLIQSFLAK 375
L+++++ +S ++ F AK
Sbjct: 497 LVEKLKDIVSIKVRGFRAK 515
>gi|30692516|ref|NP_174426.2| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
gi|51536594|gb|AAU05535.1| At1g31410 [Arabidopsis thaliana]
gi|332193231|gb|AEE31352.1| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
Length = 524
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/379 (62%), Positives = 296/379 (78%), Gaps = 4/379 (1%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
M SQGKR++ + +++ I +LS P K +A AAD++S+GDSWLSFAIK++L
Sbjct: 137 MSSQGKRVRLKTQFRGNLEEIFFDLSKPSKNGKKGAASTAAADMISIGDSWLSFAIKEKL 196
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
IEP+ G EDQDW+K LS KWK+YLRRN AGE P G+ WA PYRWGTMVIAYKKSKF+ +
Sbjct: 197 IEPMKGIEDQDWYKGLSDKWKIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNY 256
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
LAPIEDW DLWRPELAGRI+MVNSPREV+G+VLKYM ASYN+ ++D QV GG+++V++N
Sbjct: 257 KLAPIEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKN 316
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
LA L Q RLFDS +YLKAF +GDVWV VGWSSDV+P KRMSNV V+VPKSGA+LWADL
Sbjct: 317 LASLMKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADL 376
Query: 241 WAIPAASR--LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTL 298
WAIPA S E +Q GGRVRGPSPLI+QWIEFCLQ AR+LPF +EVIPGASPSAL+ L
Sbjct: 377 WAIPAVSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPL 436
Query: 299 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPA--PV 356
V PE+ K + DTNL+ GVPP EIL++CEFLEPL EATLS+Y L+ ++K + P
Sbjct: 437 VTEPEKTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLLIETVRKQSQRPG 496
Query: 357 LMKRVQHYLSSLIQSFLAK 375
L+++++ +S ++ F AK
Sbjct: 497 LVEKLKDIVSIKVRGFRAK 515
>gi|12322546|gb|AAG51275.1|AC027135_16 hypothetical protein [Arabidopsis thaliana]
Length = 526
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/381 (62%), Positives = 296/381 (77%), Gaps = 6/381 (1%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
M SQGKR++ + +++ I +LS P K +A AAD++S+GDSWLSFAIK++L
Sbjct: 137 MSSQGKRVRLKTQFRGNLEEIFFDLSKPSKNGKKGAASTAAADMISIGDSWLSFAIKEKL 196
Query: 61 IEPIAGAEDQDWFKCLSHKWK--VYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFR 118
IEP+ G EDQDW+K LS KWK +YLRRN AGE P G+ WA PYRWGTMVIAYKKSKF+
Sbjct: 197 IEPMKGIEDQDWYKGLSDKWKSQIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQ 256
Query: 119 KHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 178
+ LAPIEDW DLWRPELAGRI+MVNSPREV+G+VLKYM ASYN+ ++D QV GG+++V+
Sbjct: 257 NYKLAPIEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVE 316
Query: 179 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 238
+NLA L Q RLFDS +YLKAF +GDVWV VGWSSDV+P KRMSNV V+VPKSGA+LWA
Sbjct: 317 KNLASLMKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWA 376
Query: 239 DLWAIPAASR--LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALET 296
DLWAIPA S E +Q GGRVRGPSPLI+QWIEFCLQ AR+LPF +EVIPGASPSAL+
Sbjct: 377 DLWAIPAVSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDG 436
Query: 297 TLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPA-- 354
LV PE+ K + DTNL+ GVPP EIL++CEFLEPL EATLS+Y L+ ++K +
Sbjct: 437 PLVTEPEKTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLLIETVRKQSQR 496
Query: 355 PVLMKRVQHYLSSLIQSFLAK 375
P L+++++ +S ++ F AK
Sbjct: 497 PGLVEKLKDIVSIKVRGFRAK 517
>gi|297846532|ref|XP_002891147.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
gi|297336989|gb|EFH67406.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/379 (62%), Positives = 294/379 (77%), Gaps = 4/379 (1%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
M SQGKR++ + A+++ I +LS P K + SA AAD++S+GDSWL AI+++L
Sbjct: 136 MSSQGKRVRLKTRFRANLEEIFFDLSKPTRKGQKGSASTAAADMISIGDSWLCHAIREKL 195
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
IEP+ G EDQDW+K LS KWK+YL RN AGE P G+ WA PYRWGTMVIAYKKSKF+ +
Sbjct: 196 IEPMKGIEDQDWYKGLSEKWKIYLCRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNY 255
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
LAPIEDW DLWRPELAGRI+MVNSPREV+G+VLKYMGASYN+ ++D QV GG+I+V++N
Sbjct: 256 KLAPIEDWADLWRPELAGRIAMVNSPREVVGAVLKYMGASYNTTDLDSQVPGGRIAVEKN 315
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
LA L Q RLFDS +YLKAF +GDVWV VGWSSDV+P KRMSNV V+VPKSGA+LWADL
Sbjct: 316 LASLMKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADL 375
Query: 241 WAIPAASR--LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTL 298
WAIPA S E +QIGGRVRGPSPLI+QWIEFCLQ AR+LPF +EVIPGASPSAL+ L
Sbjct: 376 WAIPAVSDSGKEAEQIGGRVRGPSPLINQWIEFCLQPARSLPFTREVIPGASPSALDGPL 435
Query: 299 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPV-- 356
V+ PE+ K + DTNL+ GVP EIL++CEFLEPL EATL +Y L+ ++K +
Sbjct: 436 VREPEKTKKDRTKLDTNLVTGVPLPEILSKCEFLEPLPEATLLEYRLLIETVRKQSQRHG 495
Query: 357 LMKRVQHYLSSLIQSFLAK 375
L+K++Q +S ++ F K
Sbjct: 496 LVKKIQDIVSIKVRGFRTK 514
>gi|38344144|emb|CAE01823.2| OSJNBa0041A02.11 [Oryza sativa Japonica Group]
Length = 422
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/369 (59%), Positives = 296/369 (80%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ +QGKRLKF ++D + + +S +K + K MAAD+VS+GDSWL +AI+K L
Sbjct: 48 VEAQGKRLKFSPEFRTNLDVLYSEMSQCLDKGQLKQKSAMAADVVSIGDSWLGYAIRKGL 107
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
+EP+ AE+QDWF+ LS++WK++L RN GE+DP G IWA PYRWGT+VIAYKK+KF++H
Sbjct: 108 VEPVKNAEEQDWFQSLSNRWKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRH 167
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
NL PI+DW DLWRPELAG+ISMV+SPREVIG+VLK++G+SYN+N+++ ++ GG+ +V ++
Sbjct: 168 NLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLES 227
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L L NQ +LFDST+YLK+FG+GDVWVAVGWSSDV+PA KRMS+VAVVVPKSG+SLWADL
Sbjct: 228 LTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADL 287
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIP+A++ +T +IGGR RGPSPLI+QW +FCLQ+AR+LPF+Q+VIPGASP LE + +
Sbjct: 288 WAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPE 347
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P+E K KP +TNL+ G PP EIL +CEFLEPLSE L DY+WL+ +Q+P L
Sbjct: 348 VPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLITRMQRPNRGLFGN 407
Query: 361 VQHYLSSLI 369
+ +SS++
Sbjct: 408 LLQNISSVL 416
>gi|116310926|emb|CAH67864.1| B0403H10-OSIGBa0105A11.16 [Oryza sativa Indica Group]
Length = 537
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/370 (59%), Positives = 296/370 (80%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ +QGKRLKF ++D + + +S +K + K MAAD+VS+GDSWL +AI+K L
Sbjct: 163 VEAQGKRLKFSPEFRTNLDVLYSEMSQCLDKGQLKQKSAMAADVVSIGDSWLGYAIRKGL 222
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
+EP+ AE+QDWF+ LS++WK++L RN GE+DP G IWA PYRWGT+VIAYKK+KF++H
Sbjct: 223 VEPVKNAEEQDWFQSLSNRWKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRH 282
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
NL PI+DW DLWRPELAG+ISMV+SPREVIG+VLK++G+SYN+N+++ ++ GG+ +V ++
Sbjct: 283 NLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLES 342
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L L NQ +LFDST+YLK+FG+GDVWVAVGWSSDV+PA KRMS+VAVVVPKSG+SLWADL
Sbjct: 343 LTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADL 402
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIP+A++ +T +IGGR RGPSPLI+QW +FCLQ+AR+LPF+Q+VIPGASP LE + +
Sbjct: 403 WAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPE 462
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P+E K KP +TNL+ G PP EIL +CEFLEPLSE L DY+WL+ +Q+P L
Sbjct: 463 VPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLITRMQRPNRGLFGN 522
Query: 361 VQHYLSSLIQ 370
+ +SS++
Sbjct: 523 LLQNISSVLN 532
>gi|218195504|gb|EEC77931.1| hypothetical protein OsI_17268 [Oryza sativa Indica Group]
gi|222629488|gb|EEE61620.1| hypothetical protein OsJ_16044 [Oryza sativa Japonica Group]
Length = 537
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/370 (59%), Positives = 296/370 (80%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ +QGKRLKF ++D + + +S +K + K MAAD+VS+GDSWL +AI+K L
Sbjct: 163 VEAQGKRLKFSPEFRTNLDVLYSEMSQCLDKGQLKQKSAMAADVVSIGDSWLGYAIRKGL 222
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
+EP+ AE+QDWF+ LS++WK++L RN GE+DP G IWA PYRWGT+VIAYKK+KF++H
Sbjct: 223 VEPVKNAEEQDWFQSLSNRWKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRH 282
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
NL PI+DW DLWRPELAG+ISMV+SPREVIG+VLK++G+SYN+N+++ ++ GG+ +V ++
Sbjct: 283 NLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLES 342
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L L NQ +LFDST+YLK+FG+GDVWVAVGWSSDV+PA KRMS+VAVVVPKSG+SLWADL
Sbjct: 343 LTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADL 402
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIP+A++ +T +IGGR RGPSPLI+QW +FCLQ+AR+LPF+Q+VIPGASP LE + +
Sbjct: 403 WAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPE 462
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P+E K KP +TNL+ G PP EIL +CEFLEPLSE L DY+WL+ +Q+P L
Sbjct: 463 VPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLITRMQRPNRGLFGN 522
Query: 361 VQHYLSSLIQ 370
+ +SS++
Sbjct: 523 LLQNISSVLN 532
>gi|226510377|ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea mays]
gi|219885513|gb|ACL53131.1| unknown [Zea mays]
gi|413919418|gb|AFW59350.1| putative putrescine-binding domain family protein [Zea mays]
Length = 530
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/369 (60%), Positives = 289/369 (78%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ +QGKRLKF L A++DGI + +S +K + + MAAD+VS+GDSWL +AI+K L
Sbjct: 156 VEAQGKRLKFSPELRANLDGIFSEMSQCMDKGQVQPKSAMAADVVSLGDSWLGYAIRKGL 215
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
+EPI AE+QDWF LS +WKV+L RN GE DP G IW PYRWGTMVIAYKK KF++H
Sbjct: 216 LEPIKNAEEQDWFHSLSDRWKVHLCRNQNGEADPNGTIWGVPYRWGTMVIAYKKDKFKRH 275
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
NL PI+DW+DLWRPELAGRISMV+SPREVIG+VLK++G+SYN+ ++++ V GG+ +V +
Sbjct: 276 NLKPIQDWEDLWRPELAGRISMVDSPREVIGAVLKHLGSSYNTVDMEMDVNGGRAAVLNS 335
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L Q +LFDS +YLK+F +GDVWVAVGWSSDV+PA KRMSNVAVVVPKSG+SLWADL
Sbjct: 336 FTQLQKQVQLFDSMNYLKSFSVGDVWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADL 395
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIP A+R +T QIG R RGPSPL+HQW +FCLQ+AR+LPF+Q+VIPGASP LE+ + +
Sbjct: 396 WAIPCATRFQTDQIGSRARGPSPLVHQWFDFCLQSARSLPFRQDVIPGASPLHLESPVPE 455
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P++ K KP DTNL+ GVPP EIL RCEFLEPLS L DY+WL++ +Q+P L
Sbjct: 456 VPQDKNKRKPKLDTNLVRGVPPPEILERCEFLEPLSGKALEDYQWLMSRVQRPRLGLFGN 515
Query: 361 VQHYLSSLI 369
+ +S+++
Sbjct: 516 MLQKMSAVL 524
>gi|357165613|ref|XP_003580439.1| PREDICTED: uncharacterized protein LOC100830894 [Brachypodium
distachyon]
Length = 526
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 219/369 (59%), Positives = 288/369 (78%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ +QG RLKF SID + LS K + +S MAAD+VS+GDSWL +AI+K L
Sbjct: 152 VEAQGNRLKFSPEFRTSIDTLFTELSQCVEKGEVQSKSAMAADVVSIGDSWLGYAIRKGL 211
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
+EPI AE+QDW++ LS +WKV+LRRN GE D G +W APYRWGT+VIAYKKSKF++H
Sbjct: 212 VEPIKNAEEQDWYRSLSDRWKVHLRRNQNGEADSNGSVWGAPYRWGTVVIAYKKSKFKQH 271
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
NL PI+DW+DLWRPELAG+ISMV+SPREVIG+VLK +G+SYN+ +++ +V+GG+ ++ +
Sbjct: 272 NLKPIQDWEDLWRPELAGKISMVDSPREVIGAVLKRLGSSYNTIDMETEVSGGREAILNS 331
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L Q +LFDS +YLK+FG+GDVWV VGWSSDV+PA KRMSNVAVVVPKSG+SLWADL
Sbjct: 332 FVQLQKQVQLFDSMNYLKSFGVGDVWVTVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADL 391
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIP A+R +T +IGGR RGPSPLIHQW +FCLQ+AR+LPF+QE+IPGASP LE +
Sbjct: 392 WAIPCATRFQTDRIGGRTRGPSPLIHQWFDFCLQSARSLPFRQEIIPGASPLFLENPAPE 451
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P+++ K KP +TNL+ GVPP EIL RCEFLEPL + L DY+WL++ +Q+P L+
Sbjct: 452 VPQDVNKRKPKLETNLVRGVPPPEILERCEFLEPLPDKVLGDYQWLMSRVQRPHGGLLGN 511
Query: 361 VQHYLSSLI 369
+ +S+++
Sbjct: 512 MLQKISNVL 520
>gi|242077052|ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
gi|241939645|gb|EES12790.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
Length = 531
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 285/366 (77%)
Query: 4 QGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEP 63
QGKRLKF L A++DGI + +S +K + + MAAD V++GDSWL +AI++ L+EP
Sbjct: 160 QGKRLKFSPELRANLDGIFSEMSQCMDKGQVQPKSAMAADAVTLGDSWLGYAIRQGLLEP 219
Query: 64 IAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLA 123
+ AE+QDWF+ LS +WKV+L RN GE DP G IW PYRWGTMVIAYKK+KF++HNL
Sbjct: 220 VKNAEEQDWFRSLSDRWKVHLCRNQNGEADPNGTIWGVPYRWGTMVIAYKKNKFKRHNLK 279
Query: 124 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 183
PI+DW+DLWRPELAGRISMV+SPRE+IG+VLK++G+SYN+ ++++ V GG+ +V +
Sbjct: 280 PIQDWEDLWRPELAGRISMVDSPREIIGAVLKHLGSSYNTVDMEIDVNGGREAVLNSFTQ 339
Query: 184 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 243
L Q +LFDS YLK+F +GDVWVAVGWSSDV+PA KRMSNVAVVVPKSG+S+WADLWAI
Sbjct: 340 LQKQVQLFDSMDYLKSFSVGDVWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSIWADLWAI 399
Query: 244 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
P A+R +T QIG R RGPSPLIHQW +FCLQ+AR+LPF+Q+VIPGASP LE + ++P+
Sbjct: 400 PCATRFQTDQIGSRTRGPSPLIHQWFDFCLQSARSLPFRQDVIPGASPLYLENPVPEVPQ 459
Query: 304 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKRVQH 363
+ K KP +TNL+ GVPP EIL RCEFLEPLS L DY+WL++ +Q+P V
Sbjct: 460 DKNKRKPKLETNLVRGVPPPEILERCEFLEPLSGKALEDYQWLMSKVQRPRLGFFGNVLQ 519
Query: 364 YLSSLI 369
+S+++
Sbjct: 520 KMSAVL 525
>gi|115460340|ref|NP_001053770.1| Os04g0602200 [Oryza sativa Japonica Group]
gi|113565341|dbj|BAF15684.1| Os04g0602200, partial [Oryza sativa Japonica Group]
Length = 367
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 215/362 (59%), Positives = 289/362 (79%)
Query: 9 KFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAE 68
KF ++D + + +S +K + K MAAD+VS+GDSWL +AI+K L+EP+ AE
Sbjct: 1 KFSPEFRTNLDVLYSEMSQCLDKGQLKQKSAMAADVVSIGDSWLGYAIRKGLVEPVKNAE 60
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDW 128
+QDWF+ LS++WK++L RN GE+DP G IWA PYRWGT+VIAYKK+KF++HNL PI+DW
Sbjct: 61 EQDWFQSLSNRWKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDW 120
Query: 129 KDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA 188
DLWRPELAG+ISMV+SPREVIG+VLK++G+SYN+N+++ ++ GG+ +V ++L L NQ
Sbjct: 121 GDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQV 180
Query: 189 RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+LFDST+YLK+FG+GDVWVAVGWSSDV+PA KRMS+VAVVVPKSG+SLWADLWAIP+A++
Sbjct: 181 QLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIPSATK 240
Query: 249 LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKG 308
+T +IGGR RGPSPLI+QW +FCLQ+AR+LPF+Q+VIPGASP LE + ++P+E K
Sbjct: 241 FQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQERNKR 300
Query: 309 KPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKRVQHYLSSL 368
KP +TNL+ G PP EIL +CEFLEPLSE L DY+WL+ +Q+P L + +SS+
Sbjct: 301 KPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLITRMQRPNRGLFGNLLQNISSV 360
Query: 369 IQ 370
+
Sbjct: 361 LN 362
>gi|326516630|dbj|BAJ92470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518394|dbj|BAJ88226.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519014|dbj|BAJ92667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520335|dbj|BAK07426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524998|dbj|BAK04435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/369 (58%), Positives = 286/369 (77%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ ++GKRLKF SID + + LS +K + + MAADLVS+GDSWL +AI+K L
Sbjct: 157 VEAEGKRLKFSPEFRPSIDALFSELSKCVDKGQVQPKSAMAADLVSIGDSWLGYAIRKGL 216
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
+EPI+ AE+QDW++ LS +WKV+L RN GE D G +W PYRWGT+VIAYKKSKF++H
Sbjct: 217 VEPISNAEEQDWYRSLSDRWKVHLCRNQNGEADSSGSVWGVPYRWGTVVIAYKKSKFKQH 276
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
NL PI+DW+DLWRPELAG+ISMV+SPREVIG+VLK +G+SYN+ +++ +V GG+ +V +
Sbjct: 277 NLKPIQDWEDLWRPELAGKISMVDSPREVIGAVLKQLGSSYNTIDMETEVNGGREAVLNS 336
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L Q +LFDS +YLK+FG+GDVWV VGWSSDV+PA KRMSNVAVVVPKSG+SLWADL
Sbjct: 337 FTQLQKQVQLFDSMNYLKSFGVGDVWVTVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADL 396
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIP A+R +T +IGGR RGPSPLIHQW +FCLQ+AR+LPF+QE+IPGASP LE
Sbjct: 397 WAIPCATRFQTDRIGGRTRGPSPLIHQWFDFCLQSARSLPFRQEIIPGASPLFLEHPAPD 456
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPAPVLMKR 360
+P++ K +P +TNL+ GVPP EIL +CEFLEPLS+ + DY+WL++ +Q+P L
Sbjct: 457 VPQDRNKKQPKLETNLVRGVPPPEILEKCEFLEPLSDKAVGDYQWLMSRVQRPRSGLFGN 516
Query: 361 VQHYLSSLI 369
V +S+++
Sbjct: 517 VLQRISTVL 525
>gi|168015953|ref|XP_001760514.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688211|gb|EDQ74589.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 438
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 178/362 (49%), Positives = 242/362 (66%), Gaps = 14/362 (3%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
+ SQGK K S+ I+ L+V + MAADLV+VGDSWL+ A++ L
Sbjct: 43 LMSQGKNAKLSAEFKGSLSDILAELAVSMENSQITPKSAMAADLVTVGDSWLATAVQGGL 102
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
++PI AE DWF L KW+ ++RR+ G I+P+G +W PYRWG++V A+KK K ++
Sbjct: 103 LDPIRNAEQFDWFNRLHPKWQNFIRRDPEGIINPQGLVWGVPYRWGSLVFAFKKDKLERN 162
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
++PI DWKDL++P+LAGRI+MV+SPREV+G+VLK +GASYN+N+ D V GG+ +V++
Sbjct: 163 GISPIRDWKDLFQPQLAGRIAMVDSPREVVGAVLKSLGASYNTNDFDADVPGGREAVKER 222
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L Q RLFD YLKA GDVWVAVGWSSD++P KR SN++V P+SG SLWADL
Sbjct: 223 FLALQKQVRLFDDNDYLKAMSAGDVWVAVGWSSDIIPYSKRASNISVYAPESGTSLWADL 282
Query: 241 WAIPAASRLE-TKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP-------- 291
WAIPA + E + +GGRVRGPSPL+ QW++FCLQ ARA F +V GASP
Sbjct: 283 WAIPATTTFEKAENVGGRVRGPSPLVFQWLDFCLQPARATTFANDVFVGASPLTWSEKSE 342
Query: 292 -SALETTLVKLPEELLKGKP----SQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 346
E T ++ KP + D+N++ G+PP EI+A+ EFLEPLS+ LSDY+WL
Sbjct: 343 TEISENTFLETGASQSGKKPKTVVTLDSNIVQGMPPDEIVAKSEFLEPLSDKALSDYQWL 402
Query: 347 VA 348
++
Sbjct: 403 LS 404
>gi|302820071|ref|XP_002991704.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
gi|300140553|gb|EFJ07275.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
Length = 387
Score = 361 bits (926), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 231/347 (66%), Gaps = 3/347 (0%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
M SQGK++K S+D I L N + S MAAD+V++GDSWL AI+ +L
Sbjct: 41 MVSQGKQMKLGAEFLGSLDTIYTQLVSAKNSGQLTSKSTMAADVVTLGDSWLGVAIRNKL 100
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
I + ++ +WF+ L KW+ LRR+ G D G++W APYR G MVIAY+K K K
Sbjct: 101 IASVGKPQELEWFQHLDPKWQAILRRDAQGRPDETGQVWGAPYRCGCMVIAYRKDKLAKA 160
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
L I+DW DLW+PELAGRISM+ S REV+G VLK +GASYN+ N+D +V GG+ +V++
Sbjct: 161 GLQDIKDWDDLWKPELAGRISMIESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKER 220
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L QA +FD+ +YL+A G GDVW+AVGWS+DVLP KR SNV V+ P SG SLWAD+
Sbjct: 221 FLRLRKQA-MFDNINYLRALGAGDVWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADV 279
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIPAA ++++ + GGR+RGPSPL+ QW+EFCLQ AR+L F QE GASP
Sbjct: 280 WAIPAAIKIKSDKAGGRIRGPSPLVSQWLEFCLQPARSLAFHQEAFCGASPLRFADVADN 339
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 347
E P DTNL+ G+PP +IL + EFLEPL E TL+ Y WL+
Sbjct: 340 GSSE--PAGPRLDTNLVSGLPPKDILGKSEFLEPLEEETLAKYRWLL 384
>gi|302818713|ref|XP_002991029.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
gi|300141123|gb|EFJ07837.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
Length = 387
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 175/347 (50%), Positives = 231/347 (66%), Gaps = 3/347 (0%)
Query: 1 MRSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRL 60
M SQGK++K S+D I L N + S MAAD+V++GDSWL AI+ +L
Sbjct: 41 MVSQGKQMKLGAEFLGSLDTIYTQLVSAKNSGQLTSKSTMAADVVTLGDSWLGAAIRNKL 100
Query: 61 IEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
I + ++ +WF+ L KW+ LRR+ G D G++W APYR G MVIAY+K K K
Sbjct: 101 IASVGKPQELEWFQHLDPKWQAILRRDAQGRPDETGQVWGAPYRCGCMVIAYRKDKLAKA 160
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
L I+DW DLW+PELAG+ISM+ S REV+G VLK +GASYN+ N+D +V GG+ +V++
Sbjct: 161 GLQDIKDWDDLWKPELAGKISMIESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKER 220
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
L QA +F++ +YL+A G GDVW+AVGWS+DVLP KR SNV V+ P SG SLWAD+
Sbjct: 221 FLRLRKQA-MFENINYLRALGAGDVWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADV 279
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
WAIPAA+ +++ + GGR+RGPSPL+ QW+EFCLQ AR+L F QE GASP
Sbjct: 280 WAIPAATTIKSDKAGGRIRGPSPLVSQWLEFCLQPARSLAFHQEAFCGASPLRFADVADN 339
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 347
E P DTNL+ G+PP +IL + EFLEPL E TL+ Y WL+
Sbjct: 340 GSSE--PAGPRLDTNLVSGLPPKDILGKSEFLEPLEEETLAKYRWLL 384
>gi|113476419|ref|YP_722480.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
gi|110167467|gb|ABG52007.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
Length = 382
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 186/321 (57%), Gaps = 40/321 (12%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
A+LV++GD WL+ AIK+ LI+P +W K L KW ++RN+ G +DP+GKIWAA
Sbjct: 95 ANLVTLGDYWLANAIKQELIQPFNSQSLANWNK-LPEKWLELVKRNNQGYVDPQGKIWAA 153
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PY+WGT +IAY+ KF+ P +DW DLWRPEL G IS++N REVIG LK +G SY
Sbjct: 154 PYQWGTTLIAYRVDKFKALGWEP-KDWSDLWRPELKGNISLLNQAREVIGLTLKKLGKSY 212
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ NID QV ++ L L Q + + S +YL+ IGD W+AVGWS+D+LP +K+
Sbjct: 213 NTKNID-QVE----KLKAELVKLNQQVKFYSSNNYLQPLIIGDTWLAVGWSNDILPLLKK 267
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL--QTARAL 279
+A VVP+SG +LWA+LW PAAS + L +WI FC Q A+ +
Sbjct: 268 RKKIAAVVPQSGTALWANLWVKPAAS------------PENSLTEKWINFCWQPQVAQQM 315
Query: 280 PFKQE----VIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
+ ++P +P+ L + + P LL P EI+ + EFL PL
Sbjct: 316 SIITQTSSPIMPKINPNELISDIKNNPLLLL---------------PQEIIEKSEFLAPL 360
Query: 336 SEATLSDYEWLVADLQKPAPV 356
+ +T+ Y+ L ++++P +
Sbjct: 361 ANSTIEQYQKLWQEIRQPVHI 381
>gi|428211975|ref|YP_007085119.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|428000356|gb|AFY81199.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 417
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 179/322 (55%), Gaps = 23/322 (7%)
Query: 24 NLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVY 83
NL +P+ + + P ADLV++G+ WL AI + LI P+ W L +W+
Sbjct: 109 NLPLPW--INRDAGPSNLADLVTLGNYWLERAIAQELILPLDPTPLDQW-DNLPSQWQTL 165
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
+RRN G++DP G++W APYRWGT VIAY+ +FR P +DW DLWRPEL R+S++
Sbjct: 166 VRRNAEGQLDPEGQVWGAPYRWGTTVIAYRVDRFRNLGWTP-QDWSDLWRPELRDRLSLL 224
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
+SPREVIG LK +G SYN + +D +Q+ L L QARL+ S YL+ +G
Sbjct: 225 DSPREVIGLTLKTLGHSYNRDRLD-----DLPELQEQLLALHRQARLYSSDAYLQPLLLG 279
Query: 204 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGP-S 262
D WVAVGWS+D+L ++R + VVP SG +LW++LW PA + P S
Sbjct: 280 DTWVAVGWSTDILATMQRNPQIRAVVPPSGTALWSELWVRPAGP----NPVNPETPTPAS 335
Query: 263 PLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPP 322
L +QWI FC A+ Q + ASP L +LP L TN I+ +P
Sbjct: 336 SLANQWINFCWNPEMAVQLSQ-LSKAASPMLLNRDRGELPNAL-------QTNGIL-LPT 386
Query: 323 AEILARCEFLEPLSEATLSDYE 344
AE +A EF+EPL+ YE
Sbjct: 387 AEAIANSEFIEPLTPEIAETYE 408
>gi|428304513|ref|YP_007141338.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428246048|gb|AFZ11828.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 391
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/323 (38%), Positives = 191/323 (59%), Gaps = 27/323 (8%)
Query: 23 NNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKV 82
N L +PF K P DLV++GD WL AI+++LI+PIA + ++W + + +W+
Sbjct: 84 NKLKIPFLSPKQPEIP----DLVTLGDYWLESAIQQQLIQPIALDKLKNW-QQMPKQWQE 138
Query: 83 YLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISM 142
++RN+ G++D GKIW APYRWG+ VIAY+K KF+ P +W DLWR E GRIS+
Sbjct: 139 LVQRNEQGQLDAAGKIWGAPYRWGSTVIAYRKDKFKSLGWTPT-NWSDLWREECKGRISL 197
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
++ PRE+IG LK++G SYN+ N+D ++ K ++++ L +L+ S YL+ +
Sbjct: 198 LDQPREIIGLTLKHLGYSYNTTNLD-EIKNLKDALKK----LHQNVKLYSSDTYLQPLIL 252
Query: 203 GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS 262
GD W+AVGWS+DVL A+K +A VVP+SG +LWAD+W P +L +
Sbjct: 253 GDTWLAVGWSTDVLKAIKSEPKIAAVVPQSGTALWADVWVRP---KLASANSTSDTPNLQ 309
Query: 263 PLIHQWIEFCLQ--TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
L QWI+FC Q +A A+ E + SP + +P++L+K + + +
Sbjct: 310 TLADQWIDFCWQPKSASAISIFTEAV---SPVLINMDGNDIPKDLVKNQ--------LLL 358
Query: 321 PPAEILARCEFLEPLSEATLSDY 343
P +I+ + EFL PLS+AT Y
Sbjct: 359 PNKQIIQKSEFLHPLSKATEQQY 381
>gi|434405536|ref|YP_007148421.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428259791|gb|AFZ25741.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 382
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 182/310 (58%), Gaps = 30/310 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
ADLV++GD WL AI+++LI+P+ + + W L KW+ ++R+D G ++P+GK+W A
Sbjct: 102 ADLVTLGDYWLKAAIEQKLIQPLEVEQVKQW-SVLDQKWQKLVQRDDLGNLNPQGKVWGA 160
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG+ VI Y + KF K + P DW DLWR EL RIS++N PREVIG VLK +G SY
Sbjct: 161 PYRWGSTVIVYNREKFEKLDWRP-RDWNDLWRDELQQRISLLNQPREVIGLVLKKLGKSY 219
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ N+D Q+ +Q L L Q + + S +YL+ IGD W+AVGWSSD++P + R
Sbjct: 220 NTENLD-QIP----ELQTELQKLNQQVKFYSSNNYLEPLIIGDTWLAVGWSSDIVPLLGR 274
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ VV+P+SG ++WADLW P G + L +QWI+FC Q A
Sbjct: 275 YPQLTVVIPQSGTAIWADLWVRPTGV------------GKASLPYQWIDFCWQPNIA--- 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
KQ + S S + T +V + +P Q NL++ P +I + EFL PLS +
Sbjct: 320 KQISLLTKSNSPISTNIVASDIQ----EPLQ--NLLLTNP--QIFQKSEFLLPLSLSATK 371
Query: 342 DYEWLVADLQ 351
YE L + L+
Sbjct: 372 QYESLFSKLK 381
>gi|428223996|ref|YP_007108093.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427983897|gb|AFY65041.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 388
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 177/302 (58%), Gaps = 24/302 (7%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
A+LV++GD+WL AI++ LI+P+ Q+W + W+ +RN+ G + P G +W A
Sbjct: 101 ANLVTLGDAWLQPAIQQGLIQPLRPETWQNW-ASIPEAWRRISQRNEQGLVSPAGSVWGA 159
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWGT VIAY+K KF ++ L P +DW DLW+P L GR+S+++ REVIG VLK +G SY
Sbjct: 160 PYRWGTTVIAYRKDKFERNGLRPPQDWADLWQPGLRGRLSLLDQEREVIGLVLKKLGQSY 219
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N D G + ++ L Q + ++ST YL+ +GD W AVGWS+DVLP ++
Sbjct: 220 NV--ADPTTVTGLVEEARS---LHQQVKFYNSTAYLEPLLLGDTWAAVGWSTDVLPLLES 274
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
++AVVVP+SG +LWAD+W AA E Q L+++WI+FC A A F
Sbjct: 275 QRHLAVVVPQSGTALWADVWVQAAAPASEAVQ---------DLMNEWIDFCWNPAIAGQF 325
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
V SP LP+ L QD +++ +PP E+L RCEFLEPL EA
Sbjct: 326 SL-VSRAVSPIVPSLDRSTLPQSL------QDNSIL--LPPPEVLERCEFLEPLPEAAKQ 376
Query: 342 DY 343
Y
Sbjct: 377 TY 378
>gi|427734714|ref|YP_007054258.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427369755|gb|AFY53711.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 388
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 202/354 (57%), Gaps = 35/354 (9%)
Query: 1 MRSQGKRLK-FQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKR 59
+R K+L+ Q N A + ++S F K AK+ DL+++GD WL AI+K
Sbjct: 65 LRQLFKQLRSLQKNEAAQKESEGFDISGLFGKSPAKNI-----DLLTLGDFWLQEAIEKE 119
Query: 60 LIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK 119
LI+ ++ + Q+W LS KW+ + RN+ G +D +G+IWAAPYRWG+ VI Y+K K +K
Sbjct: 120 LIQSLSREDLQNW-SNLSPKWQDLVTRNNQGLVDKQGQIWAAPYRWGSTVIIYRKDKLKK 178
Query: 120 HNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 179
+ IEDW DLWR EL GRIS++N PREVIG LK +G SYNS N+ S+++
Sbjct: 179 FDWK-IEDWSDLWREELKGRISLLNQPREVIGLTLKKLGKSYNSENLQ-----SIKSLKE 232
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 239
L +L Q + ++ST+Y++ +GD W+AVGWS+D++ V R + VVVP SG +LWAD
Sbjct: 233 ELQVLNQQVKFYNSTNYIEPLILGDTWLAVGWSNDIVSLVSRYPQLGVVVPNSGTALWAD 292
Query: 240 LWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL--QTARALPFKQEVIPGASPSALETT 297
LW P + G + L ++WI+FC Q A+ + + SP E
Sbjct: 293 LWVQPKVT-------GKKDETQESLSNKWIDFCWKPQIAKQIAV---LTKANSPIDTEIP 342
Query: 298 LVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 351
++P KP Q NL+ P E+ + EFL PLS + + +Y+ L +++
Sbjct: 343 ASEIP------KPLQ--NLLSANP--EVFEKSEFLLPLSSSAVKEYDSLFREMK 386
>gi|434391078|ref|YP_007126025.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
gi|428262919|gb|AFZ28865.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
Length = 378
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 175/305 (57%), Gaps = 36/305 (11%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+ L+++GD WLS AI+++LI+P+ + Q+W L +W+ +RRN+ GE DP+G+IWAA
Sbjct: 98 STLITLGDYWLSTAIQQQLIQPLNITQLQNW-NALPSRWQELVRRNNQGESDPQGQIWAA 156
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG+ VI Y + KF P DW DLWRPEL RIS+V+ REVIG LK +G SY
Sbjct: 157 PYRWGSTVILYNREKFNSLGWTP-NDWSDLWRPELRSRISIVDQSREVIGLTLKRLGQSY 215
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ N+D Q+ ++++ L L Q RL+ S Y++ IGD WVAVGWS+DVLP ++R
Sbjct: 216 NAQNLD-QIP----NLEEQLQALHQQVRLYSSNRYIEPLIIGDTWVAVGWSTDVLPILRR 270
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL--QTARAL 279
+AVVVP+SG +LWAD+W P + L T L QWI+FC Q A+ +
Sbjct: 271 YREIAVVVPRSGTALWADVWVNPINAALPT------------LASQWIDFCWQPQIAQQI 318
Query: 280 PFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT 339
+ G SP A V+LP P+ N L + EFL PLS
Sbjct: 319 SLRTH---GTSPIA-----VQLP-------PASGQNPTRIEFTDAQLQQSEFLLPLSATA 363
Query: 340 LSDYE 344
YE
Sbjct: 364 QHQYE 368
>gi|209522903|ref|ZP_03271460.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|376001837|ref|ZP_09779691.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|423062300|ref|ZP_17051090.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209496490|gb|EDZ96788.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|375329748|emb|CCE15444.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|406716208|gb|EKD11359.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 371
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 188/324 (58%), Gaps = 31/324 (9%)
Query: 24 NLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVY 83
NL + +++A+ A ADLV +GD WLS AI++ LIEP+ ED ++ L W+
Sbjct: 64 NLEDLYQELQAE-ATSNPADLVMIGDYWLSAAIREELIEPL-NPEDLSQWQQLPENWQNL 121
Query: 84 LRRNDAGEID--PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 141
+RRN GE+ P G+IW APYRWGT IAY+ +F K P DW+DLWR E GRIS
Sbjct: 122 VRRNPNGELSNSPEGQIWGAPYRWGTTAIAYRVDRFEKLGWTPT-DWQDLWRSECQGRIS 180
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
+++ REVIG LK +G SYN+ ++DL V K ++Q L RL+DS +YLK
Sbjct: 181 LLDQAREVIGLTLKKLGYSYNTPDLDL-VPDLKAELEQ----LHQNVRLYDSNNYLKPLI 235
Query: 202 IGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGP 261
+GD W+AVGWS D+ P V+R N+A+ +PKSG +LW+D+W P A+
Sbjct: 236 LGDTWLAVGWSGDISPQVQRQHNIAIAIPKSGTALWSDVWVKPIATSATN---------- 285
Query: 262 SPLIHQWIEFCLQTARALPFKQEVIPGA-SPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
+PL+ WI+FC Q A + ++ GA SP + LP++L ++ L+
Sbjct: 286 NPLVQAWIDFCWQPEIAT--QMSLLTGATSPIVWGMSRADLPKDL-----RENPQLL--- 335
Query: 321 PPAEILARCEFLEPLSEATLSDYE 344
P +IL R EFL PL+ A++ Y+
Sbjct: 336 PDTDILERSEFLLPLTVASMQQYQ 359
>gi|334121096|ref|ZP_08495171.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333455585|gb|EGK84231.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 369
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 187/311 (60%), Gaps = 28/311 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
A+LV +GD WL+ AI+++LI+PI A+ +W + L +W+ +RRND G++DP+GK+WAA
Sbjct: 83 ANLVMLGDYWLTLAIRQKLIKPIDPAKFANWPQ-LPERWQKLVRRNDEGKLDPQGKVWAA 141
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG+ VIAY+ KF+ P DWKDLWR EL RIS+ +S REVIG LK +G SY
Sbjct: 142 PYRWGSTVIAYRTDKFKALGWTPT-DWKDLWRSELRDRISLPDSAREVIGLTLKKLGKSY 200
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ +D QV +V++ L L Q +L+ S YL+ +GD W+AVG S D+LP ++
Sbjct: 201 NTQQLD-QVP----NVKKELENLHQQVKLYSSDAYLQPLILGDTWLAVGSSGDLLPLLQT 255
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
++A+V+P SG +LW DLW PA+ P L+ +WI+FCLQ R P
Sbjct: 256 QKDIALVIPVSGTALWTDLWVEPASG------------NPVSLVEEWIDFCLQ-PRVAPQ 302
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
+ +SP + LPE + TN ++ +P A+ILA +FL P +A ++
Sbjct: 303 LSLLAKASSPIIIGMKPEDLPEAV-------RTNSVL-LPDAKILAASDFLLPFGDAGIA 354
Query: 342 DYEWLVADLQK 352
Y L ++++
Sbjct: 355 QYRSLWQEIRQ 365
>gi|428317919|ref|YP_007115801.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428241599|gb|AFZ07385.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 369
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 182/303 (60%), Gaps = 28/303 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
ADLV +GD WL+ AI+++LI+PI A+ +W + L +W+ +RRND G++DP+GK+WAA
Sbjct: 83 ADLVMLGDYWLTLAIRQKLIQPIDPAKFANWSQ-LPERWQKLVRRNDEGKLDPQGKVWAA 141
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG+ VIAY+ KF+ P DWKDLWR EL RIS+ +S REVIG LK +G SY
Sbjct: 142 PYRWGSTVIAYRTDKFKALGWTPT-DWKDLWRSELRDRISLPDSAREVIGLTLKKLGKSY 200
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ +D +V ++++ LA L Q + + S YL+ +GD W+AVG S D+LP ++
Sbjct: 201 NTQQLD-RVP----NLKKELANLHRQVKFYSSDAYLQPLILGDTWLAVGSSGDLLPLLQT 255
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
++A+V+P SG +LW DLW PA+ P L+ +WI+FCLQ R P
Sbjct: 256 QKDIALVIPVSGTALWTDLWVEPASG------------NPVSLVDKWIDFCLQ-PRIAPQ 302
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
+ +SP + LPE + TN ++ +P A+ILA +FL P +A ++
Sbjct: 303 LSLLAKASSPIIVGMKPEDLPEAV-------RTNSVL-LPDAKILAASDFLLPFGDAGIA 354
Query: 342 DYE 344
Y
Sbjct: 355 QYR 357
>gi|300869610|ref|ZP_07114190.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
gi|300332388|emb|CBN59390.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
Length = 349
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 176/302 (58%), Gaps = 25/302 (8%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
ADLV +GD WL+ AI+++LI+P+ A+ +W + L W+ +RRND+G D +GKIWAA
Sbjct: 60 ADLVMIGDYWLAKAIQQKLIQPLDPAKLTNWSQ-LPPAWQTLVRRNDSGIADEKGKIWAA 118
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWGT VI Y+ KF+ L P DW DLWR EL RIS++++PREVIG LK +G SY
Sbjct: 119 PYRWGTTVIVYRIDKFKSLGLKPPTDWSDLWREELRDRISLLDNPREVIGLTLKKLGKSY 178
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ +++ +VA ++++ L+ L Q +L+ S YL+ +GD W AVGWS DVL ++
Sbjct: 179 NTRDLN-KVA----NLKEELSNLHRQTKLYSSNSYLQPLVLGDTWAAVGWSGDVLRLMQN 233
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ VVP SG S+W DLW P +++ L+ QWI+FC Q A
Sbjct: 234 QKEIGAVVPISGTSMWVDLWVQPVSNQSSNLS----------LVEQWIDFCWQPQIATQM 283
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
+ +SP + LPE+L + + +P +E++++ EFL PL + +
Sbjct: 284 SL-LTQASSPVIISMKREDLPEQLRINR--------LLLPESEVISKSEFLFPLPDVAIE 334
Query: 342 DY 343
Y
Sbjct: 335 QY 336
>gi|422303925|ref|ZP_16391274.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
gi|389791060|emb|CCI13120.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
Length = 382
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/320 (39%), Positives = 182/320 (56%), Gaps = 34/320 (10%)
Query: 27 VPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRR 86
+PF + K +LV++GD+WL I LI+P+ ++ +W K L +W+ + R
Sbjct: 89 IPFREQKP-----AIGNLVTLGDAWLGKVITNGLIQPLDTSQLSNWSK-LPPRWQENMTR 142
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSP 146
N G+ GK+WAAPYRWG VIAY + KF + + P +DW DLWRPEL+G+I+++++
Sbjct: 143 NAQGQPQTEGKVWAAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELSGKIALIDNR 201
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
REVIG LK +G SYNS+N+ QV S++ L L Q R + S HYL+ +GDVW
Sbjct: 202 REVIGLTLKKLGYSYNSSNLK-QVT----SLKDQLFALQKQVRFYSSQHYLQPLILGDVW 256
Query: 207 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIH 266
++VGWS+D+LP R + + VVVPKSG SLW+D+W P + P+ L+
Sbjct: 257 LSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLVD 304
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
QWI FC Q+ A G SP L ++P + +K P L+V E +
Sbjct: 305 QWINFCWQSESATKISL-FTSGLSPLILTQNPDQIPPD-IKNNP-----LLVN---PEAV 354
Query: 327 ARCEFLEPLSEATLSDYEWL 346
+ +FL PLS AT +YE L
Sbjct: 355 KKSDFLNPLSPATEQEYEQL 374
>gi|425459716|ref|ZP_18839202.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
gi|389827779|emb|CCI20808.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
Length = 382
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 178/305 (58%), Gaps = 29/305 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+LV++GD+WL AI LI+P+ ++ +W K L +W+ + RN G+++ GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGA 157
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
NS+++ QV G ++ L L Q R + S HYL+ +GDVW++VGWS+D+LP R
Sbjct: 217 NSSDLK-QVTG----LKDQLFALQKQVRFYSSQHYLQPLILGDVWLSVGWSNDILPVSDR 271
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ + VVVPKSG SLW+D+W P + P+ L+ QWI+FC Q A
Sbjct: 272 YNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESANKI 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
G SP L ++P ++ ++ L+V E + + +FL PLS AT
Sbjct: 320 SL-FTSGLSPLILTENPDQIPPDI------RNNPLLVN---PEAVKKSDFLNPLSPATEQ 369
Query: 342 DYEWL 346
+YE L
Sbjct: 370 EYEQL 374
>gi|443657684|ref|ZP_21131934.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
gi|159027984|emb|CAO87944.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333157|gb|ELS47731.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
Length = 382
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 178/305 (58%), Gaps = 29/305 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+LV++GD+WL AI LI+P+ ++ +W K L +W+ + RN G++ GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLQTEGKVWGA 157
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N++++ QV G ++ L L Q R + S +YL+ +GDVW++VGWS+D+LP R
Sbjct: 217 NASDLK-QVTG----LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDR 271
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ + VVVPKSG SLW+D+W P + P+ L+ QWI+FC Q A
Sbjct: 272 YNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESATKI 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
G SP L L ++P + +K P L+V E + + +FL PLS AT
Sbjct: 320 SL-FTSGLSPLILTENLDQIPPD-IKNNP-----LLVN---PEAVKKSDFLNPLSPATEQ 369
Query: 342 DYEWL 346
+YE L
Sbjct: 370 EYEQL 374
>gi|427731993|ref|YP_007078230.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427367912|gb|AFY50633.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 382
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 187/325 (57%), Gaps = 33/325 (10%)
Query: 27 VPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRR 86
+PF + ++ + A+LV++GD WL I++RLI+P+ A+ + W + L +W+ +RR
Sbjct: 90 IPFRQSQSSAV----ANLVTLGDYWLKTVIEQRLIQPLEPAQLKQWTE-LDARWQQLVRR 144
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSP 146
ND G DP+GK+WAAPYRWG+ VI Y + KF+ P +DW DLWR E+ R S+++ P
Sbjct: 145 NDQGFPDPQGKVWAAPYRWGSTVIVYNQDKFKDLGWMP-QDWSDLWREEMRSRFSLLDHP 203
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
REVIG VLK +G SYN+ N+D ++Q L L QA+ + S YL+ IGD W
Sbjct: 204 REVIGLVLKKLGKSYNTENLD-----AVPQLEQELRTLNQQAKFYSSNTYLQPLIIGDTW 258
Query: 207 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIH 266
+AVGWS+DV+P + R + +++P+SG ++WADLW P + + L
Sbjct: 259 LAVGWSNDVVPILSRYPQMKMIIPRSGTAIWADLWVSPKGANQDDN-----------LSS 307
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
QWI+FC Q A KQ V+ S S + T + ++ ++G + +L++ E+
Sbjct: 308 QWIDFCWQPNIA---KQIVVRTKSNSPIPTNIA---DDDIQGSFA---SLLLN--NQEVF 356
Query: 327 ARCEFLEPLSEATLSDYEWLVADLQ 351
+ EFL PL T YE L +++
Sbjct: 357 DKSEFLLPLQLTTAKQYESLFNNIK 381
>gi|440681216|ref|YP_007156011.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428678335|gb|AFZ57101.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 383
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 178/318 (55%), Gaps = 34/318 (10%)
Query: 27 VPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRR 86
+PFN+ + S +DLV++GD WL AI+++LI+P+ + + W L KW+ + R
Sbjct: 90 IPFNQSQTTSK----SDLVTLGDYWLKAAIEQKLIQPLQTEKIKQW-PVLEQKWQQLVTR 144
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSP 146
+ G ++P+G++W APYRWG VI Y + KF+K + P +DW DLWR EL IS++N P
Sbjct: 145 DKQGNVNPQGQVWGAPYRWGNTVIVYNREKFQKLDWQP-KDWSDLWRSELRSHISLLNHP 203
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
RE+IG VLK +G SYN+ N+D Q+ S++ L L Q + +DST YL+ GD W
Sbjct: 204 REIIGLVLKKLGQSYNTENLD-QIP----SLEAELKALNQQVKFYDSTTYLEPLITGDTW 258
Query: 207 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIH 266
+AVGWS+DV+P + R + V+P+SG ++WADLW PA + R L
Sbjct: 259 LAVGWSNDVIPLLSRYPKLTAVIPQSGTAIWADLWVSPAG-------VDKRA-----LAS 306
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
QWI+FC Q A + SP A + ++L NL++ P E+
Sbjct: 307 QWIDFCWQPNIAKKIA-VLTKTNSPIAKNIVAADIQKQL--------ENLLLTNP--EVF 355
Query: 327 ARCEFLEPLSEATLSDYE 344
+ EFL PLS A YE
Sbjct: 356 DKSEFLLPLSPAATKQYE 373
>gi|166363771|ref|YP_001656044.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
gi|166086144|dbj|BAG00852.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
Length = 382
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 185/323 (57%), Gaps = 34/323 (10%)
Query: 24 NLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVY 83
++S+PF + P M +LV++GD+WL AI LI+P+ ++ +W K L +W+
Sbjct: 86 SISIPFRE----QNPAMG-NLVTLGDAWLGKAITNGLIQPLDTSQLSNWSK-LPPRWQEN 139
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
+ RN G+ GK+W APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MTRNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
++ REVIG LK MG SYNS+++ QV G ++ L L Q + + S HYL+ +G
Sbjct: 199 DNRREVIGLTLKKMGYSYNSSDLK-QVMG----LKDQLFALQKQVKFYSSQHYLQPLILG 253
Query: 204 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP 263
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P + P+
Sbjct: 254 DVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNS 301
Query: 264 LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPA 323
L+ QWI+FC Q A G SP L + P+++ P N ++ P
Sbjct: 302 LVEQWIDFCWQPESATKISL-FTSGLSP----LILTQNPDQI---SPDIRNNPLLVNP-- 351
Query: 324 EILARCEFLEPLSEATLSDYEWL 346
E + + +FL PLS AT +YE L
Sbjct: 352 EAIKKSDFLNPLSPATEQEYEQL 374
>gi|75909270|ref|YP_323566.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
gi|75702995|gb|ABA22671.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
Length = 388
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 181/327 (55%), Gaps = 38/327 (11%)
Query: 27 VPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRR 86
+PF + S + ADLV++GD WL+ AI+++LI+PI A+ + W L +W+ + R
Sbjct: 97 IPFRQ----SQTFPLADLVTLGDYWLTTAIERKLIQPIETAQLKQW-SGLDSRWRELVTR 151
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSP 146
N+ G DP+GK+WAAPYRWG+ VI Y + KF+K P +DW DLWR EL RIS+++ P
Sbjct: 152 NEQGIPDPQGKVWAAPYRWGSTVIVYDREKFKKLGWTP-QDWSDLWRNELRSRISLLDQP 210
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
REVIG VLK +G SYN N+ +++ L L Q + + S YL+ IGD W
Sbjct: 211 REVIGLVLKKLGKSYNIENL-----ATVPDLEKELQTLNQQVKFYSSNTYLEPLIIGDTW 265
Query: 207 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIH 266
+AVGWSSDV+P + R +++V+P+SG S+WADLW P K+I L
Sbjct: 266 LAVGWSSDVIPVLARYPQLSLVIPRSGTSIWADLWVSP-------KEITQ-----DALSS 313
Query: 267 QWIEFCLQ--TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE 324
QWI+FCLQ AR + + SP + E L +L++ E
Sbjct: 314 QWIDFCLQPNIARQIAL---LTKTNSPVVTNIGTADIQESL--------GSLLLN--SQE 360
Query: 325 ILARCEFLEPLSEATLSDYEWLVADLQ 351
+ A+ EFL PL YE L A ++
Sbjct: 361 VFAKGEFLLPLPPEATKQYEALFAKIK 387
>gi|425434255|ref|ZP_18814726.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
gi|389676326|emb|CCH94643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
Length = 382
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 177/305 (58%), Gaps = 29/305 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+LV++GD+WL AI LI+P+ ++ +W K L +W+ + RN G+++ GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGA 157
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N +++ QV G ++ L L Q R + S HYL+ +GDVW++VGWS+D+LP R
Sbjct: 217 NYSDLK-QVTG----LKDQLFALQKQVRFYSSQHYLQPLILGDVWLSVGWSNDILPVSDR 271
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ + VVVPKSG SLW+D+W P + P+ L+ QWI+FC Q A
Sbjct: 272 HNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESANKI 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
G SP L ++P ++ ++ L+V E + + +FL PLS AT
Sbjct: 320 SL-FTSGLSPLILTENPDQIPPDI------RNNPLLVN---PEAVKKSDFLNPLSPATEQ 369
Query: 342 DYEWL 346
+YE L
Sbjct: 370 EYEQL 374
>gi|409993345|ref|ZP_11276490.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
gi|291567216|dbj|BAI89488.1| putative ABC transporter substrate-binding protein [Arthrospira
platensis NIES-39]
gi|409935824|gb|EKN77343.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
Length = 389
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 184/324 (56%), Gaps = 31/324 (9%)
Query: 24 NLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVY 83
NL + +++A+ A +A LV +GD WLS AI++ LIEP+ ED ++ L W+
Sbjct: 82 NLEDLYQQLQAE-AISNSALLVMIGDYWLSAAIREELIEPL-NPEDLSQWQQLPQNWQNL 139
Query: 84 LRRNDAGEIDP--RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 141
+RRN GE+ G IW APYRWGT IAY+ KF K P DW+DLWR E GRIS
Sbjct: 140 VRRNQNGELSDSLEGNIWGAPYRWGTTAIAYRVDKFEKLGWTPT-DWEDLWRSECKGRIS 198
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
++N REVIG LK +G SYN+ ++DL V K ++Q L RL+DS +YLK
Sbjct: 199 LLNQGREVIGLTLKKLGYSYNTPDLDL-VPDLKAQLEQ----LHQNVRLYDSDNYLKPLI 253
Query: 202 IGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGP 261
+GD W+AVGWS D+ P ++R N+A+ +PKSG +LW+D+W P A+
Sbjct: 254 LGDTWLAVGWSGDISPQLQRQHNIAIAIPKSGTALWSDVWVKPKATSATN---------- 303
Query: 262 SPLIHQWIEFCLQTARALPFKQEVIPGA-SPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
+PL+ WI+FC Q A + ++ GA SP LP++ L+ P +
Sbjct: 304 NPLVQAWIDFCWQPEIAT--QMSLLTGATSPIVWGMPRADLPKD-LRENPQL-------L 353
Query: 321 PPAEILARCEFLEPLSEATLSDYE 344
P +IL R EFL PL+ A++ Y+
Sbjct: 354 PDTDILDRSEFLLPLTVASMQQYQ 377
>gi|17227795|ref|NP_484343.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
gi|17135277|dbj|BAB77823.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
Length = 388
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 181/327 (55%), Gaps = 38/327 (11%)
Query: 27 VPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRR 86
+PF + S + ADLV++GD WL+ AI+++LI+ I + + W L +W+ + R
Sbjct: 97 IPFRQ----SQTFPVADLVTLGDYWLTTAIERKLIQAIETEQLKQW-SGLDSRWRELVTR 151
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSP 146
N+ G DP+GK+WAAPYRWG+ VI Y + KF+K P +DW DLWR EL RIS+++ P
Sbjct: 152 NEQGVPDPQGKVWAAPYRWGSTVIVYDREKFKKLGWIP-QDWSDLWRSELRSRISVLDQP 210
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
RE+IG VLK +G SYN+ N+ +++ L Q +++ S YL+ +GD W
Sbjct: 211 REIIGLVLKKLGKSYNTENL-----ATVPDLEKELQTFNQQVKIYSSNTYLEPLILGDTW 265
Query: 207 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIH 266
+AVGWSSD++P + R ++VV+P+SG S+WADLW P ET + G L
Sbjct: 266 LAVGWSSDLIPVLARYPQLSVVIPRSGTSIWADLWVSPK----ETAKDG--------LSS 313
Query: 267 QWIEFCLQ--TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE 324
QWI+FCLQ AR + + SP A + E L L + E
Sbjct: 314 QWIDFCLQPNIARQIAL---LTKTNSPVATNIGTADIQESL--------GGLFLN--SQE 360
Query: 325 ILARCEFLEPLSEATLSDYEWLVADLQ 351
+ A+ EFL PLS YE L A ++
Sbjct: 361 VFAKGEFLLPLSPEATKQYEALFAKIK 387
>gi|440756421|ref|ZP_20935622.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
gi|440173643|gb|ELP53101.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
Length = 382
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 178/305 (58%), Gaps = 29/305 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+LV++GD+WL AI LI+P+ ++ +W K L +W+ + RN G+++ GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGA 157
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
NS+++ QV G ++ L L Q R + S +YL+ +GDVW++VGWS+D+LP R
Sbjct: 217 NSSDLK-QVMG----LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDR 271
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ + VVVPKSG SLW+D+W P + P+ L+ QWI+FC Q A
Sbjct: 272 YNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESANKI 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
G SP L ++P ++ ++ L+V E + + +FL PLS AT
Sbjct: 320 SL-FTSGLSPLILTENPDQIPPDI------RNNPLLVN---PEAVKKSDFLNPLSPATEQ 369
Query: 342 DYEWL 346
+YE L
Sbjct: 370 EYEQL 374
>gi|354567783|ref|ZP_08986951.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353542241|gb|EHC11705.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 382
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/325 (38%), Positives = 181/325 (55%), Gaps = 34/325 (10%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
FN S ADLV++GD WL +I+K+LI+P+ + + W L +W+ + RN+
Sbjct: 89 FNLPFGSSQKPNIADLVTLGDYWLKTSIEKKLIQPLEVEQLKQW-AVLPQRWRELVTRNE 147
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
G +D +GK+WAAPYRWG+ VI Y++ KF++ P DW DLWR EL RIS++N PRE
Sbjct: 148 QGFLDTQGKVWAAPYRWGSTVIVYRRDKFQQLGWTPT-DWSDLWRTELRDRISLLNHPRE 206
Query: 149 VIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
VIG VLK +G SYN+ N+D + G ++ L L Q + +DST YL+ IGD W+A
Sbjct: 207 VIGLVLKKLGKSYNTENLD-AIPG----LEAELRALNQQVKFYDSTRYLEPLIIGDTWLA 261
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
VGWS DVLP V R +AVV P SG +LWAD+W P + L ++W
Sbjct: 262 VGWSDDVLPVVTRYPQLAVVTPLSGTALWADVWVKPMGI------------NQANLAYKW 309
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTL--VKLPEELLKGKPSQDTNLIVGVPPAEIL 326
I+FC Q A +Q I + S + T + + E++ + D EIL
Sbjct: 310 IDFCWQPNIA---EQIFILTKTNSPIPTNIRASNIQEQIRNFLLNND----------EIL 356
Query: 327 ARCEFLEPLSEATLSDYEWLVADLQ 351
+ EFL+PL A + Y+ + A ++
Sbjct: 357 GKSEFLQPLPLAVAAQYKSIFAKIK 381
>gi|425443832|ref|ZP_18823896.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
gi|389733602|emb|CCI02643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
Length = 382
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 177/305 (58%), Gaps = 29/305 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+LV++GD+WL AI LI+P+ ++ +W K L +W+ + RN G+ GK+WAA
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWAA 157
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
NS+++ QV G ++ L L Q R + S +YL+ +GDVW++VGWS+D+LP R
Sbjct: 217 NSSDLK-QVMG----LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVGDR 271
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ + VVVPKSG SLW+D+W P + P+ L+ QWI+FC Q A
Sbjct: 272 YNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESANKI 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
G SP L ++P + +K P L+V E + + +FL PLS AT
Sbjct: 320 SL-FTSGLSPLVLTENPDQIPSD-IKNNP-----LLVN---PEAIKKSDFLNPLSPATEQ 369
Query: 342 DYEWL 346
+YE L
Sbjct: 370 EYEQL 374
>gi|307153205|ref|YP_003888589.1| extracellular solute-binding protein [Cyanothece sp. PCC 7822]
gi|306983433|gb|ADN15314.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC
7822]
Length = 383
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 185/321 (57%), Gaps = 33/321 (10%)
Query: 24 NLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVY 83
N +PF + K AP DLV++GDSWL+ AI+++LI P+ G D W + L +W+
Sbjct: 84 NSGLPF--INKKPAP--VPDLVTLGDSWLATAIEQKLISPLEG--DLKW-QQLPPRWQEI 136
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
+RR++ G + +GKIW APYRWGT +IAY+K +K P +DW DLWR ++ RIS++
Sbjct: 137 VRRDEQGMVSQQGKIWGAPYRWGTTMIAYRKDNLKKLGWEP-KDWGDLWREDVRNRISLL 195
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
+ PREVIG LK +G SYNS+NI+ Q+ +++ +L L QA+ + S HYL+ +G
Sbjct: 196 DQPREVIGLTLKKLGYSYNSDNIN-QIP----NLKSDLVALNKQAKFYSSDHYLEPLILG 250
Query: 204 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP 263
D W+AVGWS +++P +K ++A VVP+SG +LWAD+W PAA V PS
Sbjct: 251 DTWLAVGWSHEIIPLLKNYRDIAAVVPQSGTALWADIWVKPAA-----------VIKPSK 299
Query: 264 LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPA 323
+ WI FC Q+ A SP LE LP+ + +D L++
Sbjct: 300 FVQDWINFCWQSKSAKEISL-FTDAVSPVILELAPENLPQAI------RDNPLLLI--DK 350
Query: 324 EILARCEFLEPLSEATLSDYE 344
IL + +F++PL + YE
Sbjct: 351 NILEKSDFIKPLPASVEKQYE 371
>gi|425472395|ref|ZP_18851246.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
gi|389881535|emb|CCI37923.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
Length = 382
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 176/305 (57%), Gaps = 29/305 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+LV++GD+WL AI LI+P+ ++ +W K L +W+ + RN G+ GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWGA 157
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
NS+++ QV G ++ L L Q + + S HYL+ +GDVWV+VGWS+D+LP R
Sbjct: 217 NSSDLK-QVMG----LKDQLFALQKQVKFYSSQHYLQPLILGDVWVSVGWSNDILPVSNR 271
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ + VVVPKSG SLW+D+W P + P+ L+ QWI+FC Q A
Sbjct: 272 YNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESATKI 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
G SP L + P+++ P N ++ P E + + +FL PLS AT
Sbjct: 320 SL-FTSGLSP----LILTENPDQI---SPDIRNNPLLVNP--EAVKKSDFLNPLSPATEQ 369
Query: 342 DYEWL 346
+YE L
Sbjct: 370 EYEQL 374
>gi|428311092|ref|YP_007122069.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428252704|gb|AFZ18663.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 432
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 192/356 (53%), Gaps = 33/356 (9%)
Query: 6 KRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIA 65
KRL+ L D S+PF K P +A DLV++GD WL AI + LI+P+
Sbjct: 95 KRLQTWKQLAEKKDD-RQGFSLPF---VGKKTPKLA-DLVTLGDYWLESAIGQGLIKPLE 149
Query: 66 GAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPI 125
E + W K L +W+ + RN G + G++W APYRWGT VI Y++ KF + P
Sbjct: 150 VQELEGW-KNLPSRWQEIVTRNQQGLLAKNGQVWGAPYRWGTTVIVYRRDKFEELGWTP- 207
Query: 126 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLA 185
+DW DLWRPEL RIS+++ PREVIG LK +G SYN N+ QV ++++ L L
Sbjct: 208 KDWSDLWRPELRDRISLLDQPREVIGLTLKKLGFSYNHKNLS-QVP----NLKEELLKLH 262
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 245
Q + + S YL+ +GD W+A+GWS+DVL + +VP SG +LWAD+W PA
Sbjct: 263 QQVKYYSSNQYLEPLLLGDTWLALGWSTDVLSVQSGYRQIDSIVPLSGTALWADVWVQPA 322
Query: 246 --ASRLETKQIGGRVRGPS------PLIHQWIEFCLQTARALPFKQEVI--PGASPSALE 295
A+R T + PL QWIEFC + LP +Q + ASP +
Sbjct: 323 PIAARSNTVKTSASSTPQQDSSVNMPLTKQWIEFCW---KPLPAQQISVLSHAASPMFAD 379
Query: 296 TTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 351
KLP+ L + + + VP +++L +CEFLEPL + DYE L +++
Sbjct: 380 VEPTKLPKTLRENR--------LLVPDSKVLKKCEFLEPLPQEISQDYEKLWTEIR 427
>gi|428207943|ref|YP_007092296.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428009864|gb|AFY88427.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 398
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 178/303 (58%), Gaps = 29/303 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
A+LV+VGD WL+ AI++ LI+P+ + W + L ++W+ +RRN AG+ D +G +WAA
Sbjct: 105 ANLVTVGDYWLAAAIRQNLIQPLDPTQLSQWSQ-LPNRWQELVRRNQAGQFDAKGDVWAA 163
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF+ N P +DW DLWR EL RIS+ N PREVIG LKY+G SY
Sbjct: 164 PYRWGYTVIAYNRDKFQSLNWKP-QDWGDLWREELRDRISLPNHPREVIGLTLKYLGKSY 222
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ N QV ++VQ L L Q +L+ S YL+ +GD W+AVGWS+D++P ++R
Sbjct: 223 NTENPS-QVP--DLTVQ--LNRLQPQVKLYSSDTYLQPLILGDTWLAVGWSNDIIPVMQR 277
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+A ++P+SG SLWADLWA P + + L +QWI+FC Q A
Sbjct: 278 HRQIAAIIPQSGTSLWADLWANPIQANSDRA-----------LEYQWIDFCWQPQIA--- 323
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
+Q ++ G + S + + PE + Q + VP IL + EFL PL+ +
Sbjct: 324 RQILLFGRTNSPIPFQID--PENI------QAELRPLLVPNDNILDKSEFLRPLTPDAIQ 375
Query: 342 DYE 344
++
Sbjct: 376 QHQ 378
>gi|425451461|ref|ZP_18831282.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
gi|389767205|emb|CCI07314.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
Length = 392
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 177/305 (58%), Gaps = 29/305 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+LV++GD+WL AI LI+P+ ++ +W K L +W+ + RN G+++ GK+W A
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGA 157
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N +++ QV G ++ L L Q R + S +YL+ +GDVW++VGWS+D+LP R
Sbjct: 217 NYSDLK-QVTG----LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDR 271
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ + VVVPKSG SLW+D+W P + P+ L+ QWI+FC Q A
Sbjct: 272 YNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLVEQWIDFCWQPESANKI 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
G SP L ++P ++ ++ L+V E + + +FL PLS AT
Sbjct: 320 SL-FTSGLSPLILTENPDQIPPDI------RNNPLLVN---PEAVKKSDFLNPLSPATEQ 369
Query: 342 DYEWL 346
+YE L
Sbjct: 370 EYEQL 374
>gi|119490051|ref|ZP_01622675.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
gi|119454203|gb|EAW35355.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
Length = 357
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 179/313 (57%), Gaps = 27/313 (8%)
Query: 33 KAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEI 92
K++ ++DL+ +GD WL+ AI+++L++P+ Q W + L +W+ + RN G +
Sbjct: 58 KSRPENRSSSDLIMIGDYWLTQAIQQQLVQPLDPQVWQRWNQ-LPPQWQALVTRNSQGML 116
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP+G++WAAPYRWGT IAY++ +F P +DW DLWR ++ +IS++N+PRE IG
Sbjct: 117 DPQGQVWAAPYRWGTTAIAYRREQFETLGWTP-QDWGDLWREDIRNQISVLNNPRETIGL 175
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
+LK +G+SYN ++DL V ++ L +L+DS YLK GD W+AVGWS
Sbjct: 176 ILKKLGSSYNITDLDLVV-----DLEDEFRQLHRNIKLYDSNTYLKPLITGDTWLAVGWS 230
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFC 272
+D R N+ VV+P SG +LWAD+W P + K I PL QWI+FC
Sbjct: 231 TDFSEKFCRQHNIGVVIPTSGTALWADVWVQPTSE----KPISNL-----PLAQQWIDFC 281
Query: 273 LQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
+ A + ++ G SP + +LPE L Q+ L+ P AEIL + EF
Sbjct: 282 WKPEIAT--QMSILTGTTSPIVNQLQPSELPETL------QNNPLL--FPKAEILEQSEF 331
Query: 332 LEPLSEATLSDYE 344
L PL E+TL Y+
Sbjct: 332 LLPLPESTLKQYQ 344
>gi|428775058|ref|YP_007166845.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
gi|428689337|gb|AFZ42631.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
Length = 372
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 166/306 (54%), Gaps = 26/306 (8%)
Query: 41 AADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWA 100
A+LV++GD WL AI + LI+P+ +W K L W+ ++R+ G + P GKIW
Sbjct: 83 TANLVTLGDIWLEEAIAENLIQPLDLTSVDNWRK-LPSVWQRLVQRDAQGNLAPNGKIWG 141
Query: 101 APYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 160
APYRWG VIAY+ +FR+ PI DWKDLWR EL R+S++N PREVIG LK +G S
Sbjct: 142 APYRWGNTVIAYRADQFREAGYEPITDWKDLWREELRDRVSLLNQPREVIGFTLKKLGQS 201
Query: 161 YNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 220
YN+++++ QV K LA L Q + + S YL+ + D WVAVGWSSD+L
Sbjct: 202 YNTSDLE-QVPNLKTE----LATLHQQVKFYSSQAYLQPLVLEDTWVAVGWSSDILQLQT 256
Query: 221 RMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALP 280
R ++ V+P+SG SLWAD+W P S + QWI FC + A
Sbjct: 257 RYPDLTTVIPESGTSLWADVWVQPTGK-----------PSLSEAMLQWINFCWEEQAATQ 305
Query: 281 FKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 340
+SP L T +LPE L + + + +PP ++ + EFL PLS T
Sbjct: 306 IGL-FTNASSPILLNTKTDQLPESLQQDQ--------LRIPPQTLIEKSEFLLPLSAQTK 356
Query: 341 SDYEWL 346
Y+ L
Sbjct: 357 KQYQQL 362
>gi|332706228|ref|ZP_08426297.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355065|gb|EGJ34536.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 396
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 180/323 (55%), Gaps = 19/323 (5%)
Query: 23 NNLSVPF-NKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWK 81
NN F + ++ +S ++ DLV++GD WL AI++ LI+P+ W K L +++
Sbjct: 83 NNQDRSFLDLIRIRSRTPISPDLVTLGDYWLKSAIEQELIQPLNIETLPGW-KQLPPEYQ 141
Query: 82 VYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 141
++R+ G++D GK+W APYRWG VIAY++ KF+ P DW DLWR L RIS
Sbjct: 142 KLVKRDQTGQLDNSGKVWGAPYRWGATVIAYRRDKFKALGWTPT-DWSDLWRESLRDRIS 200
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
++N PREVIG LK +G SYN +++ QV K +++Q LA Q + + S HYLK
Sbjct: 201 VLNHPREVIGLTLKNLGLSYNQQDLN-QVKDLKPALRQ----LAKQVKFYSSDHYLKPLV 255
Query: 202 IGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGP 261
+GD WVAVGWS+D+L R + VVP+SG +LW+D+W P + +
Sbjct: 256 LGDTWVAVGWSTDILALRTRDRQIEAVVPQSGTALWSDVWVKPVSVSSASDSSESNSESD 315
Query: 262 SPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVP 321
+WIEFC + A + ASP L+ KLP+++ L + +P
Sbjct: 316 L--SKKWIEFCWDSKSAKQISL-LTNAASPILLKIPRNKLPQDI--------QTLPLLLP 364
Query: 322 PAEILARCEFLEPLSEATLSDYE 344
AEIL +CEFL PL E+T YE
Sbjct: 365 EAEILNKCEFLHPLPESTQKQYE 387
>gi|298492009|ref|YP_003722186.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298233927|gb|ADI65063.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 383
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 171/305 (56%), Gaps = 31/305 (10%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
ADLV++GD WL AI+++LI+P+ + + W L+ +W+ +RR+D G IDP+GKIWAA
Sbjct: 101 ADLVTLGDFWLKAAIEQKLIQPLETEKIKQWL-SLNLRWQQLVRRDDQGNIDPQGKIWAA 159
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PY WG VI Y KF+K + P +DW DLWR EL RIS++N PREVIG VLK +G SY
Sbjct: 160 PYHWGNTVIIYNGEKFQKFDWQP-KDWSDLWRSELRSRISLLNHPREVIGLVLKKLGESY 218
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ NI Q+ K L L Q + +DST YL+ GD W+AVGWS+DV+P + R
Sbjct: 219 NTENIT-QIPDLKAE----LLALHQQVKFYDSTTYLEPLLTGDTWLAVGWSNDVMPILSR 273
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ V+P+SG ++WADLW PA T L WI FC Q A
Sbjct: 274 YPKLTAVIPQSGTAMWADLWVSPAEVEQNT------------LASDWINFCWQPNIA--- 318
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
KQ I + S + + + KP Q NL++ E+ + EFL PL +
Sbjct: 319 KQIAILTKNNSPITNIVASDLQ-----KPLQ--NLLLN--NQELFDKSEFLLPLPASVNK 369
Query: 342 DYEWL 346
Y++L
Sbjct: 370 GYKYL 374
>gi|425456329|ref|ZP_18836040.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
gi|389802604|emb|CCI18362.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
Length = 382
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 176/305 (57%), Gaps = 29/305 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+LV++GD+WL AI LI+P+ ++ +W K L +W+ + RN G+ GK+WAA
Sbjct: 99 GNLVTLGDAWLGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWAA 157
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N +++ QV G ++ L L + R + S +YL+ +GDVW++VGWS+D+LP R
Sbjct: 217 NYSDLK-QVMG----LKDQLFALQKRVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDR 271
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ + VVVPKSG SLW+D+W P + P+ L+ QWI+FC Q A
Sbjct: 272 YNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLVEQWIDFCWQPESATKI 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
G SP L ++P + +K P L+V E + + +FL PLS AT
Sbjct: 320 SL-FTSGLSPLVLTENPDQIPSD-IKNNP-----LLVN---PEAIKKSDFLNPLSPATEQ 369
Query: 342 DYEWL 346
+YE L
Sbjct: 370 EYEQL 374
>gi|186683650|ref|YP_001866846.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186466102|gb|ACC81903.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 385
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 176/314 (56%), Gaps = 35/314 (11%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIA---GAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKI 98
ADLV++GD WL AI ++LI+P+ G + + W L KWK + R+D G +D +GK+
Sbjct: 102 ADLVTLGDYWLKAAIGQKLIQPLQELQGNQLKQW-STLDEKWKKLVTRDDQGNLDTQGKV 160
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
W APYRWGT VI Y + KFR+ P +DW DLWR + RIS++N PREVIG VLK +G
Sbjct: 161 WGAPYRWGTTVIVYNRDKFRELGWTP-KDWSDLWRDGMQQRISLLNQPREVIGLVLKKLG 219
Query: 159 ASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 218
SYN+ N+D QV ++++ L L Q + + S +YL+ +GD W+AVGWSSDVL
Sbjct: 220 KSYNTENLD-QVP----NLEKELQTLNQQVKFYSSNNYLEPLIMGDTWLAVGWSSDVLQV 274
Query: 219 VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
+ R + V+P+SG ++WADLW PA T L QWI+FC Q + A
Sbjct: 275 LGRYPQLGAVIPQSGTAMWADLWVRPAGINKGT------------LSDQWIDFCWQPSIA 322
Query: 279 LPFKQEVIPGASPSALETTLVKLP-EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 337
KQ + S S + T + +E ++ D E+L + EFL PL
Sbjct: 323 ---KQISVLTKSNSPISTNIAASDIQEPVRSLLQSD---------REVLDKSEFLLPLPP 370
Query: 338 ATLSDYEWLVADLQ 351
+ + YE L A ++
Sbjct: 371 SAIKQYESLFAKMK 384
>gi|282899638|ref|ZP_06307602.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
gi|281195517|gb|EFA70450.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
Length = 394
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 186/319 (58%), Gaps = 31/319 (9%)
Query: 35 KSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDP 94
K +P+ DLV++GD WL AI+++LI P+ + + W L KW+ ++R+D G D
Sbjct: 103 KKSPH--CDLVTLGDYWLKPAIEQKLIRPLPIKKSKQW-SSLQEKWQQLVKRDDQGNWDS 159
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
+G++W APYRWG V+ Y + + +K N P DW DLWR +L RIS+ N PREVIG VL
Sbjct: 160 QGEVWGAPYRWGNTVLVYNQKQLQKFNWQP-RDWGDLWRSDLRSRISLPNHPREVIGLVL 218
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
K +G SYN+ N ++++ I ++ L Q + +DST+YL+ GD W+AVGWS+D
Sbjct: 219 KKLGRSYNTVN-PVKISNLNIELES----LNQQVKFYDSTNYLEPLITGDTWLAVGWSND 273
Query: 215 VLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 274
++P + R + V+P+SG ++WADLW PA + L T++ LI QWI+FC Q
Sbjct: 274 IIPILSRYPQLRAVIPQSGTAIWADLWVQPANT-LMTEETDN-------LISQWIDFCWQ 325
Query: 275 TARALPFKQEVIPGA--SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFL 332
A Q V+ G +P+ + T+ V +G NL+ E+L +CEFL
Sbjct: 326 PDIA---GQIVMLGKTNTPTFINTSKV-------QGISDSIQNLL--AIEQELLEKCEFL 373
Query: 333 EPLSEATLSDYEWLVADLQ 351
+PLS +++ YE L ++
Sbjct: 374 KPLSLESINQYEELFLKMK 392
>gi|425439720|ref|ZP_18820036.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
gi|389720001|emb|CCH96242.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
Length = 382
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 181/323 (56%), Gaps = 34/323 (10%)
Query: 24 NLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVY 83
++S+PF + K +LV++GD+WL AI LI+P+ ++ +W K L +W+
Sbjct: 86 SISIPFREQKP-----AIGNLVTLGDAWLGKAITNGLIQPLDTSQLSNWSK-LPPRWQEN 139
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
+ RN G+ GK+W APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++
Sbjct: 140 MARNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALI 198
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
++ REVIG LK +G SYNS+++ A ++ L L Q + + +YL+ +G
Sbjct: 199 DNRREVIGLTLKKLGYSYNSSDLKQVTA-----LKDQLFALQKQVKFYSYQYYLQPLILG 253
Query: 204 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP 263
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P + P+
Sbjct: 254 DVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPVLTT------------PNS 301
Query: 264 LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPA 323
L+ QWI+FC Q A G SP L + P+++ P N ++ P
Sbjct: 302 LVEQWIDFCWQPESATKISL-FTSGLSP----LILTQNPDQI---SPDIRNNPLLVNP-- 351
Query: 324 EILARCEFLEPLSEATLSDYEWL 346
E + + +FL PLS AT +YE L
Sbjct: 352 EAIKKSDFLNPLSPATEQEYEQL 374
>gi|428769711|ref|YP_007161501.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428683990|gb|AFZ53457.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 380
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 34/302 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DL ++G+ WL FAI+ LI+P+ ++W K LS ++ + RN+ G++D +G+IW AP
Sbjct: 107 DLTTLGNYWLPFAIENELIDPLDLKILENWSK-LSPLFQKLVIRNNQGKLDNQGQIWGAP 165
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
YRWG +IAY++ K + P +DW+DLW+PE+ R S++N PREVIG VLK +G SYN
Sbjct: 166 YRWGYTMIAYREDKLQNLGWQP-QDWEDLWKPEIKHRFSLLNQPREVIGLVLKKLGYSYN 224
Query: 163 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 222
+ N+ Q+ ++ L L Q + +DS +YL+ +GD W+AVGWS+D++P ++R
Sbjct: 225 TKNLK-QIN----NLLPELKTLNQQVKFYDSRNYLQPLILGDTWLAVGWSTDIIPLIERY 279
Query: 223 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 282
N+ V+P SG SLWAD+W P E ++ I+ WI+FC Q+ A +
Sbjct: 280 HNIKAVIPLSGTSLWADIWVKPRNQSSELEK-----------IYNWIDFCWQSKSA---R 325
Query: 283 QEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSD 342
Q + + S +ET +TN + + E+LA+ EF+EPL ++
Sbjct: 326 QISLFSSGISPVETNF-------------SETNRQIPLMSPEVLAKSEFIEPLESQFFAE 372
Query: 343 YE 344
YE
Sbjct: 373 YE 374
>gi|254413480|ref|ZP_05027250.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196179587|gb|EDX74581.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 397
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 171/311 (54%), Gaps = 28/311 (9%)
Query: 38 PYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGK 97
P A+LV++GD WL AI ++LI+P+ + W + L +W+ +RRN G++D G
Sbjct: 97 PPAIANLVTLGDYWLESAIGEQLIQPLELSTLPGW-QQLPPRWQGIVRRNRQGQLDESGL 155
Query: 98 IWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 157
IW APYRWGT+VIAY++ KF + P DW DLWRPEL RIS+++SPREVIG LK +
Sbjct: 156 IWGAPYRWGTVVIAYRRDKFEELGWTPT-DWSDLWRPELRDRISLLDSPREVIGLTLKKL 214
Query: 158 GASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLP 217
G SY++ N+ QV K L L Q +L+ S HYL+ +GD W+AVGWS+D+L
Sbjct: 215 GFSYDTANLS-QVPNLKT----ELLDLHKQVKLYSSDHYLEPLVLGDTWLAVGWSTDILS 269
Query: 218 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-----LIHQWIEFC 272
R + V+P+SG SLWAD+W PA + + P P L QWI+FC
Sbjct: 270 LRGRDRQIQAVIPRSGTSLWADVWVQPAVQKTAAE-------SPEPETSQSLTQQWIDFC 322
Query: 273 LQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFL 332
+ A+ + ASP + LP+ L + + + +P IL EFL
Sbjct: 323 WRQQSAIDISL-LSHAASPILVTMNPATLPDSLRQSE--------ILLPEPSILEDSEFL 373
Query: 333 EPLSEATLSDY 343
PL + + Y
Sbjct: 374 YPLPQEAIEQY 384
>gi|428204536|ref|YP_007083125.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
gi|427981968|gb|AFY79568.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
Length = 399
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 178/314 (56%), Gaps = 27/314 (8%)
Query: 32 VKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGE 91
V K P +ADLV++GD WL AI ++LI P+ + W + L +W+ +RRN+ G
Sbjct: 91 VIGKETP-TSADLVTLGDYWLEKAIVEQLIRPLNVNDLTGWQR-LPTRWQALVRRNEQGM 148
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
D RG+IW APYRWG+ +IAY++ +F K P DW DLWR EL RIS+++ PREVIG
Sbjct: 149 PDERGQIWGAPYRWGSTLIAYRQEEFEKLGWLPT-DWGDLWREELRDRISLLDQPREVIG 207
Query: 152 SVLKYMGASYNSNNIDLQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK + SYNS +++ KI +++ L L Q + + S YL+ +GD W+AVG
Sbjct: 208 LTLKKLKHSYNSQDLN------KIPNLKSELLSLHRQVKFYSSDRYLQPLILGDTWLAVG 261
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
WSSD+L +R + V+P+SG SLWAD+W PA+ + + + + L+ QWI+
Sbjct: 262 WSSDILALTERYRTIKAVIPRSGTSLWADIWVQPASVQETSDR--------TSLLKQWID 313
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
FC QT A ASP L +L +++ K N ++ + P +IL +CE
Sbjct: 314 FCWQTQSANQISL-FTNAASPIVLNLKADELSKDIRK-------NPLLLIEP-QILDKCE 364
Query: 331 FLEPLSEATLSDYE 344
FL PL +YE
Sbjct: 365 FLYPLPAQVQKEYE 378
>gi|428774536|ref|YP_007166324.1| extracellular solute-binding protein [Cyanobacterium stanieri PCC
7202]
gi|428688815|gb|AFZ48675.1| extracellular solute-binding protein family 1 [Cyanobacterium
stanieri PCC 7202]
Length = 378
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 176/304 (57%), Gaps = 37/304 (12%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
ADLV++G+ WLS AI++ LI+P+ E +W + ++ + RN+ G+ID G+IW A
Sbjct: 101 ADLVTLGNYWLSLAIQENLIQPLNQNELNNW-ANIPPVFQNLVMRNNQGDIDGNGQIWGA 159
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG +IAY++ K P +DW DLWR EL +IS+++ PRE+IG +LK +G SY
Sbjct: 160 PYRWGYTMIAYREDKIAPLGFTP-KDWSDLWRVELMNQISLLSQPREIIGLILKKLGYSY 218
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+NNI ++ V + L L NQ + +DST+YL+ GD W+AVGWS+D+LP +++
Sbjct: 219 NTNNIQ-EIE----DVYRELTTLNNQVKFYDSTNYLQPLINGDTWLAVGWSTDILPVLEQ 273
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ--TARAL 279
N+ V+P+SG SLWAD+W P + L +++G I++WI +C Q +A +
Sbjct: 274 HRNIRAVIPESGTSLWADIWVQPYENNLSEEKLGE--------IYRWINYCWQEDSATRI 325
Query: 280 PFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT 339
F G SP +L + + + + EI A+ EF+EPL E
Sbjct: 326 NF---FTKGNSP-------------ILSAENANNRLQM----SEEIFAKSEFIEPLPETI 365
Query: 340 LSDY 343
++ Y
Sbjct: 366 MAQY 369
>gi|414075874|ref|YP_006995192.1| solute-binding protein [Anabaena sp. 90]
gi|413969290|gb|AFW93379.1| solute-binding protein [Anabaena sp. 90]
Length = 376
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 176/318 (55%), Gaps = 40/318 (12%)
Query: 27 VPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRR 86
+PFN+ + +P A+LV++GD WL AI ++LI+P+A ++ L+ KW+ ++R
Sbjct: 90 LPFNQ--NQKSP--TANLVTLGDYWLQAAIDQKLIQPLATTNIKN-LANLNEKWQQLIKR 144
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSP 146
D GKIW PYRWG VI Y + KF++ P DW DLWR EL RIS++N P
Sbjct: 145 ------DQEGKIWGVPYRWGNTVIIYNQEKFQELGWKPT-DWSDLWRSELQNRISLLNHP 197
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
REVIG VLK +G SYN+ NI Q++ K +Q L Q + +DS +YL+ GD W
Sbjct: 198 REVIGLVLKKLGKSYNTENIK-QISALKPELQ----ALNQQVKFYDSQNYLEPLITGDTW 252
Query: 207 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIH 266
+AVGWS D++P + R A VVP+SG ++W DLW P + L +
Sbjct: 253 LAVGWSHDIIPVISRYQKFAAVVPQSGTAIWTDLWVSPTGVSNDG------------LAY 300
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
QW++FCLQ + KQ + S S ++ +V L Q NL++ AEIL
Sbjct: 301 QWLDFCLQPNTS---KQIALLTKSNSPVDNAMV------LGDIQKQLQNLLLT--DAEIL 349
Query: 327 ARCEFLEPLSEATLSDYE 344
A+ EF+ PL A + +YE
Sbjct: 350 AKSEFILPLPPAVMKEYE 367
>gi|390439185|ref|ZP_10227598.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
gi|389837404|emb|CCI31722.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
Length = 382
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 173/305 (56%), Gaps = 29/305 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+LV++GD+WL AI LI+P+ ++ +W K L +W+ + RN G+ GK+W A
Sbjct: 99 GNLVTLGDAWLGKAITNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWGA 157
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SY
Sbjct: 158 PYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSY 216
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
NS+++ QV G ++ L L Q + + S +YL+ +GD+W++VGWS+D+LP R
Sbjct: 217 NSSDLK-QVTG----LKDELFALQKQVKFYSSQYYLQPLILGDIWLSVGWSNDILPVSDR 271
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+ VVVP SG SLW+D+W P + P+ L+ QWI+FC Q A
Sbjct: 272 YKKIKVVVPNSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESATKI 319
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
G SP ++P + +K P L+V E + + +FL PLS AT
Sbjct: 320 SL-FTSGLSPLIPTENPDQIPPD-IKNNP-----LLVN---PEAIKKSDFLNPLSPATEQ 369
Query: 342 DYEWL 346
+YE L
Sbjct: 370 EYEQL 374
>gi|427717210|ref|YP_007065204.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427349646|gb|AFY32370.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 376
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 185/327 (56%), Gaps = 38/327 (11%)
Query: 27 VPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRR 86
+PF + ++++P AA+LV++GD WL AI+++LI+P+ + + W L +W + R
Sbjct: 85 IPFGQ--SQNSP--AANLVTLGDYWLKAAIEQKLIQPLEVKQVKQW-SALDERWHKLVTR 139
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSP 146
ND G +D +GK+WAAPYRWG+ VI Y + KF++ P DW DLWR E+ RIS++N P
Sbjct: 140 NDQGILDAQGKVWAAPYRWGSTVIVYNRDKFKELGWTP-SDWGDLWREEVRSRISLLNQP 198
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
REVIG LK +G SYN+ N+D QV +++ L L Q + + ST YL+ D W
Sbjct: 199 REVIGLTLKKLGKSYNTENLD-QVP----DLEKELRRLNQQVKFYASTTYLEPLITEDTW 253
Query: 207 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIH 266
+AV WS DV+P + R +A ++P+SG ++W DLW PA+ +T L
Sbjct: 254 LAVAWSDDVMPVLARYPQLAAIIPQSGTAVWVDLWVRPASVSKDT------------LSD 301
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLV--KLPEELLKGKPSQDTNLIVGVPPAE 324
QWI+FC Q A KQ + S S + T +V ++ E+L NL++ E
Sbjct: 302 QWIDFCWQPNIA---KQISLLTKSNSPISTNIVASEIQEKL--------RNLLLS--NRE 348
Query: 325 ILARCEFLEPLSEATLSDYEWLVADLQ 351
+ + EFL PL+ YE L A ++
Sbjct: 349 VFDKSEFLLPLNSTASKQYESLFAKIK 375
>gi|425467732|ref|ZP_18847011.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
gi|389829411|emb|CCI29285.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
Length = 382
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 177/321 (55%), Gaps = 34/321 (10%)
Query: 26 SVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLR 85
S+PF + +LV++GD+WL AI LI+P+ ++ +W K L +W+ +
Sbjct: 88 SIPFREQNT-----AIGNLVTLGDAWLGKAITNGLIQPLDTSQLSNWSK-LPPRWQENMT 141
Query: 86 RNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 145
RN G+ GK+W APYRWG VIAY + KF + + P +DW DLWRPEL G+I+++++
Sbjct: 142 RNAQGQPQTEGKVWGAPYRWGMTVIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDN 200
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
REVIG LK +G SYN +++ A ++ L L Q + + S +YL+ +GDV
Sbjct: 201 RREVIGLTLKKLGYSYNYSDLKQVTA-----LKDQLFALQKQVKFYSSQYYLQPLILGDV 255
Query: 206 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLI 265
W++VGWS+D+LP R + VVVPKSG SLW+D+W P + P+ L+
Sbjct: 256 WLSVGWSNDILPVSDRYKKIKVVVPKSGTSLWSDVWVKPVLTT------------PNSLV 303
Query: 266 HQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEI 325
QWI+FC Q A G SP L + P+++ P N ++ P E
Sbjct: 304 EQWIDFCWQPESATKISL-FTSGLSP----LILTQNPDQI---SPDIRNNPLLVNP--EA 353
Query: 326 LARCEFLEPLSEATLSDYEWL 346
+ + +FL PLS AT +YE L
Sbjct: 354 IKKSDFLNPLSPATEQEYEQL 374
>gi|434397206|ref|YP_007131210.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
gi|428268303|gb|AFZ34244.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
Length = 383
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 173/304 (56%), Gaps = 33/304 (10%)
Query: 44 LVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPY 103
LV++GD+WL+ AI+K+LI+P+ + W K L +W+ ++R+ G++ G+IW APY
Sbjct: 101 LVTLGDTWLTTAIQKQLIQPLDLTQLTAW-KSLDSRWQNLVKRDRNGQLAENGQIWGAPY 159
Query: 104 RWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS 163
RWG +I Y++ KF+ + P +DW+DLW +L RIS+V+ PREVIG LK +G SYN+
Sbjct: 160 RWGNTIIVYRRDKFKDLDWQP-KDWQDLWHQDLRDRISIVDQPREVIGLTLKKLGYSYNT 218
Query: 164 NNIDLQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 222
N+++ KI ++ LA L Q + + S HYL+ IGD W+AVGWS+D+LP KR
Sbjct: 219 NDLN------KIPNLSSELAALHQQIKFYSSDHYLEPLIIGDTWLAVGWSTDILPLSKRY 272
Query: 223 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 282
SN+ VVP+SG S+WADLW P RL G + QWI FC R L
Sbjct: 273 SNLGFVVPQSGTSIWADLWVQP---RLAESNFGE--------LSQWINFCW---RPLAAN 318
Query: 283 QEVIPGASPSALETTL--VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 340
Q + + S + T+ +LP++LL Q + + A EF+ PLS
Sbjct: 319 QISLFTNAISPVTNTMKPTELPQDLLHNSIFQAS--------LKSFALSEFITPLSSQAN 370
Query: 341 SDYE 344
Y+
Sbjct: 371 QQYQ 374
>gi|428778824|ref|YP_007170610.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
gi|428693103|gb|AFZ49253.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
Length = 369
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 167/304 (54%), Gaps = 26/304 (8%)
Query: 41 AADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWA 100
A+LV++GD WL AIKK LI+P+ ++W + L W+ ++R+ G +D RGK+W
Sbjct: 83 TANLVTLGDIWLEKAIKKELIQPLTVNSLRNW-EMLPASWQKLVQRDRNGNLDARGKVWG 141
Query: 101 APYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 160
PYRWG+ VIAY++ +FR+ P DW DLWR EL RIS++N PREVIG LK +G S
Sbjct: 142 IPYRWGSTVIAYREDRFRQAGYDPPTDWGDLWREELRDRISLLNQPREVIGLTLKKLGFS 201
Query: 161 YNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 220
YN+ ++D ++ K + L L Q + + S YL+ + D WVAVGWS+D+L
Sbjct: 202 YNTPDLD-SISDLKTA----LKTLNQQVKFYSSQSYLQPLILEDTWVAVGWSNDLLQLRT 256
Query: 221 RMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALP 280
R ++ ++P+SG +LWADLW P + S I QWI+FCL A
Sbjct: 257 RYPDIKTIIPRSGTALWADLWVNPTGN-----------EAISEAILQWIDFCLNPKAANQ 305
Query: 281 FKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 340
+SP + K+P+ L + K + P +E+L + EFL PLS T
Sbjct: 306 IGI-FTNASSPIFINANRDKIPKSLGEDK--------IKNPSSEVLEKSEFLLPLSPKTE 356
Query: 341 SDYE 344
Y+
Sbjct: 357 EQYQ 360
>gi|218438983|ref|YP_002377312.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
gi|218171711|gb|ACK70444.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
Length = 384
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 31/311 (9%)
Query: 35 KSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDP 94
KS+P ADLV++GD WL AI+++LI P+ E W + L +W+ ++RN G +D
Sbjct: 93 KSSP--VADLVTLGDGWLKGAIEQQLISPLDINELSQWPQ-LPPRWQEIVQRNQLGMVDK 149
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
+G+IW APYRWGT +I Y+ +K + P DW DLWR EL GRIS++N PREVIG L
Sbjct: 150 QGQIWGAPYRWGTTMIVYRSDILKKFDWQPT-DWSDLWREELQGRISLLNQPREVIGLTL 208
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
K +G SYN+ NI L +++ L L Q +++ S +YL+ +GD+W+AVGWS++
Sbjct: 209 KKLGYSYNTQNISL-----IPNLKSELFALNKQTKIYSSNYYLQPLILGDIWLAVGWSNE 263
Query: 215 VLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS-RLETKQIGGRVRGPSPLIHQWIEFCL 273
++P + R ++ +VP+SG +LWAD+W P + +L S L +WI FC
Sbjct: 264 IIPLLSRRRDLKAIVPQSGTALWADVWVKPTSDVKL------------SNLAQEWINFCW 311
Query: 274 QTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLE 333
Q A+ SP L+ KLP+ +L N ++ + P IL + EF++
Sbjct: 312 QPT-AVQQISLYTDAVSPLILDQNSEKLPKPIL-------NNPLLFIEPT-ILNKSEFIK 362
Query: 334 PLSEATLSDYE 344
PL ++ + YE
Sbjct: 363 PLPPSSQAQYE 373
>gi|257060659|ref|YP_003138547.1| hypothetical protein Cyan8802_2862 [Cyanothece sp. PCC 8802]
gi|256590825|gb|ACV01712.1| conserved hypothetical protein [Cyanothece sp. PCC 8802]
Length = 391
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 172/303 (56%), Gaps = 26/303 (8%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
DLV++GD+WLS AI+ LIEP+ W K L +W+ ++R+ G + P+G+IW A
Sbjct: 103 VDLVTLGDAWLSQAIQAELIEPLPLEVIPTWSK-LPSRWQGLVKRDSKGNLSPQGQIWGA 161
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWGT +IAY +F K P +DW DLWR EL RI++V+ PREVIG LK +G SY
Sbjct: 162 PYRWGTTLIAYDSHRFEKLGWTP-KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSY 220
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ ++ QV+ S+ L L Q + + S HYL+ +GD W++VGWSSD++P V
Sbjct: 221 NTTDLS-QVS----SLTSELLALHKQVKYYSSDHYLQPLVVGDAWLSVGWSSDIIPLVNS 275
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
N+ VVP SG +LW+D+W P + +TK S L QW++FC Q +A+
Sbjct: 276 NRNIKAVVPASGTALWSDVWVNPKVKQGDTKL--------SELTKQWLDFCWQD-QAVNQ 326
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
+ G SP + +LP E+ +D L+ I+ +C+F+EPL
Sbjct: 327 ICLLTDGVSPMIYQAK--ELPSEV------KDNPLL--FIDQRIMDKCDFIEPLPLKVKQ 376
Query: 342 DYE 344
+YE
Sbjct: 377 EYE 379
>gi|218248017|ref|YP_002373388.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
gi|218168495|gb|ACK67232.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
Length = 391
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 172/303 (56%), Gaps = 26/303 (8%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
DLV++GD+WL+ AI+ LIEP+ W K L +W+ ++R+ G + P+G+IW A
Sbjct: 103 VDLVTLGDAWLAQAIQAELIEPLPLEVIPTWSK-LPSRWQGLVKRDSKGNLSPQGQIWGA 161
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWGT +IAY +F K P +DW DLWR EL RI++V+ PREVIG LK +G SY
Sbjct: 162 PYRWGTTLIAYDSHRFEKLGWTP-KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSY 220
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ ++ QV+ S+ L L Q + + S HYL+ +GD W++VGWSSD++P V
Sbjct: 221 NTTDLS-QVS----SLTSELLALHKQVKYYSSDHYLQPLVVGDAWLSVGWSSDIIPLVNS 275
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
N+ VVP SG +LW+D+W P + ETK S L QW++FC Q +A+
Sbjct: 276 NRNIKAVVPASGTALWSDVWVNPKVKQGETKL--------SELTKQWLDFCWQD-QAVNQ 326
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
+ G SP + +LP E+ +D L+ I+ +C+F+EPL
Sbjct: 327 ICLLTDGVSPMIYQAK--ELPSEV------KDNPLL--FIDQRIMDKCDFIEPLPLKVKQ 376
Query: 342 DYE 344
+YE
Sbjct: 377 EYE 379
>gi|384250495|gb|EIE23974.1| periplasmic binding protein-like II, partial [Coccomyxa
subellipsoidea C-169]
Length = 310
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 166/286 (58%), Gaps = 12/286 (4%)
Query: 9 KFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAE 68
+FQ+ I I L P + SA AD V++GD WL AI+ LI+PI AE
Sbjct: 33 RFQLAQKPQIADIFEELGQP-RSISLNSA--ARADAVTLGDVWLGPAIRAGLIQPIPEAE 89
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLA--PIE 126
W+ L +W+ ++R G +DP+G +WA P+RWG +IAY+KS + PI
Sbjct: 90 SNRWWGNLPPRWRELVKRGADGSVDPKGLVWACPHRWGCTLIAYRKSARARSAAGAHPIR 149
Query: 127 DWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAG-GKISVQQNLALLA 185
DW DL +P L R++ V+SPRE +G+ LK +G +N+ +L G + Q + L
Sbjct: 150 DWGDLLQPCLRQRVAWVDSPREFVGAALKTLGGGFNTGAAELASLGLSDQDLAQQVDRLR 209
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 245
Q R+F S ++KA G DVW VGWS D++PA +R +V +V P SG SLWAD+WA+P+
Sbjct: 210 QQVRVFSSKEHIKALGAKDVWAVVGWSGDLVPAAERSGDVVLVAPASGTSLWADMWAVPS 269
Query: 246 ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP 291
+ Q G R+RGPSPL+ W+++ LQ +RA + + + GASP
Sbjct: 270 HA-----QHGSRMRGPSPLLPAWLDYWLQPSRAA-WNRGLKSGASP 309
>gi|411118674|ref|ZP_11391054.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710537|gb|EKQ68044.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 407
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 172/321 (53%), Gaps = 32/321 (9%)
Query: 27 VPF--NKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSH-KWKVY 83
VPF N+ K K +L+++GD WL AI + LI PI + W K ++K
Sbjct: 108 VPFLGNRTKNK-----VPNLMTLGDFWLGMAIAQGLISPIDVSSLPTWTKLAQFPQFKQL 162
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
+ RN G++DP G+IWA PYR GT VIAY++ F + NL P DW DLWR +L RI+++
Sbjct: 163 VTRNQQGQLDPDGQIWALPYRIGTTVIAYRRDIFEQRNLQPPTDWSDLWRKDLRRRIALL 222
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
N+PREVIG LK +G SYN+ ++ ++QQ L LL Q + + ST YL+ +
Sbjct: 223 NNPREVIGLTLKKLGKSYNTEDL-----ASVPTLQQELNLLQEQVKYYSSTSYLQPLLLD 277
Query: 204 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP 263
DVW+AVGWS+DVLP ++R +A + P+SG +L ADLW PA +
Sbjct: 278 DVWLAVGWSTDVLPLMQRSRQIAAIAPRSGTALSADLWVHPAMTSTALPAAA-------- 329
Query: 264 LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPA 323
QWIEFC QT A + A+ +L+ P+ L +Q + +P
Sbjct: 330 --LQWIEFCWQTKIATQL------SLATWAVSPSLIGTPDTQLL---AQFRDYPALLPNI 378
Query: 324 EILARCEFLEPLSEATLSDYE 344
+IL EFL PLSE Y
Sbjct: 379 DILQASEFLLPLSETATKQYR 399
>gi|427706446|ref|YP_007048823.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427358951|gb|AFY41673.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
Length = 386
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 147/250 (58%), Gaps = 24/250 (9%)
Query: 27 VPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQ--DWFKCLSHKWKVYL 84
+PF S DLVS+GD WL AI+++LI+P+ AE Q ++ L +W+ +
Sbjct: 91 IPF----INSQTTTVVDLVSLGDYWLKSAIEQKLIQPLEAAEVQKLQYWSKLDERWRQLV 146
Query: 85 RRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVN 144
RND G +DP+GK+WAAPYRWG+ VI Y + KFR+ P +DW DLWR L IS+++
Sbjct: 147 TRNDQGILDPQGKVWAAPYRWGSTVIVYDRHKFRELGWQP-QDWSDLWRDGLRSHISLLD 205
Query: 145 SPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
+PREVIG VLK G SYN+ N+D ++++ L L Q + + S YL+ GD
Sbjct: 206 NPREVIGLVLKKFGKSYNTENLD-----TVPNLEKELQTLNQQVKFYSSNTYLEPLVTGD 260
Query: 205 VWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL 264
W+AVGWSSDVLP + R + V+P+SG ++WADLW P + + +
Sbjct: 261 TWLAVGWSSDVLPLLSRYPQLNAVIPQSGTAIWADLWVRPTKA------------SKNDI 308
Query: 265 IHQWIEFCLQ 274
+WI+FC Q
Sbjct: 309 SSKWIDFCWQ 318
>gi|443313248|ref|ZP_21042860.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
gi|442776653|gb|ELR86934.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
Length = 383
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 169/303 (55%), Gaps = 29/303 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
ADL+++GD L AI ++LI+P+ + W + L +W+ +RRN GE+D G+IWAA
Sbjct: 102 ADLLTLGDFRLKEAIAQKLIQPLEITDLSQW-QNLPSRWQELVRRNAQGEVDINGQIWAA 160
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWG VIAY + KF P +W DLWR EL RIS+ N PREVIG LK +G SY
Sbjct: 161 PYRWGNTVIAYNRKKFESLGWTPT-NWSDLWREELRSRISLPNQPREVIGLTLKKLGYSY 219
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
NS N+ QV+ + L L Q + + S Y++ +GD W+AVGWSSDV+P ++R
Sbjct: 220 NSQNLQ-QVS----QLADQLKTLHQQVKFYSSDRYMEPLILGDTWLAVGWSSDVIPVIQR 274
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
+A +VP+SG+++WAD+W P S + L QWI+FC LP
Sbjct: 275 YQEIAAIVPQSGSAIWADVWVSPTKSPVNKL-----------LAKQWIDFCW-----LPQ 318
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
Q+ I S + + P ++ +G NL++ +E A+ EFL PL + T+
Sbjct: 319 SQKQISILSKALSPIEIDINPTDVQEGL----RNLLLV--KSETFAQSEFLLPLPKETMQ 372
Query: 342 DYE 344
Y+
Sbjct: 373 QYK 375
>gi|282898041|ref|ZP_06306036.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
gi|281197185|gb|EFA72086.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
Length = 275
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 171/292 (58%), Gaps = 29/292 (9%)
Query: 56 IKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKS 115
+ K+LI+P+ + + W L KW+ ++R+D G D +GK+W APYRWG V+ Y +
Sbjct: 1 MSKKLIQPLPIKKSKQW-SSLQEKWQQLVKRDDQGNWDSQGKVWGAPYRWGNTVLVYNQK 59
Query: 116 KFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 175
+ + N PI DW DLWR +L RIS+ N PREVIG VLK +G SYN+ N +++ KI
Sbjct: 60 QLQNFNWQPI-DWSDLWRSDLRSRISLPNHPREVIGLVLKKLGRSYNTVN-PVEIPNLKI 117
Query: 176 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGAS 235
++ L Q + ++ST+YL+ GD W+AVGWS+D++P + R + V+P+SG +
Sbjct: 118 ELES----LNQQVKFYESTNYLEPLITGDTWLAVGWSNDIIPILSRYPQLRAVIPQSGTA 173
Query: 236 LWADLWAIPAASRL-ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA--SPS 292
+WAD+W PA + + ET + LI QWI+FC Q A +Q V+ G +P+
Sbjct: 174 IWADIWVQPANTLITETDKTDN-------LILQWIDFCWQPDIA---RQIVMLGKTNTPT 223
Query: 293 ALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 344
+ T+ V +G NL+ V E+L +CEFL+PLS +++ YE
Sbjct: 224 FVNTSKV-------QGISDDTQNLL--VIEHELLEKCEFLKPLSLESINQYE 266
>gi|67921536|ref|ZP_00515054.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|416384741|ref|ZP_11684684.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
gi|67856648|gb|EAM51889.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|357264996|gb|EHJ13812.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
Length = 387
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 175/308 (56%), Gaps = 31/308 (10%)
Query: 38 PYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGK 97
P +D V++GD WL AI+K LI+P+ AE ++W + L +WK ++R+ G + G
Sbjct: 99 PPSISDFVTLGDVWLGEAIEKELIDPLDIAEIENW-QTLPSRWKNLVKRDRQGNLQENGL 157
Query: 98 IWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 157
IW APYRWGT +IAY+ K + P +DW DLW L+ RISMVN PRE+IG LK +
Sbjct: 158 IWGAPYRWGTTLIAYRSDKL---DWQP-QDWSDLWDERLSDRISMVNQPREIIGLTLKQL 213
Query: 158 GASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLP 217
G SYN+ N++ +V ++ L L + + + HYL+ +GDVWV+VGWS++++P
Sbjct: 214 GKSYNTENLE-EVP----ELKSELLNLNKRVKYYSDQHYLQPLVVGDVWVSVGWSNEIIP 268
Query: 218 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL--QT 275
+ + N+ VVP SG ++W+D+W P A ET+ S + QW+ FC Q
Sbjct: 269 LMAKSPNIKAVVPTSGTAIWSDIWVKPKAKETETEL--------SEIAKQWLNFCWQPQA 320
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
AR + + ASP T+ K +EL +P N ++ + A I +C+FLEPL
Sbjct: 321 ARLMSLFAD---AASPVI--NTIDK--DEL---EPDITNNPLLFIDSA-IFDKCDFLEPL 369
Query: 336 SEATLSDY 343
S+ + Y
Sbjct: 370 SKQSKEQY 377
>gi|172036028|ref|YP_001802529.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|354552834|ref|ZP_08972141.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
gi|171697482|gb|ACB50463.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|353554664|gb|EHC24053.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
Length = 390
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 173/315 (54%), Gaps = 27/315 (8%)
Query: 38 PYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGK 97
P +D V++GD WL+ AIKK LIEP+ + ++W + L +W+ ++R+ G++ G
Sbjct: 99 PPSLSDFVTLGDVWLADAIKKELIEPLNLTQIENWNQ-LPSRWQTLVKRDQQGQLQDNGL 157
Query: 98 IWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 157
IW APYRWGT +IAY+ K + P +DW DLW L+ RIS+V+ REV+G LK +
Sbjct: 158 IWGAPYRWGTTLIAYRSDKL---DWQP-QDWSDLWDQRLSDRISVVDQYREVMGLTLKKL 213
Query: 158 GASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLP 217
G SYN+ +D QV ++ L L Q + + S HYL+ +GDVWV+VGWS++++P
Sbjct: 214 GQSYNTEKLD-QVP----QLKTELLALNQQVKYYSSDHYLQPLVVGDVWVSVGWSNEIIP 268
Query: 218 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 277
V + N+ VVP SG S+W+D+W P A + K S QW+ FC Q +
Sbjct: 269 LVTKNRNIKAVVPTSGTSIWSDVWVKPKAKESQNKL--------SETAKQWLNFCWQ-PQ 319
Query: 278 ALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 337
A ASP +L E++ N ++ + PA I +CEFL+PLS+
Sbjct: 320 AAKLISLFADAASPMIDRIDKKELSSEVI-------NNPLLFIDPA-IFEQCEFLQPLSK 371
Query: 338 ATLSDYEWLVADLQK 352
Y L D++K
Sbjct: 372 QVEEQYISLWQDVRK 386
>gi|443329204|ref|ZP_21057792.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
gi|442791149|gb|ELS00648.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
Length = 393
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 173/309 (55%), Gaps = 35/309 (11%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
ADLV++G+SWL AI + LI+P+ E W L +++ + ++ GKI+AA
Sbjct: 100 ADLVTLGNSWLENAIAEELIQPLDINELAGW-TSLDPRFQKLVTKD--------GKIYAA 150
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIE-----DWKDLWRPELAGRISMVNSPREVIGSVLKY 156
PYRWG VIAY+K K ++ N +E DW DLWRPELAG+IS++++ RE+IG LK
Sbjct: 151 PYRWGNTVIAYRKDKLQEFNKDRVEKLEITDWADLWRPELAGQISLLDNYREIIGLTLKK 210
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
+G SYNS+N+ +++ LA L Q + + ST YL+ +GD+W AVGWS+D+L
Sbjct: 211 LGHSYNSSNLT-----AITNLESELATLHQQVKFYSSTKYLQPLALGDLWAAVGWSTDIL 265
Query: 217 PAVKRMSN-VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
P V+R + + +VVP SG SLWADLW P IG RV + WI+FC Q
Sbjct: 266 PLVRRYPDKIGMVVPASGTSLWADLWVQPTVD----GSIGDRVERR---LASWIDFCWQD 318
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
+ A G SP + V+L +EL + ++L ++ + +F+EPL
Sbjct: 319 SSASTL-MLFTNGISPILNQENQVELTKELKNNQDFIQSSL-------KLFSNSDFIEPL 370
Query: 336 SEATLSDYE 344
+ +Y+
Sbjct: 371 TTEVTQEYQ 379
>gi|434384916|ref|YP_007095527.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
gi|428015906|gb|AFY92000.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
Length = 403
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 175/315 (55%), Gaps = 18/315 (5%)
Query: 34 AKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEID 93
A+ A Y+ +L S+GD+WLS AI+++LI+PI +W K L +W+ +R++ G
Sbjct: 95 AQGAEYIP-NLTSLGDAWLSRAIEQKLIQPIDTNNLTNWRK-LDSRWRELAQRDERGNSS 152
Query: 94 PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 153
G+IW PYRWGT VI Y++ K + N+ +DW DLW P+L RIS+++ REVIG
Sbjct: 153 STGQIWGVPYRWGTTVIIYRRDKLTEANIPLPQDWADLWNPQLRQRISLLDRSREVIGLT 212
Query: 154 LKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
LK +G SYN+ ++D +++Q LA L Q + + + HYL+ IGD WVAVGWS
Sbjct: 213 LKKLGYSYNAADLD-----RVLNLQTELAKLHQQVKFYSADHYLQPLVIGDTWVAVGWSL 267
Query: 214 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS--PLIHQWIEF 271
D +++ + VVP+SG ++ ADLW P+ S + + + L ++WI+
Sbjct: 268 DASELIQKNPQIGAVVPRSGTAISADLWVQPSLSPKLSPANRALLSNSNRLKLSNKWIDH 327
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
CLQ + + PGA+P +P ++ K ++ +P E+L + EF
Sbjct: 328 CLQPQSSNQIS-VLTPGAAPLLTNLNPNDIPPDVRKN--------LLTLPSKEVLDKSEF 378
Query: 332 LEPLSEATLSDYEWL 346
+ P+S T + ++ L
Sbjct: 379 IYPVSPTTKAQFDRL 393
>gi|16331125|ref|NP_441853.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|383322868|ref|YP_005383721.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|383326037|ref|YP_005386890.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|383491921|ref|YP_005409597.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|384437189|ref|YP_005651913.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|451815282|ref|YP_007451734.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|1653619|dbj|BAA18531.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|339274221|dbj|BAK50708.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|359272187|dbj|BAL29706.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|359275357|dbj|BAL32875.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|359278527|dbj|BAL36044.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|407961501|dbj|BAM54741.1| spermidine/putrescine-binding periplasmicprotein [Bacillus subtilis
BEST7613]
gi|451781251|gb|AGF52220.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
Length = 384
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 183/359 (50%), Gaps = 55/359 (15%)
Query: 4 QGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYM-----------AADLVSVGDSWL 52
Q K L F+ A++ + +NL N A ++ + A LV+ GD WL
Sbjct: 58 QAKELNFKA--IANLQSLFDNLQTWHNAQNADTSKGLWGSGSRANQTPKAQLVTGGDLWL 115
Query: 53 SFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAY 112
IK++LI+P + W L +W++ +RND G D GKIWA PYRWG +I Y
Sbjct: 116 ERVIKEKLIQPFVPDQLSQW-SSLPPRWQLLGQRNDQGLPDQSGKIWAVPYRWGPTMIIY 174
Query: 113 KKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAG 172
++ F P DW DLWRPEL RI++V+ PRE IG LK +G SYN N
Sbjct: 175 RQQPFADLGWQPT-DWSDLWRPELKQRIALVDDPREAIGLTLKKLGYSYNVTN-----PK 228
Query: 173 GKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKS 232
++ L LA Q + ++S +YL+A DVW+AVGWS+ ++P ++ S + V+P S
Sbjct: 229 AVNALPSALQELATQVKFYNSKYYLQALLNKDVWLAVGWSNQIIPLLRNQSELRAVIPSS 288
Query: 233 GASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPS 292
G SLWADLW +PA +E +I ++W+ F A PS
Sbjct: 289 GTSLWADLWTMPA--EMEAAEI----------TYEWLNFS----------------AQPS 320
Query: 293 ALE-----TTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 346
+LE + + +P + L+ + TN ++ P E+L RCEFL PL AT++ Y+ L
Sbjct: 321 SLEQMATFSNALAVPYQNLEVS-ALSTNPLLAFSP-ELLERCEFLAPLDIATVNQYKQL 377
>gi|359457473|ref|ZP_09246036.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
sp. CCMEE 5410]
Length = 371
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 165/315 (52%), Gaps = 38/315 (12%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
K+ + P + + L S+GD WL AI++ LI+P++ +D + + L+ +W+ +RR+ G
Sbjct: 84 KLPPEDKPKLPSRLASLGDYWLPQAIQQNLIQPLS-VDDLNRWSALAPQWQQLVRRDLQG 142
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
GKIW APYRWG +IA++K KFR P +DW DLWR EL G IS+ + PREVI
Sbjct: 143 NPSTEGKIWGAPYRWGATMIAFRKDKFRDLGWQP-QDWSDLWRSELKGHISLPDQPREVI 201
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKIS-VQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G LK +G SYN ++D IS + Q L L Q + S+ YL+ +GD W AV
Sbjct: 202 GLTLKKLGQSYNLEDLD------TISELPQTLKELNEQTLFYASSQYLEPLILGDTWAAV 255
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
GWSSD+LPA+ R ++ V+P SG++LWADLW Q+ PS I+QWI
Sbjct: 256 GWSSDILPALAREPDLDAVLPASGSALWADLWV----------QV-----QPSETINQWI 300
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
+ + A + SP T VK L P Q R
Sbjct: 301 NYWWEDTVANNLS-KFTDTISPLLSTTLPVKSQSHRLIAAPKQ-------------FERS 346
Query: 330 EFLEPLSEATLSDYE 344
EFL PLS +TL YE
Sbjct: 347 EFLLPLSPSTLQQYE 361
>gi|427711348|ref|YP_007059972.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
gi|427375477|gb|AFY59429.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
Length = 354
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 139/213 (65%), Gaps = 12/213 (5%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
FN+++A + +S+GD+WL AI+ + IEP+ + L +W+ ++RN+
Sbjct: 68 FNQLEADTP---TTQWLSLGDAWLKLAIETKTIEPLRTLPH---WANLEPRWQQLVQRNE 121
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
GE DP+GKIW PYRWGT V+AY+ + P +DW+DLW+PEL ++S++N PRE
Sbjct: 122 RGEPDPQGKIWGLPYRWGTTVMAYRADLIQPTGWWP-QDWEDLWKPELTQKLSLLNQPRE 180
Query: 149 VIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
VIG VLK +G SYN+ +I+ QV+G K ++++ L Q R F ST YL++ +GD W+A
Sbjct: 181 VIGLVLKKLGQSYNTADIN-QVSGLKPALEE----LRQQTRFFASTDYLQSLIMGDTWIA 235
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 241
WS+D+LP + R SN+ +VPKSG +LWAD W
Sbjct: 236 QAWSTDILPILNRYSNIKAIVPKSGTALWADCW 268
>gi|158338236|ref|YP_001519413.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
gi|158308477|gb|ABW30094.1| ABC transporter, periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
Length = 371
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 167/319 (52%), Gaps = 46/319 (14%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
KV ++ P + + L S+GD WL AI++ LI+P++ A+D + + L+ +W+ +RR+ G
Sbjct: 84 KVPSEDQPKLPSRLASLGDYWLPQAIQQNLIQPLS-ADDLNRWSALAPQWQQLVRRDLQG 142
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
GKIW APYRWG +IA++K KFR P +DW DLWR EL IS+++ PREVI
Sbjct: 143 NPSAEGKIWGAPYRWGATMIAFRKDKFRDLGWQP-QDWSDLWRSELKEHISLLDQPREVI 201
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKIS-VQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G LK +G SYN ++D IS + Q L L Q + S+ YL+ +GD W AV
Sbjct: 202 GLTLKKLGQSYNLEDLD------TISELPQTLKELNEQTLFYASSQYLEPLILGDTWAAV 255
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
GWSSD+LP + R ++ V P SG++LWADLW Q+ PS I+QWI
Sbjct: 256 GWSSDILPTLAREPDLEAVFPASGSALWADLWV----------QV-----QPSETINQWI 300
Query: 270 EFCLQTARA---LPFKQEVIPGASPSALETTL-VKLPEELLKGKPSQDTNLIVGVPPAEI 325
+ + A F + P L TTL VK L P Q
Sbjct: 301 NYWWEDTVANNLSKFTDTISP-----LLSTTLPVKSQSHRLVAAPKQ------------- 342
Query: 326 LARCEFLEPLSEATLSDYE 344
R EFL PLS TL YE
Sbjct: 343 FERSEFLFPLSPPTLQQYE 361
>gi|170076941|ref|YP_001733579.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
gi|169884610|gb|ACA98323.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
Length = 377
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 140/249 (56%), Gaps = 19/249 (7%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DL+++G W AI ++P++ E W + L W+ +LRRN GEIDP+G++W P
Sbjct: 96 DLLTLGHGWYQQAIALGFVQPLSLEELTRW-EELGEPWQRFLRRNVQGEIDPQGQLWGQP 154
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
YRWGT ++ Y+K K + P DW DLWRPEL G+IS++N REV+G +LK G SYN
Sbjct: 155 YRWGTTMLVYRKDKLKNLGWTPT-DWADLWRPELQGKISLLNQSREVLGLLLKKQGKSYN 213
Query: 163 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 222
+ + +++ + L Q + + STHYL+ +GD W+A GWS D+LP ++R
Sbjct: 214 ETDPE-----AIANLESDFQTLHRQVKFYSSTHYLQPLNMGDTWIAQGWSQDILPLLQRY 268
Query: 223 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 282
N+ V+P SG +LW DLW P S+ + + W++FC + A A+
Sbjct: 269 RNLGAVIPASGTALWCDLWVQPQRSQTSFE-----------TLKTWLDFCWEPA-AIQQI 316
Query: 283 QEVIPGASP 291
GASP
Sbjct: 317 SRSSHGASP 325
>gi|443323260|ref|ZP_21052268.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
gi|442786998|gb|ELR96723.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
Length = 374
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 167/302 (55%), Gaps = 31/302 (10%)
Query: 44 LVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPY 103
LV++GD+WL AI ++LI+P+ E +W + L ++ ++RN G +DP+G+IW APY
Sbjct: 79 LVTLGDTWLEQAIPQKLIQPLVIEELSNW-QQLPSAYQELVKRNSQGYVDPQGEIWGAPY 137
Query: 104 RWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS 163
RWGT +IAY+ + ++ + P +DW DLW+ L RIS+ REVIG LK +G SYN
Sbjct: 138 RWGTTMIAYRSDRLKEVGIVP-QDWSDLWQSALKERISLPAHSREVIGLTLKKLGYSYNQ 196
Query: 164 NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 223
N+ + + L L Q + + S YL+ GD W+AVGWS+D++P S
Sbjct: 197 TNL-----AAIPELPKELERLNQQVKFYSSDAYLQPLIKGDTWLAVGWSTDIIPVANNYS 251
Query: 224 NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ--TARALPF 281
N+ V+P SG SLW DLW A ++ ++ LI WI+FC Q +A A+
Sbjct: 252 NIEAVIPPSGTSLWVDLWVKSALTQPTAPEV--------ELIKGWIDFCWQPRSAEAISL 303
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
+ ASP L + EL K KP + +P EIL++ EFL PL+ TL+
Sbjct: 304 ---LTNAASPVILNAPVSG---ELTK-KP-------LVIPSPEILSKSEFLLPLNMETLA 349
Query: 342 DY 343
++
Sbjct: 350 EH 351
>gi|145355770|ref|XP_001422123.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
gi|144582363|gb|ABP00440.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
Length = 388
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 181/349 (51%), Gaps = 26/349 (7%)
Query: 2 RSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLI 61
R+Q R+KF+M AS+ I +L+ K + AD ++GD WL+ AI LI
Sbjct: 49 RTQTNRVKFKMTAVASVGEIYGSLARGGKKTRG-------ADATTLGDEWLAPAIANGLI 101
Query: 62 EPIAGAEDQDWFKCLSHKWKVYLRRN-DAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
PI GAE WF LS W+ +RR+ G + G+I+ APY +G VIAY+K K K
Sbjct: 102 RPIPGAESSAWFARLSPVWRTLVRRDARTGRVSAGGEIYGAPYGFGCAVIAYRKDKLPK- 160
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
+ P DW+DL+ P L G I M N+PR V+ + LK G S N++ D+ A G++S +
Sbjct: 161 GVKPPRDWEDLFDPRLKGLIGMPNAPRLVLSAALKAEGMSANAS--DIGGADGRVSAR-- 216
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
+ L ++FD Y +A GD V +G S DV +R + + + VP SG +LW+D
Sbjct: 217 VRALRENVKVFDDLQYTQAIACGDCAVVIGPSEDVFSVARRSTLIGLAVPSSGTTLWSDC 276
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP-----SALE 295
W +P A+ + + GPSP++ QWI++ LQ AR + + + G SP ++
Sbjct: 277 WVVPTAT------VANKGGGPSPVLEQWIDYTLQPAR-VNMRVGLKGGISPLMFDGRGVD 329
Query: 296 TTLVKLPEELLKGKPSQDTNLIVG-VPPAEILARCEFLEPLSEATLSDY 343
+ P S D +++ G +P + + EF PLS+ + Y
Sbjct: 330 GGYARYPNVARPVLGSDDGDMLKGWIPDDSVWSASEFQLPLSDRARAQY 378
>gi|126660470|ref|ZP_01731578.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
gi|126618229|gb|EAZ88990.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
Length = 387
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 164/306 (53%), Gaps = 27/306 (8%)
Query: 38 PYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGK 97
P +D V++GD WL+ AIKK LIEP+ + ++W K L +W+ ++RN G++ G
Sbjct: 99 PPSLSDFVTLGDIWLADAIKKDLIEPLNLTQVENWDK-LPSRWQTLVKRNKQGQLQDNGL 157
Query: 98 IWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 157
IW APYRWGT +IAY+ K + P +DW DLW L+ RISMV+ REVIG LKY+
Sbjct: 158 IWGAPYRWGTTLIAYRSDKL---DWQP-QDWSDLWDQRLSDRISMVDQYREVIGLTLKYL 213
Query: 158 GASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLP 217
G SYN+ N+ QV ++ L L Q + + S HYL+ +GDV V+VGWS++++P
Sbjct: 214 GHSYNTENL-AQVP----QLKTELLALNEQVKYYSSDHYLQPLLVGDVDVSVGWSNEIIP 268
Query: 218 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 277
+ + N+ VVP SG SLW+D+W P + + S QW+ FC Q +
Sbjct: 269 LITKNRNIKAVVPTSGTSLWSDIWVKPKVKEGQNEL--------SETAKQWLNFCWQ-PQ 319
Query: 278 ALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 337
A ASP ++ E++ N ++ + I +CEFLEPLS
Sbjct: 320 AAKIISLFADAASPMIDRIDKKEVSPEIM-------NNPLLFIDET-IFEQCEFLEPLST 371
Query: 338 ATLSDY 343
Y
Sbjct: 372 EVQEQY 377
>gi|284929800|ref|YP_003422322.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
gi|284810244|gb|ADB95941.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
Length = 385
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 163/302 (53%), Gaps = 28/302 (9%)
Query: 42 ADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAA 101
+DLV++GDSWL+ AI+K LI+PI + +W K S+ W+ + R+ G + G +W A
Sbjct: 101 SDLVTLGDSWLTQAIQKDLIQPITISSWHNWHKLPSY-WQNLVIRDQNGIPNKNGFVWGA 159
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PYRWGT +IAY+ K I+DW DLW P+L RIS+V+ PREVIG LK + SY
Sbjct: 160 PYRWGTTLIAYRADKLD----GEIKDWSDLWDPKLENRISLVDQPREVIGLTLKKLNKSY 215
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
N+ N+ ++ L Q + ++S +YL+ +G+VW +VGWS+D++P + R
Sbjct: 216 NTKNL-----KNIPQLRSELQAFNKQVKYYNSQYYLQPLLMGEVWASVGWSNDIIPILSR 270
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
N+ V+P SG SLW+D+W P + + T S + +WI FC + +
Sbjct: 271 NRNIKAVIPSSGTSLWSDIWVAPKNNNISTL---------SEIAQRWINFCWE-PEMVNL 320
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS 341
+SP +L E++ N ++ + P+ I +C+F+EPLS
Sbjct: 321 ISLFTNASSPMINNLNNKQLFPEVI-------NNPLLCLQPS-IFNKCDFIEPLSIEEQK 372
Query: 342 DY 343
+Y
Sbjct: 373 EY 374
>gi|307111783|gb|EFN60017.1| hypothetical protein CHLNCDRAFT_9420, partial [Chlorella
variabilis]
Length = 204
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 132/206 (64%), Gaps = 5/206 (2%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D V++GD+WL AI + LI+PI A W+ L +W+ + R+ AG+ DPRG++WAAP
Sbjct: 1 DAVTLGDTWLQRAIAEGLIQPIPDARQYRWWAALYPRWQQLVCRDGAGQPDPRGEVWAAP 60
Query: 103 YRWGTMVIAYKKSKFRKHN---LAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 159
YRWG ++AY++ K + + API DW DL +P+L GR++ ++SPR+V+G+ LK +G
Sbjct: 61 YRWGATLVAYRRDKLGRADGGGGAPIRDWSDLLQPQLKGRVAFMDSPRDVVGAALKTLGL 120
Query: 160 SYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 219
YNS+ D++ G +S Q + R+F S+ +L+A G GDV VGWS D+LP V
Sbjct: 121 GYNSSAADIRRCG--LSEQDVRTRVQRLVRVFSSSDHLRALGAGDVDAVVGWSDDLLPLV 178
Query: 220 KRMSNVAVVVPKSGASLWADLWAIPA 245
R +N+ P SG SL+AD W IPA
Sbjct: 179 LRTNNLEAAAPLSGTSLFADCWCIPA 204
>gi|428220899|ref|YP_007105069.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
gi|427994239|gb|AFY72934.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
Length = 357
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 159/321 (49%), Gaps = 39/321 (12%)
Query: 32 VKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGE 91
+K P D+ S+GD+WL AI + LI P+ W + LS WK + RN
Sbjct: 75 LKDTVEPVKVPDVASLGDAWLDLAIAQHLISPLTITSIPQW-QNLSPLWKQAVTRN---- 129
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
GK+W PYRWG IAY+ K PI W DLWR EL G+I++ N PREVIG
Sbjct: 130 ----GKVWGIPYRWGLTAIAYRSDKLD----IPINGWADLWRTELKGKITLPNDPREVIG 181
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
LK +G SYN+ NI + L L Q + S YL+ IGD W+AVGW
Sbjct: 182 LTLKKLGYSYNTANIK-----AIAPLTPALQALNQQVLTYTSDSYLQPLLIGDSWLAVGW 236
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
S D++ ++ S++ VV+P G +LW+DLW P QI G W++
Sbjct: 237 SQDIVNTAEQNSDIKVVIPAEGTALWSDLWVFPQRVNRPENQIFG---------QDWLDL 287
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
CL A A ++ +A L KLP+ + T+ I+ PP +ILA+ E
Sbjct: 288 CLTPAIA----NQITALTDATATNPDLGKLPKSV--------TSNILKFPPDQILAKSEL 335
Query: 332 LEPLSEATLSDYEWLVADLQK 352
+ PLSE + +Y+ L +L++
Sbjct: 336 ILPLSETSNQEYKQLWENLRQ 356
>gi|220909337|ref|YP_002484648.1| ABC transporter periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
gi|219865948|gb|ACL46287.1| ABC transporter, periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
Length = 377
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 171/324 (52%), Gaps = 44/324 (13%)
Query: 41 AADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRN------DAGEIDP 94
A LVS+GD WL A +++LI+P+ A+ + W + L +W+ ++R
Sbjct: 85 TAPLVSLGDYWLVSAQQQKLIQPLDPAQLRHW-QQLPERWQQLVQRGSQQTPAQPARTAI 143
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
+ ++W APYRWG VIAY+K KF + P DW+DLWR L R+S+++ PREVIG L
Sbjct: 144 KQEVWGAPYRWGMTVIAYRKDKFEQLGWLPA-DWQDLWRSPLRHRLSLLDHPREVIGLTL 202
Query: 155 KYMGASYNSNNIDLQVAGGKIS-VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
K +G SYN+N A KI+ +++ LA L QA + S YL+ +GD W AVGWS+
Sbjct: 203 KKLGYSYNTN------APAKIADLERELAQLNRQALFYSSDTYLQPLVLGDTWAAVGWST 256
Query: 214 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP---LIHQWIE 270
DVLP ++R + V+VP+SG +LWAD+W PA + P P L + W++
Sbjct: 257 DVLPLMRRNDKIGVIVPRSGTALWADVWVRPA------------LEIPPPAVALQNSWMD 304
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
+ Q A A Q L L +L P++ L P + R E
Sbjct: 305 YWWQPAIANALSQ----------FSDALSPLLTDLQPNGPAKKLLL----PDQPLFERSE 350
Query: 331 FLEPLSEATLSDYEWLVADLQKPA 354
FL PLS+ + +Y+ L +++P+
Sbjct: 351 FLLPLSKTAIEEYDTLWTQMRQPS 374
>gi|81301075|ref|YP_401283.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
gi|81169956|gb|ABB58296.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
Length = 354
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 173/341 (50%), Gaps = 42/341 (12%)
Query: 6 KRLKFQMNLCASID---GIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIE 62
+R + + + +D G+V++ +++ P +L+ +GD+WL AI +
Sbjct: 43 RRFQDRTQITVQLDRAAGLVDS-----SRLLLTEDPSRLPNLLGIGDAWLQSAIASGRLA 97
Query: 63 PIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNL 122
P + W L +W+ LRR+ G G+IWAAPYRWGT +IA+++ +
Sbjct: 98 PFNPNHWRHW-TSLPQRWRQQLRRDRQGVPSEAGEIWAAPYRWGTTMIAFRRDRL----T 152
Query: 123 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 182
+P++DW DLWRPEL G++ + + PREVIG LK +G SYN N+ ++ LA
Sbjct: 153 SPLQDWTDLWRPELRGQLILPDDPREVIGLTLKRLGWSYNQANL-----AEIPQLEPLLA 207
Query: 183 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 242
L Q +L+ S +YL+ +GD AVGWS+D+L A++R S +A VVP+SG ++W DLW
Sbjct: 208 ALQQQVKLYSSRNYLQPLLLGDALAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWV 267
Query: 243 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 302
P GRV +WI+F A F Q + P ASP+ L V
Sbjct: 268 QPQ----------GRVS--EVFSDRWIDFGWAPTIATQFSQ-LGPAASPAILTAAAVA-- 312
Query: 303 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 343
+ P Q +PP +L + E + PL EA Y
Sbjct: 313 --PVDANPLQ-------IPPTAVLDKSELILPLPEAVRDRY 344
>gi|56751841|ref|YP_172542.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus elongatus PCC 6301]
gi|56686800|dbj|BAD80022.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 6301]
Length = 342
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 173/341 (50%), Gaps = 42/341 (12%)
Query: 6 KRLKFQMNLCASID---GIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIE 62
+R + + + +D G+V++ +++ P +L+ +GD+WL AI +
Sbjct: 31 RRFQDRTQITVQLDRAAGLVDS-----SRLLLTEDPSRLPNLLGIGDAWLQSAIASGRLA 85
Query: 63 PIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNL 122
P + W L +W+ LRR+ G G+IWAAPYRWGT +IA+++ +
Sbjct: 86 PFNPNHWRHW-TSLPQRWRQQLRRDRQGVPSEAGEIWAAPYRWGTTMIAFRRDRL----T 140
Query: 123 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 182
+P++DW DLWRPEL G++ + + PREVIG LK +G SYN N+ ++ LA
Sbjct: 141 SPLQDWTDLWRPELRGQLILPDDPREVIGLTLKRLGWSYNQANL-----AEIPQLEPLLA 195
Query: 183 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 242
L Q +L+ S +YL+ +GD AVGWS+D+L A++R S +A VVP+SG ++W DLW
Sbjct: 196 ALQQQVKLYSSRNYLQPLLLGDALAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWV 255
Query: 243 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 302
P GRV +WI+F A F Q + P ASP+ L V
Sbjct: 256 QPQ----------GRVS--EVFSDRWIDFGWAPTIATQFSQ-LGPAASPAILTAAAVA-- 300
Query: 303 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 343
+ P Q +PP +L + E + PL EA Y
Sbjct: 301 --PVDANPLQ-------IPPTAVLDKSELILPLPEAVRDRY 332
>gi|427419007|ref|ZP_18909190.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425761720|gb|EKV02573.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 380
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 160/314 (50%), Gaps = 42/314 (13%)
Query: 38 PYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGK 97
P + A LV++ D WL AI++ LI+P+ D L W+ LRR+ G RGK
Sbjct: 99 PPVGAHLVTLSDPWLEHAIRQDLIQPLP---DFPLAYALPEPWQKLLRRDREGYSSERGK 155
Query: 98 IWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKY 156
+WA PYR ++IAY+K F+ + N PI W DLWRPELAGRI+M N PR I VLK
Sbjct: 156 LWAVPYRTQGLMIAYQKPIFQTNTNNKPITKWADLWRPELAGRIAMPNQPRLAIAIVLKA 215
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
+G S N + LQ VQ+ L L Q ++FDS YLKA DVW+AVGWS D+L
Sbjct: 216 LGYSVNDEAVLLQ-----DDVQEQLLALYRQVKVFDSQAYLKALVNEDVWLAVGWSGDIL 270
Query: 217 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTA 276
+ R + V P+ G L +DLW P ++L + W+EFC Q
Sbjct: 271 ATLVRYRRLGAVHPQEGTVLTSDLWVAPTDAKLTEE------------AQAWMEFCWQ-- 316
Query: 277 RALPFKQEVIP---GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLE 333
+P E+ G SPS VK+PE+L SQ T L+ G E L
Sbjct: 317 --MPIATEISVSSYGVSPSFFLPD-VKVPEQL-----SQQTLLVPG--------HGEVLL 360
Query: 334 PLSEATLSDYEWLV 347
PLS+ ++ E L+
Sbjct: 361 PLSKRGQTNVETLL 374
>gi|308813680|ref|XP_003084146.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
gi|116056029|emb|CAL58562.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
Length = 429
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 172/349 (49%), Gaps = 24/349 (6%)
Query: 2 RSQGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLI 61
++Q +R+K +++ SI L P ++ K D ++GD WL AI++ LI
Sbjct: 92 QTQTRRVKLELSTTPSIARSYEELLRPGKRIGKK-----GIDCATLGDEWLRPAIERGLI 146
Query: 62 EPIAGAEDQDWFKCLSHKWKVYLRRN-DAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH 120
PI AE W+ + W+ +RR+ +G + G I+ APYR+G + IAY+K K K
Sbjct: 147 LPIPNAERSAWWNAIPPVWRQLVRRDPRSGLLSSSGDIFGAPYRFGCVTIAYRKDKLPK- 205
Query: 121 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 180
+ P DW DL+ P L G I M N+PR V+ + LK G S N + V G V
Sbjct: 206 GVKPPTDWSDLFDPRLQGMIGMPNAPRLVLSAALKAEGMSVNVGD----VGGVDGRVSAR 261
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 240
+ L ++FD YL+A GD V VG S DV +R + + VVP+SG +LW+D
Sbjct: 262 VRQLRESVKVFDDLQYLQALACGDCAVVVGPSEDVFSVARRSTLIVPVVPRSGTTLWSDC 321
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP-----SALE 295
W +P S +GG GPSP + QWI + L AR + + + G SP +E
Sbjct: 322 WVVPTTS---VTNVGG---GPSPALEQWINYTLSPAR-VNMRVGLKGGISPLMFDGRGIE 374
Query: 296 TTLVKLPEELLKGKPSQDTNLIVG-VPPAEILARCEFLEPLSEATLSDY 343
+ + P + D +++ G +P + A EF PL++ + Y
Sbjct: 375 SGYARYPNVARPVLGTSDEDMLKGWIPDDSVWAASEFQLPLTDRVRAQY 423
>gi|428297544|ref|YP_007135850.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428234088|gb|AFY99877.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 387
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 135/241 (56%), Gaps = 17/241 (7%)
Query: 34 AKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEID 93
S + DLV++GDS+L AI +RLI P+ + W L +W+ + R+D G
Sbjct: 96 GNSETKVPGDLVTLGDSYLQDAIARRLIRPLDVGKLPQW-SSLPSRWQELVTRDDRGFPS 154
Query: 94 PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSV 153
+GK+WAAPYRWG+ ++ Y++ KF L +DW DLWR +L R+S+++ PRE+IG
Sbjct: 155 SQGKVWAAPYRWGSTMMIYRRDKFADLGLKAPQDWSDLWRDDLRNRVSLLDHPREIIGLT 214
Query: 154 LKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
LK +G SYN+ ++ ++ L L + +DS+ YL+ +GD ++ GWS
Sbjct: 215 LKKLGKSYNTQDL-----STVPQLEAELQSLNKNVKFYDSSKYLEPLLLGDTLISTGWSH 269
Query: 214 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL 273
D+LP + R ++ +VP+SG ++WAD+W P S+ + L+ QWI F
Sbjct: 270 DILPVMTRYPQLSAIVPESGTAIWADMWVNPINSQNQVD-----------LLSQWINFYW 318
Query: 274 Q 274
Q
Sbjct: 319 Q 319
>gi|427724862|ref|YP_007072139.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427356582|gb|AFY39305.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 374
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 148/291 (50%), Gaps = 31/291 (10%)
Query: 38 PYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGK 97
P +A DLV++G+ W AI L++P+A + + W + L W+ ++ GK
Sbjct: 95 PPIAPDLVTIGNGWFKEAIAAELLQPLAVDQLETW-QDLDEPWRTFIEEQS-------GK 146
Query: 98 IWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYM 157
+ PYRWGT ++ Y+K K +K + + DW+DLWR EL +IS+++ REVIG VLK
Sbjct: 147 TYGIPYRWGTTLLLYRKDKLKKFDWQ-LTDWEDLWREELKNKISLLDHSREVIGFVLKNF 205
Query: 158 GASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLP 217
G SYN + + +AG + + L LL + + STHYL+ GD WVA WS D L
Sbjct: 206 GFSYNDKDPEA-IAG----LSEELGLLHRNVKFYSSTHYLQPLITGDTWVAQAWSQDALS 260
Query: 218 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 277
+KR N+ VVPKSG +LW DLW P S E + W+EFC
Sbjct: 261 LMKRYRNLGAVVPKSGTALWCDLWVQPKKSEREFAD-----------LKPWLEFCANERA 309
Query: 278 ALPFKQEVIPGASP-----SALETTLVKLPEELLKGKPSQDTNLIVGVPPA 323
F Q ASP L+ + + P + + Q++ +I +PP+
Sbjct: 310 INQFAQSTF-AASPLIYQTENLDAKVTENPLIFVNPETYQNSEIIETLPPS 359
>gi|428217472|ref|YP_007101937.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989254|gb|AFY69509.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 419
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 161/326 (49%), Gaps = 46/326 (14%)
Query: 33 KAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAE---DQDWFKCLSHKWKVYLRRNDA 89
K +A DLVS+ D+WL AI + LI PI A+ W K L W+ + RN
Sbjct: 133 KTNAAQRKVPDLVSLSDAWLDAAIAQDLIRPIPAADLAKISQWPK-LEPNWQASVTRN-- 189
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYK--KSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPR 147
G++W PYRWG+ VIAY+ ++KF I+ W DLWRPEL RI + +SPR
Sbjct: 190 ------GQVWGVPYRWGSTVIAYRPDRTKFE------IKSWADLWRPELKRRIVLPDSPR 237
Query: 148 EVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
EVIG VLK +G SYN+ N++ A + L L Q + S YL+ I D W
Sbjct: 238 EVIGLVLKKLGDSYNNENLNAIAA-----LPTELEQLHQQVLFYSSDRYLQPLIIEDAWA 292
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
VGWS D+ + R + VVVP+ G +LW+D+W +P T S ++
Sbjct: 293 VVGWSHDIEAQIDRQPKLRVVVPEEGTALWSDIWVLPKQQPRPTN---------SQAAYK 343
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
WI + L A A +AL + +P + P++ + P E++A
Sbjct: 344 WINYTLSPAIANQI----------TALTDAVSTMP--VNADLPAKIRANQLKFPSPEVIA 391
Query: 328 RCEFLEPLSEATLSDYEWLVADLQKP 353
+ E L+PLS+ LS+Y L +L+ P
Sbjct: 392 KSELLQPLSDDALSEYLALWQELRSP 417
>gi|443316967|ref|ZP_21046392.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783430|gb|ELR93345.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 393
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 38/359 (10%)
Query: 2 RSQGKRLKFQMNLCASIDGIVNNL-----SVPFNKVK---AKSAPYMAADLVSVGDSWLS 53
R+Q + L F+ + ++ + L +P +++ + + VS+G+ WL+
Sbjct: 47 RTQSQSLGFKSEVQGNLADLYRQLQRLQTGIPSPRIRLPWTEPPDQRVPNWVSLGNDWLA 106
Query: 54 FAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYK 113
AI+++LI+P A+ W LS +W + R+ G G +WAAPYRWG +V+ Y
Sbjct: 107 GAIQQKLIQPFGVADLPHW-PALSERWHTLVTRDIQGFPAANGSVWAAPYRWGALVMLYN 165
Query: 114 KSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGG 173
++ F P + W DLWR ELAGR+ + PR ++G +LK + S N + QVA
Sbjct: 166 RAPFEALGWQP-QSWTDLWRSELAGRVILPRHPRLLLGIILKSLEESANHPD-PTQVAEL 223
Query: 174 KISVQQNLALLANQARL-----FDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 228
+ N A F THY++ G+ WVAVGWS+++ P ++ +A V
Sbjct: 224 GARMAAMAGAKPNPAGTSPALTFADTHYIEPLIRGEAWVAVGWSTEIRPVLEGYRQLAAV 283
Query: 229 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALP---FKQEV 285
VP+ G L ADLW PA Q G R+ +P WI++ Q ALP F Q
Sbjct: 284 VPEPGTLLSADLWVHPA------PQQGARMPLSAP-EQAWIDYWWQENTALPLTLFSQ-- 334
Query: 286 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 344
G +P L+ T+ L + + + +P EI+A EFL PL+ +L+ YE
Sbjct: 335 --GLAPQLLDGTIGDLTPDFSAAQ--------LLLPEGEIMANSEFLLPLAADSLAQYE 383
>gi|302829761|ref|XP_002946447.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
gi|300268193|gb|EFJ52374.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
Length = 561
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 46/315 (14%)
Query: 5 GKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPI 64
GK F ++ + I LS + K + AD++++GD W+ AI++ L++PI
Sbjct: 113 GKYCGFSLDQRMQLADIFKELSDTSGENKRSAG---LADVITLGDIWMGAAIQRGLLQPI 169
Query: 65 AGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP 124
GA W++ L + + RN AG DP G+++ AY++ + + P
Sbjct: 170 PGATSSRWYRMLPQRLRQLGHRNAAGMPDPTGEVY-----------AYRRDRLLRRGGRP 218
Query: 125 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA-----------------------SY 161
I DW DL +P LAGR++M++SPRE++ + ++ + A S
Sbjct: 219 ILDWCDLLQPALAGRVAMLDSPRELLAAAVRSLAAENAGLGDGGGRGVDGGKSGRAWVSV 278
Query: 162 NSNNIDLQVAGGKISV-QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 220
N++ +L AG V Q +A Q RLF S +++A GDVW VG+S +++ +
Sbjct: 279 NASARELAAAGISEEVLQGRVAAFRRQVRLFSSQDHVRALQAGDVWAVVGYSQELVQLAE 338
Query: 221 RM-SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARAL 279
R S++ ++ P SG LWAD+WA+PA +R G R GPSPL+ WIEF L R
Sbjct: 339 RSGSSIELLAPLSGTQLWADVWAVPAGAR-----GGHRHSGPSPLLPVWIEFTLSPGRIT 393
Query: 280 PFKQEVIPGASPSAL 294
Q + G +P+AL
Sbjct: 394 --GQPSLKGGAPAAL 406
>gi|255073983|ref|XP_002500666.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226515929|gb|ACO61924.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 580
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 176/382 (46%), Gaps = 77/382 (20%)
Query: 30 NKVKAKSAP-YMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQ-DWFKCLSHKWKVYLRRN 87
+K K+K AP Y+ AD+VSVGD +L+ A+ + L+ P+ + Q +W+ L + W+ R+
Sbjct: 191 DKKKSKGAPKYLKADVVSVGDEFLAAAVTRGLVLPLDPSVVQNEWYARLPYAWRELATRD 250
Query: 88 --------------------------DAGEIDPRGK--IWAAPYRWGTMVIAYKKSKFRK 119
G+ D K ++ PYRWG +IAY+K K
Sbjct: 251 PRTGYPSAPAPPAPPGRYPNTTAVVYTNGDPDQTAKPAMYGVPYRWGCTLIAYRKDKLPA 310
Query: 120 H-NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 178
P DW DLWRPE R+ M + PR+++ + L+ G S N++ GG +V+
Sbjct: 311 SLRERPPRDWDDLWRPEFKRRVGMGSGPRQMLTAALRAEGMSANADGW-----GGGGNVR 365
Query: 179 QNLALLANQARLF-DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLW 237
L L + L D YL+A G GD W+AVG S DVL ++ S + VVVP SG +L+
Sbjct: 366 ARLESLRREQLLIQDDVQYLQALGNGDAWIAVGNSDDVLSMARKSSLIGVVVPMSGTTLF 425
Query: 238 ADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETT 297
AD+W +PA++ ++ GG SPL +QW ++ Q AR + + + G SP +
Sbjct: 426 ADVWCVPASA---ARKPGGV----SPLTNQWFDYTTQPAR-VNLRVGLRGGVSPIVFDGG 477
Query: 298 LVKLPEELLKG--------KPSQDTN------------------------LIVGVPPAEI 325
+ + G + D N + G+PP E+
Sbjct: 478 GIDYASIGMNGPTGGFVDYDAAGDKNGTRGMGAKIKDFLSRDEKNRGGEIMQGGMPPDEV 537
Query: 326 LARCEFLEPLSEATLSDYEWLV 347
AR EFL PLS Y L+
Sbjct: 538 WARSEFLYPLSPRIKDQYNELM 559
>gi|443476073|ref|ZP_21065996.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443018979|gb|ELS33141.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 361
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 156/304 (51%), Gaps = 42/304 (13%)
Query: 44 LVSVGDSWLSFAIKKRLIEPIA-GAEDQ--DWFKCLSHKWKVYLRRNDAGEIDPRGKIWA 100
LVS+GDSWL AI + L++PIA D+ W K LS W+ + RN+ ++W
Sbjct: 86 LVSLGDSWLDPAIAQSLVQPIAPNLLDKIPQWQK-LSPFWQQSVTRNN--------QVWG 136
Query: 101 APYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 160
PYRWG IAY+ K + I W DLWRPEL ++S+ + REVIG VLK MG S
Sbjct: 137 VPYRWGATAIAYRSDKLKFD----ITQWSDLWRPELKQKLSLPDDAREVIGLVLKKMGQS 192
Query: 161 YNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 220
Y +N+ + ++ Q+L L++Q + S +YL++ D AVGW+SD+ K
Sbjct: 193 YQVDNL-AERKDIFTALIQDLKSLSSQVLTYSSDNYLQSLLNTDTLAAVGWTSDMYKTAK 251
Query: 221 RMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALP 280
+ N+ VV+P+ G +LW+D+W IP G V + W+ FCL A+
Sbjct: 252 QNPNLKVVIPQDGTALWSDIWVIPK----------GEVAIAA---TAWMNFCLTPEIAIQ 298
Query: 281 FKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 340
+ SPS + L K+P +K P + +ILA+ E + PLS TL
Sbjct: 299 LT-SLTDAVSPS---SALDKVPNS-VKADP-------IKFFSQDILAKSELILPLSPTTL 346
Query: 341 SDYE 344
+ Y+
Sbjct: 347 TQYK 350
>gi|86609220|ref|YP_477982.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557762|gb|ABD02719.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 383
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 121/263 (46%), Gaps = 33/263 (12%)
Query: 92 IDPR--------GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
+DPR G+IW P+RWG IAY++ + R+ PI DW DLWRPELAG++++
Sbjct: 131 LDPRWQAAALREGQIWGVPWRWGVTAIAYRRDRVRE----PIRDWADLWRPELAGKLTLP 186
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
+ PREVIG LK MG SYN + + ++Q L L Q + S+ YL +
Sbjct: 187 DHPREVIGLTLKKMGRSYND-----PLNPEDVELRQELGSLHRQVLTYTSSDYLPILRLA 241
Query: 204 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA---SRLETKQIGGRVRG 260
D WVAVGWS D+ +AVV+P SG+++W D+W P + +
Sbjct: 242 DSWVAVGWSQDLYATQANYPELAVVIPASGSAIWWDVWVRPHVEDHAHEDNAHTESTQTD 301
Query: 261 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
L+ W++F L A + V PS L L +L L + Q +
Sbjct: 302 SGSLLADWLDFVLNPEFA---PRLVNLSGIPSVLPLDLAQLAPRLQRRADLQIST----- 353
Query: 321 PPAEILARCEFLEPLSEATLSDY 343
R E PLS A Y
Sbjct: 354 -----WQRSEIWRPLSSAEAESY 371
>gi|86605920|ref|YP_474683.1| polyamine ABC transporter polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
gi|86554462|gb|ABC99420.1| polyamine ABC transporter, polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
Length = 374
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 120/233 (51%), Gaps = 23/233 (9%)
Query: 41 AADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWA 100
AA L +G L AI ++P+ + ++ L +W+ RR G+IW
Sbjct: 96 AAALSLLGADVLDRAIAAGWLDPLPPDLLGERWQHLDRRWQAAARRE--------GQIWG 147
Query: 101 APYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS 160
P+RWG IAY++ + PI DW DLWRPELAG++++ + PREVIG VLK +G S
Sbjct: 148 VPWRWGVTAIAYRRDRVSD----PIRDWADLWRPELAGKLTLPDHPREVIGLVLKKLGRS 203
Query: 161 YNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 220
YN + +D + A +++ L L Q + S YL + D WVAVGWS D+
Sbjct: 204 YN-DPLDPEEA----ELRRELGSLHRQVLAYTSADYLPMLRLADSWVAVGWSQDLYATQA 258
Query: 221 RMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL 273
+ V +P SG+++W D+W P + + ++ G L+ WI+F L
Sbjct: 259 NYPELEVAIPASGSAIWWDVWVRPHRAHNASPELEGS------LLADWIDFVL 305
>gi|254421830|ref|ZP_05035548.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
gi|196189319|gb|EDX84283.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
Length = 393
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 142/305 (46%), Gaps = 36/305 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
+LVS+ D WL+ AI + LIEP++ L KW+ + RR+ G+I G++W+ P
Sbjct: 92 NLVSLADYWLTEAIVQDLIEPLSIPTTS--LDLLPSKWQAFGRRDHTGQITSDGELWSVP 149
Query: 103 YRWGTMVIAYKKSKF---RKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 159
Y+ +V+ Y+ S+F + P W+DL P+L+ I++ + PR +I + K
Sbjct: 150 YKLQPLVVVYRHSQFLAKSRTGKQPFSSWQDLLAPDLSRSIALPSHPRILISLLQKLQTG 209
Query: 160 SYNSNNIDLQVAGGKISVQQN------LALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
S+N + D V+ ++ Q N A L Q + +DS LKA DV V VGWSS
Sbjct: 210 SFNPVSTDNPVSSEQLLSQLNDQLAAPFAKLTAQVKTYDSNTALKALINEDVKVVVGWSS 269
Query: 214 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL 273
DV A+KR ++ VVP G+ L AD+W P + L + WI FC
Sbjct: 270 DVAVALKRYRDLRAVVPDEGSLLSADMWVQPKGATLTSA------------AKTWISFCW 317
Query: 274 QTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLE 333
Q A G SP L T +LP L + + S L E L
Sbjct: 318 QQGPATELS-TTPKGISPIFLATD-KQLPSSLERTQLS-----------LRALQNSELLS 364
Query: 334 PLSEA 338
PLS++
Sbjct: 365 PLSQS 369
>gi|119512455|ref|ZP_01631537.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
gi|119462921|gb|EAW43876.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
Length = 244
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 92/143 (64%), Gaps = 7/143 (4%)
Query: 27 VPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDW--FKCLSHKWKVYL 84
+PF K S P +A+DLV++GD WL AI+++LI+P+ AE + + L W+ +
Sbjct: 104 IPFRK----SPPAVASDLVTLGDYWLKAAIEQKLIQPLEEAEIKQLKHWSALDKTWQQLV 159
Query: 85 RRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVN 144
R++ G +D +G +WAAPYRWG+ VI Y + K + P +DW DLWR L RIS+V+
Sbjct: 160 TRDNQGNLDTQGNVWAAPYRWGSTVIVYNRQKLQSLGWTP-QDWSDLWRDGLQERISIVD 218
Query: 145 SPREVIGSVLKYMGASYNSNNID 167
REVIG VLK +G SYN+ N+D
Sbjct: 219 QSREVIGLVLKKLGESYNTENLD 241
>gi|22298258|ref|NP_681505.1| hypothetical protein tll0716 [Thermosynechococcus elongatus BP-1]
gi|22294437|dbj|BAC08267.1| tll0716 [Thermosynechococcus elongatus BP-1]
Length = 352
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 129/277 (46%), Gaps = 37/277 (13%)
Query: 40 MAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIW 99
+ + ++S+GD+WL+ A+ + I PI Q+ F + W+ L+ G+ +W
Sbjct: 78 LGSAVLSLGDAWLNQAMSQHQIAPIPKTRIQNRFDW-AEPWQPLLQAISQGD-----TLW 131
Query: 100 AAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 159
PYRWG + Y++ F P DW LW P + G S++N+PREVIG LK +G
Sbjct: 132 GLPYRWGATALIYRRDFFADLGWEPT-DWDVLWHPAVQGHYSLLNTPREVIGLTLKSLGL 190
Query: 160 SYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 219
SYNS +++ L L R S YL+ +G +AVGWS+D+LP +
Sbjct: 191 SYNS-------PAPHPELRERLQHLRQGCRFLSSDAYLQPLMLGSTQLAVGWSTDLLPLL 243
Query: 220 KR-MSNVAVVVPKSGASLWADLWAIPAASRLET---------KQIGGRVR----GPSPLI 265
++ V P SG +LW DLW P Q+ R+ PSPL+
Sbjct: 244 QQDPQTYGAVFPASGTALWVDLWVCPREPNAAALAWLNYWWQPQVAERLSQFSPAPSPLV 303
Query: 266 HQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 302
E L +R +PF A+P+A + V LP
Sbjct: 304 RNLRETLL--SRYIPF-------ATPTAFAKSEVLLP 331
>gi|303290100|ref|XP_003064337.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226453935|gb|EEH51242.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 647
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 133/295 (45%), Gaps = 61/295 (20%)
Query: 27 VPFNKVK----AKSAPYMA-ADLVSVGDSWLSFAIKKRLIEP----IAGAEDQDWFKCLS 77
PFN ++ P +A AD+VS+GD +L+ AI+ LI P +A AE W+ L
Sbjct: 230 TPFNSTPISSLVRNGPKIAKADVVSLGDEFLAPAIQNGLILPLPDDVANAE---WYARLP 286
Query: 78 HKWKVYLRRNDAGEIDPR-----------------------------------GKIWAAP 102
W+ R+ +G P GK++ P
Sbjct: 287 AVWRALACRDASGYPAPPPPPGSYKRGANANSNGSSAAVSASASTAEANNGRYGKLYGVP 346
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
YRWG +IAY+K K L P DW DL+RP+ ++ + + R ++ L+ G S N
Sbjct: 347 YRWGCYLIAYRKDKI-PRGLRPPTDWPDLFRPQYKKKVGIASGSRFMLTVALRAGGRSAN 405
Query: 163 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 222
+ ++D ++ LA Q L L+ GDVW+ G S DVL +
Sbjct: 406 ATDVDDATRNRLYDLRTTQ--LATQVDL----DALQGLSNGDVWIIAGNSDDVLKTAAKS 459
Query: 223 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 277
SN+ VVVP SG +L+AD W +PAA+ + G SPL+ QW +F Q AR
Sbjct: 460 SNIGVVVPSSGTTLYADAWCVPAAALDKPG-------GVSPLVDQWFDFTTQPAR 507
>gi|424513096|emb|CCO66680.1| periplasmic polyamine-binding protein of ABC transporter
[Bathycoccus prasinos]
Length = 572
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 23/309 (7%)
Query: 48 GDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWK-VYLRRNDAGEI----DPRGKIWAAP 102
GD++L AI+++LI P + WF+ L +K + R G+I DP G+++A P
Sbjct: 269 GDAYLKAAIREKLILPFEITGKERWFRALPDVYKNLCFRDYRTGDIVRSTDPNGRLFAVP 328
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGR--ISMVNSPREVIGSVLKYMGAS 160
YR ++AY+ K + + I DW D++ P + + ++PREV+ + LK MG
Sbjct: 329 YRVTATLLAYRADKLPR-GVEAITDWTDVFDPRFGNKTFVGCADAPREVLSAALK-MGDP 386
Query: 161 YNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 220
N+ I+ + + S + L L + ++ D YL+A GD+ VA G S DVL +
Sbjct: 387 RNT--INPKTIDNERSQRDALRRLRAKIKVSDDETYLRALQNGDISVAFGGSDDVLALCR 444
Query: 221 RMSNVAVVVPKSGASLWADLWAIPAASRLE--TKQIGGRVRGPSPLIHQWIEFCLQTARA 278
R S V V P SG +L D++ P + T + SP I W++F L + R
Sbjct: 445 RSSLVKPVFPPSGTALHCDVFVRPVLNEGGGYTSSVPHSAPSSSPGIDAWLDFMLDSGR- 503
Query: 279 LPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDT--NLIVGVPPAEIL-ARCEFLEPL 335
+ + + G +P + + + G+ SQD ++ G P ++ + EF+ PL
Sbjct: 504 INERGGLRSGLNPIQFDG------DRIYGGRSSQDDVGDIFKGWLPDDMAWSNSEFVLPL 557
Query: 336 SEATLSDYE 344
S+A + YE
Sbjct: 558 SDAAIRAYE 566
>gi|354566674|ref|ZP_08985845.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353544333|gb|EHC13787.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 361
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 114/247 (46%), Gaps = 35/247 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVI 150
DP + ++ P+ WGT + Y + P EDW+ LW+ +L +I+++N REV+
Sbjct: 133 DPNNR-YSLPFNWGTTGLIYNSEILKN----PPEDWEYLWQNQQQLNNKITLLNDVREVM 187
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+VLK +G SYNS N + +V + L L FD+ + GD+ +++
Sbjct: 188 GAVLKMLGYSYNSKN-ETEVK----QAYEKLQALKGAIAAFDTDAWRNQIVAGDLLLSMC 242
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+SSD + + VVPKSG+SLW D IP +R I G + WI
Sbjct: 243 YSSDAVKITQENPKFKYVVPKSGSSLWTDTVVIPTTAR----NIDG--------AYAWIN 290
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F F+ EV S TT + ELL K D N+ PP IL +CE
Sbjct: 291 FI--------FQPEVAAQISQRLWVTTSSRAAFELLPNKIKNDPNVF---PPDSILEKCE 339
Query: 331 FLEPLSE 337
+ PL E
Sbjct: 340 RITPLGE 346
>gi|254412638|ref|ZP_05026411.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
gi|196180373|gb|EDX75364.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
Length = 371
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 122/258 (47%), Gaps = 43/258 (16%)
Query: 86 RNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMV 143
R + DP G + P WGT + Y + + P EDW LW + +LA R+++V
Sbjct: 136 RFQQADYDP-GNRHSVPVSWGTTGLVYNTQQVQP----PPEDWDYLWVYQQQLAKRMTLV 190
Query: 144 NSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
N REV+G+ LK +G SYNS N++ +Q A Q L L F S +
Sbjct: 191 NDVREVMGAALKKLGYSYNSTNVEHIQAA------YQALMDLKPAIASFTSDAWRPQILS 244
Query: 203 GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS 262
GD+ +A+ +SSD + ++ V+P+SG+SLW D AIP + V G
Sbjct: 245 GDLKIAMCYSSDATEIMPENEDLRYVLPESGSSLWIDTLAIP--------KTAPNVEG-- 294
Query: 263 PLIHQWIEFCLQ---TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVG 319
+ WI F LQ AR + E + A+P+ L LP +L DT+L
Sbjct: 295 --AYAWINFMLQPDVAARIV----ERLSFATPNKAAYNL--LPPDL-----KNDTSLF-- 339
Query: 320 VPPAEILARCEFLEPLSE 337
PP E L RCE LEPL E
Sbjct: 340 -PPEEALERCENLEPLGE 356
>gi|300869344|ref|ZP_07113934.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
gi|300332643|emb|CBN59132.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
Length = 376
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 37/250 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 150
DP G ++ P WGT + Y K + PIEDW DLW+ + L+ R++++N REV+
Sbjct: 148 DP-GNRYSVPLAWGTTGLIYNTEKIKY----PIEDWDDLWKNQKALSKRMTLLNDLREVM 202
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ L+ +G S N+ N + L+ L F + + +GD+ VA+
Sbjct: 203 GAALRMLGYSLNTTN-----PNEIREAYERLSELKPDLASFTTDAWRPQMLVGDLMVAMC 257
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWI 269
+SSD + +N+ +VP+SG+SLW D IP + P+P ++WI
Sbjct: 258 YSSDANEVIPENTNLQYIVPRSGSSLWTDTLVIPKFA-------------PNPEAAYKWI 304
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
F LQ A + ++PS L+ +P N I+ PP EILA+C
Sbjct: 305 NFMLQGDVAASLVDR-LSFSTPSEEAFNLL---------EPEVRENKIL-FPPEEILAKC 353
Query: 330 EFLEPLSEAT 339
+ + P+ E T
Sbjct: 354 QGIAPVGEVT 363
>gi|224139138|ref|XP_002326777.1| predicted protein [Populus trichocarpa]
gi|222834099|gb|EEE72576.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 71/112 (63%), Gaps = 8/112 (7%)
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWA-IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 274
P KRMSNVAVV P +G SLWADL + +P L+ + G ++ LIH+WIE LQ
Sbjct: 3 FPLPKRMSNVAVVSPNTGTSLWADLQSQLP--RDLKLIRSGAKLEDHPSLIHEWIEIRLQ 60
Query: 275 TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
ARALPFKQEVIPGA+PS + +P+EL K KP TNLI V P +I
Sbjct: 61 AARALPFKQEVIPGATPSD-----IGVPKELAKCKPKLGTNLIAEVHPPDIF 107
>gi|17232535|ref|NP_489083.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
gi|17134181|dbj|BAB76742.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
Length = 360
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 124/246 (50%), Gaps = 37/246 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 150
DP+ + ++ P+ WGT + Y ++ AP EDW+ LWR + L+ R++++N REVI
Sbjct: 132 DPKNR-YSIPFNWGTTGLIYNSEILKE---AP-EDWEYLWRNQKLLSKRMTLLNDVREVI 186
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+VL+ +G SYNS N + Q+ + L+ L FD+ + GD+ +A+
Sbjct: 187 GAVLRMLGYSYNSQN-EAQIK----QAYEKLSTLKPAIAAFDTDAWRNQILAGDLALAMC 241
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+S+D +K + V+P+SG+SLW D IP ++ + G + WI
Sbjct: 242 YSADATKVIKENPKLKYVIPRSGSSLWTDTIVIPKSA----PNLDG--------AYAWIN 289
Query: 271 FCLQTARALPFKQEV-IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
F LQ A + + I + +A E +LP+++ + NL PP+ IL +C
Sbjct: 290 FILQPEVAATTSERLKISTPNNAAFE----QLPKQI-----KTNENL---YPPSSILDKC 337
Query: 330 EFLEPL 335
E + P+
Sbjct: 338 ERISPV 343
>gi|75908519|ref|YP_322815.1| extracellular solute-binding protein [Anabaena variabilis ATCC
29413]
gi|75702244|gb|ABA21920.1| extracellular solute-binding protein, family 1 [Anabaena variabilis
ATCC 29413]
Length = 360
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 124/246 (50%), Gaps = 37/246 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 150
DP+ + ++ P+ WGT + Y ++ AP EDW+ LW+ + L+ RI+++N REVI
Sbjct: 132 DPKNR-YSIPFNWGTTGLIYNSEILKE---AP-EDWEYLWKNQKLLSKRITLLNDVREVI 186
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+VL+ +G SYNS N + Q+ + L+ L FD+ + GD+ +A+
Sbjct: 187 GAVLRMLGYSYNSQN-EAQIK----QAYEKLSTLKPAIAAFDTDAWRNQILAGDLALAMC 241
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+S+D +K + V+P+SG+SLW D IP ++ + G + WI
Sbjct: 242 YSADATKVIKENPKLKYVIPRSGSSLWTDTIVIPKSA----PNLDG--------AYAWIN 289
Query: 271 FCLQTARALPFKQEV-IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
F LQ A + + I + +A E +LP+++ + NL PP+ IL +C
Sbjct: 290 FILQPEVAATTSERLKISTPNNAAFE----QLPKQI-----KTNENL---YPPSSILDKC 337
Query: 330 EFLEPL 335
E + P+
Sbjct: 338 ERISPV 343
>gi|427736973|ref|YP_007056517.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427372014|gb|AFY55970.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 361
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 112/242 (46%), Gaps = 36/242 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 156
++ P WGT Y K P +DW LW+ + L+ RI+++N REVIG VLK
Sbjct: 138 YSVPMSWGTTGFIYNSEKLE----TPPQDWDYLWQNQKKLSKRITLLNDAREVIGGVLKM 193
Query: 157 MGASYNSNNIDLQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G SYNS +G +I + L +L F + + GD+ +A+ +SSD
Sbjct: 194 LGYSYNSQ------SGKQIQQAYEKLQVLKPDIAAFSTDAWRNQILSGDLVLAMCYSSDA 247
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ + + PKSG+SLW D AIP + T I G ++WI F L+
Sbjct: 248 FLITRDNPKLKYITPKSGSSLWTDTIAIP----ITTSNIDG--------AYEWINFMLKP 295
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A Q + A+P+ L LPE+ ++ P+ PP IL +CE L P+
Sbjct: 296 EVAARMSQR-LGVATPNQAGFEL--LPEK-IQNNPTL-------FPPENILEKCERLSPV 344
Query: 336 SE 337
E
Sbjct: 345 GE 346
>gi|414075947|ref|YP_006995265.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
gi|413969363|gb|AFW93452.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
Length = 360
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 37/248 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVI 150
DP + ++ P+ WGT + Y K AP EDW+ LW+ +L R +++N REV+
Sbjct: 133 DPNNR-YSIPFNWGTTGLLYNSEKLTN---AP-EDWEYLWQNQDQLNKRFTLLNDVREVM 187
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ L+ +G SYNS N + +V Q L +L FD+ + GD+ VA+
Sbjct: 188 GATLRMLGYSYNSQNEN-EVK----QAYQKLQILKPAIAAFDTDAWQNKILAGDLAVAMC 242
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+S+D + + + V+P+SG+SLW D IP ++ I G + WI
Sbjct: 243 YSADAVKICQENPKLKFVIPRSGSSLWTDTIVIPKSN----PNIAG--------AYAWIN 290
Query: 271 FCLQTARALPFKQEV-IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
LQ A + + I S + E +LP+ + ++TNL PP +LA+C
Sbjct: 291 LILQPEVAAKISERLYISTPSRAGFE----QLPKAI-----QENTNLF---PPQSLLAKC 338
Query: 330 EFLEPLSE 337
E L PL +
Sbjct: 339 ERLTPLGK 346
>gi|374853292|dbj|BAL56204.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
gi|374857069|dbj|BAL59922.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 118/254 (46%), Gaps = 45/254 (17%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPRE 148
DP+ + ++ PY WGT I Y K P W DL+ P+ R+SM++ PRE
Sbjct: 122 DPQNR-YSIPYLWGTTGIGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPRE 176
Query: 149 VIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
IG+ LKY+G S NS + L+ A + VQ+ LA +DS Y GD+ +
Sbjct: 177 AIGAALKYLGYSVNSTDPQQLEAAKNLLLVQK--PYLAR----YDSETYDDFLLTGDLVL 230
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
A GWS + A SN+ V+P+ G +WAD AIP +S+ R+ L H
Sbjct: 231 AHGWSGEFAKAHVENSNIRYVIPREGGVIWADNLAIPKSSQ--------RID----LAHT 278
Query: 268 WIEFCLQ---TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE 324
+I+F L+ A+ + F + PS E + E++ N PP E
Sbjct: 279 FIDFLLRPTINAKIVNFLR------YPSTNEAATAHILPEIV--------NDPAIYPPEE 324
Query: 325 ILARCEFLEPLSEA 338
IL + E++ + +A
Sbjct: 325 ILEKLEWIRDVGDA 338
>gi|440682704|ref|YP_007157499.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428679823|gb|AFZ58589.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 363
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 35/247 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 150
DP + ++ P+ WGT + Y K P EDW+ LW+ + L R++++N REV+
Sbjct: 136 DPNNR-YSIPFNWGTTGLLYNSEKLEN----PPEDWEYLWQNQDKLYKRMTLLNDVREVM 190
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ LK +G SYNS N + +V + L +L FD+ + GD+ +A+
Sbjct: 191 GAALKMLGYSYNSQN-ETEVK----QAYEKLKILKPAIAAFDTDAWQNQLLAGDLLLAMC 245
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+S+D + K V+P+SG+SLW D IP +I + G + WI
Sbjct: 246 YSTDAVNISKENPKFKYVIPRSGSSLWTDTIVIP--------KIAANLAGA----YAWIN 293
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
LQ +V S +T + E L + ++TNL PP +LA+CE
Sbjct: 294 LILQP--------DVTAKLSKRLNISTPNRAGFEQLPKQSRENTNLF---PPESLLAKCE 342
Query: 331 FLEPLSE 337
P+ E
Sbjct: 343 RSTPIGE 349
>gi|428206397|ref|YP_007090750.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428008318|gb|AFY86881.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 373
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 39/249 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 150
DP+ + + P WGT Y + ++ P DW+ LW R +L+GR+++++ REV+
Sbjct: 145 DPQNR-HSIPMSWGTTGFVYNTQQLKE----PPTDWEYLWKNRQQLSGRMTLIDDVREVM 199
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ L+ +G SYNS + + Q+ + L L FD+ + GD+ +A+
Sbjct: 200 GATLRMLGYSYNSKD-ESQIK----QAYEKLRELKPSIAAFDTDAWRSQILAGDLVLAMA 254
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASRLETKQIGGRVRGPSPLIHQWI 269
+S+D + + N+ ++P SG SLW D AIP A L+ + W+
Sbjct: 255 YSTDGIKISQENPNLRYIIPASGTSLWTDTIAIPKTAPNLDAA-------------YTWL 301
Query: 270 EFCLQ-TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
+ L+ T A +++ + + ALE +LP +L QDTNL PP +L +
Sbjct: 302 NYNLEPTVAAEICQRQTVAIPNQVALE----QLPTQL-----RQDTNLF---PPESVLNK 349
Query: 329 CEFLEPLSE 337
CE + PL +
Sbjct: 350 CERISPLGD 358
>gi|284047717|ref|YP_003398056.1| extracellular solute-binding protein [Acidaminococcus fermentans
DSM 20731]
gi|283951938|gb|ADB46741.1| extracellular solute-binding protein family 1 [Acidaminococcus
fermentans DSM 20731]
Length = 353
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 108/243 (44%), Gaps = 22/243 (9%)
Query: 6 KRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIA 65
K + + N + D NN + K++A A Y DL+ D +S IK ++E +
Sbjct: 51 KAFEKKYNCRVNYDVFANNEEL-LAKIQAGGAQY---DLIQPSDYMVSTMIKLGMLEKL- 105
Query: 66 GAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPI 125
D+D H + DPRG+ ++ Y WG I Y K K+ P
Sbjct: 106 ---DKDALPNTRHMMDTLQHP----QFDPRGE-YSVVYTWGMTGIIYNK----KYVKTPP 153
Query: 126 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLA 185
W DLW P GR+ ++N REV G LK G S NS + D Q+A Q+L LA
Sbjct: 154 TSWNDLWDPAYKGRVILLNDSREVFGMALKKNGWSNNSTDPD-QLA----KAFQDLKELA 208
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 245
+D+ + F + W+ WS D + + N+ V+PK G +WAD AIP
Sbjct: 209 PSVLAYDTDSLKQKFIAEEGWIGTMWSGDASFSYRENPNLGFVIPKEGTLVWADTLAIPK 268
Query: 246 ASR 248
++
Sbjct: 269 GAK 271
>gi|315641327|ref|ZP_07896403.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
gi|315482900|gb|EFU73420.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
Length = 357
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 46/299 (15%)
Query: 56 IKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKS 115
IK L+ P+ D K LS+ +L + DP G ++ PY WGT+ I Y
Sbjct: 98 IKANLLIPL----DHSKIKGLSNIGDSFLNL----DFDP-GNQYSIPYFWGTLGIVYN-D 147
Query: 116 KFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGK 174
KF N + W DLWRPEL I +++ RE+IG L +G S NS N+D L A K
Sbjct: 148 KFV--NAEDMTSWNDLWRPELKDNIMLIDGAREIIGLGLNSLGYSVNSKNMDQLNQAVAK 205
Query: 175 I-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKS 232
+ ++ N+ A++A++ +++ + VAV +S + + S++ V+PK
Sbjct: 206 LRTLTPNVKAIVADEIKMYMENE--------ESAVAVTFSGEAADMMYENSHLHYVIPKE 257
Query: 233 GASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPS 292
G +LW+D IP S+ Q G + +I F L+ A E I ++P+
Sbjct: 258 GTNLWSDNIVIPKTSK---NQEGA---------YAFINFMLEPKNAAQ-NAEYIGYSTPN 304
Query: 293 ALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 351
E + +P+E+++ K P E++A+ E L L Y L +L+
Sbjct: 305 --EAAMKLMPKEVVEDKQF--------YPTKEMMAKMEVYRDLGSKYLGIYNDLFLELK 353
>gi|357385895|ref|YP_004900619.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
gi|351594532|gb|AEQ52869.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
Length = 363
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 21/167 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKF--RKHNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G ++ PY WGT I Y R P++ W L+ PE+A + IS++++
Sbjct: 118 DP-GAQYSVPYMWGTTGIGYNVGAITERLGEDGPLQSWDLLFDPEIAAQLADCGISVLDA 176
Query: 146 PREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
P E++ + L Y+G NS DL+ A +Q +A + R+F+S+ Y+ G+
Sbjct: 177 PVEMVAAALNYLGLDPNSETPEDLEAA------EQLIASIRPHIRMFNSSQYISDLANGE 230
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
+ +AVG+S DV A R + +A V+P+ GASLW D+ AIPA
Sbjct: 231 ICLAVGYSGDVFIAADRAAEAGQGVEIAYVIPEEGASLWFDMMAIPA 277
>gi|428217887|ref|YP_007102352.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989669|gb|AFY69924.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 392
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 35/266 (13%)
Query: 84 LRRNDAGEIDPR---GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRI 140
L D +DP G ++ P GT +AY + + + EDW+ +W R+
Sbjct: 146 LENLDQAFLDPSYDPGSAYSLPVSLGTTGLAYNSAAIIEEIGSEPEDWQFMWEHIDRLRL 205
Query: 141 SMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKA 199
+++N PREV+G L + SYNS+N D LQ A ++ Q+L ++ FD+ + +
Sbjct: 206 TLLNDPREVMGMALHTLNYSYNSDNGDELQAAFERL---QDLKPAVSK---FDTYAWAEP 259
Query: 200 FGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVR 259
GD +++ +S D L AV++ ++ ++P SG S+W D IP +
Sbjct: 260 LMAGDYLISMAYSGDGLNAVRQNPDIKYILPASGTSIWTDAVVIPKTA------------ 307
Query: 260 GPSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIV 318
P P + WI+F +Q A +E G +A + L K+ EEL ++
Sbjct: 308 -PDPEAAYAWIDFIMQPEIAARMSEESSYG---TANKAALPKIKEEL--------KDIPA 355
Query: 319 GVPPAEILARCEFLEPLSEATLSDYE 344
+P AEILA+ + L L + L YE
Sbjct: 356 WLPSAEILAKSDRLVKLPDEVLQVYE 381
>gi|298492376|ref|YP_003722553.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298234294|gb|ADI65430.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 363
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 39/249 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 150
DP ++ P+ WGT + Y K P EDW+ LWR + L R++++N REV+
Sbjct: 136 DPNNH-YSIPFNWGTTGLLYNSEKLT----TPPEDWEYLWRNQDKLYKRMTLLNDVREVM 190
Query: 151 GSVLKYMGASYNSNN-IDLQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
G+ LK +G SYNS N ++++ A K+ S++ LA FD+ + GD+ +A
Sbjct: 191 GATLKMLGYSYNSQNEMEIKQAYEKLLSLKPALAA-------FDTDAWQNQILAGDLLLA 243
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
+ +S+D + K + + V+P+SG+SLW D IP + P + W
Sbjct: 244 MCYSADGIKISKENAKLKYVIPRSGSSLWTDTIVIP------------KTANNLPGAYSW 291
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I L+ A + + A+P+ +LP ++ +TNL PP IL +
Sbjct: 292 INLLLKPDVAAAISKR-LNIATPN--RAGFEQLPNQI-----QNNTNLF---PPQGILDK 340
Query: 329 CEFLEPLSE 337
CE + P+ +
Sbjct: 341 CERVTPIGK 349
>gi|427730105|ref|YP_007076342.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427366024|gb|AFY48745.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 360
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 35/247 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 150
DP+ + ++ P+ WGT + Y ++ AP EDW LW+ + L R++++N REV+
Sbjct: 132 DPKNR-YSIPFNWGTTGLLYNSEILKQ---AP-EDWNYLWQNQALLNKRMTLLNDVREVM 186
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+VL+ +G SYNS N + L L FD+ + GD+ +A+
Sbjct: 187 GAVLRMLGYSYNSQN-----ENEIKQAYEKLTELKPAIAAFDTDAWQNQMLAGDLVLAMC 241
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+S+D + K + V+P+SG+SLW D IP ++ I G + WI
Sbjct: 242 YSADAIRVSKENPKLKYVIPRSGSSLWTDTMVIPKSA----PNIDG--------AYAWIN 289
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F LQ A Q + A+P++ L+ P+Q N PP +L +CE
Sbjct: 290 FILQPEIAATTSQR-LKIATPNSAGFELL----------PNQIKNNDDLFPPNALLEKCE 338
Query: 331 FLEPLSE 337
+ PL +
Sbjct: 339 RISPLGQ 345
>gi|428226280|ref|YP_007110377.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427986181|gb|AFY67325.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 376
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 41/253 (16%)
Query: 93 DPR---GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPR 147
DPR G + P WGT + Y + RK P EDW+ LW +P L+ RI+++N R
Sbjct: 144 DPRYDPGNRHSVPMSWGTTGLVYNR---RKLQTVP-EDWRYLWDNQPMLSRRITLLNDMR 199
Query: 148 EVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
EV+G+ L+ +G SYN+ + L+ A + L L F S + GD+
Sbjct: 200 EVMGATLRMLGYSYNAEDPAQLEAA------YEELVKLKPAIASFTSDAWRSQIITGDLL 253
Query: 207 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASRLETKQIGGRVRGPSPLI 265
+A+ +SSD + ++ ++P+SG+SLW D IP +A +E
Sbjct: 254 IAMSYSSDAQLVTEENPDLEYLIPQSGSSLWVDTMVIPKSAPNVEAA------------- 300
Query: 266 HQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEI 325
+ W+ F +Q + + Q + G +P + + +LL + D L PP ++
Sbjct: 301 YAWLNFMMQPSVLVDLCQRL--GFTPPS------RAAADLLPTELRNDPGLF---PPDQV 349
Query: 326 LARCEFLEPLSEA 338
LARCE + P+S A
Sbjct: 350 LARCEGIAPVSGA 362
>gi|434404601|ref|YP_007147486.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428258856|gb|AFZ24806.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 361
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 37/248 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 150
DP K + P+ WGT + Y K AP EDW LW + +L R++++N REVI
Sbjct: 133 DPNNK-YCIPFNWGTTGLIYNSEKLET---AP-EDWDYLWQNKEKLNKRMTLLNDVREVI 187
Query: 151 GSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G+ L+ +G SYNS N +++ A K+ V L FD+ + GD+ +A+
Sbjct: 188 GATLRMLGYSYNSQNETEIKQAYEKLKV------LKPAVSAFDTDAWQNQLLAGDLLLAM 241
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
+S D + + + V+P+SG++LW D IP + + G + WI
Sbjct: 242 CYSGDAVKMSRENPKLKFVIPRSGSTLWTDNLVIPK----DAPNLAG--------AYAWI 289
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
+ LQ + F E + A+P++ L LP+ L +D NL PP L +C
Sbjct: 290 NWILQPEVSAQFT-ERLNIATPNSAAFDL--LPKRL-----QEDENLF---PPESSLEKC 338
Query: 330 EFLEPLSE 337
E + PL +
Sbjct: 339 ERVTPLGK 346
>gi|113476392|ref|YP_722453.1| extracellular solute-binding protein [Trichodesmium erythraeum
IMS101]
gi|110167440|gb|ABG51980.1| extracellular solute-binding protein, family 1 [Trichodesmium
erythraeum IMS101]
Length = 353
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 110/247 (44%), Gaps = 39/247 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 150
DP G + P WGT + Y P DWK LW + + R+++VN REVI
Sbjct: 125 DP-GNTHSVPISWGTTGLIYNSKLLS----TPPNDWKYLWENQDLVLKRMTLVNDVREVI 179
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G L+ +G SYNS N+D K + Q+ L L A F + + + D+ +A+
Sbjct: 180 GCALRKLGYSYNSTNVD----NIKEAYQELLTLKPAIAS-FTTDGWRSQILVEDLLIAMC 234
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IHQWI 269
+SSD ++ + P+SG+SLW D IP P+P +QWI
Sbjct: 235 YSSDAAEIKPENEDLEYITPRSGSSLWTDTLVIPK-------------NAPNPEGAYQWI 281
Query: 270 EFCLQTARALPFKQEV-IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
F LQ A + + AS A + LPEEL +D+ L PP +L +
Sbjct: 282 NFMLQPDVAAQIVERLSFTTASRKAYQI----LPEEL-----KEDSTLF---PPESVLEK 329
Query: 329 CEFLEPL 335
CE L PL
Sbjct: 330 CESLAPL 336
>gi|427716541|ref|YP_007064535.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427348977|gb|AFY31701.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 361
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 120/247 (48%), Gaps = 35/247 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVI 150
DP + ++ P+ WGT + Y + AP EDW LW+ +L R++++N REV+
Sbjct: 133 DPNNR-YSIPFNWGTTGLLYNSEIIKN---AP-EDWDYLWQNQTQLHKRMTLLNDVREVM 187
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ L+ +G SYNS + + Q+ + L +L FD+ + GD+ +A+
Sbjct: 188 GATLRMLGYSYNSKDEN-QIK----QAYEKLKVLKPAIAAFDTDAWQNQILAGDLVLAMC 242
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+S+D + K ++ V+P+SG+SLW D IP + + G + WI
Sbjct: 243 YSADAIRVSKENPHLKYVIPRSGSSLWTDTIIIPKTA----PNLDG--------AYAWIN 290
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F LQ A Q + A+P+ + +LP+++ +TNL PP I+ +CE
Sbjct: 291 FILQPEVAAQVSQR-LSVATPN--RSGFEQLPKQI-----QNNTNLF---PPESIVEKCE 339
Query: 331 FLEPLSE 337
+ PL +
Sbjct: 340 RITPLGK 346
>gi|152974814|ref|YP_001374331.1| extracellular solute-binding protein [Bacillus cytotoxicus NVH
391-98]
gi|152023566|gb|ABS21336.1| extracellular solute-binding protein family 1 [Bacillus cytotoxicus
NVH 391-98]
Length = 350
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + GR++++N REV+G
Sbjct: 121 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGRVTLLNDSREVLG 175
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 176 MALKKNGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDTWIGTV 229
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 230 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 267
>gi|374855306|dbj|BAL58166.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 116/254 (45%), Gaps = 45/254 (17%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPRE 148
DP+ + ++ PY WGT I Y K P W DL+ P+ R+SM++ PRE
Sbjct: 122 DPQNR-YSIPYLWGTTGIGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPRE 176
Query: 149 VIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
IG+ LKY+G S NS + L+ A + VQ+ LA +DS Y GD+ V
Sbjct: 177 AIGAALKYLGYSVNSTDPQQLEAAKNLLLVQK--PYLAR----YDSETYDDFLLTGDLVV 230
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
A GWS + A N+ V+P+ G +WAD AI +S+ R+ L H
Sbjct: 231 AHGWSGEFAKAHVENPNIRYVIPREGGVIWADNLAILKSSQ--------RID----LAHT 278
Query: 268 WIEFCLQ---TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE 324
+I+F L+ A+ + F + PS E + E++ N PP E
Sbjct: 279 FIDFLLRPTINAKIVNFLR------YPSTNEAATAHILPEIV--------NDPAIYPPEE 324
Query: 325 ILARCEFLEPLSEA 338
IL + E++ + +A
Sbjct: 325 ILEKLEWIRDVGDA 338
>gi|414585609|tpg|DAA36180.1| TPA: hypothetical protein ZEAMMB73_943866 [Zea mays]
Length = 232
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 57/79 (72%)
Query: 4 QGKRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEP 63
QGK+LKF L A++DGI + +S +K + + MAAD+VS+GDSWL +AI K L+EP
Sbjct: 147 QGKKLKFSAELRANLDGIFSEMSRCMDKGQVQPKSAMAADVVSLGDSWLGYAICKELLEP 206
Query: 64 IAGAEDQDWFKCLSHKWKV 82
+ AE+QDWF+ LS +WKV
Sbjct: 207 VKNAEEQDWFRRLSDRWKV 225
>gi|333900395|ref|YP_004474268.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333115660|gb|AEF22174.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 361
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 25/219 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +LS I+ ++ +P+ ++ +W SH ++R +A DP G +A P
Sbjct: 72 DLVVPSSQFLSKQIRAQVYQPLERSKLPNW----SHLDPRLMQRLEAA--DP-GNKYAVP 124
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRP----ELAG-RISMVNSPREVIGSVLK 155
Y WGT+ + Y K R AP++ W+ ++ +L G ++ +++P ++I L
Sbjct: 125 YMWGTVGVGYNAEKVRAALGEGAPVDSWELVFNAGNLAKLKGCGVAFLDAPVKIIPQALH 184
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS++ D + L LA F S+ Y+ GD+ VAVG+S DV
Sbjct: 185 YLGMDPNSHDPDDYTKASAL-----LQKLAPSVTYFHSSRYISDLANGDICVAVGYSGDV 239
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ A R ++ V+PK GA+LW D+ AIP +R
Sbjct: 240 MQAQSRAKDAGKSVDIRYVIPKEGANLWFDMLAIPCDAR 278
>gi|108805698|ref|YP_645635.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM
9941]
gi|108766941|gb|ABG05823.1| extracellular solute-binding protein, family 1 [Rubrobacter
xylanophilus DSM 9941]
Length = 363
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 49/323 (15%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
K++A Y D++ D + K +I+P+ + + FK + ++
Sbjct: 86 KLQAGGTGY---DVIVPSDYMVEIMAKSEVIQPLDRGKIPN-FKNVGENFR-------GL 134
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
DP + ++ PY+WGT I Y + + + ++ W +W PE G+I+M+N RE I
Sbjct: 135 PYDPENR-YSVPYQWGTTGILYNRKE-----IGEVDSWDAMWNPEFKGKIAMLNDVRETI 188
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ L +G S NS + D ++A + S+++ LL F ST A GD+ +
Sbjct: 189 GAALMRLGYSINSTDPD-ELAEAEESLKEQKPLLRG---YFASTEVRPAVQNGDLLLGHV 244
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS-PLIHQWI 269
+S D A+ ++ +PK GA+ W D AIP V P L H++I
Sbjct: 245 YSGDAFLAMVENEELSYAIPKPGATRWTDNMAIP-------------VGAPHVDLAHEFI 291
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPA-EILAR 328
+ L+ P T P E ++ + G P+ E+ R
Sbjct: 292 NYILE------------PKVGAELSNYTYYNTPNEAALPMIDEELRRLPGYTPSQEVFGR 339
Query: 329 CEFLEPLSEATLSDYEWLVADLQ 351
+ +E + EAT YE + +++
Sbjct: 340 LQVIEDVGEAT-RRYERIFTEVK 361
>gi|428302168|ref|YP_007140474.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428238712|gb|AFZ04502.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 365
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 40/256 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 150
DP + ++ P+ WGT Y K P EDW+ +W R L R++++N REV+
Sbjct: 137 DPNNR-YSIPFTWGTTGFIYNSEKLT----TPPEDWEYIWQNRDILNKRMTLMNDSREVM 191
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ LK +G SYN+ + + Q+ + L + + FD+ + GD+ +A+
Sbjct: 192 GAALKMLGYSYNATD-ETQIKAA----YEKLKEIKDSISSFDTDAWRSKIVTGDLDLAMS 246
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IHQWI 269
+SSD + K + V+PKSG SLW D I + P+P + WI
Sbjct: 247 YSSDAIKLTKENPKLKYVIPKSGTSLWTDTLVIMKTA-------------PNPDGAYAWI 293
Query: 270 EFCLQTARALPFKQ-EVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
+ LQ + Q + + + +A E +LP + +TNL P +L +
Sbjct: 294 NYLLQPEVSAKLTQNQSLATPNRAAFE----QLPAAI-----QNNTNLF---PSQSLLEK 341
Query: 329 CEFLEPLSEATLSDYE 344
C+ + PL + TL YE
Sbjct: 342 CDRMSPLGD-TLEIYE 356
>gi|332705363|ref|ZP_08425441.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355723|gb|EGJ35185.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 374
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 40/258 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 150
DP + + P WGT + Y K K P EDW LW + +L+ R++++N REV+
Sbjct: 146 DP-NNLHSIPLSWGTTGLIYNSKKLSK---VP-EDWSYLWQDKDKLSRRMTLLNDVREVM 200
Query: 151 GSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G+ LK +G SYNS N +++ A + L L F S + GD+W+A+
Sbjct: 201 GATLKMLGYSYNSTNPQEIKKA------YETLVDLKPSIASFSSDAWRSQILSGDLWIAM 254
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASRLETKQIGGRVRGPSPLIHQW 268
+SSD + ++ V+PKSG+SLW D AIP A LE + W
Sbjct: 255 CYSSDAAEIMAENPDLQYVLPKSGSSLWTDTLAIPKTAPNLEGA-------------YAW 301
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I F L+ A E + A+P+ + +LL + +D +L P + L R
Sbjct: 302 INFMLEADVAAQI-CERLSFATPN-------QKAFKLLSREIQEDQSLF---PESSALER 350
Query: 329 CEFLEPLSEAT-LSDYEW 345
CE L P+ E + L D W
Sbjct: 351 CEGLAPVDEVSELYDRYW 368
>gi|310659049|ref|YP_003936770.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
gi|308825827|emb|CBH21865.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
Length = 345
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
+ + ++ PY WGTM I Y K+K ++ W LW P+ G+I M++SPR+ IG L
Sbjct: 120 KDQKYSVPYLWGTMGIVYNKTKVSD----SVDSWDILWNPKYEGQIIMLDSPRDTIGITL 175
Query: 155 KYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
K +G S N+ N +L+ A + Q+ L R ++ Y G+ +++ WS
Sbjct: 176 KKLGYSLNTKNPAELEEAKQALIEQKKL------VRSYEVDTYKGQMIAGEAAMSLAWSG 229
Query: 214 DVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASRLETKQIGGRVRGPSPLIHQWIEFC 272
D + + ++A +PK G +LW D AIP A+ E +I +I F
Sbjct: 230 DAMLLMSENEDLAYAIPKEGTNLWFDCMAIPTTAAHKEEAEI-------------FINFM 276
Query: 273 LQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQDTN 315
++ A E I ++P+ E L LPEE + + P D N
Sbjct: 277 MRPDIAAR-NSEYIKYSTPN--EAALELLPEEEVNNEYLYPKGDLN 319
>gi|427723684|ref|YP_007070961.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427355404|gb|AFY38127.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 386
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 116/247 (46%), Gaps = 35/247 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVI 150
DP G ++ P WGT + Y KS + AP DW LW +L R++++N REV+
Sbjct: 157 DP-GNSYSIPISWGTTGLIYNKSALDE---APT-DWNYLWDNADKLQRRMTLLNDVREVL 211
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ LK +G SYNS + QV + + L L F+S + GD+ VA+
Sbjct: 212 GASLKSLGYSYNSTE-EAQVK----AAYERLVELRPAIASFNSDAWRTQILSGDLLVAMC 266
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+SSD + N A VVP SG+S+WAD IP R P + W+
Sbjct: 267 YSSDANEITEEDDNFAYVVPSSGSSVWADTLVIP------------RTAPNVPGAYAWMS 314
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F ++ + Q + A+P+ L LPE+ ++ P NL P +E + RCE
Sbjct: 315 FMMRAQVSAEITQR-LSFATPNRPGYEL--LPED-VRTNP----NLF---PSSETIDRCE 363
Query: 331 FLEPLSE 337
L+PL E
Sbjct: 364 GLKPLGE 370
>gi|423509201|ref|ZP_17485732.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
gi|402456492|gb|EJV88265.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNDKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA-----FDTDNIKQKFITADAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|228984460|ref|ZP_04144638.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775326|gb|EEM23714.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVVG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|158321557|ref|YP_001514064.1| extracellular solute-binding protein [Alkaliphilus oremlandii
OhILAs]
gi|158141756|gb|ABW20068.1| extracellular solute-binding protein family 1 [Alkaliphilus
oremlandii OhILAs]
Length = 348
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 38/247 (15%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
+ DP + ++ PY WGT+ + Y + ++ P++ W+ LW + AG+I M++S R+ I
Sbjct: 120 DFDPSNE-YSVPYMWGTVGLLYDTTVVKE----PVDSWELLWDEKYAGQILMMDSQRDSI 174
Query: 151 GSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI-GDVWVA 208
G LK +G S NS ++ +L++A ++ Q+ L + A + D +K I G+ +A
Sbjct: 175 GITLKKLGFSVNSRDSKELELAKQELIRQKPLVM----AYVVDE---VKDMMIGGEAAIA 227
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
+ WS D + + + +A VVPK G++LW D IP +++ L ++
Sbjct: 228 IAWSGDAMLMMGQNEKLAYVVPKEGSNLWFDNMVIPKSAK------------NKELAEKF 275
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I F + +L E I ++P+ T+ L EELL N V P +I+
Sbjct: 276 INFMTRPEISLK-NVEYIEYSTPNT--GTMELLDEELL--------NNPVAYPSDDIVDN 324
Query: 329 CE-FLEP 334
CE FL+P
Sbjct: 325 CEVFLDP 331
>gi|402553230|ref|YP_006594501.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
gi|401794440|gb|AFQ08299.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|167634382|ref|ZP_02392703.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170686738|ref|ZP_02877958.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|254682552|ref|ZP_05146413.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CNEVA-9066]
gi|254726214|ref|ZP_05187996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A1055]
gi|254740343|ref|ZP_05198034.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Kruger B]
gi|421637888|ref|ZP_16078485.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
gi|167530270|gb|EDR92996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170669261|gb|EDT20004.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|403395447|gb|EJY92686.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
Length = 345
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 116 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 170
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 171 MGLKKNGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 224
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 225 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|229084376|ref|ZP_04216656.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
gi|228698916|gb|EEL51621.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
Length = 360
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 131 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLG 185
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 186 MGLKKNGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 239
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 240 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 277
>gi|423366876|ref|ZP_17344309.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
gi|401086856|gb|EJP95075.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASADLQKLLPNLLA-----FDTDNIKQKFITADAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K ++ VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDIEYVVPKEGGTIWADTLAIPKGAK 266
>gi|30261391|ref|NP_843768.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Ames]
gi|47526566|ref|YP_017915.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49184220|ref|YP_027472.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Sterne]
gi|65318655|ref|ZP_00391614.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Bacillus anthracis str. A2012]
gi|165870372|ref|ZP_02215027.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167639331|ref|ZP_02397603.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170706266|ref|ZP_02896727.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|177651500|ref|ZP_02934289.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190568736|ref|ZP_03021640.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227815871|ref|YP_002815880.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus anthracis str. CDC 684]
gi|229602179|ref|YP_002865806.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|254733970|ref|ZP_05191684.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Western North America USA6153]
gi|254753730|ref|ZP_05205765.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Vollum]
gi|254758826|ref|ZP_05210853.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Australia 94]
gi|386735088|ref|YP_006208269.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|421507071|ref|ZP_15953992.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
gi|30255245|gb|AAP25254.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Ames]
gi|47501714|gb|AAT30390.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178147|gb|AAT53523.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Sterne]
gi|164713867|gb|EDR19389.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167512770|gb|EDR88144.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170128800|gb|EDS97666.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|172082778|gb|EDT67841.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190560152|gb|EDV14133.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227005570|gb|ACP15313.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CDC 684]
gi|229266587|gb|ACQ48224.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|384384940|gb|AFH82601.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|401822723|gb|EJT21872.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
Length = 345
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 116 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 170
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 171 MGLKKNGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 224
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 225 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|196040686|ref|ZP_03107985.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|229090340|ref|ZP_04221584.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
gi|196028476|gb|EDX67084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|228693034|gb|EEL46751.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|418293170|ref|ZP_12905089.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064572|gb|EHY77315.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 361
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L I+ +P+ ++ +W + L L++ND G AAP
Sbjct: 73 DVVVPSNHFLGKQIRAGAFQPLDKSKLPNW-ENLDPALLKQLQKNDPG------NAHAAP 125
Query: 103 YRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K + + IE W ++ PE A + I+ ++S E+I ++L Y
Sbjct: 126 YLWGTNGIGYNVEKVKAALGVDEIESWSVIFEPENAAKLASCGIAFLDSADEMIPAMLNY 185
Query: 157 MGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G NS N D Q A ++ L + R F S+ Y+ G++ VA G+S DV
Sbjct: 186 LGLDPNSQNAADYQKA------EEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDV 239
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 247
A R +A +PK GA+LW D+ AIPA S
Sbjct: 240 FQAAARAEEAGKGIEIAYAIPKEGANLWFDMLAIPADS 277
>gi|228932668|ref|ZP_04095542.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228826986|gb|EEM72746.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229138074|ref|ZP_04266672.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
gi|229195584|ref|ZP_04322350.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228587833|gb|EEK45885.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228645419|gb|EEL01653.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
Length = 306
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 77 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 131
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 132 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 185
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 186 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 223
>gi|49480039|ref|YP_035515.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144048|ref|YP_082781.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus E33L]
gi|118476862|ref|YP_894013.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis str. Al Hakam]
gi|196035369|ref|ZP_03102774.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196046554|ref|ZP_03113779.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218902495|ref|YP_002450329.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus AH820]
gi|225863250|ref|YP_002748628.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus 03BB102]
gi|228913957|ref|ZP_04077581.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228926418|ref|ZP_04089490.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228944986|ref|ZP_04107347.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120927|ref|ZP_04250169.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|229183580|ref|ZP_04310804.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|301052926|ref|YP_003791137.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus biovar anthracis str. CI]
gi|376265229|ref|YP_005117941.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|423552877|ref|ZP_17529204.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
gi|49331595|gb|AAT62241.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51977517|gb|AAU19067.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
E33L]
gi|118416087|gb|ABK84506.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis str. Al Hakam]
gi|195992046|gb|EDX56009.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196022738|gb|EDX61420.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218536733|gb|ACK89131.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH820]
gi|225787506|gb|ACO27723.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB102]
gi|228599990|gb|EEK57586.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|228662587|gb|EEL18185.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|228814655|gb|EEM60915.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228833242|gb|EEM78807.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228845679|gb|EEM90706.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300375095|gb|ADK03999.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
biovar anthracis str. CI]
gi|364511029|gb|AEW54428.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|401185490|gb|EJQ92584.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|42780475|ref|NP_977722.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus ATCC 10987]
gi|42736394|gb|AAS40330.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10987]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423420670|ref|ZP_17397759.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
gi|401101237|gb|EJQ09228.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|384179321|ref|YP_005565083.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325405|gb|ADY20665.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229029058|ref|ZP_04185157.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
gi|228732338|gb|EEL83221.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423576894|ref|ZP_17553013.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|423606908|ref|ZP_17582801.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
gi|401206644|gb|EJR13432.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|401241098|gb|EJR47490.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229154954|ref|ZP_04283068.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
gi|228628512|gb|EEK85225.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229016632|ref|ZP_04173570.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
gi|229022847|ref|ZP_04179368.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228738458|gb|EEL88933.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228744663|gb|EEL94727.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|206977547|ref|ZP_03238441.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217958863|ref|YP_002337411.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|222095022|ref|YP_002529082.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus Q1]
gi|375283358|ref|YP_005103796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus NC7401]
gi|423354129|ref|ZP_17331755.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|423371369|ref|ZP_17348709.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|423569696|ref|ZP_17545942.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
gi|206744265|gb|EDZ55678.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217065950|gb|ACJ80200.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|221239080|gb|ACM11790.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Q1]
gi|358351884|dbj|BAL17056.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NC7401]
gi|401087330|gb|EJP95534.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|401103195|gb|EJQ11180.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|401205915|gb|EJR12713.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
Length = 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|257877440|ref|ZP_05657093.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
gi|257811606|gb|EEV40426.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
Length = 357
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 45/271 (16%)
Query: 92 IDPR--------GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
IDPR G ++ PY WGT+ I Y F + I W DLW+PELA I ++
Sbjct: 117 IDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDE---GVITQWDDLWKPELANSIMLI 173
Query: 144 NSPREVIGSVLKYMGASYNSNNID-LQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAF 200
+ REV+G L +G S NS + D LQ A K+ ++ N+ A++A++ +++ +
Sbjct: 174 DGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVADEIKMYMANE----- 228
Query: 201 GIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRG 260
+ VAV +S + + ++ V+P G++LW D IP S+ E+
Sbjct: 229 ---EASVAVTFSGEAADMMYENEHIHYVIPSEGSNLWFDNMVIPKTSQNESGA------- 278
Query: 261 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
+ ++ F L+ A E I ++P+ + + LP+E+ ++D
Sbjct: 279 -----YAFLNFMLEPENAAQ-NAEYIGYSTPN--QAAMALLPDEI-----TEDEQF---Y 322
Query: 321 PPAEILARCEFLEPLSEATLSDYEWLVADLQ 351
P E++ E E L L Y L +L+
Sbjct: 323 PSDELMEHLEVYENLGAEYLGIYNDLFLELK 353
>gi|257867366|ref|ZP_05647019.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257873697|ref|ZP_05653350.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
gi|257801422|gb|EEV30352.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257807861|gb|EEV36683.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
Length = 357
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 45/271 (16%)
Query: 92 IDPR--------GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
IDPR G ++ PY WGT+ I Y F + I W DLW+PELA I ++
Sbjct: 117 IDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDE---GEITQWDDLWKPELANSIMLI 173
Query: 144 NSPREVIGSVLKYMGASYNSNNID-LQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAF 200
+ REV+G L +G S NS + D LQ A K+ ++ N+ A++A++ +++ +
Sbjct: 174 DGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVADEIKMYMANE----- 228
Query: 201 GIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRG 260
+ VAV +S + + ++ V+P G++LW D IP S+ E
Sbjct: 229 ---EASVAVTFSGEAADMMYENEHIHYVIPSEGSNLWFDNMVIPKTSQNEAGA------- 278
Query: 261 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
+ ++ F L+ A E I ++P+ + + LP+E+ ++D
Sbjct: 279 -----YAFLNFMLEPENAAQ-NAEYIGYSTPN--QAAMALLPDEI-----TEDEQF---Y 322
Query: 321 PPAEILARCEFLEPLSEATLSDYEWLVADLQ 351
P E++ E E L L Y L +L+
Sbjct: 323 PSDELMEHLEVYENLGAEYLGIYNDLFLELK 353
>gi|167630347|ref|YP_001680846.1| spermidine/putrescine abc transporter spermidine/putrescine-binding
protein [Heliobacterium modesticaldum Ice1]
gi|167593087|gb|ABZ84835.1| spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Heliobacterium
modesticaldum Ice1]
Length = 369
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 33/246 (13%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP G + Y WG IAY +K+ K PI W+DLW P+ GR+ ++N REV+G
Sbjct: 141 FDP-GNKHSVVYTWGITGIAYN-TKYVKE---PISSWQDLWNPKYKGRLVLLNDSREVLG 195
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
LK G S NS ++ +L LA FD+ + F + W+ W
Sbjct: 196 MALKKNGFS-NSTKDQKELD----KAFNDLKTLAPNVLAFDTDDIKQKFITEEAWIGTMW 250
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
S D K +VA V+PK G ++WAD AIP ++ L Q+I +
Sbjct: 251 SGDAAFVYKDNKDVAFVIPKEGTTIWADTLAIPKGAK------------HRELAEQFINY 298
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
++ ++ E I ++P+ E + EE K N ++ + +EI A+ E+
Sbjct: 299 LMEPEVSVK-NYEFIGYSNPN--EKAFAQHSEEYRK-------NPMINLSKSEI-AKGEW 347
Query: 332 LEPLSE 337
L+ + +
Sbjct: 348 LQDVGD 353
>gi|325568827|ref|ZP_08145120.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|420263774|ref|ZP_14766410.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
gi|325157865|gb|EGC70021.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|394769216|gb|EJF49079.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
Length = 357
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 45/271 (16%)
Query: 92 IDPR--------GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
IDPR G ++ PY WGT+ I Y F + I W DLW+PELA I ++
Sbjct: 117 IDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDE---GEITQWDDLWKPELANSIMLI 173
Query: 144 NSPREVIGSVLKYMGASYNSNNID-LQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAF 200
+ REV+G L +G S NS + D LQ A K+ ++ N+ A++A++ +++ +
Sbjct: 174 DGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVADEIKMYMANE----- 228
Query: 201 GIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRG 260
+ VAV +S + + ++ V+P G++LW D IP S+ E
Sbjct: 229 ---EASVAVTFSGEAADMMYENEHIHYVIPSEGSNLWFDNMVIPKTSQNEAGA------- 278
Query: 261 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
+ ++ F L+ A E I ++P+ + + LP+E+ ++D
Sbjct: 279 -----YAFLNFMLEPENAAQ-NAEYIGYSTPN--QEAMALLPDEI-----TEDEQF---Y 322
Query: 321 PPAEILARCEFLEPLSEATLSDYEWLVADLQ 351
P E++ E E L L Y L +L+
Sbjct: 323 PSDELMEHLEVYENLGAEYLGIYNDLFLELK 353
>gi|423609801|ref|ZP_17585662.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
gi|401250283|gb|EJR56584.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
Length = 349
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNDKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228920100|ref|ZP_04083449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|423579582|ref|ZP_17555693.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|423637961|ref|ZP_17613614.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
gi|228839556|gb|EEM84848.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|401218044|gb|EJR24729.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|401272763|gb|EJR78754.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
Length = 349
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + GR++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGRVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +++ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|428311756|ref|YP_007122733.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428253368|gb|AFZ19327.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 378
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 122/256 (47%), Gaps = 39/256 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 150
DP G ++ P WGT + Y K ++ AP EDW LW + +L+ R++++N REV+
Sbjct: 149 DP-GNQYSVPVSWGTTGLIYNPKKLKQ---AP-EDWSYLWENQQQLSKRMTLLNDVREVM 203
Query: 151 GSVLKYMGASYNSNNID-LQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
G+ LK +G SYNS + +Q A K+ ++ NLA F S + GD+ VA
Sbjct: 204 GATLKMLGYSYNSTDPQHIQQAYQKLMDLKSNLAS-------FTSDAWRPQVLSGDLSVA 256
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
+ +S+D + ++ VVPKSG+SLW D AIP ++ V G + W
Sbjct: 257 MCYSADANEVMGENESLEYVVPKSGSSLWMDTLAIPKSA--------PNVEG----AYAW 304
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I F LQ A + + A+P+ +E K P + PP IL
Sbjct: 305 INFMLQPDVAAEVCKR-LSFATPN----------QEAFKLLPPDVKSNQSLFPPEAILET 353
Query: 329 CEFLEPLSEATLSDYE 344
CE + P+ E+ + Y+
Sbjct: 354 CESIAPVPESISAVYD 369
>gi|313884789|ref|ZP_07818543.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619988|gb|EFR31423.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
Length = 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 40/255 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP+ + ++ PY WGT+ I Y S + I DW DLW P G+I M++ RE+IG
Sbjct: 127 DPQNQ-YSVPYFWGTLGIIYNTSMIEE---GSIRDWADLWNPAYQGKILMIDGAREMIGI 182
Query: 153 VLKYMGASYNSNNID---LQVAGGKISVQQNLALLANQARLFDSTHYLKA-FGIGDVWVA 208
L+ +G Y+ N+ID ++ A K+ L+ N L T +K G+V +A
Sbjct: 183 GLQSLG--YSLNDIDSSHIRAAADKMKT-----LMPNVVGLI--TDEIKMHIAEGEVPLA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
V +S + A+ + ++A VVP+ G++LW D +AIP +I V G LI+
Sbjct: 234 VTFSGEAATAMDQNEDLAYVVPEKGSNLWLDTFAIP--------KIADNVEGAYALINFL 285
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I A A E + A+P+ +E LP+E+ K P I+ +
Sbjct: 286 ISKEASIANA-----EYVGYATPN-MEAK-AALPKEITDDK--------AFYPDQAIMDK 330
Query: 329 CEFLEPLSEATLSDY 343
E L +A L +Y
Sbjct: 331 LEVYRNLGQAKLIEY 345
>gi|154246279|ref|YP_001417237.1| extracellular solute-binding protein [Xanthobacter autotrophicus
Py2]
gi|154160364|gb|ABS67580.1| extracellular solute-binding protein family 1 [Xanthobacter
autotrophicus Py2]
Length = 368
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 100 AAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSV 153
A Y WGT I Y K ++ P+ W +++PE+ + + ++ P EVI S
Sbjct: 125 AVNYMWGTTGIGYNVDKVKERLGDIPMNTWDIVFKPEILSKLKDCGVYFLDGPEEVIPSA 184
Query: 154 LKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
+KY+G NS N D G++ L + + FDS+ Y+ A GD+ +AVGWS
Sbjct: 185 MKYLGLDPNSKNPDDIAKAGEL-----LMSVRPYIKKFDSSGYINALARGDICLAVGWSG 239
Query: 214 DVLPAVKRMS-----------NVAVVVPKSGASLWADLWAIPAASR 248
DV A R + NVA V+PK GA +W D +AIP ++
Sbjct: 240 DVFQAKTRAAEAAKKTKKPPVNVAYVIPKQGALMWFDNFAIPKDAK 285
>gi|427708603|ref|YP_007050980.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427361108|gb|AFY43830.1| extracellular solute-binding protein family 1 [Nostoc sp. PCC 7107]
Length = 360
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 119/243 (48%), Gaps = 38/243 (15%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 156
++ P+ WGT + Y + AP EDW LW+ + L R++++N REV+G+VL+
Sbjct: 137 YSLPFNWGTTGLIYNSEVLQT---AP-EDWDYLWQNQSILNKRMTLLNDVREVMGAVLRM 192
Query: 157 MGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G SYNS +L+ A K+ QQ +A+ FD+ + GD+ +A+ +S+D
Sbjct: 193 LGYSYNSKEEEELKQAYNKL--QQLKPAIAS----FDTDAWQNQILSGDLVLAMCYSADA 246
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ +K V+P+SG+SLW D +P ++ I G + WI F LQ
Sbjct: 247 IRVIKENPKFKYVIPRSGSSLWTDTIVVPKSA----PNIDG--------AYAWINFILQP 294
Query: 276 ARALPFKQEV-IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEP 334
A Q + I + + E +LP++L K NL P A +L +CE + P
Sbjct: 295 EVAAIISQNLNISTPNGAGFE----QLPKKLQDNK-----NLF---PEAALLEKCERITP 342
Query: 335 LSE 337
L +
Sbjct: 343 LGD 345
>gi|411118601|ref|ZP_11390982.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410712325|gb|EKQ69831.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 375
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 123/258 (47%), Gaps = 41/258 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVI 150
DP G + P WGT + Y N P EDW+DLW+ P+L ++++++ REVI
Sbjct: 144 DP-GNRHSVPISWGTTGLIYNTEAL---NPGP-EDWQDLWQMQPQLNRKMTLLSDVREVI 198
Query: 151 GSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G+ LK +G SYNS N +++ A K+ VQ A+ F + + +GD+ +++
Sbjct: 199 GASLKSLGYSYNSTNPSEIKRAYEKL-VQLKPAIAT-----FTTDAWRDRLLVGDLLLSM 252
Query: 210 GWSSDVLPAVKRMSNVAV--VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIH 266
+S+D + ++ + + V+PKSG SLW+D IP S P+P +
Sbjct: 253 AYSADAVRLIQENPDTKLRYVIPKSGTSLWSDAMVIPTTS-------------PNPDAAY 299
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
WI F +Q + A+ Q + A+P+ + +LP L + PP EI+
Sbjct: 300 AWINFMMQPSVAVDVTQRLF-FATPN--QAAYDQLPAPLRNNRSL--------FPPEEII 348
Query: 327 ARCEFLEPLSEATLSDYE 344
CE + PL Y+
Sbjct: 349 KACERIIPLEAKVTELYD 366
>gi|423392318|ref|ZP_17369544.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
gi|401634965|gb|EJS52727.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
Length = 349
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V +VPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYIVPKEGGTIWADTLAIPKGAK 266
>gi|110632525|ref|YP_672733.1| extracellular solute-binding protein [Chelativorans sp. BNC1]
gi|110283509|gb|ABG61568.1| extracellular solute-binding protein, family 1 [Chelativorans sp.
BNC1]
Length = 365
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 46/253 (18%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRP 134
LS+ W R DP G ++ Y WGT I Y K+K ++ I W +++P
Sbjct: 106 LSNMWDFVSER--TAVYDP-GNEYSVNYMWGTTGIGYNKAKVKEALGTDRINSWDVVFKP 162
Query: 135 ELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQ-VAGGKISVQQNLALLANQ 187
E+A + I ++++ E+ + L Y+G NS+N DLQ V +SV+ N+
Sbjct: 163 EVASKLAGCGIHVLDASSEITHAALNYLGLDPNSDNPDDLQKVEALLLSVRPNI------ 216
Query: 188 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 241
R F S+ Y+ A GD+ VAVG+S DV A R + +A +PK GA +W D
Sbjct: 217 -RKFHSSEYINALANGDICVAVGYSGDVFQARDRAAEAGQGVEIAYAIPKEGAQMWFDQM 275
Query: 242 AIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
AIPA A +E H++I + + + EVI AS K
Sbjct: 276 AIPADAPHVEEA-------------HEFINYMM--------RPEVIAKASNYVFYANGNK 314
Query: 301 LPEELLKGKPSQD 313
+ELL + D
Sbjct: 315 ASQELLDAEVIDD 327
>gi|428306605|ref|YP_007143430.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428248140|gb|AFZ13920.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 376
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 37/255 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 150
DP + ++ P WGT + Y +K + +DW LW + +L+ ++++ N REV+
Sbjct: 147 DPDNR-YSVPMTWGTTGLIYNTTKLKNQP----QDWNYLWDQQKQLSRKMTLQNDLREVM 201
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ LK +G SYNS + Q+ + LA L F S + GD+ VA+
Sbjct: 202 GATLKMLGYSYNSTDPQ-QIK----QAYEKLAQLKPSIASFTSDAWRSQILTGDLLVAMC 256
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWI 269
SSD + N+ V+P+SG+SLW D IP + P+P + WI
Sbjct: 257 VSSDANDLIPEAENLQYVLPRSGSSLWTDTLVIPKTA-------------PNPEAAYAWI 303
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
+ LQ Q + A+P+ + L LP + ++ P V PP +LA+C
Sbjct: 304 NYMLQPEVTAAICQR-LSFATPNKVAFNL--LPPD-VRDNP-------VLFPPESLLAKC 352
Query: 330 EFLEPLSEATLSDYE 344
E + PL + YE
Sbjct: 353 EGIAPLPDKVKEIYE 367
>gi|392957073|ref|ZP_10322598.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
gi|391876975|gb|EIT85570.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
Length = 357
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 35/259 (13%)
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
RG ++ PY WGT+ I Y K N I W+DLW +L +I +V+ RE++G L
Sbjct: 128 RGNTYSVPYFWGTVGIVYNKKLLGNKN---ITSWQDLWDKDLRNKIFLVDGVREIMGIGL 184
Query: 155 KYMGASYN-SNNIDLQVAGGKISVQQNLALLAN-QARLFDSTHYLKAFGIGDVWVAVGWS 212
G S N +N+ LQ A K+ L+ N +A + D T L A G D + +GWS
Sbjct: 185 TTTGYSLNDTNHQHLQKAKRKLD-----TLIPNVRAIVGDETKLLLANG--DASIGIGWS 237
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFC 272
+ + ++ V+PK G++LW D IP ++ + + Q++ F
Sbjct: 238 GNAAEIIDENPDLDYVIPKEGSNLWFDNMVIPKTAKNKKAAL------------QFMNFM 285
Query: 273 LQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFL 332
L A E + +SP+ + L LP+E+ S D PP +I + E
Sbjct: 286 LDPKVAAQ-NTEYVHYSSPN--KAALKYLPKEI-----STDKRF---YPPKKITDQLEVY 334
Query: 333 EPLSEATLSDYEWLVADLQ 351
LS+ +S + L + +
Sbjct: 335 RNLSQKDISYFNELFLEFK 353
>gi|157375531|ref|YP_001474131.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
gi|157317905|gb|ABV37003.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
Length = 358
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 32/240 (13%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP--ELAGRISMVNSPREVIGSVLKY 156
+A PY WGT+ I Y+ ++ PI WK L+ P +L G++ M++ PR++IG LK
Sbjct: 133 YAIPYFWGTVGIVYRHDVIKE----PITHWKQLYSPAPDLKGKLGMIDEPRDLIGMGLKS 188
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
+G S NS + LQ+ + +Q A++ + + H G++ ++ ++ D L
Sbjct: 189 LGYSANS-EVSLQLNEVEEVLQSQKAMVNSYIYMTLDEH--SPIVTGEILASMIYNGDAL 245
Query: 217 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTA 276
+ N+ V+P+ G ++W D IG + + P L + ++ F Q
Sbjct: 246 MVKEHSENLTFVLPEEGGAIWVDYLT-----------IGAKAKEPD-LAYAFLNFINQAE 293
Query: 277 RALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLS 336
A Q V A+P+ L LP+E L K V P A+ L EF +PLS
Sbjct: 294 HAAQLAQYVY-YATPNLAAEKL--LPDEFLNDK--------VIYPDADSLKNSEFYKPLS 342
>gi|423460733|ref|ZP_17437530.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
gi|401140786|gb|EJQ48342.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
Length = 349
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAANDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229132181|ref|ZP_04261039.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
gi|228651328|gb|EEL07305.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
Length = 349
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|163939195|ref|YP_001644079.1| extracellular solute-binding protein [Bacillus weihenstephanensis
KBAB4]
gi|229010675|ref|ZP_04167875.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|229057017|ref|ZP_04196411.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|229166221|ref|ZP_04293981.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|423486501|ref|ZP_17463183.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
gi|423492225|ref|ZP_17468869.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|423500984|ref|ZP_17477601.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|423516040|ref|ZP_17492521.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|423594690|ref|ZP_17570721.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|423601276|ref|ZP_17577276.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|423663736|ref|ZP_17638905.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|423667066|ref|ZP_17642095.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|423676900|ref|ZP_17651839.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|163861392|gb|ABY42451.1| extracellular solute-binding protein family 1 [Bacillus
weihenstephanensis KBAB4]
gi|228617319|gb|EEK74384.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|228720294|gb|EEL71870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|228750640|gb|EEM00466.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|401154308|gb|EJQ61726.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|401156509|gb|EJQ63913.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|401165883|gb|EJQ73193.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|401223642|gb|EJR30210.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|401230703|gb|EJR37209.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|401295636|gb|EJS01260.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|401304510|gb|EJS10062.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|401307161|gb|EJS12618.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|402439282|gb|EJV71289.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
Length = 349
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|149187665|ref|ZP_01865962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
gi|148838545|gb|EDL55485.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
Length = 369
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 26/177 (14%)
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS----- 141
A +DP ++ PY WGT I Y +K ++ AP++ W +++PE ++S
Sbjct: 120 ADTVDPDNA-YSVPYLWGTTGIGYNVAKVKEVLGEDAPVDSWDLVFKPENMEKLSKCGVG 178
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR----LFDSTHYL 197
+N+P E++ + L Y+G NS + + + +++ L Q R F S+ Y+
Sbjct: 179 FLNAPTEIMAAALNYIGKDPNSTDPN--------AYKKDALALLKQVRPYVTYFHSSQYI 230
Query: 198 KAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GDV VA+GWS DVL A R + VA +PK GA W DL AIP ++
Sbjct: 231 NDLANGDVCVAIGWSGDVLQAADRAAEADNGVEVAYSIPKEGALAWFDLMAIPKEAK 287
>gi|433448387|ref|ZP_20411319.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
gi|429539858|gb|ELA07892.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
Length = 364
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 26/223 (11%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
F K+K Y D+ + +S ++EP+ D K L + + +L++
Sbjct: 81 FTKIKQGGTSY---DIAVPSEYMVSKMTNADMLEPL----DYSRLKGLDNLDENFLKQ-- 131
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ DP+ ++ PY WGT+ I Y + I+ W DLWRPE +I +V+S R+
Sbjct: 132 --DFDPKN-TYSLPYFWGTLGIVYNDQMVDGN---KIKTWNDLWRPEFKKKIMLVDSARD 185
Query: 149 VIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDV 205
++G L GAS N+ N+ +L A GK+ ++ N+ A++A++ +++ +
Sbjct: 186 ILGMTLVSNGASVNTKNLPELAAADGKLATLMPNVKAIVADEIKMY--------MAQNEA 237
Query: 206 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+AV +S + + R ++ VVPK G +LW D + IP R
Sbjct: 238 AIAVDYSGNAAEMMSRNEHLQYVVPKEGGNLWLDNFVIPKTVR 280
>gi|229074647|ref|ZP_04207670.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|229095872|ref|ZP_04226851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|229101987|ref|ZP_04232701.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|229114826|ref|ZP_04244240.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|407703754|ref|YP_006827339.1| glycolate oxidase [Bacillus thuringiensis MC28]
gi|423380811|ref|ZP_17358095.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|423443843|ref|ZP_17420749.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|423445901|ref|ZP_17422780.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|423466935|ref|ZP_17443703.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|423536331|ref|ZP_17512749.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|423538424|ref|ZP_17514815.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|423544663|ref|ZP_17521021.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|423625631|ref|ZP_17601409.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|228668891|gb|EEL24319.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|228681570|gb|EEL35733.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|228687705|gb|EEL41604.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|228708529|gb|EEL60679.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|401132994|gb|EJQ40627.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|401177008|gb|EJQ84200.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|401183638|gb|EJQ90750.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|401254469|gb|EJR60698.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|401631563|gb|EJS49360.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|402411975|gb|EJV44337.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|402414739|gb|EJV47066.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|402461168|gb|EJV92882.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|407381439|gb|AFU11940.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis MC28]
Length = 349
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D ++ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAELKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423618467|ref|ZP_17594301.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
gi|401254198|gb|EJR60434.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
Length = 349
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D ++ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAELKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423481266|ref|ZP_17457956.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
gi|401146026|gb|EJQ53546.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
Length = 349
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|28900222|ref|NP_799877.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|260361653|ref|ZP_05774680.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
gi|260880784|ref|ZP_05893139.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|260896506|ref|ZP_05905002.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|260899480|ref|ZP_05907875.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|28808533|dbj|BAC61710.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|308089236|gb|EFO38931.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|308092107|gb|EFO41802.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|308109246|gb|EFO46786.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|308112748|gb|EFO50288.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
Length = 344
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 41/256 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP+ ++ PY WG I+Y +S + P+ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAV 209
LK G S N+ + + ++Q +L L N L++S + G+ V +
Sbjct: 172 ALKKNGHSVNTKD--------EAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGM 223
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
W+ + M + V+P+ GA LW D + IP+ S+ +T L H++I
Sbjct: 224 QWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKT------------LAHKFI 271
Query: 270 EFCLQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
F Q+ + E++ SA KLPEEL + P +E + +
Sbjct: 272 NFMYQSEN----QAEIVTSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKK 319
Query: 329 CEFLEPLSEATLSDYE 344
EF+ + TL+ YE
Sbjct: 320 GEFINDVGAETLAIYE 335
>gi|423472737|ref|ZP_17449480.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
gi|402427298|gb|EJV59407.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
Length = 349
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|229160340|ref|ZP_04288338.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
gi|228623064|gb|EEK79892.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
Length = 349
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---VPTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS +D ++ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKVDAELKTASNDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423555852|ref|ZP_17532155.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
gi|401196194|gb|EJR03140.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
Length = 349
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423455165|ref|ZP_17432018.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
gi|401134948|gb|EJQ42555.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
Length = 349
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|47566174|ref|ZP_00237202.1| PotD [Bacillus cereus G9241]
gi|47556727|gb|EAL15058.1| PotD [Bacillus cereus G9241]
Length = 349
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---VPTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|119510563|ref|ZP_01629694.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
gi|119464830|gb|EAW45736.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
Length = 360
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 37/248 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 150
DP + + P+ WGT Y +K + P +DW LW+ + L RI+++N REV+
Sbjct: 132 DPNNR-HSIPFNWGTTGFIYNSAKLKN----PPQDWDYLWQNQELLNRRITLLNDVREVM 186
Query: 151 GSVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G VL+ +G SYNS + + +Q A K+ V+ A+ + F++ + GD+ +A+
Sbjct: 187 GGVLRMLGYSYNSQDENQIQQAYEKL-VELKPAIAS-----FNTDAWQNQLLAGDLTLAM 240
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
+S+D + + V+P+SG+SLW D IP ++ + G + WI
Sbjct: 241 CYSADAIRITQENPQFKYVIPRSGSSLWTDTIVIPKSA----PNLDG--------AYAWI 288
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
+ LQ A Q + +L T + E+L P N PP E+L +C
Sbjct: 289 NYMLQPDIAASISQRL-------SLATPNMAGFEQL----PQNIQNNANWFPPQELLEKC 337
Query: 330 EFLEPLSE 337
E + PL +
Sbjct: 338 ERIAPLGD 345
>gi|426409667|ref|YP_007029766.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
gi|426267884|gb|AFY19961.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
Length = 362
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K + + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKAVLGIDKIDSWAVL 156
Query: 132 WRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLA 185
+ PE A +SM++S EV +VL YMG S N D + A K L +
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAK------LLQIR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW D
Sbjct: 211 PYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|428211500|ref|YP_007084644.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|427999881|gb|AFY80724.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 376
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPRE 148
E DP G ++ P+ WGT + Y ++ P +DW+ LW + EL+ R++++N RE
Sbjct: 145 EYDP-GNRYSVPFTWGTTGLIYNSARLS----TPPDDWEYLWTHQSELSRRLTLMNDVRE 199
Query: 149 VIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
V+G+ L+ +G SYNS + A + V AL AN F + + GD+ VA
Sbjct: 200 VMGAGLRSLGYSYNSTDPAQLRAAYEHLVNLKPAL-AN----FTTDGWRDLILAGDLEVA 254
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
+G+S D L ++ VVP SG+SLW D IP + V+G + W
Sbjct: 255 MGFSFDALSVSDENPDLEYVVPMSGSSLWTDTMVIP--------RNAPNVQG----AYAW 302
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE-ILA 327
I F Q P + +E P SQ+ + P+E +L
Sbjct: 303 INFMFQ------------PQVTADLIERLYFATPNRAAYNLLSQELRENPTLFPSESVLE 350
Query: 328 RCEFLEPLS 336
RCE + PLS
Sbjct: 351 RCEGILPLS 359
>gi|338997731|ref|ZP_08636423.1| extracellular solute-binding protein [Halomonas sp. TD01]
gi|338765360|gb|EGP20300.1| extracellular solute-binding protein [Halomonas sp. TD01]
Length = 367
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 42/256 (16%)
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-------MVNS 145
+G ++ PY WGT + Y + + + AP++ W L+ PE+ ++S M++S
Sbjct: 121 KGSEYSVPYMWGTNGLGYNVDRVTEILGDDAPVDSWALLFDPEITKQLSDAGCGLAMLDS 180
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ + Y+G S S NI+ AGG++ +A + + F S+ Y+ GD+
Sbjct: 181 GDEMLSPAMAYLGLSPLSENIEDLEAGGEL-----IANIRDNITYFHSSRYVSDLANGDI 235
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGRV 258
VA G+S D+ A R + +PK GA+LW D+ A+PA A E
Sbjct: 236 CVAAGYSGDIFQAADRAEEAGRDFTIGYSIPKEGAALWFDMMAVPADAPNTENA------ 289
Query: 259 RGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKG---KPSQDT- 314
H +I F L+ A E + A+P+A L +ELL P D
Sbjct: 290 -------HAFINFILEPEIAAEIS-EYVRYANPNAAANEY--LSDELLNDPAVYPETDVM 339
Query: 315 -NLIVGVPPAEILARC 329
NL V V + + R
Sbjct: 340 QNLYVAVEKPQDVQRA 355
>gi|229172027|ref|ZP_04299592.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|423404099|ref|ZP_17381272.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|423475271|ref|ZP_17451986.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
gi|228611370|gb|EEK68627.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|401647306|gb|EJS64915.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|402436373|gb|EJV68404.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
Length = 349
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +++ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDTQLKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|386826294|ref|ZP_10113401.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
gi|386427178|gb|EIJ41006.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
Length = 369
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVN 144
+DP K +A PY WGT I Y K + AP++ W +++PE ++S ++
Sbjct: 122 VDPENK-FAIPYLWGTTGIGYNPEKVKAALGENAPVDSWDLVFKPENLEKLSKCGVYFLD 180
Query: 145 SPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
+P EV VL Y+G S N D KI VQ + L F S+ Y+ A GD
Sbjct: 181 TPTEVFPIVLNYLGKEPLSENSDDYT---KI-VQPFMLKLRPFITNFHSSEYINALANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
+ VAVGWS DVL A R + V VPK G +W D+ AIP ++
Sbjct: 237 ICVAVGWSGDVLQAADRAAEANKGVKVEYSVPKEGTIMWVDMMAIPKDAK 286
>gi|443316510|ref|ZP_21045951.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783874|gb|ELR93773.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 382
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 47/259 (18%)
Query: 96 GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSV 153
G + P+ WGT + Y EDW LW + LA +I++++ RE +G+
Sbjct: 156 GNAHSVPFSWGTTGLLYNTEVVS----GTPEDWDYLWENQSSLARQITLLDDVRETMGAT 211
Query: 154 LKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
LK +G SYNS + +++ A ++ V+ AL + F S Y A GD+ V + +S
Sbjct: 212 LKSLGYSYNSTDPAEIEEAYERL-VEIKPALAS-----FMSFGYEDALFGGDLTVVMAYS 265
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS-PLIHQWIEF 271
D + A + +VP SG+S+W D IP ++ P+ ++W+ F
Sbjct: 266 VDAISATIEDDRMEYIVPASGSSVWTDTMVIPTSA-------------PNVDAAYEWMNF 312
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPE----ELLKGKPSQDTNLIVGVPPAEILA 327
L+ P S SA+E+ P +LL + + +L P E+LA
Sbjct: 313 MLE------------PEVSTSAVESLFFATPNAVSLDLLSDEVRNNEDLF---PSDEVLA 357
Query: 328 RCEFLEPLSEAT-LSDYEW 345
RCE + P+ +AT L D W
Sbjct: 358 RCEGIAPIGDATDLYDEYW 376
>gi|269967211|ref|ZP_06181276.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
gi|269828201|gb|EEZ82470.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
Length = 344
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 111/256 (43%), Gaps = 41/256 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP+ ++ PY WG I+Y +S + P++ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVKKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAV 209
LK G S N+ + + ++Q +L L N L++S + G+ V +
Sbjct: 172 ALKKNGHSVNTKD--------EAEIEQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGM 223
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
W+ + M + V+P+ GA LW D + IP+ S+ L H++I
Sbjct: 224 QWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFI 271
Query: 270 EFCLQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
F Q+ + E++ SA KLPEEL + P +E + +
Sbjct: 272 NFMYQSEN----QAEIVTSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKK 319
Query: 329 CEFLEPLSEATLSDYE 344
EF+ + TL+ YE
Sbjct: 320 GEFINDVGAETLAIYE 335
>gi|359395656|ref|ZP_09188708.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
gi|357969921|gb|EHJ92368.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
Length = 367
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 96 GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-------MVNSP 146
G ++ PY WGT I Y + ++ + AP++ W L+ PE+ +S M++S
Sbjct: 122 GSEYSVPYMWGTNGIGYNVDRVKEILGDDAPVDSWALLFDPEITAALSEAGCGLSMLDSG 181
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ + Y+G S NID AGG++ +A + + F S+ Y+ GD+
Sbjct: 182 DEMLSPAMAYLGLDPLSENIDDLEAGGEL-----IAGVRDNMTYFHSSRYVSDLANGDIC 236
Query: 207 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
V+ G+S D+ A +R ++ +PK GA+LW D+ A+PA
Sbjct: 237 VSAGYSGDIFQAAERAEEAGRDFSIGYSIPKEGAALWFDMMAVPA 281
>gi|374703156|ref|ZP_09710026.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 365
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 44/260 (16%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +++L I+ + + ++ +W K L + L ND G ++A P
Sbjct: 77 DIVVPSNNFLGKQIRAGAFQKLDRSQLTNW-KNLDPRLMKQLETNDPG------NMYAVP 129
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W L+ PE +S ++S E+I +VL Y
Sbjct: 130 YLWGTNGIGYNVEKVKEVLGVDHIDSWAVLFEPENMKNLTTCGVSFLDSADEMIPAVLNY 189
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
MG NS N D ++ L + F S+ ++ G++ VA G+S DVL
Sbjct: 190 MGLDPNSKNPD-----DYKKAEEKLLAVRPYVTYFHSSKFISDLANGNICVAAGFSGDVL 244
Query: 217 PAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
A R ++A +PK G +LW D+ AIPA S+ KQ H +I
Sbjct: 245 QAADRAEEAGKGIDIAYAIPKEGGNLWFDMMAIPADSK-NVKQ-----------AHAFIN 292
Query: 271 FCLQTARALPFKQEVIPGAS 290
+ LQ EVI G S
Sbjct: 293 YLLQP--------EVIAGVS 304
>gi|374308426|ref|YP_005054857.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Filifactor alocis ATCC 35896]
gi|291166751|gb|EFE28797.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Filifactor alocis
ATCC 35896]
Length = 354
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP GK ++ PY WG++ I Y K+K + P++ W LW + G I M++S R+ I
Sbjct: 128 DPNGK-YSVPYLWGSLGILYNKTKVTE----PVDSWNILWNEKYKGDIVMLDSSRDTIAV 182
Query: 153 VLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
L +G S N+ N +LQ A ++ Q+ L R ++ +Y + G++ + V W
Sbjct: 183 ALLKLGYSINTQNEEELQKAKEELIKQKPLV------RSYEVDNYKNSMASGELAMVVTW 236
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 252
+ D + + ++ +PK G +LW D AIP S+ +T+
Sbjct: 237 AGDAMNLMAENEDLEYALPKEGTNLWFDAIAIPVTSKHKTE 277
>gi|398952723|ref|ZP_10674961.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398154781|gb|EJM43245.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 362
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K + + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKAVLGIDKIDSWAVL 156
Query: 132 WRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLA 185
+ PE A +SM++S EV ++L YMG S N D + A K L +
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAK------LLQIR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW D
Sbjct: 211 PYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|228957658|ref|ZP_04119405.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|423629753|ref|ZP_17605501.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
gi|228802000|gb|EEM48870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|401266887|gb|EJR72956.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
Length = 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +++ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228990391|ref|ZP_04150356.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
gi|228996492|ref|ZP_04156131.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|229004143|ref|ZP_04161944.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228757004|gb|EEM06248.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228763124|gb|EEM12032.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|228768917|gb|EEM17515.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
Length = 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D ++ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 VGLKKNGFS-NSTQNDAELKTAAADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229143992|ref|ZP_04272408.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296501969|ref|YP_003663669.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|423643567|ref|ZP_17619185.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|423654168|ref|ZP_17629467.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
gi|228639389|gb|EEK95803.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296323021|gb|ADH05949.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|401274147|gb|EJR80125.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|401296635|gb|EJS02252.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
Length = 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +++ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKDDAQLKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|30019440|ref|NP_831071.1| spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206968033|ref|ZP_03228989.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218231222|ref|YP_002366071.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus B4264]
gi|228951768|ref|ZP_04113867.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229043127|ref|ZP_04190854.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|229068938|ref|ZP_04202232.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|229078572|ref|ZP_04211130.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|229108843|ref|ZP_04238448.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|229126703|ref|ZP_04255715.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|229149588|ref|ZP_04277820.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|229177795|ref|ZP_04305168.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|229189469|ref|ZP_04316486.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|365162078|ref|ZP_09358213.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423423468|ref|ZP_17400499.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|423434878|ref|ZP_17411859.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|423505017|ref|ZP_17481608.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|423647316|ref|ZP_17622886.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|449088176|ref|YP_007420617.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|29894984|gb|AAP08272.1| Spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206736953|gb|EDZ54100.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218159179|gb|ACK59171.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
B4264]
gi|228594060|gb|EEK51862.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|228605586|gb|EEK63034.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|228633934|gb|EEK90531.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|228656643|gb|EEL12469.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|228674612|gb|EEL29851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|228704716|gb|EEL57144.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|228714222|gb|EEL66103.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|228726219|gb|EEL77449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|228807890|gb|EEM54410.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|363619395|gb|EHL70714.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401115158|gb|EJQ23011.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|401125116|gb|EJQ32876.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|401286134|gb|EJR91967.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|402454883|gb|EJV86671.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|449021933|gb|AGE77096.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +++ L LLA FD+ + + F D W+
Sbjct: 175 VGLKKHGFS-NSTKDDAQLKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423524813|ref|ZP_17501286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
gi|401169039|gb|EJQ76286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
Length = 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---VPTS-WADLWNDKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423414921|ref|ZP_17392041.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|423429297|ref|ZP_17406301.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
gi|401097841|gb|EJQ05863.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|401121603|gb|EJQ29392.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
Length = 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +++ L LLA FD+ + + F D W+
Sbjct: 175 VGLKKHGFS-NSTKDDAQLKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423408761|ref|ZP_17385910.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
gi|401657031|gb|EJS74543.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
Length = 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W+DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WEDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D ++ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAELKTAANDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423397904|ref|ZP_17375105.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
gi|401649212|gb|EJS66798.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
Length = 349
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ P W+DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WEDLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D ++ +Q+ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKNGFS-NSTKEDAELKTAANDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|320353641|ref|YP_004194980.1| family 1 extracellular solute-binding protein [Desulfobulbus
propionicus DSM 2032]
gi|320122143|gb|ADW17689.1| extracellular solute-binding protein family 1 [Desulfobulbus
propionicus DSM 2032]
Length = 350
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 115/263 (43%), Gaps = 43/263 (16%)
Query: 92 IDPR--------GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
IDPR G ++ PY WG+ +A + DLW+PEL G++ +
Sbjct: 112 IDPRFTNQSFDPGNGYSVPYMWGSTSLAVNTQVIGGDT---VRKMADLWKPELKGKLLLP 168
Query: 144 NSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
N PREV+G LK +G S N + + L+ A + L L Q R+FDS +A
Sbjct: 169 NDPREVMGIGLKVLGYSINEKDPEHLRQA------FERLQSLMPQVRVFDSDSPKQALLS 222
Query: 203 GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASRLETKQIGGRVRGP 261
G+V + W+ + A + + P G SLW D + IP A+ +E
Sbjct: 223 GEVAAGLVWNGEAYVANNENKAIHYLYPPEGFSLWVDSFCIPKGAAHVEAA--------- 273
Query: 262 SPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVP 321
H++I++ L+ + Q + +SP+A LP E+ N IV P
Sbjct: 274 ----HRFIDYVLRPQVSAIISQS-MGYSSPNA--KVFDFLPAEM-------KNNPIVN-P 318
Query: 322 PAEILARCEFLEPLSEATLSDYE 344
E AR EFL+ L E TL YE
Sbjct: 319 SVEDAARGEFLDSLDEQTLKIYE 341
>gi|398921988|ref|ZP_10660067.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398163704|gb|EJM51855.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 362
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLA 185
+ PE A +SM++S EV S+L YMG S N D + A + L +
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPSILNYMGMDPRSENPEDFKKAEAR------LLAIR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW D
Sbjct: 211 PYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFD 270
Query: 240 LWAIPA 245
L A+PA
Sbjct: 271 LLAVPA 276
>gi|402814635|ref|ZP_10864229.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
gi|402508482|gb|EJW19003.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
Length = 348
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 23/219 (10%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
K+KA A Y DL+ D ++ IK+ L+EP+ + + F+ ++ ++K
Sbjct: 70 KLKAGGANY---DLIQPSDYMVASMIKQDLLEPLDLNQIPN-FQYVTDRFK-------NP 118
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
E DP G ++ Y WG IAY +K+ K AP DW DLW+ E G++ +++ RE+I
Sbjct: 119 EFDP-GNKYSIVYTWGVTGIAYN-TKYVKQ--APT-DWADLWKDEYKGKVLLLDDNREII 173
Query: 151 GSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G LK G S +S N D+ A +L L FD+ + + + W+
Sbjct: 174 GMALKKAGKSNSSENEADINAA------VDDLRKLVPNVLAFDTDNIKQKMIAEEGWIGT 227
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D +VA ++PK+G+++++D +AIP S+
Sbjct: 228 VWSGDASVIHGENPDVAFMIPKTGSTIFSDNYAIPKGSK 266
>gi|398925198|ref|ZP_10661743.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398172395|gb|EJM60261.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 362
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPGNSH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLA 185
+ PE A +SM++S EV ++L YMG S N D + A K L +
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAK------LLAIR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW D
Sbjct: 211 PYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFD 270
Query: 240 LWAIPA 245
L A+PA
Sbjct: 271 LLAVPA 276
>gi|374336217|ref|YP_005092904.1| putrescine ABC transporter periplasmic-binding protein [Oceanimonas
sp. GK1]
gi|372985904|gb|AEY02154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Oceanimonas sp. GK1]
Length = 368
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 90 GEIDPR----------GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELA 137
G +DPR G + PY WGT I Y K ++ AP++ W + +PE
Sbjct: 108 GNLDPRIMTLLAEKDPGNQYGVPYLWGTTGIGYNVDKVKEVLGEDAPVDSWDLVMKPENL 167
Query: 138 GRIS-----MVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLF 191
++S +++P E+ + L Y G NS N D ++ +Q L F
Sbjct: 168 AKLSQCGVAFLDAPTEIFAAALNYQGLDPNSTNASDYNGPATELMMQ-----LRPHITYF 222
Query: 192 DSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPA 245
S+ Y+ GD+ VAVGWS D+L A +R VA +PK GA +W D+ IP
Sbjct: 223 HSSKYINDLANGDICVAVGWSGDILQARDRADEAERGVKVAYRIPKEGALMWVDMLTIPK 282
Query: 246 ASR 248
+R
Sbjct: 283 DAR 285
>gi|359786979|ref|ZP_09290052.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
gi|359295745|gb|EHK60007.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
Length = 367
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 112/254 (44%), Gaps = 45/254 (17%)
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-------MVNS 145
+G ++ PY WGT + Y + + + AP++ W L+ PE+ +++ M++S
Sbjct: 121 QGSEYSVPYMWGTNGLGYNVDRVTEILGDDAPLDSWALLFDPEITTQLNDAGCGLAMLDS 180
Query: 146 PREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
E++ + Y+G S S NI DL+ AG I A + F S+ Y+ GD
Sbjct: 181 GDEMLSPAMAYLGLSPLSENIEDLEAAGELI------AAIRGNITYFHSSRYVSDLANGD 234
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGR 257
+ VA G+S D+ A R + +PK GA+LW D+ AIPA A E
Sbjct: 235 ICVAAGYSGDIFQAADRAEEAGRDFTIGYSIPKEGAALWFDMMAIPADAPNTENA----- 289
Query: 258 VRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKG---KPSQDT 314
H +I F L+ A E + A+P+A V EELL P D
Sbjct: 290 --------HAFINFILEPEIAAEIS-EYVRYANPNAAANEFVS--EELLNDPAVYPETDV 338
Query: 315 --NLIVGVP-PAEI 325
NL V V P E+
Sbjct: 339 LQNLYVAVEKPQEV 352
>gi|227825012|ref|ZP_03989844.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|352683976|ref|YP_004895960.1| hypothetical protein Acin_0580 [Acidaminococcus intestini RyC-MR95]
gi|226905511|gb|EEH91429.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|350278630|gb|AEQ21820.1| conserved hypothetical protein [Acidaminococcus intestini RyC-MR95]
Length = 353
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
L++N DP G+ ++ Y WG I Y K + AP W+DLW P GR+ ++
Sbjct: 120 LKKN---TFDPNGE-YSVVYTWGMTGIIYNKKYVK---TAPTS-WQDLWNPVYKGRVILL 171
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ-QNLALLANQARLFDSTHYLKAFGI 202
N REVIG LK G S N+ + G+I + ++L LA +D+ + F
Sbjct: 172 NDSREVIGMALKKHGFSNNATD------PGQIDIAFKDLKTLAPNVLAYDTDSIKQKFIA 225
Query: 203 GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ W+ + WS D +V V+PK G ++WAD AIP ++
Sbjct: 226 EEAWIGMMWSGDAHFVHNDNPDVGFVIPKEGTTVWADTLAIPKGAK 271
>gi|419299149|ref|ZP_13841162.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|419873077|ref|ZP_14395081.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
gi|378155103|gb|EHX16163.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|388332378|gb|EIK99049.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
Length = 295
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQI 254
A R NV+ +PK GA + D++A+PA ++ +TK I
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKKKTKPI 293
>gi|398865909|ref|ZP_10621415.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398242096|gb|EJN27723.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 362
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPG------NEHSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQQNLALL 184
+ PE + +SM++S EV +VL YMG S N D + A K+ S++ +
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAKLLSIRPYITY- 215
Query: 185 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 238
F S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW
Sbjct: 216 ------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEARNGVNIAYAIPKEGSNLWF 269
Query: 239 DLWAIPA 245
DL AIPA
Sbjct: 270 DLLAIPA 276
>gi|417322038|ref|ZP_12108572.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
gi|328470192|gb|EGF41103.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
Length = 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP+ ++ PY WG I+Y +S + P+ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAV 209
LK G S N+ + + ++Q +L L N L++S + G+ V +
Sbjct: 172 ALKKNGHSVNTKD--------EAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGM 223
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
W+ + M + V+P+ GA LW D + IP+ S+ L H++I
Sbjct: 224 QWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFI 271
Query: 270 EFCLQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
F Q+ + E++ SA KLPEEL + P +E + +
Sbjct: 272 NFMYQSEN----QAEIVTSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKK 319
Query: 329 CEFLEPLSEATLSDYE 344
EF+ + TL+ YE
Sbjct: 320 GEFINDVGAETLAIYE 335
>gi|238751802|ref|ZP_04613289.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
gi|238709931|gb|EEQ02162.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
Length = 369
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISM 142
G+ DP K +A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 120 GKHDPENK-FAVPYLWATTGIGYNVEKVKAALGTDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
+++P E+ +VL Y+G NS +Q + L L R F S+ Y+
Sbjct: 179 LDAPSEIFATVLNYLGKDPNS----IQATDYTGPATELLLKLRPNIRYFHSSQYINDLAN 234
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD+ VAVGW+ D+L A R NVA +PK GA + D++A+PA ++
Sbjct: 235 GDICVAVGWAGDILQASNRAKEANNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|91224115|ref|ZP_01259378.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|433659509|ref|YP_007300368.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
gi|91191026|gb|EAS77292.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|432510896|gb|AGB11713.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
Length = 344
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP+ ++ PY WG I+Y +S + P+ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAV 209
LK G S N+ + + ++Q +L L N L++S + G+ V +
Sbjct: 172 ALKKNGHSVNTKD--------EAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGM 223
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
W+ + M + V+P+ GA LW D + IP+ S+ L H++I
Sbjct: 224 QWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFI 271
Query: 270 EFCLQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
F Q+ + E++ SA KLPEEL + P +E + +
Sbjct: 272 NFMYQSEN----QAEIVTSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKK 319
Query: 329 CEFLEPLSEATLSDYE 344
EF+ + TL+ YE
Sbjct: 320 GEFINDVGAETLAIYE 335
>gi|238794852|ref|ZP_04638452.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
gi|238725795|gb|EEQ17349.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
Length = 369
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 25/224 (11%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
G+ DP K +A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 120 GKHDPENK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
+++P E+ +VL Y+G NS LQ + L L R F S+ Y+
Sbjct: 179 LDAPAEIFATVLNYLGKDPNS----LQATDYTGPATELLLKLRPNIRYFHSSQYINDLAN 234
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQI 254
GD+ VAVGW+ D++ A R NVA +PK GA + D++A+P A ++ E Q
Sbjct: 235 GDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAKNQDEAYQF 294
Query: 255 GGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 293
+ P + I + + A P E + PG P A
Sbjct: 295 LNYLMRPDVIANISNHVFYANANKAATPLVNEAVRDNPGIYPPA 338
>gi|153837449|ref|ZP_01990116.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
gi|149749249|gb|EDM60034.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
Length = 344
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP+ ++ PY WG I+Y +S + P+ W DLW + ++ +++ R+V G
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAV 209
LK G S N+ + + ++Q +L L N L++S + G+ V +
Sbjct: 172 ALKKNGHSVNTKD--------EAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGM 223
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
W+ + M + V+P+ GA LW D + IP+ S+ L H++I
Sbjct: 224 QWNGNAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFI 271
Query: 270 EFCLQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
F Q+ + E++ SA KLPEEL + P +E + +
Sbjct: 272 NFMYQSEN----QAEIVTSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKK 319
Query: 329 CEFLEPLSEATLSDYE 344
EF+ + TL+ YE
Sbjct: 320 GEFINDVGAETLAIYE 335
>gi|270261134|ref|ZP_06189407.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|421782671|ref|ZP_16219125.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
gi|270044618|gb|EFA17709.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|407755080|gb|EKF65209.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
Length = 369
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 132/319 (41%), Gaps = 66/319 (20%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAE-------DQDWFKCLSHKWKVY 83
K+ A S Y DLV ++L K + EP+ ++ D D K ++H
Sbjct: 70 KLMAGSTGY---DLVVPSSNFLERQSKAGIFEPLDKSKMPNYKNLDPDMLKLVAH----- 121
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-- 139
ND + + PY T I Y K + AP++ W + +PE +
Sbjct: 122 ---ND------KDNKYGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLK 172
Query: 140 ---ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTH 195
+S +++P EV +VL Y+G NS N A +L L L R F S+
Sbjct: 173 SCGVSFLDAPSEVYATVLHYLGKDPNSTN-----AADYTGAANDLLLKLRPNIRYFHSSQ 227
Query: 196 YLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRL 249
Y+ GD+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 228 YINDLANGDICVAIGWSGDVMQAANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAKN 287
Query: 250 ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK 309
+ +Q++ F L K +V+ G S VK L+
Sbjct: 288 KDAA------------YQFLNFLL--------KPDVMAGISNFVYYANAVKDSTPLVNAD 327
Query: 310 PSQDTNLIVGVPPAEILAR 328
+ N+ PPA++ A+
Sbjct: 328 IRNNPNVY---PPADLSAK 343
>gi|339492154|ref|YP_004712447.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799526|gb|AEJ03358.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 361
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 113/259 (43%), Gaps = 50/259 (19%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 139
L++ND G AAPY WGT I Y K + ++ I+ W L+ PE A +
Sbjct: 113 LQKNDPG------NAHAAPYLWGTNGIGYNVEKVKAALSVDKIDSWSVLFEPENAQKLAS 166
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHY 196
I+ ++S E+I ++L Y+G NS N D Q A ++ L + R F S+ Y
Sbjct: 167 CGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKA------EEKLLAVRPHVRYFHSSKY 220
Query: 197 LKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRL 249
+ G++ VA G+S DV A R +A +PK G +LW D+ AIPA AS +
Sbjct: 221 ISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADASNV 280
Query: 250 ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK 309
E H +I + L + EVI S EL+ +
Sbjct: 281 EEA-------------HAFINYLL--------RPEVIAAVSDYVGYANPNLKASELMDQE 319
Query: 310 PSQDTNLIVGVPPAEILAR 328
+D ++ PP E+L R
Sbjct: 320 VREDASV---YPPQEVLDR 335
>gi|407364788|ref|ZP_11111320.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 362
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 27/187 (14%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W+ L
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWEVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQQNLALL 184
+ PE + +SM++S EV ++L YMG S N D + A K+ S++ +
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAKLLSIRPYITY- 215
Query: 185 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 238
F S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW
Sbjct: 216 ------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWF 269
Query: 239 DLWAIPA 245
DL AIPA
Sbjct: 270 DLLAIPA 276
>gi|398984257|ref|ZP_10690526.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399011979|ref|ZP_10714307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398116585|gb|EJM06344.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398155956|gb|EJM44383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 362
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 89/187 (47%), Gaps = 27/187 (14%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L++ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLELLQKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQQNLALL 184
+ PE + +SM++S EV +VL YMG S N D + A K+ S++ +
Sbjct: 157 FEPENLKKLTQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDYKKAEAKLLSIRPYITY- 215
Query: 185 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 238
F S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW
Sbjct: 216 ------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWF 269
Query: 239 DLWAIPA 245
DL AIPA
Sbjct: 270 DLLAIPA 276
>gi|398895172|ref|ZP_10647050.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398181368|gb|EJM68937.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 362
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
F L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FTNLDPKLLTLLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLA 185
+ PE A +SM++S EV ++L YMG S N D + A K L +
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAK------LLQIR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW D
Sbjct: 211 PYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|333926484|ref|YP_004500063.1| family 1 extracellular solute-binding protein [Serratia sp. AS12]
gi|333931437|ref|YP_004505015.1| ABC transporter substrate-binding protein [Serratia plymuthica AS9]
gi|386328307|ref|YP_006024477.1| extracellular solute-binding protein [Serratia sp. AS13]
gi|333473044|gb|AEF44754.1| extracellular solute-binding protein family 1 [Serratia plymuthica
AS9]
gi|333490544|gb|AEF49706.1| extracellular solute-binding protein family 1 [Serratia sp. AS12]
gi|333960640|gb|AEG27413.1| extracellular solute-binding protein family 1 [Serratia sp. AS13]
Length = 369
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 132/319 (41%), Gaps = 66/319 (20%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAE-------DQDWFKCLSHKWKVY 83
K+ A S Y DLV ++L K + EP+ ++ D D K ++H
Sbjct: 70 KLMAGSTGY---DLVVPSSNFLERQSKAGIFEPLDKSKMPNYKNLDPDMLKLVAH----- 121
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-- 139
ND + + PY T I Y K + AP++ W + +PE +
Sbjct: 122 ---ND------KDNKYGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLK 172
Query: 140 ---ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTH 195
+S +++P EV +VL Y+G NS N A +L L L R F S+
Sbjct: 173 SCGVSFLDAPSEVYATVLHYLGKDPNSTN-----AADYTGAANDLLLKLRPNIRYFHSSQ 227
Query: 196 YLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRL 249
Y+ GD+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 228 YINDLANGDICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAKN 287
Query: 250 ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK 309
+ +Q++ F L K +V+ G S VK L+
Sbjct: 288 KDAA------------YQFLNFLL--------KPDVMAGISNFVYYANAVKDSTPLVNAD 327
Query: 310 PSQDTNLIVGVPPAEILAR 328
+ N+ PPA++ A+
Sbjct: 328 IRNNPNVY---PPADLRAK 343
>gi|146280465|ref|YP_001170618.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|386018710|ref|YP_005936734.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|145568670|gb|ABP77776.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|327478682|gb|AEA81992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
Length = 361
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 112/259 (43%), Gaps = 50/259 (19%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 139
L++ND G AAPY WGT I Y K + + I+ W L+ PE A +
Sbjct: 113 LQKNDPG------NAHAAPYLWGTNGIGYNVEKVKAALGVDKIDSWSVLFEPENAQKLAS 166
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHY 196
I+ ++S E+I ++L Y+G NS N D Q A ++ L + R F S+ Y
Sbjct: 167 CGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKA------EEKLLAVRPHVRYFHSSKY 220
Query: 197 LKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRL 249
+ G++ VA G+S DV A R +A +PK G +LW D+ AIPA AS +
Sbjct: 221 ISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADASNV 280
Query: 250 ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK 309
E H +I + L + EVI S EL+ +
Sbjct: 281 EEA-------------HAFINYLL--------RPEVIAAVSDYVGYANPNLKASELMDQE 319
Query: 310 PSQDTNLIVGVPPAEILAR 328
+D ++ PP E+L R
Sbjct: 320 VREDASV---YPPQEVLDR 335
>gi|406671762|ref|ZP_11079001.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
gi|405581012|gb|EKB55071.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
Length = 357
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DL+ + + I+ L+E I A+ L + + +L ++ DP G ++ P
Sbjct: 85 DLIGPSEYMVETMIELGLLETIDAAQ----LDNLQYIDEHFLDQS----FDP-GNHYSIP 135
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y WGT+ I Y SKF I+ W DLW+PEL G++ M++ REV+G L+ G S N
Sbjct: 136 YFWGTLGIVYN-SKFIDE--GDIQSWDDLWKPELRGKVMMIDGAREVLGIGLQSQGWSLN 192
Query: 163 -SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 219
+++ LQ + K+ ++ N+ ALLA++ +++ + + +AV +S + A+
Sbjct: 193 ETDSQRLQKSADKMKTLMPNIQALLADEIKMY--------LAMEESPIAVTYSGEAAMAM 244
Query: 220 KRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ N+ +VP+ G+++W D AIP ++
Sbjct: 245 EENENLCYLVPQEGSNIWFDNLAIPKGAK 273
>gi|398873539|ref|ZP_10628794.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398199204|gb|EJM86149.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 362
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K + + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPGNSH------SVPYLWGTNGIGYNVDKVKAVLGIDKIDSWAVL 156
Query: 132 WRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLA 185
+ PE A +SM++S EV ++L YMG S N D + A K L +
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAMLNYMGMDPRSENPEDFKKAEAK------LLQIR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW D
Sbjct: 211 PYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|398854217|ref|ZP_10610791.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398236715|gb|EJN22488.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 362
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 89/187 (47%), Gaps = 27/187 (14%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L++ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLELLQKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQQNLALL 184
+ PE + +SM++S EV +VL YMG S N D + A K+ S++ +
Sbjct: 157 FEPENLKKLTQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDYKKAEAKLLSIRPYITY- 215
Query: 185 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 238
F S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW
Sbjct: 216 ------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWF 269
Query: 239 DLWAIPA 245
DL AIPA
Sbjct: 270 DLLAIPA 276
>gi|448747704|ref|ZP_21729359.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
gi|445564647|gb|ELY20764.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
Length = 369
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 96 GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-------MVNSP 146
G ++ PY WGT I Y + ++ + AP++ W L+ PE+ +S M++S
Sbjct: 124 GSEYSVPYMWGTNGIGYNVDRVKEILGDDAPVDSWALLFDPEITSALSEAGCGLSMLDSA 183
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ + Y+G S N+D A G++ +A + + F S+ Y+ GD+
Sbjct: 184 DEMLSPAMAYLGFDPLSENLDDIEAAGEL-----IAEVRDDMTYFHSSRYVSDLANGDIC 238
Query: 207 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
VA G+S D+ A R +A +PK GA+LW D+ A+PA
Sbjct: 239 VAAGYSGDIFQAADRAEEAGRDFTIAYSIPKEGAALWFDMMAVPA 283
>gi|27378917|ref|NP_770446.1| substrate-binding protein [Bradyrhizobium japonicum USDA 110]
gi|27352067|dbj|BAC49071.1| blr3806 [Bradyrhizobium japonicum USDA 110]
Length = 374
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP---I 125
D+ LSH W V +R G DP G ++AA Y WGT I Y +K K L P I
Sbjct: 107 DKSRLPNLSHAWPVVTQR--LGIYDP-GNVYAANYMWGTTGIGYNVAKV-KQILGPDAKI 162
Query: 126 EDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQ 179
+ W +++PE + + M++S ++ + L Y+G NS DL+ A +
Sbjct: 163 DSWDIVFKPENLAKFKDCGVHMLDSADDIFPAALSYLGLDPNSTKQADLEKAADAV---- 218
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 233
A + R F S+ YL A G++ VGWS D++ A R + + +PK G
Sbjct: 219 --AKVRPSVRKFHSSEYLSALATGEICFVVGWSGDIMQARARAAEAKSGVEIGYTIPKEG 276
Query: 234 ASLWADLWAIPAASR 248
A ++ D AIPA ++
Sbjct: 277 AQMFFDNLAIPADAK 291
>gi|443472342|ref|ZP_21062371.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442902684|gb|ELS28200.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 364
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + +L IK + + ++ +W + L K L RNDAG +A P
Sbjct: 76 DLVVPSNHFLGKQIKAGAFQKLDRSQLPNW-ENLDPKLLKQLERNDAG------NQYAVP 128
Query: 103 YRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W ++ PE ++S ++S E+I +VL Y
Sbjct: 129 YLWGTNGIGYNVEKVKAALGVDHIDSWAAIFEPENMKKLSQCGVAFLDSADEMIPAVLNY 188
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
MG NS N D + L + F S+ Y+ GD+ VA G+S D+
Sbjct: 189 MGLDPNSTNPD-----DYKKAEAKLMAVRPYVTYFHSSKYIGDLANGDICVAAGFSGDIF 243
Query: 217 PAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
A R +A +PK G +LW D+ A+PA
Sbjct: 244 QAASRAEEAGKGIEIAYAIPKEGGNLWFDMLAVPA 278
>gi|157961031|ref|YP_001501065.1| extracellular solute-binding protein [Shewanella pealeana ATCC
700345]
gi|157846031|gb|ABV86530.1| extracellular solute-binding protein family 1 [Shewanella pealeana
ATCC 700345]
Length = 361
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L IK + +P+ D+ K H L + + D + +A P
Sbjct: 73 DLVVSSGSFLQRQIKVGVFQPL----DKSRLKNYYHLDPKVLNIVQSFDEDNQ---YAVP 125
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + P+ W+ L++ E + S MV++P EV+ ++LKY
Sbjct: 126 YMWGTTGIGYNIDKAAQILGEQPLNTWELLFQAETVSKFSECGVAMVDAPSEVVSAMLKY 185
Query: 157 MGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G + NS N+ DL++ V++ L + F S+ Y+ G++ +A+GWS DV
Sbjct: 186 LGKNPNSQNLDDLKL------VEERLLAIRPYITYFHSSSYVTDLASGNICLAMGWSGDV 239
Query: 216 LPAVKRM------SNVAVVVPKSGASLWADLWAIPAASR 248
A R NV V+PK GA WAD + I S+
Sbjct: 240 FMAANRALEANNGVNVDYVIPKEGAQGWADTFNITNDSK 278
>gi|75760662|ref|ZP_00740689.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218896320|ref|YP_002444731.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus G9842]
gi|228899966|ref|ZP_04064205.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|228964344|ref|ZP_04125462.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|402561620|ref|YP_006604344.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|423361349|ref|ZP_17338851.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|423564315|ref|ZP_17540591.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|434374327|ref|YP_006608971.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
gi|74491843|gb|EAO55032.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218543320|gb|ACK95714.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
G9842]
gi|228795353|gb|EEM42842.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228859677|gb|EEN04098.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|401079797|gb|EJP88091.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|401197346|gb|EJR04279.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|401790272|gb|AFQ16311.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|401872884|gb|AFQ25051.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
Length = 349
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D ++ +++ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKEDAELKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228907017|ref|ZP_04070883.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
gi|228852631|gb|EEM97419.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
Length = 349
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D ++ +++ L LLA FD+ + + F D W+
Sbjct: 175 MGLKKHGFS-NSTKEDAELKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423588228|ref|ZP_17564315.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
gi|401226736|gb|EJR33270.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
Length = 349
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D Q+ +++ L LLA FD+ + + F D W+
Sbjct: 175 VGLKKHGFS-NSTKDDAQLKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++W D AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWTDTLAIPKGAK 266
>gi|228938503|ref|ZP_04101112.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228971382|ref|ZP_04132008.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228977994|ref|ZP_04138374.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|384185302|ref|YP_005571198.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|410673593|ref|YP_006925964.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|423382787|ref|ZP_17360043.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|423530753|ref|ZP_17507198.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|452197614|ref|YP_007477695.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228781782|gb|EEM29980.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|228788249|gb|EEM36202.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228821240|gb|EEM67256.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|326939011|gb|AEA14907.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|401643647|gb|EJS61341.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|402446087|gb|EJV77951.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|409172722|gb|AFV17027.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|452103007|gb|AGF99946.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 349
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ Y WG IAY K ++ AP W DLW + G ++++N REV+G
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK G S NS D ++ +++ L LLA FD+ + + F D W+
Sbjct: 175 VGLKKHGFS-NSTKEDAELKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D K +V VVPK G ++WAD AIP ++
Sbjct: 229 WSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|296390225|ref|ZP_06879700.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PAb1]
gi|416874544|ref|ZP_11918188.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
gi|334843128|gb|EGM21722.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
Length = 363
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 48/306 (15%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV AG+ DP G + P
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVL-----AGK-DP-GNRYVMP 126
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K R + AP++ W +++PE + ++ ++SP EVI VL
Sbjct: 127 YMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLH 186
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS+ + +++LA L F S+ ++ G+V VA+ WS
Sbjct: 187 YLGLSPNSHQSE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGA 241
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
+ A R + +PK GA+ W D+ AIP ++ +Q H ++
Sbjct: 242 MQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK-NVEQ-----------AHAFL 289
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
++ L+ P + + A+P+ K + L+ + + N+ PP E+ AR
Sbjct: 290 DYLLRPEVVAPI-SDYVAYANPN-------KAADGLISAELRDNPNVY---PPEEVQARL 338
Query: 330 EFLEPL 335
+E L
Sbjct: 339 YSVEML 344
>gi|152984615|ref|YP_001349283.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PA7]
gi|150959773|gb|ABR81798.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PA7]
Length = 363
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 48/306 (15%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV AG+ DP G + P
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVL-----AGK-DP-GNRYVMP 126
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K R + AP++ W +++PE + ++ ++SP EVI VL
Sbjct: 127 YMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLH 186
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS+ + +++LA L F S+ ++ G+V VA+ WS
Sbjct: 187 YLGLSPNSHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGA 241
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
+ A R + +PK GA+ W D+ AIP ++ +Q H ++
Sbjct: 242 MQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK-NVEQ-----------AHAFL 289
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
++ L+ P + + A+P+ K + L+ + + N+ PP E+ AR
Sbjct: 290 DYLLRPEVVAPI-SDYVAYANPN-------KAADGLISAELRDNPNVY---PPEEVQARL 338
Query: 330 EFLEPL 335
+E L
Sbjct: 339 YTVEML 344
>gi|49086268|gb|AAT51340.1| PA1410, partial [synthetic construct]
Length = 364
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 48/306 (15%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV AG+ DP G + P
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVL-----AGK-DP-GNRYVMP 126
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K R + AP++ W +++PE + ++ ++SP EVI VL
Sbjct: 127 YMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLH 186
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS+ + +++LA L F S+ ++ G+V VA+ WS
Sbjct: 187 YLGLSPNSHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGA 241
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
+ A R + +PK GA+ W D+ AIP ++ +Q H ++
Sbjct: 242 MQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK-NVEQ-----------AHAFL 289
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
++ L+ P + + A+P+ K + L+ + + N+ PP E+ AR
Sbjct: 290 DYLLRPEVVTPI-SDYVAYANPN-------KAADGLISAELRDNPNVY---PPEEVQARL 338
Query: 330 EFLEPL 335
+E L
Sbjct: 339 YSVEML 344
>gi|149377228|ref|ZP_01894976.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
gi|149358527|gb|EDM47001.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
Length = 368
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 25/178 (14%)
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS--- 141
+D ++DP G ++ PY WGT Y + + + + AP + W ++ PE+ G++S
Sbjct: 115 DDLEKVDP-GSQFSLPYLWGTNGYGYNEGRIQDILGDSAPTDSWALVFDPEVTGKLSAGG 173
Query: 142 ----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI--SVQQNLALLANQARLFDSTH 195
M++S E++ + + Y+G + NSNN + GG++ + + N+ F S+
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLNPNSNNAEDIKKGGEVIKATRPNITY-------FHSSR 226
Query: 196 YLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 247
Y+ GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 227 YIADLANGDLCVAAGYSGDILQAAARAEEAGNGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|116049356|ref|YP_791841.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa UCBPP-PA14]
gi|355645149|ref|ZP_09054039.1| hypothetical protein HMPREF1030_03125 [Pseudomonas sp. 2_1_26]
gi|421175518|ref|ZP_15633196.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CI27]
gi|115584577|gb|ABJ10592.1| putative periplasmic putrescine-binding permease protein
[Pseudomonas aeruginosa UCBPP-PA14]
gi|354828919|gb|EHF13017.1| hypothetical protein HMPREF1030_03125 [Pseudomonas sp. 2_1_26]
gi|404532111|gb|EKA42030.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CI27]
Length = 363
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV AG+ DP G + P
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVL-----AGK-DP-GNRYVMP 126
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K R + AP++ W +++PE + ++ ++SP EVI VL
Sbjct: 127 YMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLH 186
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS+ + +++LA L F S+ ++ G+V VA+ WS
Sbjct: 187 YLGLSPNSHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGA 241
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
+ A R + +PK GA+ W D+ AIP
Sbjct: 242 MQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|451984912|ref|ZP_21933148.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
gi|451757471|emb|CCQ85671.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
Length = 363
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV AG+ DP G + P
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVL-----AGK-DP-GNRYVMP 126
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K R + AP++ W +++PE + ++ ++SP EVI VL
Sbjct: 127 YMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLH 186
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS+ + +++LA L F S+ ++ G+V VA+ WS
Sbjct: 187 YLGLSPNSHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGA 241
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
+ A R + +PK GA+ W D+ AIP
Sbjct: 242 MQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|334119180|ref|ZP_08493267.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333458651|gb|EGK87268.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 376
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 113/255 (44%), Gaps = 36/255 (14%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRIS 141
LR+ + G ++ P WGT + Y + ++ EDW+ LW + ELA R++
Sbjct: 138 LRKQFQNPVYDPGNRYSVPLSWGTTGLIYNTEQLKEEP----EDWEYLWQHKQELAKRMT 193
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
+ + REV+G+ L+ +G S NS N + QV + L L F + +
Sbjct: 194 LASDVREVMGAALRMLGYSLNSTNQE-QVK----QAYEKLVELKPAIASFTTDAWRPQML 248
Query: 202 IGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGP 261
GD+ VA+ +SSD + + VVPKSG+SLW D IP S P
Sbjct: 249 TGDLKVAMCYSSDANEVISDNDKLKYVVPKSGSSLWTDTLVIPKGS-------------P 295
Query: 262 SP-LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
+P ++WI F LQ A E + ++PS E LP E+ + +
Sbjct: 296 NPEAAYKWINFMLQPDVAASLV-ERLSFSTPS--EDAFSLLPPEVREND--------ILF 344
Query: 321 PPAEILARCEFLEPL 335
P +L +CE + P+
Sbjct: 345 PSEAVLKKCEGVAPV 359
>gi|13475822|ref|NP_107392.1| ABC transporter substrate-binding protein [Mesorhizobium loti
MAFF303099]
gi|14026581|dbj|BAB53178.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti
MAFF303099]
Length = 365
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A Y WGT I Y K + I+ W L++PE A + I++V++P
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVDKVKAALGDVQIDSWDVLFKPENAAKLKDCGINIVDAP 179
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E + + Y+G +S + AGG I + + + R F+S+ Y+ GD
Sbjct: 180 EETVAVAMNYLGKDGDSKKKEDLEAGGDIYTK-----IRSYVRTFNSSSYINDLANGDKC 234
Query: 207 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+++GWS DVL A R NV ++P+ G +W D AIPA ++
Sbjct: 235 ISIGWSGDVLQAKNRAKEAKNGVNVEYLIPREGTYMWFDNLAIPADAK 282
>gi|15596607|ref|NP_250101.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PAO1]
gi|107100846|ref|ZP_01364764.1| hypothetical protein PaerPA_01001875 [Pseudomonas aeruginosa PACS2]
gi|218892717|ref|YP_002441586.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa LESB58]
gi|254234510|ref|ZP_04927833.1| hypothetical protein PACG_00369 [Pseudomonas aeruginosa C3719]
gi|254239762|ref|ZP_04933084.1| hypothetical protein PA2G_00387 [Pseudomonas aeruginosa 2192]
gi|313106401|ref|ZP_07792635.1| putative periplasmic putrescine-binding permease protein
[Pseudomonas aeruginosa 39016]
gi|386059782|ref|YP_005976304.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa M18]
gi|386065231|ref|YP_005980535.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCGM2.S1]
gi|416862774|ref|ZP_11915133.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 138244]
gi|418583265|ref|ZP_13147335.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|418593218|ref|ZP_13157070.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|420136669|ref|ZP_14644704.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CIG1]
gi|421161841|ref|ZP_15620761.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 25324]
gi|421181616|ref|ZP_15639111.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa E2]
gi|421516044|ref|ZP_15962730.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PAO579]
gi|9947357|gb|AAG04799.1|AE004570_7 probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PAO1]
gi|126166441|gb|EAZ51952.1| hypothetical protein PACG_00369 [Pseudomonas aeruginosa C3719]
gi|126193140|gb|EAZ57203.1| hypothetical protein PA2G_00387 [Pseudomonas aeruginosa 2192]
gi|218772945|emb|CAW28757.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa LESB58]
gi|310879137|gb|EFQ37731.1| putative periplasmic putrescine-binding permease protein
[Pseudomonas aeruginosa 39016]
gi|334835734|gb|EGM14589.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 138244]
gi|347306088|gb|AEO76202.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa M18]
gi|348033790|dbj|BAK89150.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCGM2.S1]
gi|375047485|gb|EHS40031.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|375047922|gb|EHS40457.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|403250570|gb|EJY63991.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CIG1]
gi|404349772|gb|EJZ76109.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PAO579]
gi|404538515|gb|EKA48046.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 25324]
gi|404543444|gb|EKA52717.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa E2]
gi|453048458|gb|EME96171.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PA21_ST175]
Length = 363
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV AG+ DP G + P
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVL-----AGK-DP-GNRYVMP 126
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K R + AP++ W +++PE + ++ ++SP EVI VL
Sbjct: 127 YMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLH 186
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS+ + +++LA L F S+ ++ G+V VA+ WS
Sbjct: 187 YLGLSPNSHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGA 241
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
+ A R + +PK GA+ W D+ AIP
Sbjct: 242 MQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|395236033|ref|ZP_10414233.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
gi|394729339|gb|EJF29335.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
Length = 370
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 99 WAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIG 151
+ PY T I Y K + AP++ W +++PE + +S +++P E+
Sbjct: 129 YGIPYMMVTTGIGYNVDKVKAVLGKDAPVDSWDLIFKPENLEKLKSCGVSFLDAPSEIYA 188
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
+VL Y+G NS N D A + L L R F S+ Y+ GD+ VA+G
Sbjct: 189 TVLHYLGKDPNSTNAADYTGAANDL-----LMKLRPNIRYFHSSQYINDLANGDICVAIG 243
Query: 211 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPS 262
WS D+L A R NVA +PK GA ++ D++A+P A ++ E Q + P
Sbjct: 244 WSGDILQAANRAKEAKNGVNVAYSIPKEGAMVYFDMFALPVDAKNKDEAYQFLNYLMKPD 303
Query: 263 PL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 293
+ I I + A P E + PG P A
Sbjct: 304 VIANISNHIYYANANKEATPLLSEEVRSNPGIYPPA 339
>gi|392985122|ref|YP_006483709.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa DK2]
gi|419752868|ref|ZP_14279273.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|424940611|ref|ZP_18356374.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCMG1179]
gi|346057057|dbj|GAA16940.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCMG1179]
gi|384400764|gb|EIE47122.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|392320627|gb|AFM66007.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa DK2]
Length = 363
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV AG+ DP G + P
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVL-----AGK-DP-GNRYVMP 126
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K R + AP++ W +++PE + ++ ++SP EVI VL
Sbjct: 127 YMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLH 186
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS+ + +++LA L F S+ ++ G+V VA+ WS
Sbjct: 187 YLGLSPNSHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGA 241
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
+ A R + +PK GA+ W D+ AIP
Sbjct: 242 MQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|238762095|ref|ZP_04623068.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
gi|238699823|gb|EEP92567.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
Length = 369
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISM 142
G+ DP K +A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 120 GKHDPDNK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
+++P E+ +VL Y+G NS +Q + L L R F S+ Y+
Sbjct: 179 LDAPSEIFATVLNYLGKDPNS----IQATDYTGPATELLLKLRPNIRYFHSSQYINDLAN 234
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD+ VAVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 235 GDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|421615517|ref|ZP_16056541.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
gi|409782590|gb|EKN62145.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
Length = 361
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 43/249 (17%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G AAPY WGT I Y K + + I+ W ++ PE A + I+ ++S
Sbjct: 117 DP-GNAHAAPYLWGTNGIGYNVEKVKAALGVDKIDSWAVIFEPENAAKLASCGIAFLDSA 175
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E+I ++L Y+G NS N A ++ L + R F S+ Y+ G++
Sbjct: 176 DEMIPAMLNYLGLDPNSEN-----AADYRKAEEKLLAVRPHVRYFHSSKYISDLANGNIC 230
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLETKQIGGRVR 259
VA G+S DV A R +A +PK G +LW D+ AIPA AS ++
Sbjct: 231 VAAGFSGDVFQAAARAEEAGKGVEIAYAIPKEGGNLWFDMLAIPADASNVDEA------- 283
Query: 260 GPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVG 319
H +I + L + EVI S EL+ + QD ++
Sbjct: 284 ------HAFINYLL--------RPEVIAAVSDYVGYANPNLKASELMDQEVRQDASV--- 326
Query: 320 VPPAEILAR 328
PP E+L R
Sbjct: 327 YPPQEVLDR 335
>gi|421169026|ref|ZP_15627073.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 700888]
gi|404527872|gb|EKA38000.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 700888]
Length = 363
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV AG+ DP G + P
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVL-----AGK-DP-GNRYVMP 126
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K R + AP++ W +++PE + ++ ++SP EVI VL
Sbjct: 127 YMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLH 186
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS+ + +++LA L F S+ ++ G+V VA+ WS
Sbjct: 187 YLGLSPNSHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGA 241
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
+ A R + +PK GA+ W D+ AIP
Sbjct: 242 MQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|399911594|ref|ZP_10779908.1| extracellular solute-binding protein [Halomonas sp. KM-1]
Length = 367
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 38/209 (18%)
Query: 96 GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-------ISMVNSP 146
G ++ PY WGT I Y + + + AP++ W L+ PE+ ISM++S
Sbjct: 122 GSRYSIPYMWGTNGIGYNVERVTEILGDDAPLDSWALLFDPEITTALRQGGCGISMLDSG 181
Query: 147 REVIGSVLKYMGAS-YNSNNIDLQVAGGKIS-VQQNLALLANQARLFDSTHYLKAFGIGD 204
E++ + Y+G S + DL+ AG I+ V+ N+ F S+ Y+ GD
Sbjct: 182 DEMLSPAMAYLGLSPLSEETADLEAAGDLIAAVRDNITY-------FHSSRYISDLANGD 234
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRV 258
+ VA G+S D+ A R + ++PK GA+LW D+ AIPA +
Sbjct: 235 ICVAAGYSGDIFQAADRAEEAGRDFTIDYIIPKEGAALWFDMMAIPADA----------- 283
Query: 259 RGPSP-LIHQWIEFCLQTARALPFKQEVI 286
P+P H +I F L+ A + V+
Sbjct: 284 --PNPDNAHAFINFILEPEVAAAITEYVV 310
>gi|123441805|ref|YP_001005789.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420259064|ref|ZP_14761782.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088766|emb|CAL11571.1| putrescine-binding periplasmic protein precursor [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404513431|gb|EKA27248.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 369
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISM 142
G+ DP K +A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 120 GKHDPDNK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
+++P E+ +VL Y+G NS +Q + L L R F S+ Y+
Sbjct: 179 LDAPSEIFATVLNYLGKDPNS----IQATDYTGPATELLLKLRPNIRYFHSSQYINDLAN 234
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD+ VAVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 235 GDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|152988127|ref|YP_001346915.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
gi|150963285|gb|ABR85310.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
Length = 353
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 84 LRRNDAGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----EL 136
L+ DAG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++
Sbjct: 100 LKNEDAGYLDKDFDKGNRYSVPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKI 158
Query: 137 AGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTH 195
GR+++++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+
Sbjct: 159 KGRVTVMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSS 212
Query: 196 YLKAFGIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 249
Y+K +G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 213 YIKELTLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDSMVIHKGS-- 270
Query: 250 ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
R P L +++I+F L A ++ G +P+A ++ PE
Sbjct: 271 ---------RNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAAQPFIR-PE 312
>gi|398882696|ref|ZP_10637662.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198363|gb|EJM85321.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 362
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQQNLALL 184
+ PE + +SM++S EV ++L YMG S N D + A K+ S++ +
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDYKKAEAKLLSIRPYITY- 215
Query: 185 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 238
F S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW
Sbjct: 216 ------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWF 269
Query: 239 DLWAIPA 245
DL AIPA
Sbjct: 270 DLLAIPA 276
>gi|315644532|ref|ZP_07897664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
gi|315280039|gb|EFU43336.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
Length = 350
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 45/312 (14%)
Query: 6 KRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIA 65
K + + ++ + D NN + K+KA + Y DL+ D + I+ L+EP+
Sbjct: 48 KDFEEKFDVKVTYDNYANNEDL-LAKIKAGGSGY---DLIQPSDYMVKTMIESELLEPLE 103
Query: 66 G------AEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK 119
D FK S+ DP G ++ Y G IAY K K
Sbjct: 104 MNNIPNFVNITDTFKDPSY--------------DP-GNKYSIVYTSGVTGIAYNK----K 144
Query: 120 HNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 179
+ + I+ W DLW PE G++ +++ RE+IG LK G S NS+ + ++ I+
Sbjct: 145 YVIDEIKSWGDLWNPEYKGKVLLLDDNREMIGMALKKQGKS-NSSKDEAEI----IAASD 199
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 239
L L FD+ + + + W+A WS D +VA VVP+ GA++++D
Sbjct: 200 ELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAAFIAAENPDVAYVVPEEGATIFSD 259
Query: 240 LWAIPAASR---LETKQIGGRVRGP-SPLIHQWIEFCLQTARALPFKQEVIPGASPSALE 295
+AIP ++ L K I + S +++I + +A+ F E
Sbjct: 260 NYAIPKGAKNKELAEKFINFMLEPEVSAKNYEFIGYSNPNTKAMEFHSEEYRA------- 312
Query: 296 TTLVKLPEELLK 307
T++ L EE L+
Sbjct: 313 NTMINLTEEELR 324
>gi|398887585|ref|ZP_10642244.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398192053|gb|EJM79222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 365
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWSMLFEPENIKKLHKCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F+S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNEEDYKKATAK------LLAVRPYVTYFNSSKYITDLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VAVG+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 234 CVAVGFSGDIFQARNRAKEAKKGINIAYAIPKEGGALWFDMLAIPKDS 281
>gi|421154900|ref|ZP_15614391.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 14886]
gi|404521287|gb|EKA31894.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 14886]
Length = 363
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 48/306 (15%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV AG+ DP G + P
Sbjct: 74 DLVVPSDSFLPNYLKAEVFQPLDKSKLLNWKNLNPALLKVL-----AGK-DP-GNRYVMP 126
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K R + AP++ W +++PE + ++ ++SP EVI VL
Sbjct: 127 YMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLH 186
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS+ + +++LA L F S+ ++ G+V VA+ WS
Sbjct: 187 YLGLSPNSHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGA 241
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
+ A R + +PK GA+ W D+ AIP ++ +Q H ++
Sbjct: 242 MQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK-NVEQ-----------AHAFL 289
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
++ L+ P + + A+P+ K + L+ + + N+ PP E+ AR
Sbjct: 290 DYLLRPEVVAPI-SDYVAYANPN-------KAADGLISAELRDNPNVY---PPEEVQARL 338
Query: 330 EFLEPL 335
+E L
Sbjct: 339 YSVEML 344
>gi|257870119|ref|ZP_05649772.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257804283|gb|EEV33105.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 357
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 38/263 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP + ++ PY WGT+ I Y F + I++W DLW+PEL I +++ REVIG
Sbjct: 126 FDPDNR-YSIPYFWGTLGIVYNDKFFAE---GEIKEWDDLWKPELKDSIMLIDGAREVIG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS ++ L A K+ + N+ A++A++ +++ + + VA
Sbjct: 182 LGLNSLGYSLNSKDDKQLTAAFNKLRKMTPNIKAIVADEIKMYMANE--------EASVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
V +S + + ++ V+P G++LW D IP S+ E + +
Sbjct: 234 VTFSGEAADMMYENEHIHYVIPSEGSNLWFDNMVIPKTSKNEEGA------------YAF 281
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
+ F L+ A E I ++P+ + L LP+E+ +QD P E++
Sbjct: 282 LNFMLEPENAAQ-NAEYIGYSTPN--KKALALLPDEI-----TQDKQF---YPSDELMKH 330
Query: 329 CEFLEPLSEATLSDYEWLVADLQ 351
E E L L Y L +L+
Sbjct: 331 LEVYENLGAQYLGIYNDLFLELK 353
>gi|238753457|ref|ZP_04614820.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
gi|238708410|gb|EEQ00765.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
Length = 369
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP+ + +A PY W T I Y K + API W + +PE + +S +++
Sbjct: 123 DPQNQ-YAIPYLWATTGIGYNVEKVKAALGTDAPINSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y G NS+N AG L L L R F S+ Y+ GD
Sbjct: 182 PSEIFATVLNYQGKDPNSSN-----AGDYTGSATELLLKLRPNIRYFHSSQYINDLANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VAVGW+ DV+ A R NVA +PK GA + D++A+P ++
Sbjct: 237 ICVAVGWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 286
>gi|357050375|ref|ZP_09111575.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
gi|355381460|gb|EHG28584.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
Length = 357
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 38/263 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP + ++ PY WGT+ I Y F + I++W DLW+PEL I +++ REVIG
Sbjct: 126 FDPDNR-YSIPYFWGTLGIVYNDKFFAE---GEIKEWDDLWKPELKDSIMLIDGAREVIG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS ++ L A K+ + N+ A++A++ +++ + + VA
Sbjct: 182 LGLNSLGYSLNSKDDKQLTAAFNKLRKMTPNIKAIVADEIKMYMANE--------EASVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
V +S + + ++ V+P G++LW D IP S+ E + +
Sbjct: 234 VTFSGEAADMMYENEHIHYVIPSEGSNLWFDNMVIPKTSKNEEGA------------YAF 281
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
+ F L+ A E I ++P+ + L LP+E+ +QD P E++
Sbjct: 282 LNFMLEPENAAQ-NAEYIGYSTPN--KKALALLPDEI-----TQDKQF---YPSDELMKH 330
Query: 329 CEFLEPLSEATLSDYEWLVADLQ 351
E E L L Y L +L+
Sbjct: 331 LEVYENLGAQYLGIYNDLFLELK 353
>gi|253575509|ref|ZP_04852846.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845156|gb|EES73167.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 335
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 6 KRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIA 65
++ + + ++ + D NN + K+KA Y DL+ D ++ IK+ L+ P+
Sbjct: 32 EQFEKEFDVKINYDVFANNEDL-LAKIKAGGGGY---DLIQPSDYMVATMIKQDLLAPLD 87
Query: 66 GAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPI 125
+ F +S +K DP G ++ Y G IAY K + I
Sbjct: 88 MNNIPN-FANVSDAYK-------NPSYDP-GNKYSIVYTSGVTGIAYNKKYVKDE----I 134
Query: 126 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLA 185
+ W+DLW PE G++ +++ REVIG LK G S +S + G + ++L L
Sbjct: 135 DSWEDLWNPEYKGKVILLDDNREVIGMALKKNGYSNSSTD-----EGEITTAVEDLKKLL 189
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 245
FD+ + + + W+A WS D + +VA VVPK G ++W+D +AIP
Sbjct: 190 PSVLAFDTDNIKQKMIQEEGWIATVWSGDASYIAQDNPDVAYVVPKEGGTIWSDNYAIPK 249
Query: 246 ASR 248
S+
Sbjct: 250 DSK 252
>gi|345887621|ref|ZP_08838790.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
gi|345041620|gb|EGW45761.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
Length = 345
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 90 GEIDP--------RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 141
G +DP RG PY WGT+ + K + +++ I+ WKDL RPE GR+
Sbjct: 105 GNLDPASLNQPFDRGNALTIPYMWGTVGLLVNK---KAVDVSTIKSWKDLARPEFKGRVL 161
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
+ + R+ G LK G S NS N D A + L L R+FD T +AF
Sbjct: 162 LSDDLRDTFGVGLKACGYSINSTNPDEIKAA-----YEWLKALKPSVRVFDVTATKQAFI 216
Query: 202 IGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+V + W+ D A++ ++ +VP+ G +W D +AIPA +
Sbjct: 217 SEEVVAGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDNFAIPAGAE 263
>gi|386825143|ref|ZP_10112270.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
gi|386378000|gb|EIJ18810.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
Length = 369
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 52/312 (16%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
K+ A S Y DLV ++L K + EP+ ++ + +K L + + ND
Sbjct: 70 KLMAGSTGY---DLVVPSSNFLERQSKAGIFEPLDKSKMPN-YKNLDPEMLQLVAHND-- 123
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 143
+ + PY T I Y K + AP++ W + +PE + +S +
Sbjct: 124 ----KDNKYGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFL 179
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGI 202
++P E+ +VL Y+G NS N A +L L L R F S+ Y+
Sbjct: 180 DAPSEIYATVLHYLGKDPNSTN-----AADYTGAANDLLLKLRPNIRYFHSSQYINDLAN 234
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGG 256
GD+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++ +
Sbjct: 235 GDICVAIGWSGDVMQAANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAKNKDAA--- 291
Query: 257 RVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNL 316
+Q++ F L K +V+ G S VK L+ + N+
Sbjct: 292 ---------YQFLNFLL--------KPDVMAGISNFVYYANAVKDSTPLVNADIRNNPNV 334
Query: 317 IVGVPPAEILAR 328
PPA++ A+
Sbjct: 335 Y---PPADLRAK 343
>gi|157369888|ref|YP_001477877.1| putrescine ABC transporter periplasmic-binding protein [Serratia
proteamaculans 568]
gi|157321652|gb|ABV40749.1| extracellular solute-binding protein family 1 [Serratia
proteamaculans 568]
Length = 369
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 133/312 (42%), Gaps = 52/312 (16%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
K+ A S Y DLV ++L K + EP+ ++ + +K L + + ND
Sbjct: 70 KLMAGSTGY---DLVVPSSNFLERQSKAGIFEPLDKSKMPN-YKNLDPEMLQLVAHND-- 123
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 143
+ + PY T I Y K + AP++ W + +PE + +S +
Sbjct: 124 ----KDNKYGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFL 179
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGI 202
++P EV +VL Y+G NS N A +L L L R F S+ Y+
Sbjct: 180 DAPSEVYATVLHYLGKDPNSTN-----AADYTGAANDLLLKLRPNIRYFHSSQYINDLAN 234
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGG 256
GD+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++ +
Sbjct: 235 GDICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAKNKDAA--- 291
Query: 257 RVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNL 316
+Q++ F + K +V+ G S VK L+ + + N+
Sbjct: 292 ---------YQFLNFLM--------KPDVMAGISNFVYYANAVKDSTPLVNAEVRNNPNV 334
Query: 317 IVGVPPAEILAR 328
PPA++ A+
Sbjct: 335 Y---PPADLRAK 343
>gi|398879044|ref|ZP_10634147.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398197590|gb|EJM84567.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 362
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQQNLALL 184
+ PE + +SM++S EV ++L YMG S N D + A K+ S++ +
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDYKKAEAKLLSIRPYITY- 215
Query: 185 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 238
F S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW
Sbjct: 216 ------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWF 269
Query: 239 DLWAIPA 245
DL AIPA
Sbjct: 270 DLLAIPA 276
>gi|452877940|ref|ZP_21955185.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
gi|452185377|gb|EME12395.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
Length = 353
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 84 LRRNDAGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----EL 136
L+ DAG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++
Sbjct: 100 LKNEDAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLQKI 158
Query: 137 AGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTH 195
GR+++++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+
Sbjct: 159 RGRVTVMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSS 212
Query: 196 YLKAFGIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 249
Y+K +G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 213 YIKELTLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDSMVIHKGS-- 270
Query: 250 ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
R P L +++I+F L A ++ G +P+A +K PE
Sbjct: 271 ---------RNPD-LAYRFIDFMLDGRNASELANQIGTG-TPNAAALPFIK-PE 312
>gi|398954989|ref|ZP_10676221.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398151733|gb|EJM40272.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLHKCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F+S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNEEDYKKATAK------LLAVRPYVTYFNSSKYITDLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VAVG+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 234 CVAVGFSGDIFQARNRAQEAKKGINIAYAIPKEGGALWFDMLAIPKDS 281
>gi|261253386|ref|ZP_05945959.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417953143|ref|ZP_12596191.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260936777|gb|EEX92766.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342817675|gb|EGU52552.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 369
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 26/177 (14%)
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----IS 141
A +DP ++ PY WGT I Y K AP++ W+ +++PE + +
Sbjct: 120 ADTVDPNND-YSIPYLWGTTGIGYNVEKVAAVLGKDAPVDSWELVFKPENMEKLAQCGVG 178
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR----LFDSTHYL 197
+N+P E++ + L Y+G NS +Q+ L Q R F S+ Y+
Sbjct: 179 FLNAPSEIMAASLNYLGKDPNSTKTS--------DYKQDALALLKQVRPYVTYFHSSQYI 230
Query: 198 KAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD+ VA+GWS DVL A R + +A +PK GA W DL AIP ++
Sbjct: 231 NDLANGDICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAK 287
>gi|443477176|ref|ZP_21067041.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443017738|gb|ELS32116.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 382
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 30/251 (11%)
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
RG +++ P GT IAY + DW LW+ + RI++VN PREVIG L
Sbjct: 150 RGAVFSIPVSLGTTGIAYNVEAVKSIVGEEPTDWSYLWQHKNKLRITLVNDPREVIGMAL 209
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
+ SYNS + Q+ +++ + +AN F + + GD+ + + +S D
Sbjct: 210 HTLSYSYNSKE-ESQIEHAFQKLRELMPAIAN----FSTDAWRDPLASGDLMMCMAFSGD 264
Query: 215 VLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 274
+ ++ NV V+P +G S+W D AIP + I G H WI + +
Sbjct: 265 AISLSRQNPNVKYVLPNNGTSIWTDTIAIPRGA----PNIEG--------AHAWINYVM- 311
Query: 275 TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE-ILARCEFLE 333
K E+ S + T KL + L+ D I + P+E I+A+C+ +
Sbjct: 312 -------KPEIAAKISDANSFGTTNKLAKSLIP----DDLKAIKALEPSETIIAKCDRIT 360
Query: 334 PLSEATLSDYE 344
L L Y+
Sbjct: 361 KLDPEALQIYD 371
>gi|431929348|ref|YP_007242382.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
gi|431827635|gb|AGA88752.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
Length = 361
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 85/172 (49%), Gaps = 21/172 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G AAPY WGT I Y K + + I+ W ++ PE A + I+ ++S
Sbjct: 117 DP-GNAHAAPYLWGTNGIGYNVEKVKAALGVDEIDSWSVIFEPENAAKLASCGIAFLDSA 175
Query: 147 REVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E+I ++L Y+G NS N D Q A ++ L + R F S+ Y+ G++
Sbjct: 176 DEMIPAMLNYLGLDPNSENAADYQKA------EEKLLAVRPHVRYFHSSKYISDLANGNI 229
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLE 250
VA G+S DV A R +A +P GA+LW D+ AIPA AS +E
Sbjct: 230 CVAAGFSGDVFQAAARAEEAGKGIEIAYAIPAEGANLWFDMLAIPADASNVE 281
>gi|257454396|ref|ZP_05619658.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
gi|257448162|gb|EEV23143.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
Length = 380
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 39/257 (15%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ PY WG+ IA + K A + W DLW+PE GR+ ++N R+V
Sbjct: 149 FDPENK-FSIPYLWGSSGIAVNTKRIAK---ASLSSWNDLWKPEYEGRVMLMNDIRDVFT 204
Query: 152 S---VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
L Y G++ N I + L L R F+S F G+ ++
Sbjct: 205 MSLLTLGYNGSTKNPEAIK--------QAYEKLTKLMPNVRTFNSDAPRMPFMEGETYLG 256
Query: 209 VGWSSDVLPAVKR-MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
+ W+ +V+ A + M + V PK GA +W D IP ++ H+
Sbjct: 257 LAWNGEVIMAQDQGMPELDFVYPKEGAIMWMDNMVIPKNAKNNDNA------------HK 304
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
+I+F L+ A +E+ G SP+ E ++P EL N IV PPA++L
Sbjct: 305 FIDFILRPKYAAMISEEIGYG-SPN--EAAKKEMPPELA-------NNPIV-YPPADLLK 353
Query: 328 RCEFLEPLSEATLSDYE 344
F E + + ++ Y+
Sbjct: 354 HAMFREDVGDEIMALYQ 370
>gi|385330681|ref|YP_005884632.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
gi|311693831|gb|ADP96704.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
Length = 368
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 25/178 (14%)
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR----- 139
+D ++DP G +A PY WGT Y + + ++ + AP + W ++ PE+ G+
Sbjct: 115 DDLEKVDP-GSQFALPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLATGG 173
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI--SVQQNLALLANQARLFDSTH 195
I+M++S E++ + + Y+G NSNN D GG++ +++ N+ F S+
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAIRPNIT-------YFHSSR 226
Query: 196 YLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 247
Y+ GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 227 YIGDLANGDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|398944508|ref|ZP_10671287.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398158081|gb|EJM46442.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 362
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVF 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLA 185
+ PE + +SM++S EV +VL YMG S N D + A K L +
Sbjct: 157 FEPENLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAK------LLTIR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW D
Sbjct: 211 PYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFD 270
Query: 240 LWAIPA 245
L A+PA
Sbjct: 271 LLAVPA 276
>gi|398350258|ref|YP_006395722.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
gi|390125584|gb|AFL48965.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
Length = 364
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 122/281 (43%), Gaps = 47/281 (16%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIE-- 126
D+ LS+ W V + R + DP G +A Y WGT I Y K K L E
Sbjct: 98 DKSKLPNLSNMWNVIMER--TAQYDP-GNEYAVDYMWGTTGIGYNVEKM-KEILGSDEKP 153
Query: 127 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQN 180
+W ++ PE+A + I +++SP ++I S L Y+G + +S+ DL A +
Sbjct: 154 NWDVVFNPEIAAKFKDCGIHLLDSPTDIIPSALAYLGLNPDSHEQADLDKAA------EL 207
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + V +P GA
Sbjct: 208 LLKVRPYIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEAKSGVTVDYSIPAQGA 267
Query: 235 SLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 294
+W D+ AIPA + + H++I + + K EVI AS
Sbjct: 268 QMWFDMLAIPADAPHVAEA------------HEFINYMM--------KPEVIAKASNYVF 307
Query: 295 ETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
K ++ L + +DT + PP ++ + + P
Sbjct: 308 YANGNKASQQFLDKEVLEDTAI---YPPEAVMQKLFTVTPF 345
>gi|448241410|ref|YP_007405463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
gi|445211774|gb|AGE17444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
Length = 369
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
K+ A S Y DLV ++L + + EP+ ++ + +K L + + ND
Sbjct: 70 KLMAGSTGY---DLVVPSSNFLERQSQAGIFEPLDKSKMPN-YKNLDPEMLKLVAHND-- 123
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 143
+ + PY T I Y K + AP++ W + +PE + +S +
Sbjct: 124 ----KDNKYGIPYLMVTTGIGYNVDKVKAALGKDAPVDSWDLILKPENLEKLKSCGVSFL 179
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGI 202
++P EV +VL Y+G NS N A +L L L R F S+ Y+
Sbjct: 180 DAPSEVYATVLHYLGKDPNSTN-----AADYTGAANDLLLKLRPNIRYFHSSQYINDLAN 234
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGG 256
GD+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++ +
Sbjct: 235 GDICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAKNKDAA--- 291
Query: 257 RVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNL 316
+Q++ F + K +V+ G S VK L+ + ++ N+
Sbjct: 292 ---------YQFLNFLM--------KPDVMAGISNYVYYANAVKDSTPLVNAEVRENPNV 334
Query: 317 IVGVPPAEILAR 328
PPA++ A+
Sbjct: 335 Y---PPADLRAK 343
>gi|157375543|ref|YP_001474143.1| putrescine-binding periplasmic protein [Shewanella sediminis
HAW-EB3]
gi|157317917|gb|ABV37015.1| putrescine-binding periplasmic protein precursor [Shewanella
sediminis HAW-EB3]
Length = 362
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 46/229 (20%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPR------- 95
DLV S+L IK + +P+ D+ K H +DP+
Sbjct: 74 DLVVSSGSFLQRQIKVGVFQPL----DKSRLKNYHH-------------LDPKVLDIVAS 116
Query: 96 ---GKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
G A PY WGT I Y K K P+ W+ L++ ++ + ++MV++P
Sbjct: 117 FDEGNQHAIPYMWGTTGIGYNIDKVSKILGNKPVNTWELLFQVDIVSKFTDCGVAMVDAP 176
Query: 147 REVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
EV+ ++LKY+G + NS ++ DL++ V+++L + F S+ Y+ G++
Sbjct: 177 SEVVSAMLKYLGKNPNSQDLADLKL------VEEHLLKIRPYITYFHSSSYVTDLASGNI 230
Query: 206 WVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASR 248
+A+GWS DV A R NV V+P+ GA WAD + I + S+
Sbjct: 231 CLAMGWSGDVFMAANRAIEAKNGINVNYVIPREGAQGWADTFNITSDSK 279
>gi|148652871|ref|YP_001279964.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
gi|148571955|gb|ABQ94014.1| extracellular solute-binding protein, family 1 [Psychrobacter sp.
PRwf-1]
Length = 374
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 39/257 (15%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WG+ IA KS+ ++ I W DLWRPE GR+ ++N R+V
Sbjct: 143 FDPQNK-FSVPYLWGSSGIAVNKSRI---DINSITSWNDLWRPEFEGRVMLMNDLRDVFT 198
Query: 152 S---VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
L Y +++ +I+ + Q L+ L R F+S F G+ ++
Sbjct: 199 MGLLTLGYPATTHDPKHIE--------AAYQKLSKLMPNVRTFNSDAPRMPFMEGETYLG 250
Query: 209 VGWSSDVLPAVKR-MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
+ W+ +V+ A + M + V PK G +W D +IP ++ +
Sbjct: 251 LAWNGEVIMAQDQGMPELDFVYPKEGVIMWMDNMSIPKNAKNRENA------------YA 298
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
+I++ L+ A +E+ G SP+ E K P+ N + PP ++L
Sbjct: 299 FIDYLLRPDNAAIISEEIGYG-SPN----------ESAKKLMPADIANNQIIYPPDDLLG 347
Query: 328 RCEFLEPLSEATLSDYE 344
F E + + T++ Y+
Sbjct: 348 HALFREDVGDTTMALYQ 364
>gi|440288330|ref|YP_007341095.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
gi|440047852|gb|AGB78910.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
Length = 370
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 31/269 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W +++PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGADAPVNSWDLIFKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNVRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH- 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLMKPEVVAHI 308
Query: 267 -QWIEFCLQTARALPFKQEVI---PGASP 291
+ + + P E I PG P
Sbjct: 309 SDHVFYANANKASTPLVSEAIRNNPGIYP 337
>gi|358451127|ref|ZP_09161561.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357224360|gb|EHJ02891.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 368
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 25/178 (14%)
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR----- 139
+D ++DP G +A PY WGT Y + + ++ + AP + W ++ PE+ G+
Sbjct: 115 DDLEKVDP-GSQFALPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLAAGG 173
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI--SVQQNLALLANQARLFDSTH 195
I+M++S E++ + + Y+G NSNN D GG++ +++ N+ F S+
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIRKGGEVIKAIRPNIT-------YFHSSR 226
Query: 196 YLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 247
Y+ GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 227 YIADLANGDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|453062799|gb|EMF03787.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Serratia marcescens VGH107]
Length = 368
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
K+ A S Y DLV ++L + + EP+ ++ + +K L + + ND
Sbjct: 70 KLMAGSTGY---DLVVPSSNFLERQSQAGIFEPLDKSKMPN-YKNLDPEMLKLVAHND-- 123
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMV 143
+ + PY T I Y K + AP++ W + +PE + +S +
Sbjct: 124 ----KDNKYGIPYLMVTTGIGYNVDKVKAALGKDAPVDSWDLILKPENLEKLKSCGVSFL 179
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGI 202
++P EV +VL Y+G NS N A +L L L R F S+ Y+
Sbjct: 180 DAPSEVYATVLHYLGKDPNSTN-----AADYTGAANDLLLKLRPNIRYFHSSQYINDLAN 234
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGG 256
GD+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++ +
Sbjct: 235 GDICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAKNKDAA--- 291
Query: 257 RVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNL 316
+Q++ F + K +V+ G S VK L+ + ++ N+
Sbjct: 292 ---------YQFLNFLM--------KPDVMAGISNYVYYANAVKDSTPLVNAEVRENPNV 334
Query: 317 IVGVPPAEILAR 328
PPA++ A+
Sbjct: 335 Y---PPADLRAK 343
>gi|227499864|ref|ZP_03929957.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
gi|227217973|gb|EEI83246.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
Length = 362
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 124/290 (42%), Gaps = 42/290 (14%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEI----DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP 124
DQ K L HK V L D + DP + ++ PY WG+ I Y K++ + +
Sbjct: 99 DQGLLKKLDHKKIVGLDNIDKRFLNLAYDPENE-YSIPYLWGSFGIIYNTKKYKAEDFSS 157
Query: 125 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID--LQVAGGKISVQQNL- 181
WK+LW P+ G I + RE +G L S N+ + D ++V+ + N+
Sbjct: 158 ---WKNLWDPKFKGEILSFDGARETLGIGLLADNLSLNTCDKDKLVRVSNELVGYMANVR 214
Query: 182 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 241
A+LA++ R++ +G+ V + +S D A+ ++A +PK G+++W D
Sbjct: 215 AILADEIRMY--------MALGEANVGITFSGDAASAIDSNPDLAYAIPKEGSNIWFDSM 266
Query: 242 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 301
IP S+ + + +I F L+ A E I A+P+ L+
Sbjct: 267 VIPKTSK------------NTEAAYAFINFMLRAENAAQ-NAEYISYATPNKKALALI-- 311
Query: 302 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 351
P+ N + P +++ R E + L + T Y L DL+
Sbjct: 312 -------DPAMRNNKTL-YPDDDVIDRLEVFKALDKKTTILYNDLFLDLK 353
>gi|120555050|ref|YP_959401.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8]
gi|120324899|gb|ABM19214.1| extracellular solute-binding protein, family 1 [Marinobacter
aquaeolei VT8]
Length = 368
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 25/178 (14%)
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR----- 139
+D +IDP G ++ PY WGT Y + + ++ + AP + W ++ PE+ G+
Sbjct: 115 DDLEKIDP-GSQFSLPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLAAGG 173
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI--SVQQNLALLANQARLFDSTH 195
I+M++S E++ + + Y+G NSNN D GG++ +V+ N+ F S+
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAVRPNIT-------YFHSSR 226
Query: 196 YLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 247
Y+ GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 227 YIGDLANGDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|119483298|ref|ZP_01618712.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
gi|119458065|gb|EAW39187.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
Length = 367
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 37/247 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 150
DP + ++ P WGT + Y + P +DWK LW + E++ R +++N REV+
Sbjct: 138 DPANR-YSVPISWGTTGLIYNSRLLKD---VP-QDWKYLWEHQREISKRFTLLNDVREVM 192
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ L+ +G SYNS + Q+ + LA L F + + +GD+ +A+
Sbjct: 193 GATLRMLGYSYNSTDPQ-QIRQAY----EKLAELQPAIASFTTDAWRPQIIVGDLLMAMC 247
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IHQWI 269
+S+D + ++ + PKSG+SLW D IP ++ P+P +QW+
Sbjct: 248 YSADAAEIMPENEDLRYITPKSGSSLWTDTLVIPKSA-------------PNPDGAYQWM 294
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
F LQ A E + A+PS L KLP+ L D L PP ++ R
Sbjct: 295 NFMLQPEIAAQVV-ERLSFATPSQL--AFRKLPKSL-----RDDPTLF---PPESVIERS 343
Query: 330 EFLEPLS 336
E L P+S
Sbjct: 344 ESLAPIS 350
>gi|354586089|ref|ZP_09004762.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
gi|353183065|gb|EHB48597.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
Length = 350
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 33/300 (11%)
Query: 11 QMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQ 70
+ N+ + D NN + K+KA + Y DL+ D + I+ L+EP+ +
Sbjct: 53 KFNVKVTYDNYANNEDL-LAKIKAGGSGY---DLIQPSDYMVKTMIEGDLLEPL-DMNNI 107
Query: 71 DWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKD 130
F +S +K DP G ++ Y G IAY K + I W+D
Sbjct: 108 PNFVNISETFK-------NPSFDP-GNKYSIVYTSGVTGIAYNKKYVKDE----INSWED 155
Query: 131 LWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARL 190
LW PE G++ +++ RE+IG LK G S NS + ++ + ++ LL N
Sbjct: 156 LWNPEYKGKVLLLDDNREMIGMALKKQGKS-NSTTDEAEINAAALDLK---TLLPN-VLA 210
Query: 191 FDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR-- 248
FD+ + + + W+A WS D + +VA VVP+ GA++++D +AIP ++
Sbjct: 211 FDTDNIKQKMIQEEGWIATVWSGDAAFIAEENPDVAYVVPEEGATIFSDNYAIPKGAKNK 270
Query: 249 -LETKQIGGRVRGP-SPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELL 306
L K I + S +++I + +A+ F E T++ L +E L
Sbjct: 271 ELAEKFINFMLEPEVSAKNYEYIGYSNPNTKAMEFHSE-------DYRSNTMINLTDEEL 323
>gi|338738412|ref|YP_004675374.1| putrescine ABC transporter periplasmic-binding protein
[Hyphomicrobium sp. MC1]
gi|337758975|emb|CCB64800.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Hyphomicrobium sp. MC1]
Length = 372
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKW-KVYLRRNDAGEIDPRGKIWAA 101
D+V S+LS IK + + + A+ L + W +VY N + DP G +A
Sbjct: 84 DVVVPTASFLSRQIKAGVFQKLDKAK----LPNLKYAWPEVY---NRIAQYDP-GNEYAV 135
Query: 102 PYRWGTMVIAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
+ WGT + Y + K ++ AP+ +++PE+A + I M++SP ++I L
Sbjct: 136 NWMWGTTGVGYNEGKIKERMADAPVNSLDMIFKPEIAAKFKDCGIYMLDSPEDIIPVALN 195
Query: 156 YMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G N+ N D Q V+ L + + F S+ Y+ A GD +A+GWS D
Sbjct: 196 YLGLDPNTKNPEDFQ------KVEDMLLKIRPYIKKFHSSEYINALANGDACMALGWSGD 249
Query: 215 VLPAVKRMS---NVAVV---VPKSGASLWADLWAIPAASR 248
+L A R N V+ +PK G +W D+ AIPA ++
Sbjct: 250 ILQAASRAEEAKNGQVIKYNIPKEGTQMWFDMMAIPADAK 289
>gi|427419359|ref|ZP_18909542.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425762072|gb|EKV02925.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 381
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 135/318 (42%), Gaps = 71/318 (22%)
Query: 39 YMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKI 98
YMA +++ +G L+ K RL+ + KWK + D
Sbjct: 118 YMATEMIGLG--MLTELDKSRLVG----------LDKMREKWKSPVYDED--------NT 157
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKY 156
+ PY WGT + Y AP DW LW L+ +++M++ RE +G+VL
Sbjct: 158 HSIPYSWGTTGLLYNSEVLTT---APT-DWDYLWDNSDVLSRKMTMLDDVRETMGAVLSS 213
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G SYN+ + L+ A Q L L F S + GD+ +++ +S +
Sbjct: 214 LGYSYNATDPAQLEEA------YQKLLELKPSLASFKSFGWQDELLSGDLLLSMVYSVEG 267
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQ 274
+P N V+P+SG+S+W D IPA A +E ++WI F LQ
Sbjct: 268 IPVSLENPNFKYVIPESGSSVWTDTMVIPASAPNVEAA-------------YEWINFNLQ 314
Query: 275 ------TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
T L F A+P+ T+ L +ELL K NL PP +ILA+
Sbjct: 315 PQVSKDTVERLFF-------ATPNGEAMTM--LSQELLDNK-----NLF---PPEDILAK 357
Query: 329 CEFLEPLSEAT-LSDYEW 345
CE + P+ EA L D W
Sbjct: 358 CEGIAPVGEANALYDEYW 375
>gi|332687056|ref|YP_004456830.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius ATCC 35311]
gi|379727040|ref|YP_005319225.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius DAT561]
gi|332371065|dbj|BAK22021.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD (TC 3.A.1.11.1) [Melissococcus plutonius ATCC
35311]
gi|376317943|dbj|BAL61730.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius DAT561]
Length = 357
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 26/223 (11%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
F K++ Y D+ + + IK +++ PI D + L++ + +L ++
Sbjct: 74 FTKIQQGGTAY---DIAIPSEYMIQKMIKAKMLLPI----DHSKLRGLTNIHEAFLNQS- 125
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
DP+ + ++ PY WGT+ I Y K N+ + W DLWRPEL + +++ RE
Sbjct: 126 ---FDPKNR-YSIPYFWGTLGIIYNDKFIEKSNM---QHWDDLWRPELKNNLMLIDGARE 178
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDV 205
V+G L +G S NS NN L+ A K++ + N+ A++A++ +++ +
Sbjct: 179 VLGFSLNSLGYSLNSKNNEQLKEAAHKLNHLTSNVKAIVADEIKMYMINE--------ES 230
Query: 206 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VAV +S + +++ ++ V+P G++LW D IP +
Sbjct: 231 AVAVTFSGEAAEMLEQNKHLHYVIPSEGSNLWFDNIVIPKTVK 273
>gi|422356129|ref|ZP_16436821.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|422763989|ref|ZP_16817742.1| extracellular solute-binding protein [Escherichia coli E1167]
gi|422775327|ref|ZP_16828983.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|323947122|gb|EGB43133.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|324015948|gb|EGB85167.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|324116167|gb|EGC10090.1| extracellular solute-binding protein [Escherichia coli E1167]
Length = 395
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ ++PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 312
>gi|186686044|ref|YP_001869240.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186468496|gb|ACC84297.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 361
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 39/249 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVI 150
DP + ++ P+ WGT + Y K + AP +DW LW+ + L R++++N REV+
Sbjct: 133 DPNNR-YSIPFNWGTTGLLYNSEKIKD---AP-QDWDYLWQNQEKLNQRMTLLNDVREVM 187
Query: 151 GSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G+ L+ +G SYNS N +++ A K+ V L FD+ + GD+ +A+
Sbjct: 188 GATLRMLGYSYNSKNEQEIKQAYEKLKV------LKPAIARFDTDAWQNQILAGDLLLAM 241
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
+S+D + + + V+P+SG+SLW D IP + + G + WI
Sbjct: 242 CYSADAVKIAQENPKLKYVIPRSGSSLWTDTIVIPKTA----PNLAG--------AYAWI 289
Query: 270 EFCLQTARALPFKQEV-IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
LQ A Q + I + + E +LP+ + + NL P +LA
Sbjct: 290 NMILQPELAAQISQRLSISTPNRAGFE----QLPKTI-----QDNANLF---PAESLLAN 337
Query: 329 CEFLEPLSE 337
CE + P+ +
Sbjct: 338 CERVTPVGD 346
>gi|430751704|ref|YP_007214612.1| spermidine/putrescine-binding periplasmic protein [Thermobacillus
composti KWC4]
gi|430735669|gb|AGA59614.1| spermidine/putrescine-binding periplasmic protein [Thermobacillus
composti KWC4]
Length = 356
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 46/274 (16%)
Query: 92 IDPR--------GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMV 143
IDPR G +++ PY WGT+ I Y F + P W LW P L I +V
Sbjct: 117 IDPRFMDMSYDPGNVYSVPYFWGTVGILYNPEAFDE----PPVSWDALWDPSLRNDILLV 172
Query: 144 NSPREVIGSVLKYMGASYNSNNID-LQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAF 200
+ RE+IG L +G S N + + LQ A K+ + N+ A++ ++ ++ + + A
Sbjct: 173 DGAREIIGMGLNSLGYSLNDTDEEHLQEALAKLKRLTPNVKAIVGDEIKMLMTGNEASA- 231
Query: 201 GIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRG 260
AV WS D + ++ VVP+ G++LW D IP +R + G
Sbjct: 232 -------AVVWSGDAAEIMWENEDLDYVVPEEGSNLWFDSMVIPKTAR--------NIEG 276
Query: 261 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
H +I F L A E + ++P+A T L LPEE+ +D
Sbjct: 277 A----HLFINFMLDPENAAR-NAEYVGYSTPNA--TALEMLPEEI-----REDERF---Y 321
Query: 321 PPAEILARCEFLEPLSEATLSDYEWLVADLQKPA 354
P E++AR E E L + L+ Y L + + A
Sbjct: 322 PGDELIARLEVYENLGKRMLAYYNDLFLEFKMHA 355
>gi|398853858|ref|ZP_10610447.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398238126|gb|EJN23862.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWGVLFEPENIKKLQSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPKDYEKATAK------LLAVRPYVTYFHSSKYIGDLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A R + N+A VPK G +LW D+ AIP S
Sbjct: 234 CVAIGFSGDIFQAKNRAAEAKKGVNIAYTVPKEGGALWFDMLAIPKDS 281
>gi|423203722|ref|ZP_17190290.1| hypothetical protein HMPREF1167_03873 [Aeromonas veronii AER39]
gi|404612500|gb|EKB09561.1| hypothetical protein HMPREF1167_03873 [Aeromonas veronii AER39]
Length = 361
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++LS IK + + D+ L++ V L++ D ++DP G +A P
Sbjct: 73 DLVVPSNNFLSKQIKAGAFQKL----DKSLLPNLANLDPVLLKQLD--KVDP-GHQYAVP 125
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W ++ PE ++S ++S E+I + L Y
Sbjct: 126 YLWGTNGIGYNVDKIKAVLGVDKIDSWATIFEPENMAKLSRCGVAFLDSADEMIPAALNY 185
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G NS+ A G I + L L + F S+ Y+ GD+ VA G+S D+
Sbjct: 186 LGLDPNSH------ATGDIKQAEALLLKVRPYVAYFHSSKYIGDLANGDICVAAGFSGDI 239
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--I 265
L A R +A +PK G +LW D+ AIP A + E + V P + +
Sbjct: 240 LQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPSDATNVKEAHALINYVLQPEVIAKV 299
Query: 266 HQWIEFCLQTARALPFKQEVI 286
++ + +RA F E +
Sbjct: 300 SDYVGYANPNSRAGEFMDEAV 320
>gi|418056504|ref|ZP_12694557.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
gi|353209723|gb|EHB75126.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
Length = 370
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----ISMVNSP 146
DP + +A Y WGT I Y +K ++ AP++ W +++PE+ + + M+++P
Sbjct: 126 DPDNQ-YAINYMWGTTGIGYNVAKVKERMADAPVDSWDLVFKPEILAKFKDCGVMMLDAP 184
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
+++ + L Y+G NSN D++ AG L + + F S+ Y+ A GD+
Sbjct: 185 DDILPAALNYLGLDPNSNKPEDIEKAGAL------LEKVRPYIQKFHSSEYINALANGDI 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+AVG+S D+L A R +A +PK GA +W D AIPA ++
Sbjct: 239 CIAVGYSGDILQARSRAEEAKNGQEIAYSLPKQGAQMWFDEMAIPADAK 287
>gi|354597990|ref|ZP_09016007.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
gi|353675925|gb|EHD21958.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
Length = 369
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVDKVKAALGADAPLDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y G NS+ + A S + L L R F S+ Y+ GD+
Sbjct: 182 PEEIFATVLNYQGKDANSS----KAADYNGSATELLLKLRPSIRYFHSSQYINDLANGDI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV+ A R NV +PK GA + D++A+PA ++
Sbjct: 238 CVAIGWAGDVMQAANRAKEAKNGVNVHYSIPKEGALAFFDVFAVPADAK 286
>gi|420241083|ref|ZP_14745247.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
gi|398072841|gb|EJL64038.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
Length = 365
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+ LS+ W V R + DP G +A Y WGT I Y K + PI+
Sbjct: 99 DKSKLPNLSNLWPVVSER--LAKYDP-GNQYAVNYMWGTTGIGYNVDKVKAALGNVPIDS 155
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 182
W L++PE A + I+++++ E L Y+G + +S + AGG + +
Sbjct: 156 WSVLFKPENAAKLKSCGINILDASDETFAIALNYLGKNPDSKDTKDLEAGGAVYNK---- 211
Query: 183 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASL 236
+ + F+S+ Y+ GD + +GWS DVL A R N+ ++PK G +
Sbjct: 212 -IRKSVKTFNSSAYIDELANGDSCITIGWSGDVLQAKTRAEEAKNGVNIEFIIPKEGTYM 270
Query: 237 WADLWAIPAASR 248
W D AIPA ++
Sbjct: 271 WFDNLAIPADAK 282
>gi|365848786|ref|ZP_09389257.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
gi|364569430|gb|EHM47052.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
Length = 370
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 114/271 (42%), Gaps = 31/271 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ R DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPELLKLIARH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGKDAPVNSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH- 266
A R N++ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLLRPDVIAHI 308
Query: 267 -QWIEFCLQTARALPFKQEVI---PGASPSA 293
+ + A P E + PG P A
Sbjct: 309 SDHVFYANVNKAATPLVSEAVRDNPGIYPPA 339
>gi|94499306|ref|ZP_01305844.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Bermanella marisrubri]
gi|94428938|gb|EAT13910.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Oceanobacter sp. RED65]
Length = 361
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 96 GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPRE 148
G + PY+WGT I Y +K AP + W ++ P+ + + IS+++S E
Sbjct: 120 GNEYGVPYQWGTTGIGYNVAKVEAILGEKAPTDSWDLIFDPKYSSKLKECGISVLDSAGE 179
Query: 149 VIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
V+ VL Y+G NS N G ++ + + + R F S+ Y+ GD+ VA
Sbjct: 180 VLPLVLNYLGLDPNSKN-----KGDYDKAEEKMLSIRDNIRYFHSSRYISDLANGDLCVA 234
Query: 209 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS 262
+GWS DV A R +A +PK G ++W+D+ AIP ++ +Q
Sbjct: 235 IGWSGDVFQAAARAEEAENGVEIAYYIPKEGTAMWSDMMAIPKDAK-NVEQ--------- 284
Query: 263 PLIHQWIEFCLQ 274
H+WI + L
Sbjct: 285 --AHKWINYILD 294
>gi|302037133|ref|YP_003797455.1| polyamine ABC transporter periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
gi|300605197|emb|CBK41530.1| Polyamine ABC transporter, periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
Length = 349
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP + ++ PY WG++ I Y + P + W LW GRISM+N REV G
Sbjct: 122 FDPERR-YSIPYLWGSVGIGYDAAVIP----TPPDSWAILWDERYKGRISMLNDQREVFG 176
Query: 152 SVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
+VL+ MG S NS + ++ A ++ Q+ L + + S HY + G+V +A
Sbjct: 177 AVLRSMGQSMNSTDPQVIEAAKERLLRQKPL------VKTYTSDHYDQLLASGEVVLAHA 230
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWAD 239
W V A+ ++ VVPK GA+LWAD
Sbjct: 231 WGGPVARAMVERPSIRYVVPKEGATLWAD 259
>gi|392423251|ref|YP_006459855.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985439|gb|AFM35432.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 361
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 100 AAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSV 153
AAPY WGT I Y K + + I+ W ++ PE A + I+ ++S E+I ++
Sbjct: 123 AAPYLWGTNGIGYNVEKVKAALGVDTIDSWAVIFEPENAEKLASCGIAFLDSADEMIPAM 182
Query: 154 LKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
L Y+G NS N D Q A ++ L + R F S+ Y+ G++ VA G+S
Sbjct: 183 LNYLGLDPNSENAADYQKA------EEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFS 236
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLE 250
DV A R +A +PK GA+LW D+ AIPA AS +E
Sbjct: 237 GDVFQAAARAEEAGKGVEIAYAIPKEGANLWFDMLAIPADASNVE 281
>gi|209918103|ref|YP_002292187.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SE11]
gi|417144631|ref|ZP_11986437.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|417152559|ref|ZP_11991350.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|417580120|ref|ZP_12230937.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|433091183|ref|ZP_20277478.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
gi|209911362|dbj|BAG76436.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE11]
gi|345342465|gb|EGW74859.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|386164514|gb|EIH26300.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|386169283|gb|EIH35791.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|431613376|gb|ELI82573.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
Length = 370
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ ++PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 287
>gi|15964467|ref|NP_384820.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
1021]
gi|384528421|ref|YP_005712509.1| extracellular solute-binding protein [Sinorhizobium meliloti
BL225C]
gi|433612474|ref|YP_007189272.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
gi|15073644|emb|CAC45286.1| Probable putrescine-binding periplasmic protein [Sinorhizobium
meliloti 1021]
gi|333810597|gb|AEG03266.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti BL225C]
gi|429550664|gb|AGA05673.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
Length = 364
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 26/185 (14%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIE--DWKDLWR 133
+S+ W + + R + DP G +A Y WGT I Y K K L E +W ++
Sbjct: 105 ISNMWDMVMERT--AQYDP-GNEYAVDYMWGTTGIGYNVEKM-KEILGTDEKPNWDVIFD 160
Query: 134 PELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQQNLALLAN 186
PE+A + I +++SP +++ S L Y+G + +S++ DL+ A + V+ N+
Sbjct: 161 PEIAAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNI----- 215
Query: 187 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 240
R F S+ Y+ A GD+ +AVG+S DV A R + V +P+ GA +W D+
Sbjct: 216 --RKFHSSEYINALANGDICLAVGFSGDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDM 273
Query: 241 WAIPA 245
AIPA
Sbjct: 274 LAIPA 278
>gi|334315175|ref|YP_004547794.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti AK83]
gi|384534820|ref|YP_005718905.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|407719548|ref|YP_006839210.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
gi|418399937|ref|ZP_12973482.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|334094169|gb|AEG52180.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti AK83]
gi|336031712|gb|AEH77644.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|359506054|gb|EHK78571.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|407317780|emb|CCM66384.1| Putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
Length = 364
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 26/185 (14%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIE--DWKDLWR 133
+S+ W + + R + DP G +A Y WGT I Y K K L E +W ++
Sbjct: 105 ISNMWDMVMERT--AQYDP-GNEYAVDYMWGTTGIGYNVEKM-KEILGTDEKPNWDVIFD 160
Query: 134 PELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQQNLALLAN 186
PE+A + I +++SP +++ S L Y+G + +S++ DL+ A + V+ N+
Sbjct: 161 PEIAAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNI----- 215
Query: 187 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 240
R F S+ Y+ A GD+ +AVG+S DV A R + V +P+ GA +W D+
Sbjct: 216 --RKFHSSEYINALANGDICLAVGFSGDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDM 273
Query: 241 WAIPA 245
AIPA
Sbjct: 274 LAIPA 278
>gi|398904320|ref|ZP_10652192.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398175972|gb|EJM63708.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 365
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 39/285 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + +P+ ++ +W K L+ V L+ +A DP G A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQPLDKSKLPNW-KNLN---PVLLK--NASASDP-GNSHAFP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I Y +K ++ AP+ W L++PE A + IS ++SP E++ + L
Sbjct: 129 YMWGSIGIGYNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G NS + K + + AL F S+ Y+ G++ VAVG+S
Sbjct: 189 YLGYPVNSQD--------KAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYS 240
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL 264
DVL A R V +PK GA + D+ AIP AA+ + P +
Sbjct: 241 GDVLQAKARAKEAGDKVKVEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDII 300
Query: 265 --IHQWIEFCLQTARALPFKQEVI---PGA-SPSALETTLVKLPE 303
+ I + A A P E I PG+ P A+ TL +P+
Sbjct: 301 AEVTNNIGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|432830829|ref|ZP_20064412.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
gi|431379670|gb|ELG64599.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
Length = 370
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ ++PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 287
>gi|432464817|ref|ZP_19706923.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|432582913|ref|ZP_19819323.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|433071904|ref|ZP_20258598.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|433119402|ref|ZP_20305109.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|433182391|ref|ZP_20366686.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
gi|430996623|gb|ELD12899.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|431119929|gb|ELE22928.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|431592074|gb|ELI62980.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|431648264|gb|ELJ15663.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|431711030|gb|ELJ75392.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
Length = 370
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA ++ D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMVFFDVFAMPADAK 287
>gi|332162254|ref|YP_004298831.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386307807|ref|YP_006003863.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|418242130|ref|ZP_12868647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433548238|ref|ZP_20504288.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
gi|318606319|emb|CBY27817.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325666484|gb|ADZ43128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860389|emb|CBX70699.1| putrescine-binding periplasmic protein [Yersinia enterocolitica
W22703]
gi|351778478|gb|EHB20631.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431790798|emb|CCO67328.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
Length = 369
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS +Q + L L R F S+ Y+ GD+
Sbjct: 182 PSEIFATVLNYLGKDPNS----IQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VAVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 238 CVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|404403552|ref|ZP_10995136.1| putrescine ABC transporter periplasmic protein [Pseudomonas
fuscovaginae UPB0736]
Length = 364
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAMLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG S NS N D ++A ++ L + F+S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLSPNSTNEKDYKLA------EEKLLKVRPYVTYFNSSKYISDLANGEI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVR 259
VA G+S D+ A KR ++A V+PK G +LW D+ AIP + G V+
Sbjct: 233 CVAAGFSGDIFQAKKRAEEAKKGVDIAYVIPKEGGNLWFDMLAIP--------KDAGNVK 284
Query: 260 GPSPLIHQWIEFCLQ 274
H +I + LQ
Sbjct: 285 EA----HAFINYLLQ 295
>gi|317485961|ref|ZP_07944816.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
gi|316922734|gb|EFV43965.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
Length = 345
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 90 GEIDP--------RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 141
G +DP +G PY WGT+ + K + +++ I+ WKDL RPE GR+
Sbjct: 105 GNLDPASLNQPFDKGNALTIPYMWGTVGLLVNK---KAVDVSTIKSWKDLARPEFKGRVL 161
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
+ + R+ G LK G S NS N D A + L L R+FD T +AF
Sbjct: 162 LSDDLRDTFGVGLKACGYSINSTNPDEIKAA-----YEWLKALKPSVRVFDVTATKQAFI 216
Query: 202 IGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+V + W+ D A++ ++ +VP+ G +W D +AIPA +
Sbjct: 217 SEEVVAGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDNFAIPAGAE 263
>gi|398907683|ref|ZP_10654002.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398171118|gb|EJM59030.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 362
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ +K + ++ +W K L K L +ND G + P
Sbjct: 74 DVVVPSNHFLARQVKAGAFLKLDRSQLPNW-KNLDPKLLALLEKNDPGNEH------SVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W + PE + +SM++S EV +VL Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGIDRIDSWAVFFEPENLKKLSQCGVSMMDSADEVFPAVLNY 186
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
MG S N D + A K L + F S+ Y+ GD+ VA G+S DV
Sbjct: 187 MGMDPRSENPADFKKAEAK------LMTIRPYITYFHSSKYVSDLANGDICVAFGYSGDV 240
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
A R N+A +PK G++LW DL AIPA
Sbjct: 241 FQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|237809505|ref|YP_002893945.1| extracellular solute-binding protein [Tolumonas auensis DSM 9187]
gi|237501766|gb|ACQ94359.1| extracellular solute-binding protein family 1 [Tolumonas auensis
DSM 9187]
Length = 366
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 27/185 (14%)
Query: 84 LRRNDAG------EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRP 134
L+ DAG E DP + PY GT I + K + P ++ W +++P
Sbjct: 106 LKNMDAGIMKLLAEKDPDNA-HSVPYLGGTTGIGFNPQKVAAV-MGPDFKLDSWDAVFKP 163
Query: 135 ELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR 189
E + +S +N+P E++ + L YMG NS N GK+ L+ L
Sbjct: 164 ENLAKLKKCGVSFLNAPTEIMATALHYMGKDPNSTNPADYREAGKL-----LSTLRPHIS 218
Query: 190 LFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM----SNVAV--VVPKSGASLWADLWAI 243
F S+ Y+ GD+ VA+GWS DV+ A R +NV V V+PK GA ++ D+ AI
Sbjct: 219 YFHSSQYINDLANGDICVAIGWSGDVMQAAARAEEAKNNVTVDYVIPKEGALVFYDMLAI 278
Query: 244 PAASR 248
PA S+
Sbjct: 279 PADSK 283
>gi|357026312|ref|ZP_09088415.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355541823|gb|EHH10996.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 365
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRP 134
+S+ W L R + DP G ++ Y WGT+ I Y K + I+ W + P
Sbjct: 106 ISNMWDTVLER--TAKYDP-GNEYSINYMWGTVGIGYNIKKVQAALGTDKIDSWDAFFNP 162
Query: 135 ELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR 189
E + + +++SP ++I + LKY+G NS + D +A ++ L + R
Sbjct: 163 ESLAKLKDCGVYVLDSPADIIPAALKYLGLDPNSTSPD-DIA----KAEETLLKIRPYIR 217
Query: 190 LFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAI 243
F S+ Y+ A GD+ +AVGWS DV A K+ + VPK GA +W D AI
Sbjct: 218 KFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYAVPKEGAQMWFDQMAI 277
Query: 244 PA 245
PA
Sbjct: 278 PA 279
>gi|258646316|ref|ZP_05733785.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
gi|260403707|gb|EEW97254.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
Length = 353
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP G ++ Y WG IAY +K+ K + W DLW+ E GR+ ++N REVIG
Sbjct: 126 DPSGD-YSVVYTWGVTGIAYN-TKYIKDTPSS---WNDLWKDEYKGRVILLNDNREVIGM 180
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
LK G S NS + + +V Q L L FD+ + F + W+ WS
Sbjct: 181 GLKKNGHSVNSKDPNEVTQ----AVDQ-LRKLTPNLLAFDTDTIKQKFIAEEAWIGTMWS 235
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
D K ++A ++PK GA +WAD +AIP ++
Sbjct: 236 GDASFTHKDNPDIAFIIPKEGAVIWADTFAIPKGAK 271
>gi|110803710|ref|YP_699248.1| spermidine/putrescine-binding periplasmic protein precursor
[Clostridium perfringens SM101]
gi|110684211|gb|ABG87581.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens SM101]
Length = 360
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP + ++ PY WGT+ I Y K P++ W LW P+ ++ M +S R+ +
Sbjct: 130 DPTNE-YSVPYMWGTVGIIYNTKKVSD----PVDSWNILWNPKYKDQVIMPDSVRDAMAV 184
Query: 153 VLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
K +G S N+ N+D ++ A ++ Q+ L+ A + D A G+ +AV W
Sbjct: 185 AEKKLGYSLNTENLDQIEAAKKELMTQKKDGLIL--AYMVDQVK--DAMVGGEASLAVAW 240
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
S D + ++R ++A +PK G++ W D IP ++ + ++I F
Sbjct: 241 SGDAVTMIERNPDLAYAIPKEGSNKWFDAIGIPKNAKHKENA------------EKFINF 288
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
+ A E I ++P+ L LPE++ K V P E L CE
Sbjct: 289 LCDSENAEQ-NVEYIGYSTPNTAAYDL--LPEDIRDNK--------VAYPDKESLKNCEV 337
Query: 332 LEPLSEATLSDYE--WL 346
L L Y+ WL
Sbjct: 338 FIDLPSKILRKYDEAWL 354
>gi|387813512|ref|YP_005428994.1| putrescine ABC transporter periplasmic-binding protein
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381338524|emb|CCG94571.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 368
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 25/174 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-------IS 141
++DP G ++ PY WGT Y + + ++ + AP + W ++ PE+ G+ I+
Sbjct: 119 KVDP-GSQFSLPYLWGTNGYGYNEGRIQEILGDTAPTDSWALVFDPEVTGKLAAGGCGIA 177
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI--SVQQNLALLANQARLFDSTHYLKA 199
M++S E++ + + Y+G NSNN D GG++ +V+ N+ F S+ Y+
Sbjct: 178 MLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAVRPNIT-------YFHSSRYIGD 230
Query: 200 FGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 247
GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 231 LANGDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|352106290|ref|ZP_08961341.1| extracellular solute-binding protein [Halomonas sp. HAL1]
gi|350597938|gb|EHA14063.1| extracellular solute-binding protein [Halomonas sp. HAL1]
Length = 367
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 96 GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-------MVNSP 146
G ++ PY WGT I Y + ++ + AP++ W L+ PE+ G +S M++S
Sbjct: 122 GSEYSVPYMWGTNGIGYNVERVKEILGDDAPLDSWALLFDPEITGALSEAGCGLSMLDSA 181
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ + Y+G S NID A G++ +A + + F S+ Y+ GD+
Sbjct: 182 DEMLSPAMAYLGLDPLSENIDDIEAAGEL-----IASVRDDMTYFHSSRYVSDLANGDIC 236
Query: 207 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
VA G+S DV A R ++ +PK GA+LW D+ A+PA
Sbjct: 237 VAAGYSGDVFQAAARAEEAGRDFSIGYSIPKEGAALWFDMMAVPA 281
>gi|409993243|ref|ZP_11276392.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
gi|291569868|dbj|BAI92140.1| putative spermidine/putrescine ABC transporter substrate-binding
protein [Arthrospira platensis NIES-39]
gi|409935915|gb|EKN77430.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
Length = 363
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 39/249 (15%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPRE 148
+ DP ++ P WGT + Y R + +P EDW+DLW + +L R++++N RE
Sbjct: 132 DYDP-NSTYSVPLSWGTTGLIYNS---RLLSSSP-EDWEDLWTYQDQLNRRLTLLNDVRE 186
Query: 149 VIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
V+G+ L+ +G SYNS N ++ A Q L L F + + +GD+ +
Sbjct: 187 VMGASLRRLGYSYNSTNPREINQA------YQELVKLRGAIASFTTDAWRPQMIVGDLLL 240
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IH 266
A+ +SSD + ++ + P SG+SLW D IP ++ P+P +
Sbjct: 241 AMCYSSDAAEVMPENEDLEYITPVSGSSLWIDTLVIPKSA-------------PNPEGAY 287
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
QWI F L+ A E + A+PS + +LP+EL +D L PP ++
Sbjct: 288 QWINFMLRPDIATQIV-ERLSFATPSLV--AYRQLPQEL-----REDPALF---PPESVI 336
Query: 327 ARCEFLEPL 335
A E + PL
Sbjct: 337 ANSETVSPL 345
>gi|365837890|ref|ZP_09379247.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
gi|364561081|gb|EHM38995.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
Length = 368
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY + T I Y K + AP+ W + +PE + +S +++
Sbjct: 122 DPDNK-YAIPYTFATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 180
Query: 146 PREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y+G NS++ D A + L L R F S+ Y+ GD
Sbjct: 181 PAEIYATVLNYIGKDPNSSDANDYNGAANDL-----LLKLRPNIRYFHSSQYINDLANGD 235
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETK 252
+ VAVGWS DV+ A R N+A +PK GA ++ D++A+PA ++ T+
Sbjct: 236 ICVAVGWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDVFAMPADAKNTTE 289
>gi|293396880|ref|ZP_06641154.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
gi|291420351|gb|EFE93606.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
Length = 369
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPENK-YAIPYLWATTGIGYNVDKVKAALGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y+G NS++ A +L L L R F S+ Y+ GD
Sbjct: 182 PSEIFATVLNYLGKDPNSSD-----AKDYTGPATDLLLKLRPSVRYFHSSQYINDLANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VA+GW+ DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 237 ICVAIGWAGDVMQASNRAKDAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|317491403|ref|ZP_07949839.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920950|gb|EFV42273.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 368
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY + T I Y K + AP+ W + +PE + +S +++
Sbjct: 122 DPDNK-YAIPYTFATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 180
Query: 146 PREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y+G NS++ D A + L L R F S+ Y+ GD
Sbjct: 181 PAEIYATVLNYIGKDPNSSDANDYNGAANDL-----LLKLRPNIRYFHSSQYINDLANGD 235
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETK 252
+ VAVGWS DV+ A R N+A +PK GA ++ D++A+PA ++ T+
Sbjct: 236 ICVAVGWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDVFAMPADAKNTTE 289
>gi|312963723|ref|ZP_07778194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
gi|311281758|gb|EFQ60368.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
Length = 364
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 30/194 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K ++ + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKQVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG + NS N D ++ L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPD-----DYKKAEEKLLKVRPYVTYFHSSKYISDLANGNIC 233
Query: 207 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRG 260
VA G+S DV A R S N+A V+PK G +LW D+ AIP + KQ
Sbjct: 234 VAAGFSGDVFQAKARASEAGKGVNIAYVIPKEGGNLWFDVLAIPKDAT-NVKQ------- 285
Query: 261 PSPLIHQWIEFCLQ 274
H +I + LQ
Sbjct: 286 ----AHAFINYLLQ 295
>gi|153812244|ref|ZP_01964912.1| hypothetical protein RUMOBE_02643 [Ruminococcus obeum ATCC 29174]
gi|149831651|gb|EDM86738.1| ABC transporter, solute-binding protein [Ruminococcus obeum ATCC
29174]
Length = 571
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 40 MAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIW 99
+A D++ D + I+ L+ I + D L + K YL + + + DP K +
Sbjct: 296 IAYDVICPSDYMIQRMIENDLLSEI----NFDNIPNLKNIGKQYLEQ--SRQFDPENK-Y 348
Query: 100 AAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 159
+ PY WGT+ I Y K + P++ W LW P+ I M +S R+ G LKY+G
Sbjct: 349 SVPYCWGTVGILYNKMMVDE----PVDSWSILWDPKYKDNILMQDSVRDAFGVTLKYLGY 404
Query: 160 SYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 219
S NS ++D + ++Q + QA + D K G + + V +S + +
Sbjct: 405 SLNSIDLDELTEAKNLLIEQKPLV---QAYVIDQVR-DKMIG-NEAALGVIYSGEAIYTQ 459
Query: 220 KRMSNVAVVVPKSGASLWADLWAIP 244
K N+ V+PK G+++W D W IP
Sbjct: 460 KENPNLEYVIPKEGSNIWIDSWVIP 484
>gi|126729921|ref|ZP_01745733.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
gi|126709301|gb|EBA08355.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
Length = 365
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIE 126
D++ L + W R + DP G +A Y WGT I K ++ AP++
Sbjct: 98 DKEQLPNLDNMWGTIEER--TAKYDP-GNEYAINYMWGTTGIGVNVPKVKELLGEDAPLD 154
Query: 127 DWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 181
W +++PE +++ +++P E++ + L Y+G +S++ D+ G +
Sbjct: 155 SWDLVFKPENMEKLAECGVHFLDAPAEMLPAALNYIGEDPDSHDPDVIAKAGDV-----Y 209
Query: 182 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGAS 235
A + + F S+ Y+ A G++ VAVGWS DVL A R + VA ++PK GA
Sbjct: 210 APIRPYIQKFHSSEYINALANGEICVAVGWSGDVLQARDRAAEADNGVEVAYIIPKEGAQ 269
Query: 236 LWADLWAIP 244
+W D+ A+P
Sbjct: 270 MWFDMMAVP 278
>gi|419305443|ref|ZP_13847353.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
gi|378151922|gb|EHX13024.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
Length = 325
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 35 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 87
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 88 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 147
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 148 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 203
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 204 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|386704035|ref|YP_006167882.1| putrescine ABC transporter periplasmic-binding protein, partial
[Escherichia coli P12b]
gi|383102203|gb|AFG39712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli P12b]
Length = 298
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 8 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 60
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 61 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 120
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 121 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 176
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 177 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 215
>gi|409396642|ref|ZP_11247622.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118824|gb|EKM95215.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 361
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 25/175 (14%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 139
L++ND G AAPY WGT I Y K + + I+ W L+ P+ A +
Sbjct: 113 LQKNDPG------NAHAAPYLWGTNGIGYNVEKVKAALGVDTIDSWAVLFEPQNAEKLAS 166
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHY 196
I+M++S E+I ++L Y+G NS N D + A ++ L + R F S+ Y
Sbjct: 167 CGIAMLDSADEMIPAMLNYLGLDPNSENPADYRKA------EEKLLAVRPHVRYFHSSKY 220
Query: 197 LKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
+ G++ VA G+S DV A R +A +PK G +LW D+ AIPA
Sbjct: 221 ISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPA 275
>gi|146311026|ref|YP_001176100.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter sp. 638]
gi|145317902|gb|ABP60049.1| extracellular solute-binding protein, family 1 [Enterobacter sp.
638]
Length = 370
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKMPNWKNLDPEVLKMVAKH------DPDNK-YALP 132
Query: 103 YRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K +K P++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKKALGTDVPLDSWDMVLKPENLAKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV +PK GA + D++A+PA ++
Sbjct: 249 WQAANRAKEAKNGVNVTYTIPKEGALAFFDVFAMPADAK 287
>gi|419395467|ref|ZP_13936249.1| potF [Escherichia coli DEC15B]
gi|378250079|gb|EHY09987.1| potF [Escherichia coli DEC15B]
Length = 325
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 35 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 87
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 88 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 147
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 148 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 203
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 204 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|271500855|ref|YP_003333880.1| family 1 extracellular solute-binding protein [Dickeya dadantii
Ech586]
gi|270344410|gb|ACZ77175.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech586]
Length = 369
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 110/252 (43%), Gaps = 43/252 (17%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 143
E DP G +A PY W T I Y K + AP+ W + +PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
++P E+ +VL Y G + NS N + K + L L N R F S+ Y+ G
Sbjct: 180 DAPAEIYATVLNYQGKNPNSTN---ESDYTKDATDLLLKLRPN-IRYFHSSQYINDLANG 235
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIGG 256
D+ VA+GW+ DV+ A R N++ +PK GA + D++AIP A L++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSA---- 291
Query: 257 RVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNL 316
+Q++ + L K EVI S K L+K + N+
Sbjct: 292 ---------YQFLNYLL--------KPEVIANISNHVYYANPNKEATALVKDDVRNNPNI 334
Query: 317 IVGVPPAEILAR 328
PPA+I A+
Sbjct: 335 ---YPPADIRAK 343
>gi|386817903|ref|ZP_10105121.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386422479|gb|EIJ36314.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 343
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 41/251 (16%)
Query: 90 GEIDPR--------GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS 141
G +DP+ G ++ PY WG+ IA + + A I W DLW P+ G++
Sbjct: 103 GNLDPKLLDKPFDPGNGYSIPYMWGSTGIAVNAAAI---DPASITGWADLWEPKWKGKLL 159
Query: 142 MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAF 200
+ + R + LK G S NS N +++VA Q+L L R+F++ + F
Sbjct: 160 LTDDLRGIFDMALKKNGFSSNSTNPEEIKVA------YQDLQKLMPNVRVFNADAPREPF 213
Query: 201 GIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRG 260
GDV + + WS + A K ++ + PK GASLW D AI A +
Sbjct: 214 LAGDVNLGMIWSGEASQAQKENKDIHYIYPKEGASLWVDNLAITAGAENVDNA------- 266
Query: 261 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
H++I++ L+ A ++++ S T L E ++ P +
Sbjct: 267 -----HKFIDYMLRPKVA----KQMVEKLGYSTPNTAARVLVSEAIRNDP-------IIF 310
Query: 321 PPAEILARCEF 331
PPAEIL + EF
Sbjct: 311 PPAEILEKGEF 321
>gi|194433166|ref|ZP_03065448.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|417672890|ref|ZP_12322349.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
gi|194418663|gb|EDX34750.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|332091100|gb|EGI96190.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
Length = 370
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLAPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432552849|ref|ZP_19789579.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
gi|431086421|gb|ELD92444.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
Length = 325
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 35 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 87
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 88 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 147
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 148 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 203
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 204 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|376006159|ref|ZP_09783485.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|375325462|emb|CCE19238.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
Length = 363
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 39/249 (15%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPRE 148
+ DP ++ P WGT + Y R + +P EDW+DLW + +L R++++N RE
Sbjct: 132 DYDP-NSTYSVPLSWGTTGLIYNS---RLLSNSP-EDWEDLWTYQDQLNRRLTLLNDVRE 186
Query: 149 VIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
V+G+ L+ +G SYNS N ++ A Q L L F + + +GD+ +
Sbjct: 187 VMGASLRRLGYSYNSTNPREINQA------YQELVKLRGAIASFTTDAWRPQMIVGDLLL 240
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IH 266
A+ +SSD + ++ + P SG+SLW D IP ++ P+P +
Sbjct: 241 AMCYSSDAAEVMPENEDLEYITPVSGSSLWIDTLVIPKSA-------------PNPEGAY 287
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
QWI F L+ A E + A+PS + +LP+EL +D L PP ++
Sbjct: 288 QWINFMLRPDIATQIV-ERLSFATPSLV--AYRQLPQEL-----REDPALF---PPESVI 336
Query: 327 ARCEFLEPL 335
A E + PL
Sbjct: 337 ANSETVSPL 345
>gi|408357686|ref|YP_006846217.1| spermidine/putrescine ABC transporter substrate-binding protein
[Amphibacillus xylanus NBRC 15112]
gi|407728457|dbj|BAM48455.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Amphibacillus xylanus NBRC 15112]
Length = 357
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 37/255 (14%)
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
G ++ PY WGT+ I + + W DLW P+L I +++ REVIG L
Sbjct: 128 EGNKYSVPYFWGTVGILFNPELLPDKSFTS---WNDLWDPDLENGILLIDGAREVIGMGL 184
Query: 155 KYMGASYNSNNID-LQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
+G S N N D L A K+ ++ N+ A++ ++ +L + + + V++ W
Sbjct: 185 NSLGYSLNDTNRDHLDEALEKLNTLTPNVKAIVGDENKLLMANN--------EAAVSIAW 236
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
S D + + VVP+ G++LW D IP + + G HQ+I F
Sbjct: 237 SGDARDIMWENEALTYVVPEEGSNLWFDNMVIP--------KTADNIEGA----HQFINF 284
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
L A E + ++P+ ++ + LPEE++ + PPAE+ R E
Sbjct: 285 MLDPEIA-ALNTEYVSYSTPN--QSAIELLPEEMVGDERF--------YPPAELTERLEV 333
Query: 332 LEPLSEATLSDYEWL 346
E L LS Y L
Sbjct: 334 YENLGREMLSLYNEL 348
>gi|417742354|ref|ZP_12390904.1| potF [Shigella flexneri 2930-71]
gi|417826927|ref|ZP_12473500.1| potF [Shigella flexneri J1713]
gi|332768025|gb|EGJ98211.1| potF [Shigella flexneri 2930-71]
gi|335576695|gb|EGM62940.1| potF [Shigella flexneri J1713]
Length = 353
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 63 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 115
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 116 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 175
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 176 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 231
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 232 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|323494348|ref|ZP_08099460.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
gi|323311511|gb|EGA64663.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
Length = 369
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----IS 141
A +DP ++ PY WGT I Y K AP++ W +++PE + +
Sbjct: 120 ADTVDPNND-YSIPYLWGTTGIGYNIEKVEAILGKDAPVDSWDLVFKPENMEKLAQCGVG 178
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLK 198
+N+P E++ + L Y+G NS + + K + LALL + F S+ Y+
Sbjct: 179 FLNAPSEIMAASLNYLGKDPNST----KTSDYK---KDALALLKDIRPYVTYFHSSQYIN 231
Query: 199 AFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD+ VA+GWS DVL A R + +A +PK GA W DL AIP ++
Sbjct: 232 DLANGDICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAK 287
>gi|417737718|ref|ZP_12386319.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
gi|332759765|gb|EGJ90068.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
Length = 353
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 63 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 115
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 116 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 175
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 176 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 231
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 232 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|452750133|ref|ZP_21949885.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
gi|452005783|gb|EMD98063.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
Length = 361
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 100 AAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSV 153
AAPY WGT I Y K + + I+ W ++ PE A + I+ ++S E+I ++
Sbjct: 123 AAPYLWGTNGIGYNVEKVKAALGVDRIDSWAVIFEPENAEKLASCGIAFLDSADEMIPAM 182
Query: 154 LKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
L Y+G NS N D Q A ++ L + R F S+ Y+ G++ VA G+S
Sbjct: 183 LNYLGLDPNSENAADYQKA------EEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFS 236
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLE 250
DV A R +A +PK GA+LW D+ AIPA AS +E
Sbjct: 237 GDVFQAAARAEEAGKGVEIAYAIPKEGANLWFDMLAIPADASNVE 281
>gi|3891734|pdb|1A99|A Chain A, Putrescine Receptor (Potf) From E. Coli
gi|3891735|pdb|1A99|B Chain B, Putrescine Receptor (Potf) From E. Coli
gi|3891736|pdb|1A99|C Chain C, Putrescine Receptor (Potf) From E. Coli
gi|3891737|pdb|1A99|D Chain D, Putrescine Receptor (Potf) From E. Coli
Length = 344
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 54 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 106
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 107 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 166
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 167 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 222
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 223 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 261
>gi|397167724|ref|ZP_10491164.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
gi|396090542|gb|EJI88112.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
Length = 370
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP G +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPDVLKMVAKH------DP-GNKYAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNIDKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NSN D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSNKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R NV +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVTYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307
>gi|91209888|ref|YP_539874.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli UTI89]
gi|117623034|ref|YP_851947.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli APEC O1]
gi|237707182|ref|ZP_04537663.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300991852|ref|ZP_07179677.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|331646122|ref|ZP_08347225.1| putrescine-binding periplasmic protein [Escherichia coli M605]
gi|422358904|ref|ZP_16439553.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|422368868|ref|ZP_16449272.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|422375650|ref|ZP_16455913.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|422378970|ref|ZP_16459173.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|91071462|gb|ABE06343.1| putrescine-binding periplasmic protein precursor [Escherichia coli
UTI89]
gi|115512158|gb|ABJ00233.1| putrescine-binding periplasmic protein precursor [Escherichia coli
APEC O1]
gi|226898392|gb|EEH84651.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300305462|gb|EFJ59982.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|315287314|gb|EFU46725.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|315299397|gb|EFU58649.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|324009780|gb|EGB78999.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|324013016|gb|EGB82235.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|331044874|gb|EGI17001.1| putrescine-binding periplasmic protein [Escherichia coli M605]
Length = 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 128 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 180
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 181 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 240
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 241 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 296
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 297 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 335
>gi|339489912|ref|YP_004704440.1| extracellular solute-binding protein [Pseudomonas putida S16]
gi|338840755|gb|AEJ15560.1| extracellular solute-binding protein [Pseudomonas putida S16]
Length = 381
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 139
L RND G +A PY WGT I Y K + + I+ W L+ PE +
Sbjct: 133 LERNDPGNQ------YAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLAK 186
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHY 196
++ ++S E++ +VL YMG NS N D Q A ++ L + F S+ Y
Sbjct: 187 CGVAFLDSADEMLPAVLNYMGLDPNSTNAKDYQAA------EKKLLAVRPYVTYFHSSKY 240
Query: 197 LKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ GD+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 241 ITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 298
>gi|302380568|ref|ZP_07269033.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna ACS-171-V-Col3]
gi|302311511|gb|EFK93527.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna ACS-171-V-Col3]
Length = 341
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 27/255 (10%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK + Y D+V D IK+ ++E I D+ K + K+ RN
Sbjct: 62 YMKVKEGGSNY---DVVVPSDYMAEKMIKQGMLEKI------DYSKIPNFKYIDQRFRN- 111
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ DP+ + + PY WGT+ I Y K+K ++ ++ W LW + I M+NS R+
Sbjct: 112 -LDYDPKNE-YTVPYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRD 165
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
+G LK +G S NS N+ +L+ A + Q++L L A L D T D +
Sbjct: 166 TLGVALKRLGYSMNSRNDAELEKAKQSLIKQKDLVL----AYLVDETKTQMVNEEAD--L 219
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI--PAASRLETKQIGGRVRGP--SP 263
AV +S D + + N+ V+PK G++LW D AI A ++ ++ + P +
Sbjct: 220 AVMYSGDAIVSKGENENLEYVIPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAK 279
Query: 264 LIHQWIEFCLQTARA 278
L ++I + L + +A
Sbjct: 280 LNAEYIGYSLPSTKA 294
>gi|420390323|ref|ZP_14889591.1| potF [Escherichia coli EPEC C342-62]
gi|391314647|gb|EIQ72197.1| potF [Escherichia coli EPEC C342-62]
Length = 353
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 63 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 115
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 116 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 175
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 176 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 231
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 232 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|419146898|ref|ZP_13691589.1| potF [Escherichia coli DEC6B]
gi|378000417|gb|EHV63488.1| potF [Escherichia coli DEC6B]
Length = 353
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 63 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 115
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 116 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 175
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 176 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 231
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 232 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|452970892|ref|ZP_21969119.1| putrescine/spermidine ABC transporter substrate-binding protein
[Escherichia coli O157:H7 str. EC4009]
Length = 353
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 63 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 115
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 116 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 175
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 176 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 231
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 232 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|300947056|ref|ZP_07161277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|300957057|ref|ZP_07169303.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|422770088|ref|ZP_16823779.1| extracellular solute-binding protein [Escherichia coli E482]
gi|300316197|gb|EFJ65981.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|300453295|gb|EFK16915.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|323942771|gb|EGB38936.1| extracellular solute-binding protein [Escherichia coli E482]
Length = 415
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 125 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 177
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 178 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 237
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 238 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 293
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 294 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 332
>gi|118443532|ref|YP_877312.1| extracellular solute-binding protein [Clostridium novyi NT]
gi|118133988|gb|ABK61032.1| Bacterial extracellular solute-binding protein, putative
[Clostridium novyi NT]
Length = 347
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ + ++ PY WGT+ I Y +K K N I+ W LW P+ G+I MV+S R+ I
Sbjct: 120 FDPKNQ-YSVPYMWGTVGIIYN-TKLIKDN---IDSWDALWNPKYKGQILMVDSQRDAIA 174
Query: 152 SVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK +G S N+ N +L+ A ++ Q+ L A + D L G +AV
Sbjct: 175 VALKKLGYSMNTTNKAELEKAKQELIKQKPLV----HAYVGDEVKDLMTDEEG--AIAVV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D + +K N+ V+PK G++LW D IP S+
Sbjct: 229 WSGDAVTMMKNNKNLRYVIPKEGSNLWFDNMVIPKGSK 266
>gi|328545139|ref|YP_004305248.1| ABC transporter polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
gi|326414881|gb|ADZ71944.1| ABC transporter, polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
Length = 362
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A Y WGT I Y K AP+ W ++ ++ + I ++++P
Sbjct: 118 DP-GNEYAINYMWGTTGIGYNVEKITAIMPDAPVGSWDMVFNKDIVSKFAECGIFVLDTP 176
Query: 147 REVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E+I + L Y+G +SN D++ AG + L + R F S+ Y+ A GD+
Sbjct: 177 EEMIPAALNYLGLDPDSNETGDIEKAG------ELLLSIRPHIRKFHSSEYINALANGDI 230
Query: 206 WVAVGWSSDVLPAVKRM----SNVAV--VVPKSGASLWADLWAIPAASR 248
+AVGWS D+L A R +NV V V+PK GA +W D AIPA +R
Sbjct: 231 CLAVGWSGDILQARDRAAEAGNNVTVEYVIPKEGALMWFDNMAIPADAR 279
>gi|300924463|ref|ZP_07140433.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|301325862|ref|ZP_07219295.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
gi|300419348|gb|EFK02659.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|300847376|gb|EFK75136.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
Length = 395
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|26246877|ref|NP_752917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CFT073]
gi|227884182|ref|ZP_04001987.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300993458|ref|ZP_07180400.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|301051218|ref|ZP_07198047.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|386628394|ref|YP_006148114.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|386633314|ref|YP_006153033.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
gi|422364764|ref|ZP_16445275.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|26107277|gb|AAN79460.1|AE016758_64 Putrescine-binding periplasmic protein precursor [Escherichia coli
CFT073]
gi|227838934|gb|EEJ49400.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300297125|gb|EFJ53510.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|300406572|gb|EFJ90110.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|315292529|gb|EFU51881.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|355419293|gb|AER83490.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|355424213|gb|AER88409.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
Length = 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 128 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 180
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 181 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 240
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 241 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 296
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 297 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 335
>gi|147334|gb|AAA24409.1| periplasmic putrescine binding protein [Escherichia coli]
Length = 370
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGK---ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G NS D ++V+ N+ R F S+ Y+ GD+ VA+GW+
Sbjct: 193 YLGKDPNSTKADDYTGPATDLLLNVRPNI-------RYFHSSQYINDLANGDICVAIGWA 245
Query: 213 SDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 246 GDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|300817047|ref|ZP_07097266.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332282252|ref|ZP_08394665.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|415880496|ref|ZP_11545169.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
gi|300530399|gb|EFK51461.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332104604|gb|EGJ07950.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|342926405|gb|EGU95127.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
Length = 395
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|431805015|ref|YP_007231918.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
gi|430795780|gb|AGA75975.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
Length = 364
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 139
L RND G +A PY WGT I Y K + + I+ W L+ PE +
Sbjct: 116 LERNDPGNQ------YAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLAK 169
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHY 196
++ ++S E++ +VL YMG NS N D Q A ++ L + F S+ Y
Sbjct: 170 CGVAFLDSADEMLPAVLNYMGLDPNSTNAKDYQAA------EKKLLAVRPYVTYFHSSKY 223
Query: 197 LKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ GD+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 224 ITDLANGDICVAAGFSGDVFQAKTRAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|422800217|ref|ZP_16848715.1| extracellular solute-binding protein [Escherichia coli M863]
gi|323967289|gb|EGB62712.1| extracellular solute-binding protein [Escherichia coli M863]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|429114895|ref|ZP_19175813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
gi|426318024|emb|CCK01926.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEILKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLKKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D +G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R N++ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|300902387|ref|ZP_07120370.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|301305374|ref|ZP_07211469.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|415860860|ref|ZP_11534575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
gi|300405534|gb|EFJ89072.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|300839392|gb|EFK67152.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|315257890|gb|EFU37858.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|432946095|ref|ZP_20141788.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|433042361|ref|ZP_20229883.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
gi|431462087|gb|ELH42305.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|431559359|gb|ELI32919.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKADDYTG----PATELLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|422765428|ref|ZP_16819155.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
gi|323937961|gb|EGB34223.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|301020628|ref|ZP_07184703.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
gi|300398604|gb|EFJ82142.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300823995|ref|ZP_07104117.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|300921116|ref|ZP_07137500.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|301646291|ref|ZP_07246182.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|331641375|ref|ZP_08342510.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331676642|ref|ZP_08377338.1| putrescine-binding periplasmic protein [Escherichia coli H591]
gi|422793872|ref|ZP_16846565.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|300411967|gb|EFJ95277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|300523506|gb|EFK44575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|301075494|gb|EFK90300.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|323969582|gb|EGB64870.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|331038173|gb|EGI10393.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331075331|gb|EGI46629.1| putrescine-binding periplasmic protein [Escherichia coli H591]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|209525279|ref|ZP_03273821.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|423065114|ref|ZP_17053904.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209494294|gb|EDZ94607.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|406713407|gb|EKD08577.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 363
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 39/249 (15%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPRE 148
+ DP ++ P WGT + Y R +P EDW+DLW + +L+ R++++N RE
Sbjct: 132 DYDP-NSTYSVPLSWGTTGLIYNS---RLLPNSP-EDWEDLWTYQDQLSRRLTLLNDVRE 186
Query: 149 VIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
V+G+ L+ +G SYNS N ++ A Q L L F + + +GD+ +
Sbjct: 187 VMGASLRRLGYSYNSTNPREINQA------YQELVKLRGAIASFTTDAWRPQMIVGDLLL 240
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IH 266
A+ +SSD + ++ + P SG+SLW D IP ++ P+P +
Sbjct: 241 AMCYSSDAAEVMPENEDLEYITPVSGSSLWIDTLVIPKSA-------------PNPEGAY 287
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
QWI F L+ A E + A+PS + +LP+EL +D L PP ++
Sbjct: 288 QWINFMLRPDIATQIV-ERLSFATPSLV--AYRQLPQEL-----REDPALF---PPESVI 336
Query: 327 ARCEFLEPL 335
A E + PL
Sbjct: 337 ANSETVSPL 345
>gi|77461625|ref|YP_351132.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77385628|gb|ABA77141.1| putrescine ABC transport system, substrate-binding periplasmic
protein precursor [Pseudomonas fluorescens Pf0-1]
Length = 375
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 131 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLHSCGVAFLDSA 189
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 190 DEMMPTVLNYMGLNANSTNPKDYEKATAK------LLAVRPYVTYFHSSKYIGDLANGDI 243
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 244 CVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 291
>gi|425421448|ref|ZP_18802655.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
gi|408347112|gb|EKJ61346.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|405379647|ref|ZP_11033495.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF142]
gi|397323895|gb|EJJ28285.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF142]
Length = 365
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 121/286 (42%), Gaps = 49/286 (17%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIE-- 126
D+ LS+ W + ++ DP G ++ Y WGT I Y K K L E
Sbjct: 99 DKSKLPNLSNMWDIVMKG--VATFDP-GNEYSVDYMWGTTGIGYNVDKV-KAALGTDEKP 154
Query: 127 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQN 180
+W L+ P A + I M++SP +VI SVL Y+G NS DL A Q+
Sbjct: 155 NWDALFDPAKAAKLKDCGIYMLDSPTDVIPSVLAYLGLDPNSKKPEDLNKA------QEV 208
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +A+G+S DV A R + NV VP GA
Sbjct: 209 LLAVRPFVRKFHSSEYISALANGDICIALGFSGDVFQARDRAAEAKAGVNVDYSVPSQGA 268
Query: 235 SLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 293
++ D++ IP A +E H++I + + K EV+ AS
Sbjct: 269 QIFFDVFGIPKDAPHVEEA-------------HEFINYMM--------KPEVVAKASNFV 307
Query: 294 LETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT 339
K ++ L DT + P EI+A+ + PL T
Sbjct: 308 FYANGNKASQQFLDKDVIDDTAIY---PTPEIMAKLFTVPPLDPKT 350
>gi|300901217|ref|ZP_07119319.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300939899|ref|ZP_07154534.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331672393|ref|ZP_08373184.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
gi|300355342|gb|EFJ71212.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300455281|gb|EFK18774.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331070588|gb|EGI41952.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|110804852|ref|YP_688372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Shigella flexneri 5 str. 8401]
gi|424837314|ref|ZP_18261951.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
gi|110614400|gb|ABF03067.1| Putrescine-binding periplasmic protein precursor [Shigella flexneri
5 str. 8401]
gi|383466366|gb|EID61387.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|309795351|ref|ZP_07689769.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
gi|308121001|gb|EFO58263.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|398859600|ref|ZP_10615273.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398236561|gb|EJN22339.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 362
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ +K + ++ +W K L K L +ND G + P
Sbjct: 74 DVVVPSNHFLARQVKAGAFLKLDRSQLPNW-KNLDPKLLALLEKNDPGNEH------SVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W + PE + +SM++S EV +VL Y
Sbjct: 127 YLWGTNGIGYNIDKVKQVLGIDRIDSWAVFFEPENLKKLSQCGVSMMDSADEVFPAVLNY 186
Query: 157 MGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
MG S N D + A K L + F S+ Y+ GD+ VA G+S DV
Sbjct: 187 MGMDPRSENPEDFKKAEAK------LLTIRPYITYFHSSKYVSDLANGDICVAFGYSGDV 240
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
A R N+A +PK G++LW DL AIPA
Sbjct: 241 FQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|330827832|ref|YP_004390784.1| spermidine/putrescine ABC transporter substrate-binding protein
[Aeromonas veronii B565]
gi|423211496|ref|ZP_17198029.1| hypothetical protein HMPREF1169_03547 [Aeromonas veronii AER397]
gi|328802968|gb|AEB48167.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Aeromonas veronii
B565]
gi|404613576|gb|EKB10597.1| hypothetical protein HMPREF1169_03547 [Aeromonas veronii AER397]
Length = 361
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++L+ IK + + D+ L++ V L++ D ++DP G +A P
Sbjct: 73 DLVVPSNNFLAKQIKAGAFQKL----DKSLLPNLANLDPVLLKQLD--KVDP-GHQYAVP 125
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W ++ PE ++S ++S E+I + L Y
Sbjct: 126 YLWGTNGIGYNVDKIKAVLGVDKIDSWATIFEPENMAKLSRCGVAFLDSADEMIPAALNY 185
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G NS+ A G I + L L + F S+ Y+ GD+ VA G+S D+
Sbjct: 186 LGLDPNSH------ATGDIKQAEALLLKVRPYVAYFHSSKYIGDLANGDICVAAGFSGDI 239
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--I 265
L A R +A +PK G +LW D+ AIP A + E + V P + +
Sbjct: 240 LQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPSDATNVKEAHALINYVLQPEVIAKV 299
Query: 266 HQWIEFCLQTARALPFKQEVI 286
++ + +RA F E +
Sbjct: 300 SDYVGYANPNSRAGEFMDEAV 320
>gi|422782310|ref|ZP_16835095.1| extracellular solute-binding protein [Escherichia coli TW10509]
gi|323976761|gb|EGB71849.1| extracellular solute-binding protein [Escherichia coli TW10509]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|406674913|ref|ZP_11082105.1| hypothetical protein HMPREF1170_00313 [Aeromonas veronii AMC35]
gi|404628421|gb|EKB25203.1| hypothetical protein HMPREF1170_00313 [Aeromonas veronii AMC35]
Length = 361
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++L+ IK + + D+ L++ V L++ D ++DP G +A P
Sbjct: 73 DLVVPSNNFLAKQIKAGAFQKL----DKSLLPNLANLDPVLLKQLD--KVDP-GHQYAVP 125
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W ++ PE ++S ++S E+I + L Y
Sbjct: 126 YLWGTNGIGYNVDKIKAVLGVDKIDSWATIFEPENMAKLSRCGVAFLDSADEMIPAALNY 185
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G NS+ A G I + L L + F S+ Y+ GD+ VA G+S D+
Sbjct: 186 LGLDPNSH------ATGDIKQAEALLLKVRPYVAYFHSSKYIGDLANGDICVAAGFSGDI 239
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--I 265
L A R +A +PK G +LW D+ AIP A + E + V P + +
Sbjct: 240 LQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPSDATNVKEAHALINYVLQPEVIAKV 299
Query: 266 HQWIEFCLQTARALPFKQEVI 286
++ + +RA F E +
Sbjct: 300 SDYVGYANPNSRAGEFMDEAV 320
>gi|70730318|ref|YP_260057.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
gi|68344617|gb|AAY92223.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
Length = 362
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 119/278 (42%), Gaps = 42/278 (15%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ +K + ++ +W K L K L +ND G ++ P
Sbjct: 74 DVVVPSNHFLARQVKAGAFLKLDRSQLPNW-KNLDPKLLALLEQNDPGNQ------YSVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W L P + +SM++SP EV +VL Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGIDHIDSWAVLLEPANLKKLQQCGVSMMDSPDEVFPAVLNY 186
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G S N D + A K L L F S+ Y+ GD+ +A G+S DV
Sbjct: 187 LGLDPRSENPEDYKKAEAK------LLTLRPYITYFHSSKYVSDLANGDICIAFGYSGDV 240
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
A R N+A +PK G++LW DL AIPA + G V+ H +I
Sbjct: 241 FQAANRAREAKNGVNIAYSIPKEGSNLWFDLLAIPADA--------GNVKE----AHAFI 288
Query: 270 EFCLQ---TARALPFKQEVIPG-ASPSALETTLVKLPE 303
+ L A+ + P AS +E LV PE
Sbjct: 289 NYLLDPQVIAKVSAYVGYANPNPASQQYMEADLVNNPE 326
>gi|55823439|ref|YP_141880.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus thermophilus CNRZ1066]
gi|55739424|gb|AAV63065.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus thermophilus CNRZ1066]
Length = 356
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 36/230 (15%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ PY WGT+ I Y +K AP + W DLW PE +I MV+ REVIG
Sbjct: 126 FDPN-KDYSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIG 180
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G S N+ N+ +L++A K+ S+ N+ A++ ++ +K + I GD +
Sbjct: 181 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDE---------MKGYMIQGDAAI 231
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
V +S + + + ++ VVP G++LW D IP + E + +
Sbjct: 232 GVTFSGEASEMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YA 279
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQDT 314
+I F L+ A E I A+P+ TL LP+ + K PS+ T
Sbjct: 280 FINFMLKPENAAQ-NAEYIGYATPNEAAKTL--LPKSITNDKAFYPSEST 326
>gi|421529430|ref|ZP_15975965.1| extracellular solute-binding protein [Pseudomonas putida S11]
gi|402213158|gb|EJT84520.1| extracellular solute-binding protein [Pseudomonas putida S11]
Length = 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR--- 139
L RND G +A PY WGT I Y K + + I+ W L+ PE +
Sbjct: 40 LERNDPGNQ------YAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLAK 93
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHY 196
++ ++S E++ +VL YMG NS N D Q A ++ L + F S+ Y
Sbjct: 94 CGVAFLDSADEMLPAVLNYMGLDPNSTNAKDYQAA------EKKLLAVRPYVTYFHSSKY 147
Query: 197 LKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ GD+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 148 ITDLANGDICVAAGFSGDVFQAKTRAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 205
>gi|296103163|ref|YP_003613309.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057622|gb|ADF62360.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 30/262 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVSKH------DPENK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y W T I Y K K L P ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKV-KAALGPDVKLDSWDVVLKPENLAKLKSCGVSFLDAPEEIFATVL 191
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NSN D G + L L R F S+ Y+ GD+ VA+GW+ D
Sbjct: 192 NYLGKDPNSNKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGD 247
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
V A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 248 VWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAH 307
Query: 267 --QWIEFCLQTARALPFKQEVI 286
+ + +LP E I
Sbjct: 308 ISDHVYYANGNKASLPLISEEI 329
>gi|170682561|ref|YP_001742962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SMS-3-5]
gi|218699230|ref|YP_002406859.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI39]
gi|222155578|ref|YP_002555717.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|386623257|ref|YP_006142985.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O7:K1 str. CE10]
gi|387616110|ref|YP_006119132.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|170520279|gb|ACB18457.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli SMS-3-5]
gi|218369216|emb|CAR16971.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI39]
gi|222032583|emb|CAP75322.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|312945371|gb|ADR26198.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O83:H1 str. NRG 857C]
gi|349736995|gb|AEQ11701.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O7:K1 str. CE10]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417230223|ref|ZP_12031809.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
gi|386206713|gb|EII11219.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|331651869|ref|ZP_08352888.1| putrescine-binding periplasmic protein [Escherichia coli M718]
gi|331050147|gb|EGI22205.1| putrescine-binding periplasmic protein [Escherichia coli M718]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 207
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P EV +VL Y+G NS D G + L L R F S+ Y+ GD+
Sbjct: 208 PEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDI 263
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 264 CVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|384542392|ref|YP_005726454.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
gi|281600177|gb|ADA73161.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|157157062|ref|YP_001462051.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli E24377A]
gi|307311758|ref|ZP_07591398.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|378713742|ref|YP_005278635.1| extracellular solute-binding protein [Escherichia coli KO11FL]
gi|386608222|ref|YP_006123708.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|386702331|ref|YP_006166168.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli KO11FL]
gi|386708666|ref|YP_006172387.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|417161332|ref|ZP_11997568.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|419369124|ref|ZP_13910250.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|419928713|ref|ZP_14446420.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|422959017|ref|ZP_16970948.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|432764176|ref|ZP_19998624.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|450212610|ref|ZP_21894582.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
gi|157079092|gb|ABV18800.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E24377A]
gi|306908313|gb|EFN38812.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|315060139|gb|ADT74466.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|323379303|gb|ADX51571.1| extracellular solute-binding protein family 1 [Escherichia coli
KO11FL]
gi|371595673|gb|EHN84521.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|378220799|gb|EHX81050.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|383393858|gb|AFH18816.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KO11FL]
gi|383404358|gb|AFH10601.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|386173868|gb|EIH45869.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|388405079|gb|EIL65516.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|431312755|gb|ELG00744.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|449321719|gb|EMD11729.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432977512|ref|ZP_20166335.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|433086463|ref|ZP_20272858.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
gi|431481023|gb|ELH60737.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|431609120|gb|ELI78453.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|386613073|ref|YP_006132739.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
gi|332342242|gb|AEE55576.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|301027634|ref|ZP_07190954.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
gi|299879236|gb|EFI87447.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|152969442|ref|YP_001334551.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577099|ref|YP_002239497.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae 342]
gi|288936345|ref|YP_003440404.1| family 1 extracellular solute-binding protein [Klebsiella variicola
At-22]
gi|290510599|ref|ZP_06549969.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|329999807|ref|ZP_08303535.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|378977921|ref|YP_005226062.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|402781600|ref|YP_006637146.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419762541|ref|ZP_14288788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|419971965|ref|ZP_14487395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978771|ref|ZP_14494066.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985544|ref|ZP_14500684.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992759|ref|ZP_14507711.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995076|ref|ZP_14509884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003546|ref|ZP_14518191.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009197|ref|ZP_14523682.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016570|ref|ZP_14530860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021885|ref|ZP_14536060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420025169|ref|ZP_14539179.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420032279|ref|ZP_14546095.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420039041|ref|ZP_14552681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420043699|ref|ZP_14557185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050082|ref|ZP_14563385.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056222|ref|ZP_14569381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420061218|ref|ZP_14574209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067945|ref|ZP_14580732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072702|ref|ZP_14585337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420077640|ref|ZP_14590104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083426|ref|ZP_14595708.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909288|ref|ZP_16339108.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421915899|ref|ZP_16345491.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424934273|ref|ZP_18352645.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|425077462|ref|ZP_18480565.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425088095|ref|ZP_18491188.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425090758|ref|ZP_18493843.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428150839|ref|ZP_18998595.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428941619|ref|ZP_19014657.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|449057000|ref|ZP_21735513.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
gi|150954291|gb|ABR76321.1| periplasmic putrescine-binding protein; permease protein
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|206566157|gb|ACI07933.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae 342]
gi|288891054|gb|ADC59372.1| extracellular solute-binding protein family 1 [Klebsiella variicola
At-22]
gi|289777315|gb|EFD85313.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|328538204|gb|EGF64354.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|364517332|gb|AEW60460.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397351214|gb|EJJ44299.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397351358|gb|EJJ44442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397352903|gb|EJJ45981.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397360172|gb|EJJ52854.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397368849|gb|EJJ61454.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397369366|gb|EJJ61967.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374739|gb|EJJ67059.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397381977|gb|EJJ74142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385957|gb|EJJ78044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397397726|gb|EJJ89398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397398046|gb|EJJ89712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403619|gb|EJJ95176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397412009|gb|EJK03253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397413505|gb|EJK04718.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420859|gb|EJK11906.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427266|gb|EJK18047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397431278|gb|EJK21955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438769|gb|EJK29249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397445829|gb|EJK36062.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451255|gb|EJK41343.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|397744722|gb|EJK91933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|402542476|gb|AFQ66625.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405593171|gb|EKB66623.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405602227|gb|EKB75369.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405613736|gb|EKB86465.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407808460|gb|EKF79711.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|410116845|emb|CCM81733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410121811|emb|CCM88116.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426300139|gb|EKV62438.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|427539108|emb|CCM94733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448875441|gb|EMB10458.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPENK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|194428217|ref|ZP_03060760.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|415803209|ref|ZP_11500357.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|417622217|ref|ZP_12272541.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|419310481|ref|ZP_13852352.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|419315769|ref|ZP_13857593.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|419321715|ref|ZP_13863447.1| potF [Escherichia coli DEC12B]
gi|419327845|ref|ZP_13869473.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|419333369|ref|ZP_13874924.1| potF [Escherichia coli DEC12D]
gi|419338686|ref|ZP_13880171.1| potF [Escherichia coli DEC12E]
gi|194413777|gb|EDX30056.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|323159676|gb|EFZ45655.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|345385041|gb|EGX14891.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|378160196|gb|EHX21193.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|378173150|gb|EHX33994.1| potF [Escherichia coli DEC12B]
gi|378173861|gb|EHX34694.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|378175304|gb|EHX36122.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|378188605|gb|EHX49201.1| potF [Escherichia coli DEC12D]
gi|378193209|gb|EHX53750.1| potF [Escherichia coli DEC12E]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|414082499|ref|YP_006991199.1| bacterial extracellular solute-binding family protein
[Carnobacterium maltaromaticum LMA28]
gi|412996075|emb|CCO09884.1| bacterial extracellular solute-binding family protein
[Carnobacterium maltaromaticum LMA28]
Length = 357
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 6 KRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIA 65
K+ + + N S + +N ++ F K+K Y DL + + IK+ ++ P+
Sbjct: 52 KKFEKETNYKVSYETFDSNEAM-FTKIKQGGTAY---DLTIPSEYMIQKMIKEEMLIPL- 106
Query: 66 GAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPI 125
D+ K L + +L + D K ++ PY WGT+ I Y KF K +
Sbjct: 107 ---DKSKIKGLENIDSSFLDL----DFDLNNK-FSIPYFWGTLGIIYN-DKFVKE--EEM 155
Query: 126 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS-VQQNL-A 182
+ W DLW P+LA + +++ REVIG L +G S NS N+ L A K+S + N+ A
Sbjct: 156 QHWDDLWNPKLANNVMLIDGAREVIGLSLNSLGYSLNSKNMQQLTAASDKLSTLTPNVKA 215
Query: 183 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 242
++A++ +++ + VAV +S + + ++ V+P G++LW D +
Sbjct: 216 IVADEIKMYMVQE--------ESAVAVTFSGEASEMLDNNEHLHYVIPSEGSNLWFDNFV 267
Query: 243 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 302
IP ++ K+ + +I F L+ A E I ++P+ + + LP
Sbjct: 268 IPKTAK--NKEAA----------YAFINFMLEPKNAAQ-NAEYIGYSTPN--KAAMAYLP 312
Query: 303 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 351
+EL++ + P E ++ E E L L+ Y L + +
Sbjct: 313 KELVEDEQF--------YPSDETMSHLEVYEDLGAKYLAIYNDLFLEFK 353
>gi|300929337|ref|ZP_07144810.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|422785446|ref|ZP_16838185.1| extracellular solute-binding protein [Escherichia coli H489]
gi|300462683|gb|EFK26176.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|323962967|gb|EGB58539.1| extracellular solute-binding protein [Escherichia coli H489]
Length = 395
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 105 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 157
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 158 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 217
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 218 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 273
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 274 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|420330059|ref|ZP_14831756.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
gi|391258105|gb|EIQ17211.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
Length = 289
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 43 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 101
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P EV +VL Y+G NS D G + L L R F S+ Y+ GD+
Sbjct: 102 PEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDI 157
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 158 CVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 206
>gi|291281853|ref|YP_003498671.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O55:H7 str. CB9615]
gi|290761726|gb|ADD55687.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O55:H7 str. CB9615]
Length = 420
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 130 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 182
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 183 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 242
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 243 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 298
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 299 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 337
>gi|260854146|ref|YP_003228037.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. 11368]
gi|415785124|ref|ZP_11492761.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|417295212|ref|ZP_12082468.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|419208005|ref|ZP_13751128.1| potF [Escherichia coli DEC8C]
gi|419214551|ref|ZP_13757573.1| potF [Escherichia coli DEC8D]
gi|419220151|ref|ZP_13763103.1| potF [Escherichia coli DEC8E]
gi|419225642|ref|ZP_13768525.1| potF [Escherichia coli DEC9A]
gi|419231629|ref|ZP_13774417.1| potF [Escherichia coli DEC9B]
gi|419236828|ref|ZP_13779571.1| potF [Escherichia coli DEC9C]
gi|419242358|ref|ZP_13785005.1| potF [Escherichia coli DEC9D]
gi|419247875|ref|ZP_13790482.1| potF [Escherichia coli DEC9E]
gi|419253613|ref|ZP_13796152.1| potF [Escherichia coli DEC10A]
gi|419259675|ref|ZP_13802119.1| potF [Escherichia coli DEC10B]
gi|419265753|ref|ZP_13808134.1| potF [Escherichia coli DEC10C]
gi|419271357|ref|ZP_13813681.1| potF [Escherichia coli DEC10D]
gi|419282843|ref|ZP_13825054.1| potF [Escherichia coli DEC10F]
gi|419874556|ref|ZP_14396479.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|419885475|ref|ZP_14406218.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|419902683|ref|ZP_14421875.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|419909554|ref|ZP_14428111.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|420105546|ref|ZP_14616016.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|420111561|ref|ZP_14621389.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|420117654|ref|ZP_14627009.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|420124077|ref|ZP_14632947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|420129649|ref|ZP_14638175.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|420133082|ref|ZP_14641352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|424747221|ref|ZP_18175418.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424755887|ref|ZP_18183731.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425377764|ref|ZP_18762130.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|257752795|dbj|BAI24297.1| putrescine transporter subunit PotF [Escherichia coli O26:H11 str.
11368]
gi|323155772|gb|EFZ41941.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|378061179|gb|EHW23365.1| potF [Escherichia coli DEC8C]
gi|378066804|gb|EHW28932.1| potF [Escherichia coli DEC8D]
gi|378071385|gb|EHW33455.1| potF [Escherichia coli DEC8E]
gi|378080011|gb|EHW41977.1| potF [Escherichia coli DEC9A]
gi|378081347|gb|EHW43302.1| potF [Escherichia coli DEC9B]
gi|378087691|gb|EHW49547.1| potF [Escherichia coli DEC9C]
gi|378093709|gb|EHW55513.1| potF [Escherichia coli DEC9D]
gi|378100040|gb|EHW61737.1| potF [Escherichia coli DEC9E]
gi|378105153|gb|EHW66800.1| potF [Escherichia coli DEC10A]
gi|378114455|gb|EHW76011.1| potF [Escherichia coli DEC10B]
gi|378117332|gb|EHW78848.1| potF [Escherichia coli DEC10C]
gi|378120888|gb|EHW82350.1| potF [Escherichia coli DEC10D]
gi|378138045|gb|EHW99306.1| potF [Escherichia coli DEC10F]
gi|386261575|gb|EIJ17040.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|388349802|gb|EIL15254.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|388350747|gb|EIL16075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|388372924|gb|EIL36301.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|388373469|gb|EIL36739.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|394381956|gb|EJE59609.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|394395831|gb|EJE72224.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|394398150|gb|EJE74350.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|394401884|gb|EJE77653.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|394415718|gb|EJE89562.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|394426734|gb|EJE99527.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|408308734|gb|EKJ25967.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|421946651|gb|EKU03767.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949939|gb|EKU06844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|188496410|ref|ZP_03003680.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
gi|188491609|gb|EDU66712.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
Length = 420
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 130 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 182
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 183 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 242
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 243 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 298
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 299 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 337
>gi|110641056|ref|YP_668786.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 536]
gi|191172122|ref|ZP_03033666.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|191173739|ref|ZP_03035262.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215485985|ref|YP_002328416.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O127:H6 str. E2348/69]
gi|218557758|ref|YP_002390671.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli S88]
gi|218688637|ref|YP_002396849.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ED1a]
gi|306812697|ref|ZP_07446890.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|312969079|ref|ZP_07783286.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|331656926|ref|ZP_08357888.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|386598572|ref|YP_006100078.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|386605253|ref|YP_006111553.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UM146]
gi|387828832|ref|YP_003348769.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|416335114|ref|ZP_11671825.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|417083350|ref|ZP_11951445.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|417288918|ref|ZP_12076203.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|417661418|ref|ZP_12310999.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|417754753|ref|ZP_12402844.1| potF [Escherichia coli DEC2B]
gi|418996071|ref|ZP_13543678.1| potF [Escherichia coli DEC1A]
gi|419001120|ref|ZP_13548671.1| potF [Escherichia coli DEC1B]
gi|419006610|ref|ZP_13554063.1| potF [Escherichia coli DEC1C]
gi|419012454|ref|ZP_13559818.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|419017452|ref|ZP_13564771.1| potF [Escherichia coli DEC1E]
gi|419023044|ref|ZP_13570285.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|419027912|ref|ZP_13575104.1| potF [Escherichia coli DEC2C]
gi|419033667|ref|ZP_13580763.1| potF [Escherichia coli DEC2D]
gi|419038720|ref|ZP_13585773.1| potF [Escherichia coli DEC2E]
gi|419699706|ref|ZP_14227318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|419911703|ref|ZP_14430172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|422748099|ref|ZP_16802012.1| extracellular solute-binding protein [Escherichia coli H252]
gi|422753460|ref|ZP_16807287.1| extracellular solute-binding protein [Escherichia coli H263]
gi|422839317|ref|ZP_16887289.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|425299119|ref|ZP_18689161.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|432357183|ref|ZP_19600427.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|432361610|ref|ZP_19604794.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|432380477|ref|ZP_19623432.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|432386304|ref|ZP_19629200.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|432396738|ref|ZP_19639523.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|432405670|ref|ZP_19648390.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|432440215|ref|ZP_19682567.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|432445345|ref|ZP_19687651.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|432470222|ref|ZP_19712274.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|432499066|ref|ZP_19740842.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|432513092|ref|ZP_19750327.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|432572832|ref|ZP_19809322.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|432587092|ref|ZP_19823462.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|432596733|ref|ZP_19833014.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|432610523|ref|ZP_19846694.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|432645281|ref|ZP_19881080.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|432655119|ref|ZP_19890831.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|432693606|ref|ZP_19928817.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|432698204|ref|ZP_19933370.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|432712512|ref|ZP_19947561.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|432722365|ref|ZP_19957288.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|432726953|ref|ZP_19961834.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|432731563|ref|ZP_19966399.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|432740639|ref|ZP_19975360.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|432744824|ref|ZP_19979523.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|432753591|ref|ZP_19988157.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|432758641|ref|ZP_19993141.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|432777731|ref|ZP_20011981.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|432786519|ref|ZP_20020684.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|432820111|ref|ZP_20053824.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|432826327|ref|ZP_20059982.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|432893590|ref|ZP_20105602.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|432897785|ref|ZP_20108616.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|432903437|ref|ZP_20112903.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|432918076|ref|ZP_20122481.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|432925366|ref|ZP_20127395.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|432942903|ref|ZP_20140057.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|432971009|ref|ZP_20159887.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|432980327|ref|ZP_20169105.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|432984481|ref|ZP_20173218.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|432989952|ref|ZP_20178618.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|433004319|ref|ZP_20192757.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|433011574|ref|ZP_20199978.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|433013071|ref|ZP_20201446.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|433022713|ref|ZP_20210725.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|433027879|ref|ZP_20215751.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|433037892|ref|ZP_20225504.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|433077013|ref|ZP_20263575.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|433081779|ref|ZP_20268253.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|433095749|ref|ZP_20281960.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|433100363|ref|ZP_20286470.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|433104959|ref|ZP_20290977.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|433110174|ref|ZP_20296048.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|433143474|ref|ZP_20328640.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|433152944|ref|ZP_20337910.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|433162689|ref|ZP_20347448.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|433167698|ref|ZP_20352364.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|433187638|ref|ZP_20371755.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|433197462|ref|ZP_20381383.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|433322318|ref|ZP_20399788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
gi|110342648|gb|ABG68885.1| putrescine-binding periplasmic protein precursor [Escherichia coli
536]
gi|190905989|gb|EDV65605.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|190907649|gb|EDV67244.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215264057|emb|CAS08399.1| putrescine transporter subunit PotF: periplasmic-binding component
of ABC superfamily [Escherichia coli O127:H6 str.
E2348/69]
gi|218364527|emb|CAR02209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S88]
gi|218426201|emb|CAR07023.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli ED1a]
gi|281177989|dbj|BAI54319.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|294491889|gb|ADE90645.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|305853460|gb|EFM53899.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|307627737|gb|ADN72041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UM146]
gi|312286481|gb|EFR14394.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|320196651|gb|EFW71274.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|323953442|gb|EGB49308.1| extracellular solute-binding protein [Escherichia coli H252]
gi|323958143|gb|EGB53852.1| extracellular solute-binding protein [Escherichia coli H263]
gi|330910636|gb|EGH39146.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|331055174|gb|EGI27183.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|355352766|gb|EHG01940.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|371609849|gb|EHN98382.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|377848061|gb|EHU13058.1| potF [Escherichia coli DEC1A]
gi|377849686|gb|EHU14655.1| potF [Escherichia coli DEC1C]
gi|377852468|gb|EHU17387.1| potF [Escherichia coli DEC1B]
gi|377862077|gb|EHU26891.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|377865908|gb|EHU30698.1| potF [Escherichia coli DEC1E]
gi|377868054|gb|EHU32803.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|377878196|gb|EHU42784.1| potF [Escherichia coli DEC2B]
gi|377882844|gb|EHU47375.1| potF [Escherichia coli DEC2D]
gi|377884039|gb|EHU48556.1| potF [Escherichia coli DEC2C]
gi|377897181|gb|EHU61564.1| potF [Escherichia coli DEC2E]
gi|380348812|gb|EIA37088.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|386247710|gb|EII93883.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|388393013|gb|EIL54407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|408221062|gb|EKI45045.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|430879049|gb|ELC02406.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|430889500|gb|ELC12161.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|430909225|gb|ELC30610.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|430910792|gb|ELC32092.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|430917058|gb|ELC38106.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|430931824|gb|ELC52258.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|430968941|gb|ELC86109.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|430975187|gb|ELC92089.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|430999400|gb|ELD15482.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|431031737|gb|ELD44475.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|431044131|gb|ELD54411.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|431110040|gb|ELE13967.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|431123259|gb|ELE26001.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|431132518|gb|ELE34517.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|431150864|gb|ELE51906.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|431182512|gb|ELE82329.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|431194029|gb|ELE93299.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|431236272|gb|ELF31485.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|431246344|gb|ELF40610.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|431258645|gb|ELF51408.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|431267442|gb|ELF58959.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|431274741|gb|ELF65786.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|431277818|gb|ELF68822.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|431285230|gb|ELF76066.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|431294300|gb|ELF84480.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|431304827|gb|ELF93351.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|431310580|gb|ELF98761.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|431329920|gb|ELG17205.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|431341155|gb|ELG28169.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|431370367|gb|ELG56168.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|431374111|gb|ELG59706.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|431424570|gb|ELH06666.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|431428512|gb|ELH10453.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|431435881|gb|ELH17489.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|431446257|gb|ELH27006.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|431448087|gb|ELH28805.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|431452790|gb|ELH33201.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|431486146|gb|ELH65803.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|431493222|gb|ELH72816.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|431496827|gb|ELH76405.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|431505060|gb|ELH83683.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|431517640|gb|ELH95162.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|431518189|gb|ELH95709.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|431534519|gb|ELI11001.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|431539450|gb|ELI15201.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|431545260|gb|ELI19920.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|431554062|gb|ELI27944.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|431600291|gb|ELI69963.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|431605614|gb|ELI75003.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|431619007|gb|ELI87935.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|431621820|gb|ELI90610.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|431630810|gb|ELI99138.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|431633715|gb|ELJ01978.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|431665576|gb|ELJ32294.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|431678037|gb|ELJ44049.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|431691359|gb|ELJ56819.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|431692960|gb|ELJ58381.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|431708638|gb|ELJ73146.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|431724536|gb|ELJ88453.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|432349036|gb|ELL43477.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|156934649|ref|YP_001438565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii ATCC BAA-894]
gi|156532903|gb|ABU77729.1| hypothetical protein ESA_02483 [Cronobacter sakazakii ATCC BAA-894]
Length = 393
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 103 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEILKLVAKH------DPDNK-YAMP 155
Query: 103 YRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 156 YLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 215
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D +G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 216 YLGKDPNSSKAD-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 271
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R N++ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 272 WQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 330
>gi|432801133|ref|ZP_20035118.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
gi|431350368|gb|ELG37180.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEGKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432579551|ref|ZP_19815982.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
gi|431107541|gb|ELE11706.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|387611396|ref|YP_006114512.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404374179|ref|ZP_10979398.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|432368912|ref|ZP_19612013.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|432484548|ref|ZP_19726468.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|432669800|ref|ZP_19905340.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|432880589|ref|ZP_20097124.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|433172684|ref|ZP_20357237.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
gi|309701132|emb|CBJ00430.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404292237|gb|EJZ49066.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|430888124|gb|ELC10847.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|431017699|gb|ELD31154.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|431212330|gb|ELF10257.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|431412817|gb|ELG95616.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|431695675|gb|ELJ60977.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|218553440|ref|YP_002386353.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI1]
gi|417130876|ref|ZP_11976147.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|419806824|ref|ZP_14331914.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|419952129|ref|ZP_14468305.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|432749336|ref|ZP_19983948.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|432804981|ref|ZP_20038922.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|432933420|ref|ZP_20133088.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|432966952|ref|ZP_20155868.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|433192847|ref|ZP_20376859.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
gi|218360208|emb|CAQ97758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI1]
gi|384470184|gb|EIE54305.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|386153984|gb|EIH05265.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|388413096|gb|EIL73112.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|431298626|gb|ELF88250.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|431356593|gb|ELG43283.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|431455062|gb|ELH35418.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|431472924|gb|ELH52758.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|431720070|gb|ELJ84105.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|150395537|ref|YP_001326004.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
gi|150027052|gb|ABR59169.1| extracellular solute-binding protein family 1 [Sinorhizobium
medicae WSM419]
Length = 364
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 26/185 (14%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIE--DWKDLWR 133
LS+ W + + R + DP G +A Y WGT I Y K K L E +W ++
Sbjct: 105 LSNMWDMVMERT--AQYDP-GNEYAVDYMWGTTGIGYNVDKM-KEILGTDEKPNWDVIFD 160
Query: 134 PELAGR-----ISMVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKI-SVQQNLALLAN 186
PE++ + I +++SP +++ S L Y+G + +S+ DL+ A + V+ N+
Sbjct: 161 PEISAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHEQADLEKAADLLMKVRPNI----- 215
Query: 187 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM--SNVAVVV----PKSGASLWADL 240
R F S+ Y+ A GD+ +AVG+S D+ A R +N V V P+ GA +W D+
Sbjct: 216 --RKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEANAGVTVDYSIPEQGAQMWFDM 273
Query: 241 WAIPA 245
AIPA
Sbjct: 274 LAIPA 278
>gi|16128822|ref|NP_415375.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|82543342|ref|YP_407289.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii Sb227]
gi|170080513|ref|YP_001729833.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187731226|ref|YP_001880949.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii CDC 3083-94]
gi|218694328|ref|YP_002401995.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 55989]
gi|238900113|ref|YP_002925909.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BW2952]
gi|293433152|ref|ZP_06661580.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|331667228|ref|ZP_08368093.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|386279901|ref|ZP_10057574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386596310|ref|YP_006092710.1| extracellular solute-binding protein [Escherichia coli DH1]
gi|387620580|ref|YP_006128207.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|388476939|ref|YP_489127.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
W3110]
gi|407468328|ref|YP_006785230.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|407482940|ref|YP_006780089.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2011C-3493]
gi|410483492|ref|YP_006771038.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|415812750|ref|ZP_11504845.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|415827641|ref|ZP_11514466.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|416267761|ref|ZP_11641934.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|416304941|ref|ZP_11654096.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|416345141|ref|ZP_11678784.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|417224560|ref|ZP_12027851.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|417241354|ref|ZP_12037300.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|417262034|ref|ZP_12049522.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|417268341|ref|ZP_12055702.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|417274279|ref|ZP_12061619.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|417277787|ref|ZP_12065108.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|417290075|ref|ZP_12077358.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|417607078|ref|ZP_12257597.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|417611949|ref|ZP_12262421.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|417617293|ref|ZP_12267723.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|417633487|ref|ZP_12283706.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|417681255|ref|ZP_12330633.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|417804235|ref|ZP_12451266.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|417831986|ref|ZP_12478506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|417864139|ref|ZP_12509186.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|417943847|ref|ZP_12587093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|417975178|ref|ZP_12615978.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|418042980|ref|ZP_12681161.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|418301780|ref|ZP_12913574.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|418958811|ref|ZP_13510721.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|419141372|ref|ZP_13686126.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|419152772|ref|ZP_13697355.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|419158187|ref|ZP_13702704.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|419163121|ref|ZP_13707597.1| potF [Escherichia coli DEC6E]
gi|419174361|ref|ZP_13718213.1| potF [Escherichia coli DEC7B]
gi|419277125|ref|ZP_13819386.1| potF [Escherichia coli DEC10E]
gi|419344479|ref|ZP_13885861.1| potF [Escherichia coli DEC13A]
gi|419348918|ref|ZP_13890271.1| potF [Escherichia coli DEC13B]
gi|419353906|ref|ZP_13895188.1| potF [Escherichia coli DEC13C]
gi|419359301|ref|ZP_13900526.1| potF [Escherichia coli DEC13D]
gi|419364270|ref|ZP_13905448.1| potF [Escherichia coli DEC13E]
gi|419374613|ref|ZP_13915661.1| potF [Escherichia coli DEC14B]
gi|419379848|ref|ZP_13920820.1| potF [Escherichia coli DEC14C]
gi|419385250|ref|ZP_13926138.1| potF [Escherichia coli DEC14D]
gi|419390310|ref|ZP_13931144.1| potF [Escherichia coli DEC15A]
gi|419400824|ref|ZP_13941555.1| potF [Escherichia coli DEC15C]
gi|419406035|ref|ZP_13946734.1| potF [Escherichia coli DEC15D]
gi|419411498|ref|ZP_13952166.1| potF [Escherichia coli DEC15E]
gi|419809532|ref|ZP_14334417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|419925739|ref|ZP_14443568.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|419940973|ref|ZP_14457687.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|420324628|ref|ZP_14826408.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|420353441|ref|ZP_14854558.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|421681582|ref|ZP_16121408.1| potF [Shigella flexneri 1485-80]
gi|422819882|ref|ZP_16868092.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|422991589|ref|ZP_16982360.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|422993531|ref|ZP_16984295.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|422998742|ref|ZP_16989498.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|423007203|ref|ZP_16997946.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|423008849|ref|ZP_16999587.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|423023037|ref|ZP_17013740.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|423028189|ref|ZP_17018882.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|423034023|ref|ZP_17024707.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|423036889|ref|ZP_17027563.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423042008|ref|ZP_17032675.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423048698|ref|ZP_17039355.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423052280|ref|ZP_17041088.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423059246|ref|ZP_17048042.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423701702|ref|ZP_17676161.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|423708776|ref|ZP_17683154.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|425114214|ref|ZP_18516035.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|425118923|ref|ZP_18520645.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|425271605|ref|ZP_18663100.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|425282258|ref|ZP_18673363.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|429723080|ref|ZP_19257969.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429775254|ref|ZP_19307252.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429780443|ref|ZP_19312392.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429784494|ref|ZP_19316403.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429789831|ref|ZP_19321703.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429796061|ref|ZP_19327884.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429801986|ref|ZP_19333761.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429805618|ref|ZP_19337362.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429811214|ref|ZP_19342913.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429816565|ref|ZP_19348221.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429821773|ref|ZP_19353385.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429907442|ref|ZP_19373410.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429911643|ref|ZP_19377599.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|429917478|ref|ZP_19383418.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429922516|ref|ZP_19388437.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429923369|ref|ZP_19389285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429932264|ref|ZP_19398158.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429933866|ref|ZP_19399756.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429939525|ref|ZP_19405399.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429947167|ref|ZP_19413022.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429949799|ref|ZP_19415647.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429958077|ref|ZP_19423906.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|432375966|ref|ZP_19618974.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|432415841|ref|ZP_19658465.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|432480228|ref|ZP_19722190.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|432533080|ref|ZP_19770071.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|432562836|ref|ZP_19799456.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|432626460|ref|ZP_19862441.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|432636127|ref|ZP_19872009.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|432660081|ref|ZP_19895731.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|432684658|ref|ZP_19919970.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|432690779|ref|ZP_19926018.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|432703423|ref|ZP_19938542.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|432736354|ref|ZP_19971125.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|432812956|ref|ZP_20046801.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|432833936|ref|ZP_20067478.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|432954154|ref|ZP_20146273.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|433046991|ref|ZP_20234401.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|442593231|ref|ZP_21011185.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|450240880|ref|ZP_21899436.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
gi|2507606|sp|P31133.3|POTF_ECOLI RecName: Full=Putrescine-binding periplasmic protein; Flags:
Precursor
gi|1651387|dbj|BAA35565.1| putrescine transporter subunit [Escherichia coli str. K12 substr.
W3110]
gi|1787078|gb|AAC73941.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|81244753|gb|ABB65461.1| periplasmic putrescine-binding protein [Shigella boydii Sb227]
gi|169888348|gb|ACB02055.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
DH10B]
gi|187428218|gb|ACD07492.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella boydii CDC 3083-94]
gi|218351060|emb|CAU96764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 55989]
gi|238863342|gb|ACR65340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BW2952]
gi|260449999|gb|ACX40421.1| extracellular solute-binding protein family 1 [Escherichia coli
DH1]
gi|291323971|gb|EFE63393.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|315135503|dbj|BAJ42662.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|320175294|gb|EFW50400.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|320183206|gb|EFW58064.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|320199089|gb|EFW73686.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|323172180|gb|EFZ57818.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|323185182|gb|EFZ70547.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|331065584|gb|EGI37477.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|332097188|gb|EGJ02171.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|339413878|gb|AEJ55550.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|340735276|gb|EGR64334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|340741099|gb|EGR75249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|341917428|gb|EGT67044.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|342364333|gb|EGU28434.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|344195169|gb|EGV49239.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|345363669|gb|EGW95810.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|345365298|gb|EGW97407.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|345380465|gb|EGX12364.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|345390201|gb|EGX20000.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|354856591|gb|EHF17049.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|354857838|gb|EHF18291.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|354864606|gb|EHF25035.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|354874919|gb|EHF35285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|354878879|gb|EHF39226.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|354882671|gb|EHF42993.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|354884293|gb|EHF44606.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|354887350|gb|EHF47625.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|354900545|gb|EHF60679.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354903690|gb|EHF63790.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354906053|gb|EHF66135.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354916970|gb|EHF76940.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354921031|gb|EHF80956.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|359331546|dbj|BAL37993.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
MDS42]
gi|377998987|gb|EHV62074.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|378002122|gb|EHV65175.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|378012276|gb|EHV75208.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|378015823|gb|EHV78714.1| potF [Escherichia coli DEC6E]
gi|378036704|gb|EHV99243.1| potF [Escherichia coli DEC7B]
gi|378132294|gb|EHW93646.1| potF [Escherichia coli DEC10E]
gi|378188907|gb|EHX49501.1| potF [Escherichia coli DEC13A]
gi|378204580|gb|EHX64996.1| potF [Escherichia coli DEC13B]
gi|378206760|gb|EHX67162.1| potF [Escherichia coli DEC13D]
gi|378207878|gb|EHX68266.1| potF [Escherichia coli DEC13C]
gi|378217725|gb|EHX78001.1| potF [Escherichia coli DEC13E]
gi|378223981|gb|EHX84189.1| potF [Escherichia coli DEC14B]
gi|378232035|gb|EHX92138.1| potF [Escherichia coli DEC14C]
gi|378234699|gb|EHX94775.1| potF [Escherichia coli DEC14D]
gi|378242613|gb|EHY02565.1| potF [Escherichia coli DEC15A]
gi|378251129|gb|EHY11030.1| potF [Escherichia coli DEC15C]
gi|378256876|gb|EHY16721.1| potF [Escherichia coli DEC15D]
gi|378260718|gb|EHY20518.1| potF [Escherichia coli DEC15E]
gi|383474083|gb|EID66081.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|384378552|gb|EIE36433.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|385157713|gb|EIF19704.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|385536497|gb|EIF83390.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|385707497|gb|EIG44528.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|385711690|gb|EIG48647.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|386122970|gb|EIG71574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386199608|gb|EIH98599.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|386212035|gb|EII22484.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|386225161|gb|EII47496.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|386230699|gb|EII58054.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|386232707|gb|EII64692.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|386239474|gb|EII76403.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|386256113|gb|EIJ05801.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|388385634|gb|EIL47309.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|388401822|gb|EIL62435.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|391255716|gb|EIQ14857.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|391278930|gb|EIQ37626.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|404341533|gb|EJZ67939.1| potF [Shigella flexneri 1485-80]
gi|406778654|gb|AFS58078.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055237|gb|AFS75288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064363|gb|AFS85410.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408197064|gb|EKI22335.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|408205387|gb|EKI30275.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|408571926|gb|EKK47853.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|408572938|gb|EKK48819.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|429349989|gb|EKY86724.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429350701|gb|EKY87426.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429351079|gb|EKY87800.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429365357|gb|EKZ01970.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429366308|gb|EKZ02911.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429368871|gb|EKZ05454.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429381278|gb|EKZ17765.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429382246|gb|EKZ18711.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429383681|gb|EKZ20140.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429395512|gb|EKZ31878.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429396726|gb|EKZ33074.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429397604|gb|EKZ33950.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429409332|gb|EKZ45562.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429417792|gb|EKZ53939.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429421461|gb|EKZ57582.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429423201|gb|EKZ59309.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429427203|gb|EKZ63288.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429434085|gb|EKZ70114.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429438072|gb|EKZ74066.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429443428|gb|EKZ79380.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429449531|gb|EKZ85430.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|429455407|gb|EKZ91263.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|430900594|gb|ELC22612.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|430942386|gb|ELC62519.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|431009710|gb|ELD24324.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|431062801|gb|ELD72061.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|431097397|gb|ELE02725.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|431164408|gb|ELE64799.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|431173021|gb|ELE73102.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|431201953|gb|ELF00649.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|431224165|gb|ELF21394.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|431229165|gb|ELF25817.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|431245988|gb|ELF40266.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|431285894|gb|ELF76729.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|431356162|gb|ELG42853.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|431386817|gb|ELG70770.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|431469452|gb|ELH49381.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|431571099|gb|ELI44006.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|441606984|emb|CCP96512.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|449324103|gb|EMD14041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|82776067|ref|YP_402414.1| putrescine ABC transporter periplasmic-binding protein [Shigella
dysenteriae Sd197]
gi|309786474|ref|ZP_07681098.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
gi|81240215|gb|ABB60925.1| periplasmic putrescine-binding protein [Shigella dysenteriae Sd197]
gi|308925662|gb|EFP71145.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEANNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|418945897|ref|ZP_13498573.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
gi|375318787|gb|EHS65157.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
Length = 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 42 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 100
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P EV +VL Y+G NS D G + L L R F S+ Y+ GD+
Sbjct: 101 PEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDI 156
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 157 CVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 205
>gi|218548373|ref|YP_002382164.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
fergusonii ATCC 35469]
gi|218355914|emb|CAQ88529.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ATCC 35469]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|193064481|ref|ZP_03045562.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|260843105|ref|YP_003220883.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|417177493|ref|ZP_12006974.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|417180250|ref|ZP_12007958.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
gi|192928943|gb|EDV82556.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|257758252|dbj|BAI29749.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|386176042|gb|EIH53524.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|386185605|gb|EIH68331.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|419917933|ref|ZP_14436152.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|432792074|ref|ZP_20026164.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|432798037|ref|ZP_20032062.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
gi|388392734|gb|EIL54143.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|431341656|gb|ELG28662.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|431345059|gb|ELG31991.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|386638205|ref|YP_006105003.1| putrescine-binding periplasmic protein [Escherichia coli ABU 83972]
gi|432410855|ref|ZP_19653536.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|432430903|ref|ZP_19673346.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|432435431|ref|ZP_19677830.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|432455718|ref|ZP_19697917.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|432494656|ref|ZP_19736472.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|432503495|ref|ZP_19745230.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|432522940|ref|ZP_19760077.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|432567686|ref|ZP_19804211.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|432591906|ref|ZP_19828233.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|432606673|ref|ZP_19842866.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|432650315|ref|ZP_19886075.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|432782739|ref|ZP_20016923.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|432843158|ref|ZP_20076493.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|432994584|ref|ZP_20183198.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|432999002|ref|ZP_20187540.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|433057146|ref|ZP_20244229.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|433114738|ref|ZP_20300552.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|433124397|ref|ZP_20309984.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|433138457|ref|ZP_20323741.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|433148244|ref|ZP_20333308.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|433206972|ref|ZP_20390667.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|433211720|ref|ZP_20395333.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|442606405|ref|ZP_21021205.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
gi|307552697|gb|ADN45472.1| putrescine-binding periplasmic protein precursor [Escherichia coli
ABU 83972]
gi|430937353|gb|ELC57608.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|430955343|gb|ELC74126.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|430965759|gb|ELC83168.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|430984445|gb|ELD01068.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|431027261|gb|ELD40324.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|431041541|gb|ELD52041.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|431054250|gb|ELD63831.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|431102634|gb|ELE07448.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|431131822|gb|ELE33838.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|431140125|gb|ELE41902.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|431192871|gb|ELE92215.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|431331138|gb|ELG18401.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|431396929|gb|ELG80391.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|431508797|gb|ELH87068.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|431513342|gb|ELH91425.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|431573714|gb|ELI46511.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|431636448|gb|ELJ04579.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|431649204|gb|ELJ16563.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|431664635|gb|ELJ31369.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|431676357|gb|ELJ42477.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|431732188|gb|ELJ95644.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|431735918|gb|ELJ99262.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|441712481|emb|CCQ07182.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|419955797|ref|ZP_14471919.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967393|gb|EIK51696.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 361
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 32/197 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G A PY WGT I Y K + + I+ W L+ P+ A + I+M++S
Sbjct: 117 DP-GNAHAVPYLWGTNGIGYNVEKVKAALGVDSIDSWAVLFEPQNAEKLASCGIAMLDSA 175
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E+I +VL Y+G NS N D + A ++ L + R F S+ Y+ G++
Sbjct: 176 DEMIPAVLNYLGLDPNSENPADYRKA------EEKLLAVRPHVRYFHSSKYISDLANGNI 229
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVR 259
VA G+S DV A R +A +PK G +LW D+ AIPA +
Sbjct: 230 CVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADA------------ 277
Query: 260 GPSPLIHQWIEFCLQTA 276
G H +I++ L+ A
Sbjct: 278 GNVEQAHAFIDYLLRPA 294
>gi|417789994|ref|ZP_12437590.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449308836|ref|YP_007441192.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
gi|333955915|gb|EGL73622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449098869|gb|AGE86903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEILKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLKKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D +G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R N++ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|218704278|ref|YP_002411797.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UMN026]
gi|293404158|ref|ZP_06648152.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|293409229|ref|ZP_06652805.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298379941|ref|ZP_06989546.1| putrescine transporter [Escherichia coli FVEC1302]
gi|331662266|ref|ZP_08363189.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|416896433|ref|ZP_11926280.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|417118740|ref|ZP_11969258.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|417137151|ref|ZP_11980941.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|417307307|ref|ZP_12094179.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|417585791|ref|ZP_12236564.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|419936211|ref|ZP_14453231.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|422332326|ref|ZP_16413340.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|422970756|ref|ZP_16974268.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|424815776|ref|ZP_18240927.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|432352815|ref|ZP_19596099.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|432401049|ref|ZP_19643803.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|432425105|ref|ZP_19667620.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|432459876|ref|ZP_19702033.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|432474965|ref|ZP_19716973.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|432488498|ref|ZP_19730383.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|432521547|ref|ZP_19758703.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|432536914|ref|ZP_19773831.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|432601390|ref|ZP_19837639.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|432630475|ref|ZP_19866419.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|432640073|ref|ZP_19875913.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|432665142|ref|ZP_19900728.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|432679277|ref|ZP_19914676.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|432717897|ref|ZP_19952892.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|432769704|ref|ZP_20004057.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|432774047|ref|ZP_20008333.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|432838517|ref|ZP_20072006.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|432849312|ref|ZP_20080534.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|432860597|ref|ZP_20085736.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|432873898|ref|ZP_20093166.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|432885269|ref|ZP_20099864.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|432911212|ref|ZP_20117693.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|432960421|ref|ZP_20150552.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|433017829|ref|ZP_20206090.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|433052230|ref|ZP_20239456.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|433062100|ref|ZP_20249057.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|433067109|ref|ZP_20253934.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|433157839|ref|ZP_20342704.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|433177391|ref|ZP_20361841.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|433202398|ref|ZP_20386195.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
gi|218431375|emb|CAR12253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UMN026]
gi|291428744|gb|EFF01769.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|291469697|gb|EFF12181.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298279639|gb|EFI21147.1| putrescine transporter [Escherichia coli FVEC1302]
gi|325496796|gb|EGC94655.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|327253641|gb|EGE65270.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|331060688|gb|EGI32652.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|338771178|gb|EGP25926.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|345338947|gb|EGW71373.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|371599786|gb|EHN88566.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|373246637|gb|EHP66089.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|386138274|gb|EIG79434.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|386158715|gb|EIH15048.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|388401680|gb|EIL62308.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|430877743|gb|ELC01177.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|430927647|gb|ELC48210.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|430958339|gb|ELC76933.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|430991159|gb|ELD07575.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|431008473|gb|ELD23274.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|431023066|gb|ELD36323.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|431044611|gb|ELD54883.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|431072491|gb|ELD80242.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|431143223|gb|ELE44961.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|431173510|gb|ELE73586.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|431184589|gb|ELE84346.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|431203547|gb|ELF02204.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|431224337|gb|ELF21564.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|431265576|gb|ELF57140.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|431317786|gb|ELG05562.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|431320045|gb|ELG07697.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|431390983|gb|ELG74631.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|431401312|gb|ELG84656.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|431404493|gb|ELG87744.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|431407581|gb|ELG90792.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|431419252|gb|ELH01610.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|431443928|gb|ELH24953.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|431478108|gb|ELH57867.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|431536201|gb|ELI12532.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|431575006|gb|ELI47763.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|431587016|gb|ELI58398.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|431589815|gb|ELI61021.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|431681215|gb|ELJ47021.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|431709300|gb|ELJ73770.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|431725038|gb|ELJ88949.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417665994|ref|ZP_12315556.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
gi|397786545|gb|EJK97381.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|389841581|ref|YP_006343665.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|424798972|ref|ZP_18224514.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|429090151|ref|ZP_19152883.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
gi|429109669|ref|ZP_19171439.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|429122224|ref|ZP_19182813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|387852057|gb|AFK00155.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|423234693|emb|CCK06384.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|426310826|emb|CCJ97552.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|426323276|emb|CCK13550.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|426509954|emb|CCK17995.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEILKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D +G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R N++ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|417601190|ref|ZP_12251772.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
gi|345353196|gb|EGW85432.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|366159061|ref|ZP_09458923.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia sp. TW09308]
gi|432371595|ref|ZP_19614648.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
gi|430899033|gb|ELC21139.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
Length = 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP G +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DP-GNKFAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|429333574|ref|ZP_19214268.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
gi|428761774|gb|EKX83994.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
Length = 361
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G + PY WGT I Y K ++ + I+ W L+ PE + ++ ++S
Sbjct: 117 DP-GNRHSVPYLWGTNGIGYNVDKVKQVLGVDHIDSWATLYEPENLKKLQQCGVAFMDSA 175
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E+I S+L Y+G NS+N A ++ L L F S+ Y+ GD+
Sbjct: 176 DELIPSILNYLGLDPNSSN-----AADYAKAEKRLLELRPYVTYFHSSKYISDLANGDIC 230
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DVL A R +A +PK G++LW DL AIPA ++
Sbjct: 231 VAFGFSGDVLQAANRAREAGNGVKIAYSIPKEGSNLWFDLIAIPADAK 278
>gi|191166164|ref|ZP_03027998.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|417595859|ref|ZP_12246518.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
gi|190903773|gb|EDV63488.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|345358605|gb|EGW90788.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
Length = 370
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|30062336|ref|NP_836507.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 2457T]
gi|56479743|ref|NP_706734.2| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 301]
gi|415854716|ref|ZP_11530302.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|417700887|ref|ZP_12350020.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|417706478|ref|ZP_12355534.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|417716351|ref|ZP_12365280.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|417721888|ref|ZP_12370729.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|417727257|ref|ZP_12375998.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|417732382|ref|ZP_12381051.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|420319367|ref|ZP_14821220.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|420340477|ref|ZP_14842001.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
gi|30040581|gb|AAP16313.1| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 2457T]
gi|56383294|gb|AAN42441.2| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 301]
gi|313650239|gb|EFS14651.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|332760493|gb|EGJ90782.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|332763068|gb|EGJ93313.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|333006656|gb|EGK26155.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|333006922|gb|EGK26417.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|333020148|gb|EGK39418.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|333020972|gb|EGK40230.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|391253555|gb|EIQ12728.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|391273034|gb|EIQ31863.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
Length = 370
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|386034068|ref|YP_005953981.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae KCTC 2242]
gi|424829863|ref|ZP_18254591.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|339761196|gb|AEJ97416.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae KCTC 2242]
gi|414707288|emb|CCN28992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
Length = 370
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPENK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|157160376|ref|YP_001457694.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli HS]
gi|170020743|ref|YP_001725697.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ATCC 8739]
gi|193069329|ref|ZP_03050284.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194438393|ref|ZP_03070483.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|251784398|ref|YP_002998702.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253774116|ref|YP_003036947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160969|ref|YP_003044077.1| putrescine transporter subunit periplasmic-binding component of ABC
superfamily [Escherichia coli B str. REL606]
gi|254287777|ref|YP_003053525.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BL21(DE3)]
gi|293414132|ref|ZP_06656781.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|312970978|ref|ZP_07785157.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|417120464|ref|ZP_11970022.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|417627783|ref|ZP_12278030.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|417690217|ref|ZP_12339441.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|421776936|ref|ZP_16213537.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|422835645|ref|ZP_16883698.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|425287734|ref|ZP_18678640.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|432453610|ref|ZP_19695847.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|432530189|ref|ZP_19767229.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|432542240|ref|ZP_19779096.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|432547710|ref|ZP_19784497.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|432620994|ref|ZP_19857035.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|432673850|ref|ZP_19909339.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|432814491|ref|ZP_20048281.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|433032350|ref|ZP_20220124.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|442599401|ref|ZP_21017119.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|157066056|gb|ABV05311.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli HS]
gi|169755671|gb|ACA78370.1| extracellular solute-binding protein family 1 [Escherichia coli
ATCC 8739]
gi|192957282|gb|EDV87730.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194422617|gb|EDX38614.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|242376671|emb|CAQ31382.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253325160|gb|ACT29762.1| extracellular solute-binding protein family 1 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972870|gb|ACT38541.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli B str. REL606]
gi|253977084|gb|ACT42754.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BL21(DE3)]
gi|291434190|gb|EFF07163.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|310336739|gb|EFQ01906.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|332088887|gb|EGI93999.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|345378087|gb|EGX10018.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|371611824|gb|EHO00343.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|386149119|gb|EIG95551.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|408216953|gb|EKI41240.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|408458050|gb|EKJ81840.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|430973749|gb|ELC90694.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|431056563|gb|ELD66064.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|431076494|gb|ELD83989.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|431083646|gb|ELD89818.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|431161460|gb|ELE61931.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|431217224|gb|ELF14804.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|431366714|gb|ELG53211.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|431558736|gb|ELI32345.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|441651671|emb|CCQ02616.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
Length = 370
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|425304379|ref|ZP_18694159.1| putrescine-binding periplasmic protein [Escherichia coli N1]
gi|408231148|gb|EKI54444.1| putrescine-binding periplasmic protein [Escherichia coli N1]
Length = 370
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|425080696|ref|ZP_18483793.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428936123|ref|ZP_19009554.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
gi|405605831|gb|EKB78835.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426298988|gb|EKV61354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
Length = 370
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPENK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|15800606|ref|NP_286620.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EDL933]
gi|15830188|ref|NP_308961.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. Sakai]
gi|168750039|ref|ZP_02775061.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|168756649|ref|ZP_02781656.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|168763295|ref|ZP_02788302.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|168767365|ref|ZP_02792372.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|168776396|ref|ZP_02801403.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|168779407|ref|ZP_02804414.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|168787076|ref|ZP_02812083.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|168799863|ref|ZP_02824870.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|195936899|ref|ZP_03082281.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. EC4024]
gi|208806865|ref|ZP_03249202.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208816015|ref|ZP_03257194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208822677|ref|ZP_03262996.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209397481|ref|YP_002269524.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EC4115]
gi|217326518|ref|ZP_03442602.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254792050|ref|YP_003076887.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. TW14359]
gi|261225504|ref|ZP_05939785.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258527|ref|ZP_05951060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK966]
gi|387505963|ref|YP_006158219.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O55:H7 str. RM12579]
gi|387881465|ref|YP_006311767.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli Xuzhou21]
gi|416309490|ref|ZP_11655862.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|416317369|ref|ZP_11660410.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|416332128|ref|ZP_11670207.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|416781959|ref|ZP_11877428.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|416793190|ref|ZP_11882351.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|416804456|ref|ZP_11887211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|416815481|ref|ZP_11891917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97]
gi|416825314|ref|ZP_11896502.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|416836159|ref|ZP_11901774.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|419043994|ref|ZP_13590965.1| potF [Escherichia coli DEC3A]
gi|419049501|ref|ZP_13596417.1| potF [Escherichia coli DEC3B]
gi|419055582|ref|ZP_13602435.1| potF [Escherichia coli DEC3C]
gi|419061154|ref|ZP_13607933.1| potF [Escherichia coli DEC3D]
gi|419067252|ref|ZP_13613727.1| potF [Escherichia coli DEC3E]
gi|419074036|ref|ZP_13619604.1| potF [Escherichia coli DEC3F]
gi|419079265|ref|ZP_13624747.1| potF [Escherichia coli DEC4A]
gi|419084900|ref|ZP_13630309.1| potF [Escherichia coli DEC4B]
gi|419090906|ref|ZP_13636223.1| potF [Escherichia coli DEC4C]
gi|419096798|ref|ZP_13642040.1| potF [Escherichia coli DEC4D]
gi|419102640|ref|ZP_13647805.1| potF [Escherichia coli DEC4E]
gi|419108002|ref|ZP_13653111.1| potF [Escherichia coli DEC4F]
gi|419113771|ref|ZP_13658801.1| potF [Escherichia coli DEC5A]
gi|419119409|ref|ZP_13664387.1| potF [Escherichia coli DEC5B]
gi|419125105|ref|ZP_13670002.1| potF [Escherichia coli DEC5C]
gi|419130657|ref|ZP_13675504.1| potF [Escherichia coli DEC5D]
gi|419135384|ref|ZP_13680190.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|420268190|ref|ZP_14770594.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|420273938|ref|ZP_14776270.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|420279166|ref|ZP_14781431.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|420285277|ref|ZP_14787492.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|420291047|ref|ZP_14793210.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|420296647|ref|ZP_14798740.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|420302899|ref|ZP_14804925.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|420308123|ref|ZP_14810095.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|420313944|ref|ZP_14815849.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|421811129|ref|ZP_16246928.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|421817210|ref|ZP_16252765.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|421822614|ref|ZP_16258051.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|421829352|ref|ZP_16264679.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|423664786|ref|ZP_17639948.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|424075800|ref|ZP_17813140.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|424082129|ref|ZP_17818980.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|424088762|ref|ZP_17825008.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|424094974|ref|ZP_17830719.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|424101395|ref|ZP_17836540.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|424108193|ref|ZP_17842759.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|424114185|ref|ZP_17848321.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|424120244|ref|ZP_17853937.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|424126484|ref|ZP_17859679.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|424132590|ref|ZP_17865381.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|424139133|ref|ZP_17871418.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|424145574|ref|ZP_17877334.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|424151707|ref|ZP_17882953.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|424190199|ref|ZP_17888392.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|424271769|ref|ZP_17894300.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|424425517|ref|ZP_17900023.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|424454119|ref|ZP_17905645.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|424460434|ref|ZP_17911345.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|424466903|ref|ZP_17917082.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|424473467|ref|ZP_17923127.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|424479398|ref|ZP_17928637.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|424485468|ref|ZP_17934323.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|424491650|ref|ZP_17939985.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|424498687|ref|ZP_17945949.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|424504922|ref|ZP_17951683.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|424511172|ref|ZP_17957385.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|424518707|ref|ZP_17963131.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|424524565|ref|ZP_17968579.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|424530770|ref|ZP_17974385.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|424536747|ref|ZP_17979997.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|424542666|ref|ZP_17985464.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|424548983|ref|ZP_17991173.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|424555230|ref|ZP_17996943.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|424561586|ref|ZP_18002866.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|424567616|ref|ZP_18008520.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|424573808|ref|ZP_18014218.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|424579757|ref|ZP_18019678.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|425096428|ref|ZP_18499441.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|425102572|ref|ZP_18505212.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|425108377|ref|ZP_18510615.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|425124212|ref|ZP_18525770.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|425130241|ref|ZP_18531330.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|425136608|ref|ZP_18537322.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|425142447|ref|ZP_18542734.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|425148796|ref|ZP_18548673.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|425154400|ref|ZP_18553942.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|425160846|ref|ZP_18560017.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|425166374|ref|ZP_18565175.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|425172659|ref|ZP_18571048.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|425178551|ref|ZP_18576593.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|425184697|ref|ZP_18582311.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|425191456|ref|ZP_18588572.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|425197765|ref|ZP_18594407.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|425204431|ref|ZP_18600551.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|425210183|ref|ZP_18605909.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|425216236|ref|ZP_18611541.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|425222818|ref|ZP_18617660.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|425229043|ref|ZP_18623426.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|425235348|ref|ZP_18629302.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|425241345|ref|ZP_18634973.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|425247471|ref|ZP_18640666.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|425253208|ref|ZP_18646067.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|425259483|ref|ZP_18651842.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|425265629|ref|ZP_18657530.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|425293065|ref|ZP_18683633.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|425309798|ref|ZP_18699252.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|425315720|ref|ZP_18704783.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|425321786|ref|ZP_18710444.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|425327978|ref|ZP_18716184.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|425334164|ref|ZP_18721866.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|425340576|ref|ZP_18727801.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|425346443|ref|ZP_18733234.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|425352679|ref|ZP_18739043.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|425358668|ref|ZP_18744625.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|425364782|ref|ZP_18750308.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|425371229|ref|ZP_18756175.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|425384022|ref|ZP_18767885.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|425390712|ref|ZP_18774152.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|425396831|ref|ZP_18779860.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|425402818|ref|ZP_18785409.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|425409356|ref|ZP_18791494.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|425415637|ref|ZP_18797257.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|425426770|ref|ZP_18807809.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|428945467|ref|ZP_19018081.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|428951601|ref|ZP_19023707.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|428957463|ref|ZP_19029130.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|428963788|ref|ZP_19034949.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|428970085|ref|ZP_19040698.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|428976320|ref|ZP_19046474.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|428982164|ref|ZP_19051881.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|428988392|ref|ZP_19057659.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|428994192|ref|ZP_19063083.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|429000330|ref|ZP_19068816.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|429006513|ref|ZP_19074403.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|429012847|ref|ZP_19080084.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|429019033|ref|ZP_19085798.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|429024771|ref|ZP_19091161.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|429031104|ref|ZP_19096955.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|429037257|ref|ZP_19102681.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|429043208|ref|ZP_19108188.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|429054348|ref|ZP_19118821.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|429059993|ref|ZP_19124125.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|429065501|ref|ZP_19129341.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429072024|ref|ZP_19135370.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|429077351|ref|ZP_19140559.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|429824593|ref|ZP_19356063.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429830949|ref|ZP_19361762.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444923286|ref|ZP_21242964.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444929588|ref|ZP_21248728.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444934879|ref|ZP_21253805.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444940477|ref|ZP_21259112.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444945996|ref|ZP_21264407.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444951622|ref|ZP_21269834.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444957096|ref|ZP_21275083.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444962346|ref|ZP_21280084.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444968098|ref|ZP_21285564.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444973600|ref|ZP_21290868.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444979146|ref|ZP_21296131.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444984435|ref|ZP_21301295.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444989680|ref|ZP_21306411.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444995028|ref|ZP_21311616.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|445000539|ref|ZP_21316993.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|445005998|ref|ZP_21322328.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|445011109|ref|ZP_21327293.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|445016943|ref|ZP_21332985.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|445022379|ref|ZP_21338293.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|445027636|ref|ZP_21343404.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|445033139|ref|ZP_21348751.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|445038828|ref|ZP_21354290.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|445044128|ref|ZP_21359455.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|445049620|ref|ZP_21364776.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|445055272|ref|ZP_21370213.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
gi|12513869|gb|AAG55230.1|AE005266_9 periplasmic putrescine-binding protein; permease protein
[Escherichia coli O157:H7 str. EDL933]
gi|13360393|dbj|BAB34357.1| periplasmic putrescine-binding permease protein [Escherichia coli
O157:H7 str. Sakai]
gi|187768225|gb|EDU32069.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|188015747|gb|EDU53869.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|189002793|gb|EDU71779.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|189356266|gb|EDU74685.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|189363385|gb|EDU81804.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|189366515|gb|EDU84931.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|189372977|gb|EDU91393.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|189377706|gb|EDU96122.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|208726666|gb|EDZ76267.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208732663|gb|EDZ81351.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208738162|gb|EDZ85845.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209158881|gb|ACI36314.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4115]
gi|209775388|gb|ACI86006.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775390|gb|ACI86007.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775392|gb|ACI86008.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775394|gb|ACI86009.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775396|gb|ACI86010.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|217322739|gb|EEC31163.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254591450|gb|ACT70811.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. TW14359]
gi|320192665|gb|EFW67306.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|320637720|gb|EFX07512.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|320642844|gb|EFX12045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|320648301|gb|EFX16956.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|320654138|gb|EFX22206.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659762|gb|EFX27318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|320664232|gb|EFX31383.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|326338256|gb|EGD62085.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|326346233|gb|EGD69971.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|374357957|gb|AEZ39664.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. RM12579]
gi|377899613|gb|EHU63959.1| potF [Escherichia coli DEC3A]
gi|377901563|gb|EHU65879.1| potF [Escherichia coli DEC3B]
gi|377913174|gb|EHU77318.1| potF [Escherichia coli DEC3C]
gi|377917240|gb|EHU81305.1| potF [Escherichia coli DEC3D]
gi|377919920|gb|EHU83954.1| potF [Escherichia coli DEC3E]
gi|377931012|gb|EHU94882.1| potF [Escherichia coli DEC3F]
gi|377933372|gb|EHU97217.1| potF [Escherichia coli DEC4A]
gi|377938272|gb|EHV02040.1| potF [Escherichia coli DEC4B]
gi|377949065|gb|EHV12705.1| potF [Escherichia coli DEC4C]
gi|377950236|gb|EHV13864.1| potF [Escherichia coli DEC4D]
gi|377953808|gb|EHV17372.1| potF [Escherichia coli DEC4E]
gi|377964471|gb|EHV27906.1| potF [Escherichia coli DEC5A]
gi|377966369|gb|EHV29781.1| potF [Escherichia coli DEC4F]
gi|377971052|gb|EHV34409.1| potF [Escherichia coli DEC5B]
gi|377979034|gb|EHV42312.1| potF [Escherichia coli DEC5C]
gi|377979228|gb|EHV42505.1| potF [Escherichia coli DEC5D]
gi|377986533|gb|EHV49723.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|386794923|gb|AFJ27957.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli Xuzhou21]
gi|390649846|gb|EIN28318.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|390651735|gb|EIN30005.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|390652334|gb|EIN30558.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|390669119|gb|EIN45824.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|390671954|gb|EIN48323.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|390672408|gb|EIN48710.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|390687857|gb|EIN63002.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|390690748|gb|EIN65534.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|390691427|gb|EIN66175.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|390707547|gb|EIN80891.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|390709358|gb|EIN82468.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|390710585|gb|EIN83603.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|390719497|gb|EIN92222.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|390732637|gb|EIO04322.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|390732735|gb|EIO04413.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|390735312|gb|EIO06706.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|390750969|gb|EIO20945.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|390751331|gb|EIO21246.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|390754208|gb|EIO23830.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|390762025|gb|EIO31295.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|390775337|gb|EIO43404.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|390776898|gb|EIO44777.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|390780850|gb|EIO48540.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|390784876|gb|EIO52432.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|390794140|gb|EIO61439.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|390801078|gb|EIO68144.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|390808183|gb|EIO75029.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|390811385|gb|EIO78099.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|390818724|gb|EIO85093.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|390821550|gb|EIO87733.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|390836209|gb|EIP00762.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|390838943|gb|EIP03120.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|390839560|gb|EIP03661.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|390854808|gb|EIP17585.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|390857497|gb|EIP19925.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|390857924|gb|EIP20345.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|390870573|gb|EIP32074.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|390875019|gb|EIP36101.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|390884737|gb|EIP45010.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|390887235|gb|EIP47221.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|390893064|gb|EIP52632.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|390903518|gb|EIP62564.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|390908495|gb|EIP67318.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|390911438|gb|EIP70143.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|390913492|gb|EIP72078.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|390924171|gb|EIP81973.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|390925768|gb|EIP83401.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|408071679|gb|EKH06014.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|408075796|gb|EKH10028.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|408085451|gb|EKH19075.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|408089287|gb|EKH22618.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|408094081|gb|EKH27126.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|408101117|gb|EKH33586.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|408109370|gb|EKH41297.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|408115823|gb|EKH47188.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|408121136|gb|EKH52100.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|408129305|gb|EKH59538.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|408131027|gb|EKH61088.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|408140179|gb|EKH69714.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|408149503|gb|EKH78181.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|408151363|gb|EKH79871.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|408156509|gb|EKH84711.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|408166220|gb|EKH93838.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|408170931|gb|EKH98081.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|408172925|gb|EKH99977.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|408186208|gb|EKI12315.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|408190227|gb|EKI15898.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|408190518|gb|EKI16163.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|408231932|gb|EKI55192.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|408237541|gb|EKI60396.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|408248449|gb|EKI70498.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|408252163|gb|EKI73860.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|408258338|gb|EKI79612.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|408267294|gb|EKI87758.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|408268977|gb|EKI89299.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|408278245|gb|EKI98007.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|408284083|gb|EKJ03212.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|408286693|gb|EKJ05612.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|408299337|gb|EKJ17148.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|408299613|gb|EKJ17384.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|408315542|gb|EKJ31857.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|408315977|gb|EKJ32275.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|408330518|gb|EKJ45781.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|408335392|gb|EKJ50238.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|408337053|gb|EKJ51799.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|408349769|gb|EKJ63691.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|408352658|gb|EKJ66202.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|408557774|gb|EKK34197.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|408558042|gb|EKK34457.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|408558495|gb|EKK34859.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|408584608|gb|EKK59608.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|408588631|gb|EKK63203.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|408589636|gb|EKK64138.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|408603451|gb|EKK77092.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|408605201|gb|EKK78730.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|408606704|gb|EKK80130.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|408616403|gb|EKK89558.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|427213627|gb|EKV83032.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|427215477|gb|EKV84659.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|427215607|gb|EKV84779.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|427232863|gb|EKW00662.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|427233218|gb|EKW01004.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|427234674|gb|EKW02351.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|427250446|gb|EKW17117.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|427252048|gb|EKW18570.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|427253304|gb|EKW19746.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|427269565|gb|EKW34522.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|427269724|gb|EKW34676.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|427274058|gb|EKW38723.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|427285691|gb|EKW49630.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|427291178|gb|EKW54622.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|427292734|gb|EKW56061.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|427305378|gb|EKW67973.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|427309436|gb|EKW71754.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|427320592|gb|EKW82347.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|427321409|gb|EKW83103.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|427333243|gb|EKW94353.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|427333455|gb|EKW94560.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|427336396|gb|EKW97374.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429259352|gb|EKY43049.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429261409|gb|EKY44854.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444541887|gb|ELV21323.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444549449|gb|ELV27692.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444551304|gb|ELV29275.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444564170|gb|ELV41127.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444566023|gb|ELV42861.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444570228|gb|ELV46770.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444581156|gb|ELV57024.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444584205|gb|ELV59856.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444585293|gb|ELV60871.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444598736|gb|ELV73649.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444599301|gb|ELV74191.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444606929|gb|ELV81530.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444613461|gb|ELV87720.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444613578|gb|ELV87836.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|444621892|gb|ELV95860.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|444631250|gb|ELW04854.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|444631514|gb|ELW05112.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|444636282|gb|ELW09684.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|444646662|gb|ELW19664.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|444649330|gb|ELW22231.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|444652302|gb|ELW25065.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|444661777|gb|ELW34065.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|444665940|gb|ELW38034.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|444672019|gb|ELW43779.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|444674070|gb|ELW45654.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|386618312|ref|YP_006137892.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|432420929|ref|ZP_19663484.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|432557835|ref|ZP_19794524.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|432709652|ref|ZP_19944717.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
gi|333968813|gb|AEG35618.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|430946546|gb|ELC66469.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|431093913|gb|ELD99569.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|431251354|gb|ELF45371.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|331682363|ref|ZP_08382982.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|432390887|ref|ZP_19633745.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|432615685|ref|ZP_19851812.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|450186707|ref|ZP_21889625.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
gi|331079994|gb|EGI51173.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|430921505|gb|ELC42329.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|431156860|gb|ELE57526.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|449324226|gb|EMD14163.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|387606407|ref|YP_006095263.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
gi|284920707|emb|CBG33770.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|398871289|ref|ZP_10626605.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398206544|gb|EJM93307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 365
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWGVLFEPENIKKLHSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A ++ L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKA------EEKLLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 234 CVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|389876148|ref|YP_006369713.1| PotF [Tistrella mobilis KA081020-065]
gi|388526932|gb|AFK52129.1| PotF [Tistrella mobilis KA081020-065]
Length = 379
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 41/244 (16%)
Query: 90 GEIDPR----------GKIWAAPYRWGTMVIAY--KKSKFRKHNLAPIEDWKDLWRPELA 137
G +DP+ G PY WGT I Y K K R AP++ W+ ++ PE+
Sbjct: 118 GNLDPKLMARVAKYDPGNEHLVPYMWGTTGIGYNVKMVKERLGENAPLDSWRLIFDPEVV 177
Query: 138 GR-----ISMVNSPREVIGSVLKYMGASYNSNNIDL--QVAGGKISVQQNLALLANQARL 190
+ +S+++SP E ++L Y+G + + ++ +VA + ++ ++ R
Sbjct: 178 SKLADCGVSVMDSPDETFPAMLNYLGLDPDGHKVEDVDKVAEAYMKIRPHI-------RK 230
Query: 191 FDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP 244
F ++ Y+ G+V VA+G+S D+L A R + + V+P GA LW D+ AIP
Sbjct: 231 FHNSQYINDLANGEVCVAMGYSGDILQARDRAQEADNGNEIVYVIPSEGAQLWFDMLAIP 290
Query: 245 A-ASRLETKQIG-GRVRGP--SPLIHQWIEFCLQTARALPFKQEVI---PGASPSALETT 297
A A E + P + I ++ + A+A P E + PG PS E T
Sbjct: 291 ADAPHPENAHTFINYILEPKVTAAISDYVAYANANAKATPLVSEDVRNDPGIYPS--EET 348
Query: 298 LVKL 301
+ +L
Sbjct: 349 MNRL 352
>gi|422830736|ref|ZP_16878890.1| putrescine-binding periplasmic protein [Escherichia coli B093]
gi|371603842|gb|EHN92477.1| putrescine-binding periplasmic protein [Escherichia coli B093]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|238893913|ref|YP_002918647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238546229|dbj|BAH62580.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 376
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 86 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPENK-YAMP 138
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 139 YLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 198
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 199 YLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 254
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 255 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 293
>gi|74311398|ref|YP_309817.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei Ss046]
gi|383177490|ref|YP_005455495.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei 53G]
gi|414575112|ref|ZP_11432318.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|415850294|ref|ZP_11527214.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|418263261|ref|ZP_12884326.1| potF [Shigella sonnei str. Moseley]
gi|420357600|ref|ZP_14858606.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|420362455|ref|ZP_14863371.1| potF [Shigella sonnei 4822-66]
gi|73854875|gb|AAZ87582.1| periplasmic putrescine-binding protein [Shigella sonnei Ss046]
gi|323165787|gb|EFZ51573.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|391287188|gb|EIQ45719.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|391288061|gb|EIQ46570.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|391296028|gb|EIQ54144.1| potF [Shigella sonnei 4822-66]
gi|397902732|gb|EJL19044.1| potF [Shigella sonnei str. Moseley]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|415836956|ref|ZP_11519206.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|417282938|ref|ZP_12070236.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|425276803|ref|ZP_18668129.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
gi|323190676|gb|EFZ75945.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|386244143|gb|EII85875.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|408206064|gb|EKI30883.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P EV +VL Y+G NS D G + L L R F S+ Y+ GD+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDI 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|418254221|ref|ZP_12879118.1| potF [Shigella flexneri 6603-63]
gi|397900578|gb|EJL16937.1| potF [Shigella flexneri 6603-63]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|420380950|ref|ZP_14880405.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
gi|391300985|gb|EIQ58888.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417638181|ref|ZP_12288347.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|419168841|ref|ZP_13713235.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|419179821|ref|ZP_13723444.1| potF [Escherichia coli DEC7C]
gi|419185382|ref|ZP_13728904.1| potF [Escherichia coli DEC7D]
gi|419190576|ref|ZP_13734043.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|419864881|ref|ZP_14387276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|420384482|ref|ZP_14883866.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|427803967|ref|ZP_18971034.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|427808553|ref|ZP_18975618.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|433129206|ref|ZP_20314674.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|433134030|ref|ZP_20319403.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443616928|ref|YP_007380784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
gi|345395035|gb|EGX24788.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|378018059|gb|EHV80926.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|378027006|gb|EHV89638.1| potF [Escherichia coli DEC7C]
gi|378032800|gb|EHV95381.1| potF [Escherichia coli DEC7D]
gi|378041813|gb|EHW04271.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|388338572|gb|EIL05020.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|391308840|gb|EIQ66527.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|412962149|emb|CCK46063.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|412968732|emb|CCJ43357.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|431650784|gb|ELJ18095.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|431661316|gb|ELJ28130.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443421436|gb|AGC86340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|307130758|ref|YP_003882774.1| putrescine ABC transporter substrate-binding protein [Dickeya
dadantii 3937]
gi|306528287|gb|ADM98217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Dickeya dadantii 3937]
Length = 369
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 110/252 (43%), Gaps = 43/252 (17%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 143
E DP G +A PY W T I Y K + AP+ W + +PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
++P E+ +VL Y G + NS N A L L R F S+ Y+ G
Sbjct: 180 DAPAEIYATVLNYQGKNPNSTN----EADYTKDATDLLLKLRPSVRYFHSSQYINDLANG 235
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIGG 256
D+ VA+GW+ DV+ A R N++ +PK GA + D++AIP A L++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSA---- 291
Query: 257 RVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNL 316
+Q++ + L+ V A+P+ T LVK E ++ P+
Sbjct: 292 ---------YQFLNYLLKPDVIANVSNHVY-YANPNKEATALVK---EEVRNNPNI---- 334
Query: 317 IVGVPPAEILAR 328
PPA+I A+
Sbjct: 335 ---YPPADIRAK 343
>gi|260867027|ref|YP_003233429.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|415824741|ref|ZP_11512975.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|417192859|ref|ZP_12014706.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|417590576|ref|ZP_12241291.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|419195972|ref|ZP_13739376.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|419891682|ref|ZP_14411727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|419894607|ref|ZP_14414503.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|420088758|ref|ZP_14600618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|420098068|ref|ZP_14609349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|424769414|ref|ZP_18196641.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257763383|dbj|BAI34878.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|323175524|gb|EFZ61119.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|345344522|gb|EGW76889.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|378051780|gb|EHW14095.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|386190040|gb|EIH78788.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|388349030|gb|EIL14580.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|388363444|gb|EIL27373.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|394382247|gb|EJE59894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|394389548|gb|EJE66690.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|421944063|gb|EKU01325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|403068806|ref|ZP_10910138.1| spermidine:putrescine ABC transporter [Oceanobacillus sp. Ndiop]
Length = 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP G ++ PY WGT+ I Y + + I + DLW PEL +I +++ RE++G
Sbjct: 126 FDP-GNNYSVPYFWGTVGIIYNPTLLPEG--KEITGFNDLWDPELENKILLIDGAREILG 182
Query: 152 SVLKYMGASYNSNNID-LQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S N + D LQ A K+ + N+ A++ ++ ++ + + +A
Sbjct: 183 MGLNSLGYSLNDTDEDHLQEALTKLKELTPNVKAIVGDENKMLMENN--------EAAIA 234
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
VGWS D + N+ VVP+ G++LW D + IP ++ HQ+
Sbjct: 235 VGWSGDARDIMWENENIDYVVPEEGSNLWFDNFVIPKTAQ------------NVDAAHQF 282
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I F L A E + ++P+ +E LK P N P E+ R
Sbjct: 283 INFMLDPEVAAQ-NTEYVSYSTPN----------KEALKYMPEDMVNDERFYPEPELTER 331
Query: 329 CEFLEPLSEATLSDYEWL 346
E E L + L+ Y L
Sbjct: 332 LEVYENLGKQHLAYYNEL 349
>gi|398992661|ref|ZP_10695625.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398136670|gb|EJM25751.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 365
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKIKTVLGVDSIDSWSVLFEPENIKKLQSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
+A+G+S D+ A R NVA +PK G +LW D+ AIP S
Sbjct: 234 CIAIGFSGDMFQAKARAEEAGKGVNVAYTIPKEGGALWFDMLAIPKDS 281
>gi|397688815|ref|YP_006526134.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810371|gb|AFN79776.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 365
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 32/223 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G ++ PY WGT+ I Y K + + AP++ W +++PE + ++ ++S
Sbjct: 120 DP-GNQYSVPYMWGTIGIGYNPEKVKAALGDNAPVDSWDLVFKPENIEKLKSCGVAFLDS 178
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E++ + L Y+G + +S D ++ +Q + F S+ Y+ G++
Sbjct: 179 PTEMLPAALHYLGYASDSGKADELKKAEELFLQ-----IRPHVAYFHSSKYISDLANGNI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQ----- 253
VA+G+S D+ A R NV+ +PK GA + D+ AIPA A +E
Sbjct: 234 CVAIGYSGDIYQAKSRAEDAQNGVNVSYNIPKEGAGSFFDMLAIPADAKNVENAHAFLNY 293
Query: 254 -IGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI---PGASPS 292
+ V P I +++F A A P E I PG PS
Sbjct: 294 LLKPEVMAP---IVDYVQFPSANAAATPLVDEAIRTDPGIYPS 333
>gi|311280262|ref|YP_003942493.1| extracellular solute-binding protein [Enterobacter cloacae SCF1]
gi|308749457|gb|ADO49209.1| extracellular solute-binding protein family 1 [Enterobacter cloacae
SCF1]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ R DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPELLKLIARH------DPENK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGKDAPVNSWDLVMKPENLQKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPDIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R N++ +PK GA + D++A+PA ++
Sbjct: 249 WQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAK 287
>gi|422806126|ref|ZP_16854558.1| extracellular solute-binding protein [Escherichia fergusonii B253]
gi|324112664|gb|EGC06640.1| extracellular solute-binding protein [Escherichia fergusonii B253]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P EV +VL Y+G NS D G + L L R F S+ Y+ GD+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDI 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|365139255|ref|ZP_09345724.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
gi|363654420|gb|EHL93323.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENFEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDI 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|399008900|ref|ZP_10711351.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398114411|gb|EJM04232.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 362
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + +L+ +K + A+ +W + L K L +ND G ++ P
Sbjct: 74 DLVVPSNHFLARQVKAGAFLKLDRAQLPNW-RNLDPKLLALLEQNDPG------NQYSVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W + PE + +SM++SP EV +VL Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGIDSIDSWAVFFEPENLKKLSQCGVSMMDSPDEVFPAVLNY 186
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
MG S N D + A K L + F S+ Y+ G++ +A G+S DV
Sbjct: 187 MGLDPRSENPADYKKAEAK------LLAIRPYITYFHSSKYVSDLANGNICLAFGYSGDV 240
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
A R +A +PK G++LW DL AIPA
Sbjct: 241 FQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|375264908|ref|YP_005022351.1| extracellular solute-binding protein [Vibrio sp. EJY3]
gi|369840232|gb|AEX21376.1| extracellular solute-binding protein [Vibrio sp. EJY3]
Length = 369
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVN 144
+DP ++ PY WGT I Y K + AP+ W +++PE + + +N
Sbjct: 123 VDPENA-YSVPYLWGTTGIGYNVEKVKAALGEDAPVNSWDLVFKPENMEKLAKCGVGFLN 181
Query: 145 SPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
+P E++ + L Y+G NS + + K + L + F S+ Y+ GD
Sbjct: 182 APSEIMAASLNYIGKDPNSTDPN----DYKKDALELLKTVRPYVTYFHSSQYINDLANGD 237
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VA+GWS DVL A R + +A +PK GA W DL AIP ++
Sbjct: 238 ICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKDAK 287
>gi|260432277|ref|ZP_05786248.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416105|gb|EEX09364.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 361
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIE 126
D+ L++ W V R + DP G ++ Y WGT I K ++ API+
Sbjct: 94 DKSKLPNLANMWDVIEER--TAQYDP-GNEYSINYMWGTTGIGVNVGKVQEALGEDAPID 150
Query: 127 DWKDLWRPE----LAG-RISMVNSPREVIGSVLKYMGASYNSNNIDL--QVAGGKISVQQ 179
W ++ PE LAG + +++P E+I + LKY+G +S++ D+ + G ++V+
Sbjct: 151 SWDLVFNPENMEKLAGCGVHFLDAPAEMIPAALKYIGEDPDSHDPDVIAKAEGVFMAVRP 210
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 233
+ + F S+ Y+ A GD+ VAVGWS DVL A R +A PK G
Sbjct: 211 YI-------QKFHSSEYINALANGDICVAVGWSGDVLQARDRADEADNGVTIAYHAPKEG 263
Query: 234 ASLWADLWAIPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQ 274
A +W D AIP V P+P H+++ F +
Sbjct: 264 AQMWFDQMAIP-------------VDAPNPDGAHKFLNFIMD 292
>gi|429210720|ref|ZP_19201886.1| extracellular solute-binding protein [Pseudomonas sp. M1]
gi|428158134|gb|EKX04681.1| extracellular solute-binding protein [Pseudomonas sp. M1]
Length = 365
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L IK + + ++ +W H K L ND G ++ P
Sbjct: 77 DIVVPSNHFLGRQIKAGAFQKLDKSQLPNWKNLDPHLMK-QLEANDPG------NLYGVP 129
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W L+ PE ++S ++S E++ +VLKY
Sbjct: 130 YLWGTNGIGYNVDKVKAVLGVDKIDSWAVLFEPENMKKLSQCGVAFLDSGDEMMPAVLKY 189
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G NS N D + A K L + F S+ Y+ G++ VA G+S DV
Sbjct: 190 LGLDPNSTNPADYEKAEAK------LMAVRPYVTYFHSSKYISDLANGNICVAAGFSGDV 243
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
A R N+A +PK GA+LW D+ AIP
Sbjct: 244 FQAANRAKEAGKGVNIAYAIPKEGANLWFDILAIP 278
>gi|37520928|ref|NP_924305.1| periplasmic spermidine/putrescine-binding protein [Gloeobacter
violaceus PCC 7421]
gi|35211923|dbj|BAC89300.1| glr1359 [Gloeobacter violaceus PCC 7421]
Length = 361
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP + + PY+WGT+ +A +K ++ PI W+DLW P GR+ +++ EV+G
Sbjct: 127 DPDNR-YTVPYQWGTVGLAVDTAKVKR----PISRWEDLWDPAFKGRVVLLDDEFEVLGM 181
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
L+ +G N+ + Q+A + LA L +LFDS A G+VW+ W+
Sbjct: 182 ALQTLGFDKNTKD-PAQLAKARA----KLAQLRPNIKLFDSDSPKTALLSGEVWLGQVWN 236
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 244
+ A + + + P G +W D WA+P
Sbjct: 237 GEAALAQRENPAIRYLCPAEGCGIWHDNWAVP 268
>gi|227820909|ref|YP_002824879.1| spermidine/putrescine ABC transporter substrate-binding protein
[Sinorhizobium fredii NGR234]
gi|227339908|gb|ACP24126.1| spermidine/putrescine ABC transporter, periplasmic
substrate-binding protein [Sinorhizobium fredii NGR234]
Length = 364
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 49/275 (17%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK---HNLAPIEDWKDLW 132
LS+ W + L R + DP G +A Y WGT I Y K ++ + P +W ++
Sbjct: 105 LSNMWDLILERT--AKYDP-GNEYAVDYMWGTTGIGYNVDKMKEILGTDAKP--NWDVIF 159
Query: 133 RPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLAN 186
PE+A + I +++SP ++I S L Y+G + +S++ DL+ A L +
Sbjct: 160 NPEIAAKFKDCGIHLLDSPTDIIPSALAYLGLNPDSHDPADLEKAADV------LLKVRP 213
Query: 187 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 240
R F S+ Y+ A GD+ +AVG+S D+ A R + V +P GA +W D+
Sbjct: 214 YIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEAKAGVTVDYSIPAQGAQMWFDM 273
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
A+PA + + H++I F + K EVI AS K
Sbjct: 274 LAMPADAPHVAEA------------HEFINFMM--------KPEVIAKASNYVFYANGNK 313
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
++ L + +DT + P +++ + + P
Sbjct: 314 ASQQFLDREVLEDTAI---YPTDDVMQKLFTVTPF 345
>gi|398998348|ref|ZP_10701126.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398120775|gb|EJM10428.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 362
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND P+ + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLALLEKND-----PQNA-HSVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLA 185
+ PE + +SM++S EV ++L YMG S N D + A K L +
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAMLNYMGMDPRSENPEDFKKAEAK------LLAIR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW D
Sbjct: 211 PYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFD 270
Query: 240 LWAIPA 245
L A+PA
Sbjct: 271 LLAVPA 276
>gi|416288836|ref|ZP_11649363.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
gi|320177812|gb|EFW52798.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
Length = 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|170769001|ref|ZP_02903454.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
gi|170122073|gb|EDS91004.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P EV +VL Y+G NS D G + L L R F S+ Y+ GD+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDI 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|18310953|ref|NP_562887.1| spermidine/putrescine ABC transporter [Clostridium perfringens str.
13]
gi|168212994|ref|ZP_02638619.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens CPE str. F4969]
gi|18145635|dbj|BAB81677.1| probable spermidine/putrescine ABC transporter [Clostridium
perfringens str. 13]
gi|170715466|gb|EDT27648.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens CPE str. F4969]
Length = 360
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP + ++ PY WGT+ I Y + P++ W LW P+ ++ M +S R+ +
Sbjct: 130 DPTNE-YSVPYMWGTVGIIYNTKRVSD----PVDSWNILWNPKYKDQVIMPDSVRDAMAV 184
Query: 153 VLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
K +G S N+ N+D ++ A ++ Q+ L+ A + D A G+ +AV W
Sbjct: 185 AEKKLGYSLNTENLDQIEAAKKELMTQKKDGLIL--AYMVDQVK--DAMVGGEASLAVAW 240
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
S D + ++R ++A +PK G++ W D AIP ++ + ++I F
Sbjct: 241 SGDAVTMIERNPDLAYAIPKEGSNKWFDAIAIPKNAKHKENA------------EKFINF 288
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
A E I ++P+ L LPE++ K V P E L CE
Sbjct: 289 LCDPENAEQ-NVEYIGYSTPNTAAYDL--LPEDIRDDK--------VAYPDEESLKNCEV 337
Query: 332 LEPLSEATLSDYE--WL 346
L L Y+ WL
Sbjct: 338 FIDLPSKILRKYDEAWL 354
>gi|423128300|ref|ZP_17115979.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
gi|376393656|gb|EHT06312.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
Length = 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 28/261 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAVP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH- 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAHI 308
Query: 267 -QWIEFCLQTARALPFKQEVI 286
+ + +LP E I
Sbjct: 309 SDHVYYANGNKASLPLVSEEI 329
>gi|336422449|ref|ZP_08602593.1| hypothetical protein HMPREF0993_01970 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336008375|gb|EGN38393.1| hypothetical protein HMPREF0993_01970 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 628
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 37/291 (12%)
Query: 58 KRLIEPIAGAE-DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSK 116
+R+IE AE D D + + Y+ + + + DP K ++ PY WGT+ I Y K+
Sbjct: 366 QRMIENDLLAEIDFDNLPNIKNIGDTYMEQ--SRQFDPENK-YSVPYCWGTVGILYNKTM 422
Query: 117 FRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKIS 176
+ PI+ W LW + I M +S R+ G LKY+G S NS ++D A K+
Sbjct: 423 VDE----PIDSWSVLWDEKYKDNILMQDSVRDAFGVTLKYLGYSLNSTDLDELEAAKKLL 478
Query: 177 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 236
++Q + QA + D K G + + V +S + + N+ V+PK G+++
Sbjct: 479 IKQKPLV---QAYVIDQVR-DKMIG-NEAAIGVIYSGEAIYTQWENPNLEYVIPKEGSNV 533
Query: 237 WADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF-CLQTARALPFKQEVIPGASPSALE 295
W D W IP ++ + ++I F C + F + I ++P+
Sbjct: 534 WIDSWVIPKNAKHKENA------------EKFINFICRPDIAKMNF--DYITYSTPNEAG 579
Query: 296 TTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 346
L++ P L+ P + P E LA CE + L + + Y L
Sbjct: 580 RQLIEDPA--LRNSP-------IAFPDPEELANCETFKFLGDENDALYNEL 621
>gi|395227557|ref|ZP_10405883.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. A1]
gi|421844409|ref|ZP_16277567.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|424728739|ref|ZP_18157344.1| putrescine abc transporter periplasmic substrate-binding protein
[Citrobacter sp. L17]
gi|394718885|gb|EJF24506.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. A1]
gi|411774564|gb|EKS58054.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|422896610|gb|EKU36392.1| putrescine abc transporter periplasmic substrate-binding protein
[Citrobacter sp. L17]
Length = 370
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
G+ DP K +A PY W T I Y K + AP++ W + +PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKLKSCGVSF 179
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
+++P EV +VL Y+G NS D G + L L R F S+ Y+
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLAN 235
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 236 GDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|392531710|ref|ZP_10278847.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Carnobacterium maltaromaticum ATCC 35586]
Length = 357
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 156/349 (44%), Gaps = 50/349 (14%)
Query: 6 KRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIA 65
K+ + + N S + +N ++ F K+K Y DL + + IK+ ++ P+
Sbjct: 52 KKFEKETNYKVSYETFDSNEAM-FTKIKQGGTAY---DLTIPSEYMIQKMIKEEMLIPL- 106
Query: 66 GAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPI 125
D+ K L + +L + D K ++ PY WGT+ I Y KF K +
Sbjct: 107 ---DKSKIKGLENIDSRFLDL----DFDLNNK-FSIPYFWGTLGIIYN-DKFVKE--EEM 155
Query: 126 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS-VQQNL-A 182
+ W DLW P+LA + +++ REVIG L +G S NS N+ L A K+S + N+ A
Sbjct: 156 QHWDDLWNPKLANNVMLIDGAREVIGLSLNSLGYSLNSKNMQQLTAASDKLSTLTPNVKA 215
Query: 183 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 242
++A++ +++ + VAV +S + + ++ V+P G++LW D +
Sbjct: 216 IVADEIKMYMVQE--------ESAVAVTFSGEASEMLDNNEHLHYVIPSEGSNLWFDNFV 267
Query: 243 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 302
IP ++ K+ + +I F L+ A E I ++P+ + + LP
Sbjct: 268 IPKTAK--NKEAA----------YAFINFMLEPKNAAQ-NAEYIGYSTPN--KAAMAYLP 312
Query: 303 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 351
+EL++ + P E ++ E E L L+ Y L + +
Sbjct: 313 KELVEDEQF--------YPSDETMSHLEVYEDLGAKYLAIYNDLFLEFK 353
>gi|168204845|ref|ZP_02630850.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens E str. JGS1987]
gi|169343777|ref|ZP_02864776.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens C str. JGS1495]
gi|422346637|ref|ZP_16427551.1| hypothetical protein HMPREF9476_01624 [Clostridium perfringens
WAL-14572]
gi|422874887|ref|ZP_16921372.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens F262]
gi|169298337|gb|EDS80427.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens C str. JGS1495]
gi|170663543|gb|EDT16226.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens E str. JGS1987]
gi|373226182|gb|EHP48509.1| hypothetical protein HMPREF9476_01624 [Clostridium perfringens
WAL-14572]
gi|380304161|gb|EIA16452.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens F262]
Length = 360
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP + ++ PY WGT+ I Y + P++ W LW P+ ++ M +S R+ +
Sbjct: 130 DPTNE-YSVPYMWGTVGIIYNTKRVSD----PVDSWNILWNPKYKDQVIMPDSVRDAMAV 184
Query: 153 VLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
K +G S N+ N+D ++ A ++ Q+ L+ A + D A G+ +AV W
Sbjct: 185 AEKKLGYSLNTENLDQIEAAKKELMTQKKDGLIL--AYMVDQVK--DAMVGGEASLAVAW 240
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
S D + ++R ++A +PK G++ W D AIP ++ + ++I F
Sbjct: 241 SGDAVTMIERNPDLAYAIPKEGSNKWFDAIAIPKNAKHKENA------------EKFINF 288
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
A E I ++P+ L LPE++ K V P E L CE
Sbjct: 289 LCDPENAEQ-NVEYIGYSTPNTAAYDL--LPEDIRDDK--------VAYPDEESLKNCEV 337
Query: 332 LEPLSEATLSDYE--WL 346
L L Y+ WL
Sbjct: 338 FIDLPSKILRKYDEAWL 354
>gi|110799081|ref|YP_696650.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Clostridium perfringens ATCC 13124]
gi|168208672|ref|ZP_02634297.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens B str. ATCC 3626]
gi|168215597|ref|ZP_02641222.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens NCTC 8239]
gi|182624392|ref|ZP_02952176.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens D str. JGS1721]
gi|110673728|gb|ABG82715.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens ATCC 13124]
gi|170713086|gb|EDT25268.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens B str. ATCC 3626]
gi|177910395|gb|EDT72772.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens D str. JGS1721]
gi|182382380|gb|EDT79859.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens NCTC 8239]
Length = 360
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP + ++ PY WGT+ I Y + P++ W LW P+ ++ M +S R+ +
Sbjct: 130 DPTNE-YSVPYMWGTVGIIYNTKRVSD----PVDSWNILWNPKYKDQVIMPDSVRDAMAV 184
Query: 153 VLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
K +G S N+ N+D ++ A ++ Q+ L+ A + D A G+ +AV W
Sbjct: 185 AEKKLGYSLNTENLDQIEAAKKELMTQKKDGLIL--AYMVDQVK--DAMVGGEASLAVAW 240
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
S D + ++R ++A +PK G++ W D AIP ++ + ++I F
Sbjct: 241 SGDAVTMIERNPDLAYAIPKEGSNKWFDAIAIPKNAKHKENA------------EKFINF 288
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
A E I ++P+ L LPE++ K V P E L CE
Sbjct: 289 LCDPENAEQ-NVEYIGYSTPNTAAYDL--LPEDIRDDK--------VAYPDEESLKNCEV 337
Query: 332 LEPLSEATLSDYE--WL 346
L L Y+ WL
Sbjct: 338 FIDLPSKILRKYDEAWL 354
>gi|455643997|gb|EMF23118.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii GTC 09479]
Length = 370
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
G+ DP K +A PY W T I Y K + AP++ W + +PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKLKSCGVSF 179
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
+++P EV +VL Y+G NS D G + L L R F S+ Y+
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLAN 235
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 236 GDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|386288729|ref|ZP_10065869.1| polyamine ABC transporter [gamma proteobacterium BDW918]
gi|385278284|gb|EIF42256.1| polyamine ABC transporter [gamma proteobacterium BDW918]
Length = 352
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 34/228 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPRE 148
DP G +++ PY + T +I Y ++K + + P DW ++ P ++ G++++++ E
Sbjct: 112 DP-GNVYSLPYAFTTTLIGYNENKITELGIDP-ADWSIIFDPAVLAKIKGKVTVMDDAEE 169
Query: 149 VIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWV 207
+ G+ LKY+G S N N + Q + L A F+S+ Y+K +G++WV
Sbjct: 170 LFGAALKYLGYSINDTN------EKHLKEAQAVILKAKPYWAAFNSSSYIKELTVGNIWV 223
Query: 208 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGP 261
A G+SSD+ A + V V+PK GA L D IP + R P
Sbjct: 224 AHGYSSDMFQARADAADAGRDFTVNFVLPKQGAVLALDNMVIPK-----------KARNP 272
Query: 262 SPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK 309
L H +I F + A ++ +P+A T + E++LK K
Sbjct: 273 E-LAHMFINFMMDPQNAAELTT-IVGTGNPNAAATPFID--EDILKIK 316
>gi|409396641|ref|ZP_11247621.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118823|gb|EKM95214.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 365
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 92 IDPR--GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPE-----LAGRISM 142
+DP G +A PY WGT+ I Y K + + AP++ W +++PE A +S
Sbjct: 116 LDPSDPGNQYAIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKACGVSF 175
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
++SP E++ + L Y+G + +S D ++ +Q + F S+ Y+
Sbjct: 176 LDSPTEILPAALHYLGYAPDSGKADELKKAEELFMQ-----IRPHVAYFHSSKYISDLAN 230
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG 255
G+ VA+G+S D+ A R NV +PK GA + D+ AIPA A +E +
Sbjct: 231 GETCVAIGYSGDIYQAKARAEEAKNGVNVGYKIPKEGAGSFFDMVAIPADAKNVENAHVF 290
Query: 256 -GRVRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 292
+ P + I +++F A + P E I PG PS
Sbjct: 291 INYLMKPEVMASITDYVQFPNANAASTPLVAEAIRTDPGIYPS 333
>gi|429108125|ref|ZP_19169994.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
gi|426294848|emb|CCJ96107.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
Length = 370
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEILKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D +G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKPD-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R N++ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|303234048|ref|ZP_07320697.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna BVS033A4]
gi|302494973|gb|EFL54730.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna BVS033A4]
Length = 341
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 27/255 (10%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK + Y D+V D IK+ ++E I ++ + FK + ++K
Sbjct: 62 YMKVKEGGSNY---DVVVPSDYMAEKMIKQGMLEKIDYSKIPN-FKYIDQRFK------- 110
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ DP+ + + PY WGT+ I Y K+K ++ ++ W LW + I M+NS R+
Sbjct: 111 NLDYDPKNE-YTVPYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRD 165
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
+G LK +G S NS N+ +L+ A + Q++L L A L D T D +
Sbjct: 166 TLGVALKRLGYSMNSRNDAELEKAKQSLIKQKDLVL----AYLVDETKTQMVNEEAD--L 219
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI--PAASRLETKQIGGRVRGP--SP 263
AV +S D + + N+ V+PK G++LW D AI A ++ ++ + P +
Sbjct: 220 AVMYSGDAIVSKGENENLEYVIPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAK 279
Query: 264 LIHQWIEFCLQTARA 278
L ++I + L + +A
Sbjct: 280 LNAEYIGYSLPSTQA 294
>gi|377576361|ref|ZP_09805345.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
gi|377542393|dbj|GAB50510.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
Length = 370
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 103/239 (43%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPELLKLTAKH------DPENK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + P+ W + +PE + +S +++P EV +VL
Sbjct: 133 YLWATTGIGYNVDKVKAALGGDVPLNSWDLVLKPENLAKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSEKADDYTG----PATELLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R N++ ++PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNISYIIPKEGALAFFDVFAMPTDAKNKEEAYQFLNYLMRPDVIAH 307
>gi|283833847|ref|ZP_06353588.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
gi|291070515|gb|EFE08624.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
Length = 370
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
G+ DP K +A PY W T I Y K + AP++ W + +PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKLKSCGVSF 179
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
+++P EV +VL Y+G NS D G + L L R F S+ Y+
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLAN 235
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 236 GDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|317047520|ref|YP_004115168.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b]
gi|316949137|gb|ADU68612.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b]
Length = 369
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y+G NS++ D A + L L R F S+ Y+ G+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDPKDYSGAATDL-----LLKLRPSIRYFHSSQYINDLANGN 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VA+GWS D+L A R + N+A VPK GA + D+ AIP ++
Sbjct: 237 ICVAIGWSGDILQAKDRAAQAKNGVNLAYSVPKQGALAFFDMMAIPKDAK 286
>gi|417925726|ref|ZP_12569144.1| ABC transporter, solute-binding protein [Finegoldia magna
SY403409CC001050417]
gi|341590933|gb|EGS34151.1| ABC transporter, solute-binding protein [Finegoldia magna
SY403409CC001050417]
Length = 341
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 27/255 (10%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK + Y D+V D IK+ ++E I ++ + FK + ++K
Sbjct: 62 YMKVKEGGSNY---DVVVPSDYMAEKMIKQGMLEKIDYSKIPN-FKYIDQRFK------- 110
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ DP+ + + PY WGT+ I Y K+K ++ ++ W LW + I M+NS R+
Sbjct: 111 NLDYDPKNE-YTVPYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRD 165
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
+G LK +G S NS N+ +L+ A + Q++L L A L D T D +
Sbjct: 166 TLGVALKRLGYSMNSRNDAELEKAKQSLIKQKDLVL----AYLVDETKTQMVNEEAD--L 219
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI--PAASRLETKQIGGRVRGP--SP 263
AV +S D + + N+ V+PK G++LW D AI A ++ ++ + P +
Sbjct: 220 AVMYSGDAIVSKGENENLEYVIPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAK 279
Query: 264 LIHQWIEFCLQTARA 278
L ++I + L + +A
Sbjct: 280 LNAEYIGYSLPSTQA 294
>gi|329927991|ref|ZP_08281995.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
gi|328938095|gb|EGG34492.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
Length = 350
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 45/311 (14%)
Query: 6 KRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPI- 64
K + + ++ + D NN + K+KA + Y DL+ D + I+ L+EP+
Sbjct: 48 KDFEEKFDVKVTYDNYANNEDL-LAKIKAGGSGY---DLIQPSDYMVKTMIESELLEPLD 103
Query: 65 -----AGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK 119
D FK S+ DP G ++ Y G IAY K +
Sbjct: 104 MNNIPNFVNITDTFKDPSY--------------DP-GNKYSIVYTSGVTGIAYNKKYVKD 148
Query: 120 HNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 179
I W+DLW PE G++ +++ RE+IG LK G S NS+ + ++ +
Sbjct: 149 E----INSWEDLWNPEYKGKVLLLDDNREMIGMALKKQGKS-NSSTDEAEIT----AASD 199
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 239
L L FD+ + + + W+A WS D +VA VVP+ GA++++D
Sbjct: 200 ELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAAFIAAENPDVAYVVPEEGATIFSD 259
Query: 240 LWAIPAASR---LETKQIGGRVRGP-SPLIHQWIEFCLQTARALPFKQEVIPGASPSALE 295
+AIP ++ L K I + S +++I + +A+ F E
Sbjct: 260 NYAIPKGAKNKELAEKFINFMMEPEVSAKNYEFIGYSNPNTKAMEFHSEEYRA------- 312
Query: 296 TTLVKLPEELL 306
T++ L EE L
Sbjct: 313 NTMINLTEEEL 323
>gi|423139332|ref|ZP_17126970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379051886|gb|EHY69777.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 371
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N+A +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNIAFSIPKEGAMAFFDVFAMPADAK 288
>gi|339998775|ref|YP_004729658.1| putrescine-binding periplasmic protein [Salmonella bongori NCTC
12419]
gi|339512136|emb|CCC29867.1| putrescine-binding periplasmic protein precursor [Salmonella
bongori NCTC 12419]
Length = 370
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGEDAPVNSWDLVLKPENLAKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y+G NS+N A +L L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLGKDPNSSN-----ANDYTGPATDLLLKLRPNIRYFHSSQYINDLANGD 237
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 TCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|261404067|ref|YP_003240308.1| family 1 extracellular solute-binding protein [Paenibacillus sp.
Y412MC10]
gi|261280530|gb|ACX62501.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
Y412MC10]
Length = 350
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 45/311 (14%)
Query: 6 KRLKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPI- 64
K + + ++ + D NN + K+KA + Y DL+ D + I+ L+EP+
Sbjct: 48 KDFEEKFDVKVTYDNYANNEDL-LAKIKAGGSGY---DLIQPSDYMVKTMIESELLEPLD 103
Query: 65 -----AGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK 119
D FK S+ DP G ++ Y G IAY K +
Sbjct: 104 MNNIPNFVNITDTFKDPSY--------------DP-GNKYSIVYTSGVTGIAYNKKYVKD 148
Query: 120 HNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 179
I W+DLW PE G++ +++ RE+IG LK G S NS+ + ++ +
Sbjct: 149 E----INSWEDLWNPEYKGKVLLLDDNREMIGMALKKQGKS-NSSTDEAEIT----AASD 199
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 239
L L FD+ + + + W+A WS D +VA VVP+ GA++++D
Sbjct: 200 ELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAAFIAAENPDVAYVVPEEGATIFSD 259
Query: 240 LWAIPAASR---LETKQIGGRVRGP-SPLIHQWIEFCLQTARALPFKQEVIPGASPSALE 295
+AIP ++ L K I + S +++I + +A+ F E
Sbjct: 260 NYAIPKGAKNKELAEKFINFMMEPEVSAKNYEFIGYSNPNTKAMEFHSEEYRA------- 312
Query: 296 TTLVKLPEELL 306
T++ L EE L
Sbjct: 313 NTMINLTEEEL 323
>gi|161503961|ref|YP_001571073.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|160865308|gb|ABX21931.1| hypothetical protein SARI_02053 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 371
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA R
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADGR 288
>gi|55821511|ref|YP_139953.1| putrescine/spermidine ABC transporter subtrate-binding protein
[Streptococcus thermophilus LMG 18311]
gi|55737496|gb|AAV61138.1| Polyamine (putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus LMG 18311]
Length = 356
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WGT+ I Y +K AP + W DLW PE +I MV+ REVIG
Sbjct: 126 FDPNND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIG 180
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G S N+ N+ +L++A K+ S+ N+ A++ ++ +K + I GD +
Sbjct: 181 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDE---------MKGYMIQGDAAI 231
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
V +S + + + ++ VVP G++LW D IP + E + +
Sbjct: 232 GVTFSGEASEMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YA 279
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQDT 314
+I F L+ A E I A+P+ TL LP+ + K PS+ T
Sbjct: 280 FINFMLKPENAAQ-NAEYIGYATPNEAAKTL--LPKSITNDKAFYPSEST 326
>gi|167758404|ref|ZP_02430531.1| hypothetical protein CLOSCI_00744 [Clostridium scindens ATCC 35704]
gi|167664301|gb|EDS08431.1| ABC transporter, solute-binding protein [Clostridium scindens ATCC
35704]
Length = 628
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 40/308 (12%)
Query: 40 MAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIW 99
+A D+V D + I+ L+ I D D + + Y+ + + + DP K +
Sbjct: 353 IAYDVVCPSDYMIQRMIENDLLAEI----DFDNIPNIRNIGDTYM--DQSRQFDPENK-Y 405
Query: 100 AAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 159
+ PY WGT+ I Y K+ + PI+ W LW + I M +S R+ G LKY+G
Sbjct: 406 SVPYCWGTVGILYNKTMVDE----PIDSWSVLWDEKYKDNILMQDSVRDAFGVTLKYLGY 461
Query: 160 SYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 219
S NS ++D A K+ ++Q + QA + D K G + + V +S + +
Sbjct: 462 SLNSTDLDELEAAKKLLIKQKPLV---QAYVIDQVR-DKMIG-NEAAIGVIYSGEAIYTQ 516
Query: 220 KRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF-CLQTARA 278
N+ V+PK G+++W D W IP ++ + ++I F C
Sbjct: 517 WENPNLEYVIPKEGSNVWIDSWVIPKNAKHKENA------------EKFINFICRPDIAK 564
Query: 279 LPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 338
+ F + I ++P+ L++ P L+ P + P E LA CE + L +
Sbjct: 565 MNF--DYITYSTPNEAGRQLIEDPA--LRNSP-------IAFPDPEELANCETFKFLGDE 613
Query: 339 TLSDYEWL 346
+ Y L
Sbjct: 614 NDALYNEL 621
>gi|116628225|ref|YP_820844.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|386087136|ref|YP_006003010.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus ND03]
gi|386345215|ref|YP_006041379.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus JIM 8232]
gi|387910236|ref|YP_006340542.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus MN-ZLW-002]
gi|116101502|gb|ABJ66648.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|312278849|gb|ADQ63506.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus ND03]
gi|339278676|emb|CCC20424.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus JIM 8232]
gi|387575171|gb|AFJ83877.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus MN-ZLW-002]
Length = 355
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WGT+ I Y +K AP + W DLW PE +I MV+ REVIG
Sbjct: 125 FDPNND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIG 179
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G S N+ N+ +L++A K+ S+ N+ A++ ++ +K + I GD +
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDE---------MKGYMIQGDAAI 230
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
V +S + + + ++ VVP G++LW D IP + E + +
Sbjct: 231 GVTFSGEASEMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YA 278
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQDT 314
+I F L+ A E I A+P+ TL LP+ + K PS+ T
Sbjct: 279 FINFMLKPENAAQ-NAEYIGYATPNEAAKTL--LPKSITNDKAFYPSEST 325
>gi|304415318|ref|ZP_07396003.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
gi|304282836|gb|EFL91314.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
Length = 379
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIG 151
+A PY W T VI Y K ++ AP W + + E + +S +++P E+
Sbjct: 138 FAIPYLWNTTVIGYNVEKIKEALGEDAPTNSWDLVLKAENLAKLKNCGVSFLDAPSEIFA 197
Query: 152 SVLKYMGASYNSNNIDLQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
+VL Y+G NS Q+A S + L L R F S+ Y+ GD+ VAVG
Sbjct: 198 TVLHYLGKDANS-----QLASDYTGSATELLLTLRPNIRYFHSSKYINDLANGDICVAVG 252
Query: 211 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
W+ D++ A R+ N+A +PK GA + D++A+PA ++
Sbjct: 253 WNGDIVQAANRIKEANNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|417455361|ref|ZP_12163500.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|353634815|gb|EHC81292.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
Length = 349
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 134 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 192
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 193 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 248
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 249 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 297
>gi|291550273|emb|CBL26535.1| Spermidine/putrescine-binding periplasmic protein [Ruminococcus
torques L2-14]
Length = 625
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 40 MAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIW 99
+A D+V D + I+ L+E I ++ K + K+ + A DP K +
Sbjct: 350 IAYDVVCPSDYMIQRMIENNLLEEI-NYDNIPNLKYIDQKY-----MDLAKGFDPDNK-Y 402
Query: 100 AAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 159
+ PY WGT+ I Y K + PI+ W LW + I M +S R+ G LKY+G
Sbjct: 403 SVPYLWGTVGILYNKKMVDE----PIDSWGVLWDEKYKDSILMQDSVRDAFGVALKYLGY 458
Query: 160 SYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 218
S NS ++D LQ A + Q+ L QA + D K G + + V +S + L
Sbjct: 459 SLNSTDLDELQAAKNLLIEQKPLV----QAYVIDQVRD-KMIG-NEAALGVIYSGEALYC 512
Query: 219 VKRMSNVAVVVPKSGASLWADLWAIP 244
+ N+ V+PK G++LW D W IP
Sbjct: 513 QQENPNLDYVIPKEGSNLWIDSWVIP 538
>gi|421725684|ref|ZP_16164869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
gi|410373478|gb|EKP28174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
Length = 370
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 28/261 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAIP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH- 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAHI 308
Query: 267 -QWIEFCLQTARALPFKQEVI 286
+ + +LP E I
Sbjct: 309 SDHVYYANGNKASLPLVSEEI 329
>gi|238795802|ref|ZP_04639315.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
gi|238720265|gb|EEQ12068.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
Length = 369
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-FAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS +Q + L L R F S+ Y+ GD+
Sbjct: 182 PSEIFATVLNYLGKDPNS----IQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VAVGW+ D++ A R NVA +PK GA + D++A+P+ ++
Sbjct: 238 CVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|417340403|ref|ZP_12121730.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|357959170|gb|EHJ83510.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
Length = 294
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 79 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 137
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 138 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 193
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 194 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 242
>gi|421502860|ref|ZP_15949812.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|400346317|gb|EJO94675.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 364
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + +L IK + P+ ++ +W K L L +ND G + P
Sbjct: 75 DLVIPSNQFLETQIKAGVFAPLDKSKLPNW-KNLDPVLLGLLEKNDPG------NQYGVP 127
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y +GT++I Y K + + AP+ W +++PE + ++M++SP E+I L
Sbjct: 128 YMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALH 187
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+N V + L + F S Y+ GD+ VA+G+S
Sbjct: 188 YLGLDPNSSN-----PADYDKVTELLLKVRPYVAYFHSAKYMTDIANGDICVAIGYSGSF 242
Query: 216 LPAVKRM---SNVAVV---VPKSGASLWADLWAIPAASR 248
R N V+ +PK GA +W D WAIP +++
Sbjct: 243 YQFANRAKEAGNGVVINWRLPKEGAPIWFDTWAIPKSAQ 281
>gi|323485348|ref|ZP_08090697.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
symbiosum WAL-14163]
gi|355625500|ref|ZP_09048281.1| hypothetical protein HMPREF1020_02360 [Clostridium sp. 7_3_54FAA]
gi|323401384|gb|EGA93733.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
symbiosum WAL-14163]
gi|354821324|gb|EHF05714.1| hypothetical protein HMPREF1020_02360 [Clostridium sp. 7_3_54FAA]
Length = 645
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
E DP +++ PY WGT+ I Y + L + W DLW P G I M +S R+
Sbjct: 406 EFDPEN-LYSVPYTWGTVGILYNTKTIEERGLPVPKKWSDLWNPAYKGEILMQDSVRDAF 464
Query: 151 GSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
LK G S N+ NI +LQ A + Q+ L QA + D K G G+ + V
Sbjct: 465 MVALKARGYSMNTENINELQEAKADLIAQKPLV----QAYVIDQVRD-KMIG-GEAALGV 518
Query: 210 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP 263
+S ++L + + N + V+P+ G +LW D W IPA ++ +
Sbjct: 519 IFSGEMLYIQEEVENQNLDYSLEYVIPEEGTNLWIDSWVIPADAKNKENA---------- 568
Query: 264 LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPA 323
+WI F + AL E I A+P+ K +ELL + + P
Sbjct: 569 --EKWINFLCRPDIALK-NFEYITYATPN-------KAAKELLDEDMQNNKAVF---PDM 615
Query: 324 EILARCEFLEPLSEATLSDYEWL 346
+ L CE L + T + Y L
Sbjct: 616 DQLENCEVYRYLGDETDAVYNNL 638
>gi|254993330|ref|ZP_05275520.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J2-064]
Length = 357
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+A L LP+E+ S D P + L E + L
Sbjct: 289 ENA-AINAEYVGYATPNAKAVEL--LPKEI-----SSDERF---YPDMDELNNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|398983481|ref|ZP_10690058.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399013788|ref|ZP_10716090.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398112689|gb|EJM02545.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398157207|gb|EJM45608.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWGVLFEPENIKKLQSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL Y+G + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYLGLNANSTNPKDYEKATDK------LLAVRPYVTYFHSSKYIGDLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A R + N+A VPK G +LW D+ AIP S
Sbjct: 234 CVAIGFSGDIFQAKNRAAEAKKGVNIAYAVPKEGGALWFDMLAIPKDS 281
>gi|415771503|ref|ZP_11485362.1| putrescine-binding periplasmic protein [Escherichia coli 3431]
gi|315619861|gb|EFV00380.1| putrescine-binding periplasmic protein [Escherichia coli 3431]
Length = 370
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
A K NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNCAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|445381416|ref|ZP_21427083.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5460]
gi|445394349|ref|ZP_21428817.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5461]
gi|444748944|gb|ELW73887.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5461]
gi|444749052|gb|ELW73987.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5460]
Length = 355
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WGT+ I Y +K AP + W DLW PE +I MV+ REVIG
Sbjct: 125 FDPNND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMMVDGAREVIG 179
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G S N+ N+ +L++A K+ S+ N+ A++ ++ +K + I GD +
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDE---------MKGYMIQGDAAI 230
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
V +S + + + ++ VVP G++LW D IP + E + +
Sbjct: 231 GVTFSGEASEMLDKNKDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YA 278
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQDT 314
+I F L+ A E I A+P+ TL LP+ + K PS+ T
Sbjct: 279 FINFMLKPENAAQ-NAEYIGYATPNEAAKTL--LPKSITNDKAFYPSEST 325
>gi|417254724|ref|ZP_12046475.1| putrescine-binding periplasmic protein [Escherichia coli 4.0967]
gi|419288390|ref|ZP_13830500.1| potF [Escherichia coli DEC11A]
gi|419293742|ref|ZP_13835797.1| potF [Escherichia coli DEC11B]
gi|378135268|gb|EHW96580.1| potF [Escherichia coli DEC11A]
gi|378145241|gb|EHX06407.1| potF [Escherichia coli DEC11B]
gi|386215006|gb|EII31503.1| putrescine-binding periplasmic protein [Escherichia coli 4.0967]
Length = 370
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVLFSIPKEGAMAFFDVFAMPADAK 287
>gi|255029864|ref|ZP_05301815.1| spermidine/putrescine-binding protein [Listeria monocytogenes LO28]
Length = 296
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 71 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 127
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + VAV +S +
Sbjct: 128 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLL--------MADNEAGVAVTFSGEA 179
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 180 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 227
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+A L LP+E+ S D P + L E + L
Sbjct: 228 ENA-AINAEYVGYATPNAKAVEL--LPKEI-----SSDERF---YPDMDELNNLEVYDNL 276
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 277 GKRMLSYYNELFLEFK 292
>gi|146305165|ref|YP_001185630.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|145573366|gb|ABP82898.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
Length = 364
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + +L IK + P+ ++ +W K L L +ND G + P
Sbjct: 75 DLVIPSNQFLETQIKAGVFAPLDKSKLPNW-KNLDPVLLGLLEKNDPG------NQYGVP 127
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y +GT++I Y K + + AP+ W +++PE + ++M++SP E+I L
Sbjct: 128 YMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALH 187
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+N V + L + F S Y+ GD+ VA+G+S
Sbjct: 188 YLGLDPNSSN-----PADYDKVTELLLKVRPYVAYFHSAKYMTDIANGDICVAIGYSGSF 242
Query: 216 LPAVKRM---SNVAVV---VPKSGASLWADLWAIPAASR 248
R N V+ +PK GA +W D WAIP +++
Sbjct: 243 YQFANRAKEAGNGVVINWRLPKEGAPIWFDTWAIPKSAQ 281
>gi|16802852|ref|NP_464337.1| hypothetical protein lmo0810 [Listeria monocytogenes EGD-e]
gi|46907040|ref|YP_013429.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 4b str. F2365]
gi|47094815|ref|ZP_00232429.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|226223427|ref|YP_002757534.1| spermidine/putrescine-binding protein [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254823923|ref|ZP_05228924.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|254828893|ref|ZP_05233580.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|254853773|ref|ZP_05243121.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|254911493|ref|ZP_05261505.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|254931190|ref|ZP_05264549.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|254935819|ref|ZP_05267516.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284801140|ref|YP_003413005.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284994282|ref|YP_003416050.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|300765116|ref|ZP_07075103.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|386043137|ref|YP_005961942.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|386046472|ref|YP_005964804.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|386049737|ref|YP_005967728.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|386053073|ref|YP_005970631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|386731563|ref|YP_006205059.1| extracellular solute-binding protein [Listeria monocytogenes
07PF0776]
gi|404280362|ref|YP_006681260.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404283250|ref|YP_006684147.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404286220|ref|YP_006692806.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|404410049|ref|YP_006695637.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404412893|ref|YP_006698480.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|405749162|ref|YP_006672628.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|405752027|ref|YP_006675492.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|405754888|ref|YP_006678352.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|405757805|ref|YP_006687081.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|406703584|ref|YP_006753938.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|417317055|ref|ZP_12103681.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|424713687|ref|YP_007014402.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
gi|424822534|ref|ZP_18247547.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|16410199|emb|CAC98888.1| lmo0810 [Listeria monocytogenes EGD-e]
gi|46880306|gb|AAT03606.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47016697|gb|EAL07616.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|225875889|emb|CAS04593.1| Putative spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601306|gb|EEW14631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|258607153|gb|EEW19761.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|258608406|gb|EEW21014.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284056702|gb|ADB67643.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284059749|gb|ADB70688.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|293582738|gb|EFF94770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|293589436|gb|EFF97770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|293593149|gb|EFG00910.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|300514241|gb|EFK41301.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|328475514|gb|EGF46273.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|332311214|gb|EGJ24309.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|345533463|gb|AEO02904.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|345536371|gb|AEO05811.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|346423583|gb|AEO25108.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|346645724|gb|AEO38349.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|384390321|gb|AFH79391.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes 07PF0776]
gi|404218362|emb|CBY69726.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|404221227|emb|CBY72590.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|404224088|emb|CBY75450.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|404226997|emb|CBY48402.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404229875|emb|CBY51279.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404232752|emb|CBY54155.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404235687|emb|CBY57089.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|404238592|emb|CBY59993.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|404245149|emb|CBY03374.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|406360614|emb|CBY66887.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|424012871|emb|CCO63411.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
Length = 357
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+A L LP+E+ S D P + L E + L
Sbjct: 289 ENA-AINAEYVGYATPNAKAVEL--LPKEI-----SSDERF---YPDMDELNNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|420335058|ref|ZP_14836674.1| putrescine-binding periplasmic protein [Shigella flexneri K-315]
gi|391266552|gb|EIQ25501.1| putrescine-binding periplasmic protein [Shigella flexneri K-315]
Length = 370
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVATGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|255521833|ref|ZP_05389070.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J1-175]
Length = 287
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 62 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 118
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + VAV +S +
Sbjct: 119 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLL--------MADNEAGVAVTFSGEA 170
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 171 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 218
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+A L LP+E+ S D P + L E + L
Sbjct: 219 ENA-AINAEYVGYATPNAKAVEL--LPKEI-----SSDERF---YPDMDELNNLEVYDNL 267
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 268 GKRMLSYYNELFLEFK 283
>gi|226324583|ref|ZP_03800101.1| hypothetical protein COPCOM_02367 [Coprococcus comes ATCC 27758]
gi|225207031|gb|EEG89385.1| ABC transporter, solute-binding protein [Coprococcus comes ATCC
27758]
Length = 627
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 15/189 (7%)
Query: 58 KRLIEPIAGAE-DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSK 116
+R+IE AE + D + + + Y+ ++ A DP K ++ PY WGT+ I Y K+
Sbjct: 365 QRMIENDLLAEINWDNIPNIKNIGQTYMDQSKA--FDPENK-YSVPYCWGTVGILYNKTM 421
Query: 117 FRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKI 175
+ PI+ W LW P+ I M +S R+ G LKY+G S NS ++D L A +
Sbjct: 422 VDE----PIDSWSVLWDPKYKDSILMQDSVRDAFGVTLKYLGYSLNSTDLDELNEAKNLL 477
Query: 176 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGAS 235
Q+ L QA + D K G + + V +S + + K N+ V+PK G++
Sbjct: 478 IKQKPLV----QAYVVDQVRD-KMIG-NEAAIGVIYSGEAIYTQKENPNLEYVIPKEGSN 531
Query: 236 LWADLWAIP 244
+W D W IP
Sbjct: 532 IWIDSWVIP 540
>gi|429048944|ref|ZP_19113597.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
gi|427304345|gb|EKW67002.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
Length = 370
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLIPKPENLEKLKSCGVSFLDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|323694111|ref|ZP_08108290.1| spermidine/putrescine ABC transporter [Clostridium symbiosum
WAL-14673]
gi|323501828|gb|EGB17711.1| spermidine/putrescine ABC transporter [Clostridium symbiosum
WAL-14673]
Length = 645
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
E DP +++ PY WGT+ I Y + L + W DLW P G I M +S R+
Sbjct: 406 EFDPEN-LYSVPYTWGTVGILYNTKTIEERGLPVPKKWSDLWNPAYKGEILMQDSVRDAF 464
Query: 151 GSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
LK G S N+ NI +LQ A + Q+ L QA + D K G G+ + V
Sbjct: 465 MVALKARGYSMNTENINELQEAKADLIAQKPLV----QAYVIDQVRD-KMIG-GEAALGV 518
Query: 210 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP 263
+S ++L + + N + V+P+ G +LW D W IPA ++ +
Sbjct: 519 IFSGEMLYIQEEVENQNLDYSLEYVIPEEGTNLWIDSWVIPADAKNKENA---------- 568
Query: 264 LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPA 323
+WI F + AL E I A+P+ K +ELL + + P
Sbjct: 569 --EKWINFLCRPDIALK-NFEYITYATPN-------KAAKELLDEDMQNNKAVF---PDM 615
Query: 324 EILARCEFLEPLSEATLSDYEWL 346
+ L CE L + T + Y L
Sbjct: 616 DQLENCEVYRYLGDETDAVYNNL 638
>gi|428318683|ref|YP_007116565.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428242363|gb|AFZ08149.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 376
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 87/185 (47%), Gaps = 26/185 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW--RPELAGRISMVNSPREVI 150
DP G ++ P WGT + Y + ++ EDW LW + ELA R+++ N REV+
Sbjct: 148 DP-GNRYSVPVSWGTTGLIYNSEQLKEEP----EDWDYLWQHKQELAKRMTLANDVREVM 202
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G+ L+ +G S NS N + QV + L L F + + GD+ VA+
Sbjct: 203 GAALRMLGYSLNSTNQE-QVK----QAYEKLVELKPAIASFTTDAWRPQMLTGDLKVAMC 257
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWI 269
+SSD + + VVPKSG+SLW D IP + P+P ++WI
Sbjct: 258 YSSDANEVIPDNDKLRYVVPKSGSSLWTDTLVIPKGA-------------PNPEAAYKWI 304
Query: 270 EFCLQ 274
F LQ
Sbjct: 305 NFMLQ 309
>gi|384219733|ref|YP_005610899.1| hypothetical protein BJ6T_60570 [Bradyrhizobium japonicum USDA 6]
gi|354958632|dbj|BAL11311.1| hypothetical protein BJ6T_60570 [Bradyrhizobium japonicum USDA 6]
Length = 375
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 53 SFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAY 112
++ +++++ I D+ LS+ W V R G DP G ++AA Y WGT I Y
Sbjct: 92 AYFLQRQIKANIFQKLDKSKLPNLSNAWPVVTER--LGIYDP-GNVYAANYMWGTTGIGY 148
Query: 113 KKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN 165
+K ++ A I+ W +++PE + + M++S ++ + L Y+G NS
Sbjct: 149 NVAKVKQILGADAKIDSWDIVFKPENLAKFKDCGVHMLDSADDIFPAALNYLGLDPNSTK 208
Query: 166 -IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 223
DL+ A + A + R F S+ YL A G++ VGWS D++ A R +
Sbjct: 209 PADLEKAADVV------AKVRPSVRKFHSSEYLSALATGEICFVVGWSGDIMQARARAAE 262
Query: 224 -----NVAVVVPKSGASLWADLWAIPAASR 248
+ +PK GA ++ D AIPA ++
Sbjct: 263 AKSGIEIGYTIPKEGAQMFFDNLAIPADAK 292
>gi|84683820|ref|ZP_01011723.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84668563|gb|EAQ15030.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
Length = 361
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWR 133
+ + W V R D + DP G+ +A Y WGT I K + + AP + W ++
Sbjct: 101 IENMWDVVSTRTD--KYDPGGE-YAINYMWGTTGIGINTGKVAEVLGDDAPTDSWALVFD 157
Query: 134 PELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA 188
P +++ +++P E+I + L Y+G +S++ D+ V++ + +A
Sbjct: 158 PANMEKLAECGVHFLDAPAEMIPAALNYIGEDPDSHDPDVIA-----KVEEVYSGIAPYI 212
Query: 189 RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWA 242
+ F S+ Y++A GD+ VAVGWS D+L A R + + VVPK GA +W D A
Sbjct: 213 QKFHSSEYIEALANGDICVAVGWSGDILQARDRAAEADNGNVIEYVVPKEGAQMWFDQMA 272
Query: 243 IPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQ 274
IP V P+P H+++ F +
Sbjct: 273 IP-------------VDAPNPEGAHKFLNFIMD 292
>gi|392978294|ref|YP_006476882.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. dissolvens SDM]
gi|392324227|gb|AFM59180.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 370
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 30/262 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPENK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y W T I + K K L P ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGFNVDKV-KAALGPDVKLDSWDVVLKPENLAKLKSCGVSFLDAPEEIFATVL 191
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NSN D G + L L R F S+ Y+ GD+ VA+GW+ D
Sbjct: 192 NYLGKDPNSNKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGD 247
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
V A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 248 VWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAH 307
Query: 267 --QWIEFCLQTARALPFKQEVI 286
+ + +LP E I
Sbjct: 308 ISDHVYYANGNKASLPLISEEI 329
>gi|429215499|ref|ZP_19206659.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
gi|428153906|gb|EKX00459.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
Length = 361
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G + PY WGT I Y +K ++ + I+ W L+ PE ++S ++SP
Sbjct: 117 DP-GNKHSVPYLWGTNGIGYNVAKVKQVLGVDRIDSWAVLFEPENIKKLSACGVAFMDSP 175
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E+I SVL Y+G NS N D A K LA + F S+ Y+ G++
Sbjct: 176 DEMIPSVLNYLGLDPNSTNPADYPKAEAK------LAAVRPYVTYFHSSKYISDLANGNI 229
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
VA G+S DV A R +A +PK GA+LW DL AIP+
Sbjct: 230 CVAFGYSGDVFQAAARAREAKNGIEIAYAIPKEGANLWFDLMAIPS 275
>gi|376262419|ref|YP_005149139.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
gi|373946413|gb|AEY67334.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
Length = 349
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP + ++ PY WGT+ I Y K+ ++ P+E W LW + +I M++S R+ IG
Sbjct: 122 FDPDNE-YSVPYMWGTVGIIYNKTMVKE----PVESWNILWDKKYDKQIFMLDSQRDSIG 176
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK +G S N+ N +L+ A ++ Q+++ QA + D G G +AV
Sbjct: 177 VTLKKLGYSLNTKNKEELEKAKNELIKQKDIV----QAYVGDEVKDKMIMGEG--ALAVV 230
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
WS D + + ++ +PK G++LW D IP+ ++ + + ++I
Sbjct: 231 WSGDAVYMKSQNKDLEYAIPKEGSNLWFDSMVIPSTAKHQKEA------------EEFIN 278
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F T AL + G S E KL LLK I P E + CE
Sbjct: 279 FMCDTEIALENTNYI--GYSTPQTEAKK-KLDPVLLKD--------IAAYPTDEQMKDCE 327
Query: 331 FLEPLSEATLSDYE 344
L +A++ DY+
Sbjct: 328 VFIDL-DASIKDYD 340
>gi|398878302|ref|ZP_10633427.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398882495|ref|ZP_10637462.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198647|gb|EJM85601.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398200559|gb|EJM87470.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 365
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W ++ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWSAVFEPENIKKLQSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
+A+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 234 CIAIGFSGDMFQARNRAAEAKKGVNIAYTIPKEGGALWFDMLAIPKDS 281
>gi|374331995|ref|YP_005082179.1| putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
gi|359344783|gb|AEV38157.1| Putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
Length = 368
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V S+LS I+ + + + D+D L + W V R + D ++
Sbjct: 80 DIVVPTGSFLSRQIQAGVFQKL----DKDTLPNLKNMWSVVSDRTSIYDPD---NAYSIN 132
Query: 103 YRWGTMVIAYK-KSKFRKHNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y ++ ++ + P++ W+ ++ PE+ + I M+++P E+I + L +
Sbjct: 133 YMWGTTGIGYNVEAAAKRLDGKPVDSWEIIFNPEILAKFQDCGIHMLDAPTELIPAALNH 192
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSS 213
+G + +S++ K +++ LL + F S+ Y+ A GD+ +A+GWS
Sbjct: 193 LGLNPDSHD--------KAEIEKAAELLKTIRPYVQKFHSSEYINALANGDICLAIGWSG 244
Query: 214 DVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
DV A R + V ++PK GA +W D AIP
Sbjct: 245 DVFQARDRAAEADNGVTVNYIIPKEGALMWFDQMAIPT 282
>gi|300022947|ref|YP_003755558.1| family 1 extracellular solute-binding protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524768|gb|ADJ23237.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans ATCC 51888]
Length = 370
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A Y WGT I Y K ++ AP++ W +++PE+ + + M+++P
Sbjct: 126 DP-GNDYAINYMWGTTGIGYNIGKVKERMADAPVDSWDLIFKPEILAKFKDCGVMMLDAP 184
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
+++ + L Y+G NS+ D++ AG + + + F S+ Y+ A GD+
Sbjct: 185 DDILPAALNYLGLDPNSSKPEDIEKAGALMEKVRPFV------QKFHSSEYINALANGDI 238
Query: 206 WVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+AVG+S D+L A K + +PK GA +W D AIPA ++
Sbjct: 239 CIAVGYSGDILQARTRAQEAKNGQEIGYSLPKQGAQMWFDEMAIPADAK 287
>gi|420369175|ref|ZP_14869900.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
gi|391321501|gb|EIQ78224.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
Length = 370
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
G+ DP K +A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGADAPVNSWDLILKPENLEKLKSCGVSF 179
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
+++P EV +VL Y+G NS D G + L L R F S+ Y+
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLAN 235
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 236 GDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|260565904|ref|ZP_05836374.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4
str. 40]
gi|260155422|gb|EEW90502.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4
str. 40]
Length = 374
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++A Y WGT I Y K+K ++ I+
Sbjct: 108 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSANYMWGTTGIGYNKAKIKEALGTDTIDS 164
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 165 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 217
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 218 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 277
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 278 LIWFDQMAIPADAK 291
>gi|333898571|ref|YP_004472444.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333113836|gb|AEF20350.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 364
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 144
E + G +A PY WGT I Y +K ++ + I+ W L+ P+ + +S ++
Sbjct: 117 ETNDPGNQYAVPYLWGTNGIGYNVAKVKEVLGVDKIDSWAVLFEPQNMKKLASCGVSFMD 176
Query: 145 SPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
S EVI SVL Y+G NS Q A + L + F S+ Y+ G+
Sbjct: 177 SADEVIPSVLNYLGLDPNS-----QSADDYAKAEAKLMEVRPYISYFHSSKYISDLANGN 231
Query: 205 VWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
+ VA G+S DVL A R + +A +PK GA+LW D+ AIP
Sbjct: 232 ICVAFGYSGDVLQAADRAAEAGKGVEIAYAIPKEGANLWFDMLAIP 277
>gi|443700412|gb|ELT99374.1| hypothetical protein CAPTEDRAFT_95386, partial [Capitella teleta]
Length = 329
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPR 147
G + PY WGT I Y K+ K AP++ W + PE + ++ +++P
Sbjct: 85 EGNTYGIPYLWGTTGIGYNKAAVEKVLGKDAPVDSWALILEPENMKKLQKCGVAFLDAPS 144
Query: 148 EVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
EV+ SV+ Y+G +S L++ K +V++ + +A ++S L GD+ V
Sbjct: 145 EVLPSVMTYLGIPGDS----LKMGDYKKAVER-MKAVAPYITYYNSVRSLSDLANGDICV 199
Query: 208 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A+GWS D++ A R ++ VVPK GA +W D+ AIP S+
Sbjct: 200 ALGWSGDMMMARDRAKEANNGLDIRYVVPKEGAPMWFDMLAIPKDSK 246
>gi|398968596|ref|ZP_10682419.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398143680|gb|EJM32551.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 362
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 74 KCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLW 132
K L K L +ND G + PY WGT I Y K + + I+ W L+
Sbjct: 104 KNLDPKLLELLEKNDPGNQH------SVPYLWGTNGIGYNVDKVKAVLGIDHIDSWAVLF 157
Query: 133 RPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQ 187
PE + +SM++S EV ++L YMG S N + ++ L +
Sbjct: 158 EPENLKKLTQCGVSMMDSADEVFPAILNYMGMDPRSENPE-----DYKKAEEKLLSIRPY 212
Query: 188 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 241
F S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL
Sbjct: 213 ITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLL 272
Query: 242 AIPA 245
AIPA
Sbjct: 273 AIPA 276
>gi|417711617|ref|ZP_12360616.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
gi|333008839|gb|EGK28299.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
Length = 370
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S ++P EV +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFQDAPEEVFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|169824263|ref|YP_001691874.1| spermidine/putrescine ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
gi|167831068|dbj|BAG07984.1| spermidine/putrescine ABC transporter ATP-binding protein
[Finegoldia magna ATCC 29328]
Length = 341
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 27/255 (10%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK + Y D+V D IK+ ++E I ++ + FK + ++K
Sbjct: 62 YMKVKEGGSNY---DVVVPSDYMAEKMIKQGMLEKIDYSKIPN-FKYIDQRFK------- 110
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ DP+ + + PY WGT+ I Y K+K ++ ++ W LW + I M+NS R+
Sbjct: 111 NLDYDPKNE-YTVPYMWGTVGILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRD 165
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
+G LK +G S NS N +L+ A + Q++L L A L D T D +
Sbjct: 166 TLGVALKRLGYSMNSRNEAELEKAKQSLIKQKDLVL----AYLVDETKTQMVNEEAD--L 219
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI--PAASRLETKQIGGRVRGP--SP 263
AV +S D + + N+ V+PK G++LW D AI A ++ ++ + P +
Sbjct: 220 AVMYSGDAIVSKGENENLEYVIPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAK 279
Query: 264 LIHQWIEFCLQTARA 278
L ++I + L + +A
Sbjct: 280 LNAEYIGYSLPSTQA 294
>gi|300813078|ref|ZP_07093456.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313123351|ref|YP_004033610.1| spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|422845339|ref|ZP_16892049.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
gi|300495919|gb|EFK31063.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312279914|gb|ADQ60633.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|325684511|gb|EGD26675.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 360
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 37/259 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y +K I+ W DLW+ + G+I +V+S R+++G L MG
Sbjct: 134 YSVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMG 190
Query: 159 ASYN-SNNIDLQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N+ L+VA K+ + +N+ A++A++ +++ + + W+ V +S +
Sbjct: 191 YSMNDTNSAHLKVAKAKLDKIGKNVKAIVADELKMYMVQN--------EAWIGVTYSGEA 242
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ + S++ VVP G++LW D IP + +++I F L+
Sbjct: 243 ATMMDQDSHIHYVVPAQGSNLWFDNIVIPKTCK------------NKEAAYKFINFMLEP 290
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E I ++P+ L LP+ + + K PP + E L
Sbjct: 291 KNAAQ-NAEYIGYSTPNTAAQKL--LPKSVREDKQF--------YPPMSTVKNLEVYRDL 339
Query: 336 SEATLSDYEWLVADLQKPA 354
+ + +Y L + + A
Sbjct: 340 PSSKVQEYNDLFLEFKMYA 358
>gi|238789658|ref|ZP_04633441.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
gi|238722211|gb|EEQ13868.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
Length = 369
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + P+ W + +PE + +S +++
Sbjct: 123 DPENK-YAIPYLWATTGIGYNVEKVKAALGTDVPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS +Q + L L R F S+ Y+ GD+
Sbjct: 182 PSEIFATVLNYLGKDPNS----IQASDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VAVGW+ DV+ A R NVA +PK GA + D++A+P+ ++
Sbjct: 238 CVAVGWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|398840193|ref|ZP_10597431.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398111211|gb|EJM01101.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 362
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ +K + ++ +W K L K L +ND G + P
Sbjct: 74 DVVVPSNHFLARQVKAGAFLKLDRSQLPNW-KNLDPKLLALLEKNDPGNEH------SVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W + P+ + +SM++S EV +VL Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGIDRIDSWAVFFEPQNLKKLSQCGVSMMDSADEVFPAVLNY 186
Query: 157 MGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
MG S N D + A K L + F S+ Y+ GD+ VA G+S DV
Sbjct: 187 MGMDPRSENPEDFKKAEAK------LMTIRPYITYFHSSKYVSDLANGDICVAFGYSGDV 240
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
A R N+A +PK G++LW DL AIPA
Sbjct: 241 FQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|383190431|ref|YP_005200559.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|371588689|gb|AEX52419.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
Length = 369
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 27/222 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y+ NS A +L L L R F S+ Y+ GD
Sbjct: 182 PAEIYATVLNYLHLDPNSTK-----ASDYTGAANDLLLKLRPNIRYFHSSQYINDLANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRL--ETKQIGG 256
+ VA+GW+ DV+ A R NVA +PK GA + D++AIPA ++ E Q
Sbjct: 237 ICVAIGWAGDVMQAANRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAKNLDEAYQFLN 296
Query: 257 RVRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 293
+ P + I + + A P E + PG P A
Sbjct: 297 YLMEPKVIAQISNTVYYASGNKAATPLVNEDVRNNPGIYPPA 338
>gi|417389662|ref|ZP_12153396.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
gi|353621258|gb|EHC71130.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
Length = 339
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|409249324|ref|YP_006885156.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416724823|ref|ZP_11845207.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|320085152|emb|CBY94939.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|323243138|gb|EGA27158.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
Length = 353
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 107 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 165
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 166 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 221
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 222 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 270
>gi|237730837|ref|ZP_04561318.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. 30_2]
gi|365105624|ref|ZP_09334773.1| putrescine-binding periplasmic protein [Citrobacter freundii
4_7_47CFAA]
gi|226906376|gb|EEH92294.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. 30_2]
gi|363643138|gb|EHL82462.1| putrescine-binding periplasmic protein [Citrobacter freundii
4_7_47CFAA]
Length = 370
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
G+ DP K +A PY W T I Y K + AP+ W + +PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGPDAPVNSWDLILKPENLEKLKSCGVSF 179
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
+++P EV +VL Y+G NS D G + L L R F S+ Y+
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLAN 235
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
GD VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 236 GDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|254506754|ref|ZP_05118894.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
gi|219550335|gb|EED27320.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
Length = 344
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 33/252 (13%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP + ++ PY WG I+Y +S + PI W LW + A ++ +++ R+V G
Sbjct: 117 DPSNR-YSLPYIWGVTGISYNESLVEE----PITKWAQLWDAKYAQQVMLIDDIRDVFGM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
LK G S NSNN + ++ ++L L + L++S + G+ + + W+
Sbjct: 172 ALKLNGHSINSNN-EQEIK----QAYESLVALKDNVLLYNSDAPQMPYVAGETALGMQWN 226
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFC 272
+ M+ + V+P+ GA LW D + IP+ S+ L HQ+I F
Sbjct: 227 GNAYQGQAEMAELKFVMPEEGAVLWMDNFTIPSGSQ------------NKALAHQFIRFM 274
Query: 273 LQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFL 332
Q + + E++ +++ + L + LK + P E + + EF+
Sbjct: 275 YQPQQ----QAEIVNSLGYASVTQSGRALLVDELKNNATI-------FPSVEDIQKGEFI 323
Query: 333 EPLSEATLSDYE 344
+ TL+ YE
Sbjct: 324 NDVGSETLAVYE 335
>gi|401678958|ref|ZP_10810908.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
gi|400213809|gb|EJO44745.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
Length = 370
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y W T I Y K K L P ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKV-KAALGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVL 191
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NSN D G + L L R F S+ Y+ GD+ VA+GW+ D
Sbjct: 192 NYLGKDPNSNKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGD 247
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
V A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 248 VWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAH 307
>gi|401762953|ref|YP_006577960.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174487|gb|AFP69336.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 370
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 30/262 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y W T I Y K K L P ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKV-KAALGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVL 191
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NSN D G + L L R F S+ Y+ GD+ VA+GW+ D
Sbjct: 192 NYLGKDPNSNKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGD 247
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
V A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 248 VWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307
Query: 267 --QWIEFCLQTARALPFKQEVI 286
+ + ++P E I
Sbjct: 308 ISDHVYYANGNKASVPLVSEAI 329
>gi|251789985|ref|YP_003004706.1| putrescine ABC transporter subunit periplasmic-binding protein
[Dickeya zeae Ech1591]
gi|247538606|gb|ACT07227.1| extracellular solute-binding protein family 1 [Dickeya zeae
Ech1591]
Length = 369
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 110/252 (43%), Gaps = 43/252 (17%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 143
E DP G +A PY W T I Y K + AP+ W + +PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
++P E+ +VL Y G + NS + K + L L N R F S+ Y+ G
Sbjct: 180 DAPAEIYATVLNYQGKNPNSAT---EADYTKDATDLLLKLRPN-IRYFHSSQYINDLANG 235
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIGG 256
D+ VA+GW+ DV+ A R N++ +PK GA + D++AIP A L++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSA---- 291
Query: 257 RVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNL 316
+Q++ + L K EVI S K L+K + + N+
Sbjct: 292 ---------YQFLNYLL--------KPEVIANVSNHVYYANPNKEATALVKDEVRNNPNI 334
Query: 317 IVGVPPAEILAR 328
PPA+I A+
Sbjct: 335 ---YPPADIRAK 343
>gi|423099912|ref|ZP_17087619.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
gi|370793645|gb|EHN61478.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
Length = 357
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K I G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNIDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+ E + LP+E+ S D P + L E + L
Sbjct: 289 ENA-AINAEYVGYATPN--EKAVKLLPKEI-----SSDERF---YPDMDELNNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|359792822|ref|ZP_09295616.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359251015|gb|EHK54425.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 366
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 20/185 (10%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRP 134
+S+ W V R + D ++ + WGT+ I Y K ++ + ++ W ++P
Sbjct: 107 ISNMWDVVNERVAKFDSD---NAYSVNWMWGTVGIGYNVDKVKEALGVDKVDSWDVFYKP 163
Query: 135 E----LAG-RISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR 189
E LAG + +++SP ++I + L Y+G S S + + V++ L L R
Sbjct: 164 ENLAKLAGCGVYVLDSPSDIIPTTLNYLGLSPESTS-----SEDFAKVEETLLALRPHIR 218
Query: 190 LFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAI 243
F S+ Y+ A GD+ +A+GWS DV A R + V V+PK GA +W D AI
Sbjct: 219 KFHSSEYINALANGDICLAIGWSGDVFQARDRAAEADQGVVVDYVIPKEGAEMWFDQMAI 278
Query: 244 PAASR 248
PA ++
Sbjct: 279 PADAK 283
>gi|72160685|ref|YP_288342.1| polyamine-binding lipoprotein [Thermobifida fusca YX]
gi|71914417|gb|AAZ54319.1| putative polyamine-binding lipoprotein [Thermobifida fusca YX]
Length = 412
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 96 GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLK 155
G + PY G IAY + + I KDLW PE GR+ M+ P+E+ L
Sbjct: 168 GNQYTVPYASGITGIAYDPERVGRE----ITSIKDLWDPEFKGRVGMMRDPQEISNFALL 223
Query: 156 YMG-ASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y G A +S D + A + Q++ ++ R + Y++ GD+W+ + WS D
Sbjct: 224 YNGVAPEDSTPEDWEAAAEVLKKQRDDGIV----RAYYEQDYIQPLTNGDIWITMAWSGD 279
Query: 215 VLPA-VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ + +N+ V+P+ GA+LW D IP ++
Sbjct: 280 IYQVNAEEGTNLKFVIPEEGATLWTDNLTIPITAQ 314
>gi|290893772|ref|ZP_06556752.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404407260|ref|YP_006689975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2376]
gi|290556721|gb|EFD90255.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404241409|emb|CBY62809.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2376]
Length = 357
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKQMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K I G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNIDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+ E + LP+E+ S D P + L E + L
Sbjct: 289 ENA-AINAEYVGYATPN--EKAVQLLPKEI-----SSDERF---YPDMDELNNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|23502475|ref|NP_698602.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella suis
1330]
gi|161619552|ref|YP_001593439.1| hypothetical protein BCAN_A1649 [Brucella canis ATCC 23365]
gi|261755552|ref|ZP_05999261.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3
str. 686]
gi|376275777|ref|YP_005116216.1| extracellular solute-binding protein [Brucella canis HSK A52141]
gi|376281267|ref|YP_005155273.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella suis
VBI22]
gi|384225261|ref|YP_005616425.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella suis
1330]
gi|23348468|gb|AAN30517.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella suis 1330]
gi|161336363|gb|ABX62668.1| Hypothetical protein BCAN_A1649 [Brucella canis ATCC 23365]
gi|261745305|gb|EEY33231.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3
str. 686]
gi|343383441|gb|AEM18933.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella suis 1330]
gi|358258866|gb|AEU06601.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella suis VBI22]
gi|363404343|gb|AEW14638.1| extracellular solute-binding protein family 1 [Brucella canis HSK
A52141]
Length = 367
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++A Y WGT I Y K+K ++ I+
Sbjct: 101 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSANYMWGTTGIGYNKAKIKEALGTDTIDS 157
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 158 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 210
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 211 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 270
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 271 LIWFDQMAIPADAK 284
>gi|417372044|ref|ZP_12142440.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|417382044|ref|ZP_12148128.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417509588|ref|ZP_12174719.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
gi|353606362|gb|EHC60607.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|353616115|gb|EHC67456.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353648906|gb|EHC91680.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
Length = 340
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|51595702|ref|YP_069893.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 32953]
gi|108806618|ref|YP_650534.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Antiqua]
gi|108812810|ref|YP_648577.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Nepal516]
gi|145599638|ref|YP_001163714.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Pestoides F]
gi|149366690|ref|ZP_01888724.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|153950739|ref|YP_001401610.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 31758]
gi|162421714|ref|YP_001606071.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Angola]
gi|165924359|ref|ZP_02220191.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165936192|ref|ZP_02224761.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|166009827|ref|ZP_02230725.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166211526|ref|ZP_02237561.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|167399794|ref|ZP_02305312.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419605|ref|ZP_02311358.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167424261|ref|ZP_02316014.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167469049|ref|ZP_02333753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Yersinia pestis FV-1]
gi|170024955|ref|YP_001721460.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis YPIII]
gi|186894775|ref|YP_001871887.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis PB1/+]
gi|218928481|ref|YP_002346356.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis CO92]
gi|229841290|ref|ZP_04461449.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843393|ref|ZP_04463539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229895767|ref|ZP_04510937.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|229903229|ref|ZP_04518342.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|270487022|ref|ZP_06204096.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294503326|ref|YP_003567388.1| putrescine-binding periplasmic protein [Yersinia pestis Z176003]
gi|384121769|ref|YP_005504389.1| putrescine-binding periplasmic protein [Yersinia pestis D106004]
gi|384125432|ref|YP_005508046.1| putrescine-binding periplasmic protein [Yersinia pestis D182038]
gi|384141038|ref|YP_005523740.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis A1122]
gi|384415312|ref|YP_005624674.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|420546012|ref|ZP_15044054.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|420551322|ref|ZP_15048809.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|420556862|ref|ZP_15053699.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|420562420|ref|ZP_15058583.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|420567439|ref|ZP_15063123.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|420573088|ref|ZP_15068249.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|420578406|ref|ZP_15073065.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|420583781|ref|ZP_15077952.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|420588922|ref|ZP_15082586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|420594243|ref|ZP_15087376.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|420599926|ref|ZP_15092456.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|420605403|ref|ZP_15097357.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|420610751|ref|ZP_15102191.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|420616055|ref|ZP_15106888.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|420621445|ref|ZP_15111640.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|420626498|ref|ZP_15116222.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|420631706|ref|ZP_15120929.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|420636814|ref|ZP_15125505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|420642346|ref|ZP_15130505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|420647544|ref|ZP_15135254.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|420653181|ref|ZP_15140319.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|420658704|ref|ZP_15145282.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|420663998|ref|ZP_15150017.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|420668962|ref|ZP_15154515.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|420674289|ref|ZP_15159368.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|420679845|ref|ZP_15164402.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|420685101|ref|ZP_15169109.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|420690277|ref|ZP_15173691.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|420696075|ref|ZP_15178772.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|420701483|ref|ZP_15183371.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|420707437|ref|ZP_15188236.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|420712778|ref|ZP_15193045.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|420718189|ref|ZP_15197781.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|420723771|ref|ZP_15202593.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|420729368|ref|ZP_15207586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|420734446|ref|ZP_15212171.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|420739919|ref|ZP_15217101.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|420745304|ref|ZP_15221816.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|420751046|ref|ZP_15226754.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|420756368|ref|ZP_15231339.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|420762171|ref|ZP_15236104.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|420767417|ref|ZP_15240838.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|420772395|ref|ZP_15245313.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|420777841|ref|ZP_15250166.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|420783361|ref|ZP_15255003.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|420788694|ref|ZP_15259708.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|420794161|ref|ZP_15264645.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|420799283|ref|ZP_15269250.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|420804630|ref|ZP_15274064.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|420809886|ref|ZP_15278819.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|420815566|ref|ZP_15283914.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|420820764|ref|ZP_15288616.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|420825852|ref|ZP_15293170.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|420831629|ref|ZP_15298392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|420836477|ref|ZP_15302761.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|420841626|ref|ZP_15307426.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|420847242|ref|ZP_15312495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|420852680|ref|ZP_15317268.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|420858176|ref|ZP_15321956.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|421762784|ref|ZP_16199581.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
gi|51588984|emb|CAH20601.1| ABC type periplasmic putrescine/spermidine binding protein, potF
[Yersinia pseudotuberculosis IP 32953]
gi|108776458|gb|ABG18977.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Nepal516]
gi|108778531|gb|ABG12589.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Antiqua]
gi|115347092|emb|CAL19984.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CO92]
gi|145211334|gb|ABP40741.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Pestoides F]
gi|149291064|gb|EDM41139.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|152962234|gb|ABS49695.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pseudotuberculosis IP 31758]
gi|162354529|gb|ABX88477.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis Angola]
gi|165915806|gb|EDR34414.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|165923419|gb|EDR40551.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165991223|gb|EDR43524.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166207297|gb|EDR51777.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|166962346|gb|EDR58367.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050502|gb|EDR61910.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057110|gb|EDR66873.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169751489|gb|ACA69007.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis YPIII]
gi|186697801|gb|ACC88430.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis PB1/+]
gi|229678999|gb|EEO75102.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|229689740|gb|EEO81801.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697656|gb|EEO87703.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700690|gb|EEO88719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|262361365|gb|ACY58086.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D106004]
gi|262365096|gb|ACY61653.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D182038]
gi|270335526|gb|EFA46303.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294353785|gb|ADE64126.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Z176003]
gi|320015816|gb|ADV99387.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342856167|gb|AEL74720.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis A1122]
gi|391429137|gb|EIQ91021.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|391430413|gb|EIQ92134.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|391431954|gb|EIQ93448.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|391445044|gb|EIR05211.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|391445985|gb|EIR06067.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|391449804|gb|EIR09495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|391461597|gb|EIR20195.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|391462641|gb|EIR21136.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|391464758|gb|EIR23010.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|391478057|gb|EIR35020.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|391479255|gb|EIR36070.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|391479435|gb|EIR36226.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|391493548|gb|EIR48888.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|391494646|gb|EIR49849.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|391497235|gb|EIR52109.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|391509359|gb|EIR62991.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|391510142|gb|EIR63704.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|391514371|gb|EIR67479.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|391524903|gb|EIR77080.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|391527667|gb|EIR79561.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|391528645|gb|EIR80444.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|391541013|gb|EIR91591.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|391543171|gb|EIR93528.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|391544275|gb|EIR94507.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|391558283|gb|EIS07178.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|391558950|gb|EIS07785.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|391560061|gb|EIS08733.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|391573487|gb|EIS20537.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|391574043|gb|EIS21001.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|391585571|gb|EIS30965.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|391585813|gb|EIS31176.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|391589491|gb|EIS34379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|391602784|gb|EIS46038.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|391602825|gb|EIS46075.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|391604444|gb|EIS47452.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|391617103|gb|EIS58687.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|391617910|gb|EIS59408.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|391624218|gb|EIS64885.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|391628962|gb|EIS68955.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|391640283|gb|EIS78856.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|391641901|gb|EIS80245.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|391642643|gb|EIS80890.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|391652353|gb|EIS89417.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|391657874|gb|EIS94341.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|391662913|gb|EIS98807.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|391665174|gb|EIT00787.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|391671686|gb|EIT06596.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|391683384|gb|EIT17167.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|391684769|gb|EIT18392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|391685532|gb|EIT19059.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|391697257|gb|EIT29662.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|391700935|gb|EIT32985.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|391702206|gb|EIT34126.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|391711411|gb|EIT42379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|391717995|gb|EIT48287.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|391718497|gb|EIT48738.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|391729174|gb|EIT58194.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|391732267|gb|EIT60859.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|391736137|gb|EIT64190.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|411176990|gb|EKS47005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
Length = 369
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-YAIPYLWATTGIGYNVEKVKAVLGEDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS A S L L R F S+ Y+ GD+
Sbjct: 182 PSEIFATVLNYLGKDPNST----LTADYTGSATDLLLKLRPNIRYFHSSQYINDLANGDI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VAVGW+ D++ A R NVA +PK GA + D++A+P ++
Sbjct: 238 CVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 286
>gi|424923080|ref|ZP_18346441.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304240|gb|EJZ58202.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 362
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ +K + + +W K L K L +ND P+ + P
Sbjct: 74 DVVVPSNHFLARQVKAGAFLKLDREQLPNW-KNLDPKLLALLEKND-----PQNA-HSVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W L+ PE + +SM++S EV ++L Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENIKKLSQCGVSMMDSADEVFPAILNY 186
Query: 157 MGASYNSNNI-DLQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
MG S N D + A K+ S++ + F S+ Y+ GD+ VA G+S D
Sbjct: 187 MGMDPRSENPEDFKKAEAKLLSIRPYITY-------FHSSKYVSDLANGDICVAFGYSGD 239
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
V A R N+A +PK GA+LW DL A+PA
Sbjct: 240 VFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPA 276
>gi|386814709|ref|ZP_10101927.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386419285|gb|EIJ33120.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 344
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 32/246 (13%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DPR + ++ PY WG+ I + + A I W DLW P+ G++ + + REV
Sbjct: 116 DPRNE-YSIPYLWGSTGIGVNAKEI---DPATITAWADLWDPKWEGKLLLTDDVREVFHM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
LK G S NS N D A ++L L +F++ + F GDV + + WS
Sbjct: 172 ALKKNGFSTNSTNPDEIKAA-----YEDLQKLMPNVLVFNADAPREPFLAGDVNLGMIWS 226
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFC 272
+V+ A + ++ + PK GA W D +AIPA + H++I+F
Sbjct: 227 GEVVMAQEENPDIQYIFPKEGAGFWVDSFAIPAGAENVDNA------------HKFIDFM 274
Query: 273 LQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFL 332
L+ +E + ++P+ L LPE++ + V PP + + + EF
Sbjct: 275 LRPEVGQKVVEE-LGYSTPNTASQDL--LPEKVRNNR--------VIFPPTDAVEKGEFQ 323
Query: 333 EPLSEA 338
+ + +A
Sbjct: 324 KDVGDA 329
>gi|93006986|ref|YP_581423.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
K5]
gi|92394664|gb|ABE75939.1| extracellular solute-binding protein, family 1 [Psychrobacter
cryohalolentis K5]
Length = 374
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
++DP K ++ PY WG+ +A + A + W DLWRPE G++ ++N REV
Sbjct: 142 KVDPENK-YSIPYMWGSTGLAINGETV---DPATVNSWNDLWRPEYKGQVMLMNDMREVF 197
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G L +G S NS N D A + L L + F+S + G+ V +
Sbjct: 198 GMALLTLGYSGNSRNPDEIKAA-----YEKLTTLMPNVKTFNSDASRMPYMEGETSVGMT 252
Query: 211 WSSDVLPAVKR-MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
W+ + + A ++++ P GA LW D + IP + Q+ H++I
Sbjct: 253 WNGEAIIANSEGLTSLVYKYPTEGAILWMDNFVIPKNAT----QVDAA--------HKFI 300
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
++ L+ + +E I ASP+ + +P++ +K P+ P ++LA+
Sbjct: 301 DYLLRPENSKIVSEE-IGYASPNIAAREM--MPDD-VKNNPTI-------YPSKDVLAKA 349
Query: 330 EFLEPLSEATLSDYE 344
EF E + + L Y+
Sbjct: 350 EFQEDVGDEALQVYQ 364
>gi|148254930|ref|YP_001239515.1| putrescine ABC transporter periplasmic binding protein
[Bradyrhizobium sp. BTAi1]
gi|146407103|gb|ABQ35609.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. BTAi1]
Length = 368
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +L IK ++ +P+ D+ L++ W V R DP G +AA
Sbjct: 79 DVVVPTAYFLQRQIKAKIFQPL----DKTKLPNLANAWPVVTER--LATYDP-GNQFAAN 131
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT I Y K A I+ W +++PE + + M++S ++ + L
Sbjct: 132 YMWGTTGIGYNVKTIEKILGAGARIDSWDMVFKPENLAKFKDCGVHMLDSADDIFPAALN 191
Query: 156 YMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS DL+ A + + +A R F S+ YL A G++ + VGWS D
Sbjct: 192 YLGLDPNSTKQADLEKAA------EVVGKVAPSVRKFHSSEYLSALATGEICLVVGWSGD 245
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETK 252
++ A R + +PK GA ++ D +AIPA ++ T+
Sbjct: 246 IMQARSRAEEAKNGIEIGYAIPKEGAQMFFDNFAIPADAQHVTE 289
>gi|429081852|ref|ZP_19144947.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
gi|426549418|emb|CCJ70988.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
Length = 370
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP + +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEILKLVAKH------DPDNQ-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAALGKDAPLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D ++ L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD----DYSVAATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R N++ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|417413311|ref|ZP_12158325.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
gi|353625997|gb|EHC74643.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
Length = 348
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGR 257
VA+GW+ DV A R N++ +PK GA + D++A+P A ++ E Q+
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKDEAYQLLNY 299
Query: 258 VRGPSPLIH 266
+ P + H
Sbjct: 300 LLRPDVIAH 308
>gi|417356781|ref|ZP_12132254.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353595222|gb|EHC52527.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
Length = 332
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|383764711|ref|YP_005443693.1| spermidine/putrescine ABC transporter substrate binding protein
[Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381384979|dbj|BAM01796.1| spermidine/putrescine ABC transporter substrate binding protein
[Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 380
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 25/218 (11%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ K+ A A Y DL+ D ++ I++ L++ + D+ L YL
Sbjct: 94 YAKLSAGGANY---DLIQPTDYFVPLLIRQGLLQEL----DKSRLPILDSLDPNYLNL-- 144
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPI-EDWKDLWRPELAGRISMVNSPR 147
+ DP G I++ PY+ GT I + + PI + + DLW P AGR+ M++ R
Sbjct: 145 --DFDP-GNIYSIPYQAGTDAIIVNTAV-----VDPIPQSFADLWNPAYAGRLVMIDDSR 196
Query: 148 EVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
+IG+ L +G N+ N +L+ A K LA LA +LFDS A GDV
Sbjct: 197 AIIGATLLALGYDVNTTNPAELEEAKVK------LAELARGIKLFDSDSPKTALIAGDVD 250
Query: 207 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 244
+ + W+ + + A + + + + P GA LW D +AIP
Sbjct: 251 LGIVWTGEAVIAKREVPSFEYIYPTEGAILWQDNYAIP 288
>gi|378955758|ref|YP_005213245.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|357206369|gb|AET54415.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
Length = 371
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLRLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417325284|ref|ZP_12111298.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
gi|353576540|gb|EHC38965.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
Length = 347
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|365926131|ref|ZP_09448894.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
gi|420267015|ref|ZP_14769433.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
gi|394424140|gb|EJE97319.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
Length = 356
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 38/258 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP G ++ PY WGT+ I Y K+ K + ++ W DLW P I +++ REV+G
Sbjct: 127 FDP-GNKYSLPYFWGTLGIIYN-DKYVK--ASEVKHWDDLWNPRFKNSIMLIDGAREVMG 182
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVA 208
L G S N N+ DLQ A K+ + N+ A+LA++ +++ + +A
Sbjct: 183 LTLNSQGKSVNDTNVKDLQAAYEKLKKLSPNVKAILADEIKVY--------MAQDEAPLA 234
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
V +S + + + ++ ++P+ G+++W D IP ++ ++G + +
Sbjct: 235 VSYSGEAMEMMDNNKHLHYIIPEEGSNIWFDNMVIPRTAK--------NIKGA----YAF 282
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
+ F L+ A E + A+P+ + LP+ + K V P + ++
Sbjct: 283 LNFMLEPKNAAQ-NAEYVAYATPNKAAKKM--LPKSMQDDK--------VMYPTNKTISH 331
Query: 329 CEFLEPLSEATLSDYEWL 346
E + LS+ LS Y L
Sbjct: 332 LEVYDALSQKNLSKYNDL 349
>gi|344343930|ref|ZP_08774796.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
gi|343804541|gb|EGV22441.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
Length = 369
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 46/254 (18%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
EIDP PY WGT + ++K R+ + P++ W ++ P++A R I++
Sbjct: 121 AEIDP-DNAHLVPYMWGTSGLGINRAKVREILGDEIPLDTWALVFDPQIAARLAGCGIAL 179
Query: 143 VNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
++ P EV + L Y+G NS DL A I + R F S+ Y+
Sbjct: 180 LDDPTEVFSAALAYLGKDPNSLERADLDAAAELIKG------VYPHIRYFHSSQYISDLA 233
Query: 202 IGDVWVAVGWSSDVLPAVKRMSN----VAVV--VPKSGASLWADLWAIPAASRLETKQIG 255
GD+ +A G+S DVL A +R V V+ +P+ GA++W D+ AIP +
Sbjct: 234 NGDLCIAHGYSGDVLQAQERADEAGKGVEVIYRIPREGAAMWTDVMAIPRDA-------- 285
Query: 256 GRVRGPSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDT 314
P+P H +I LQ A + + + A+P+ T LV + L+ P
Sbjct: 286 -----PNPEAAHAFIAHLLQPA-VIAAVSDYVYYANPNLEATALV---DAALREDPGI-- 334
Query: 315 NLIVGVPPAEILAR 328
PPAE+ AR
Sbjct: 335 -----YPPAEVKAR 343
>gi|224582727|ref|YP_002636525.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|375118328|ref|ZP_09763495.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|224467254|gb|ACN45084.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|326622595|gb|EGE28940.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
Length = 380
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 134 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 192
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 193 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 248
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 249 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 297
>gi|148550287|ref|YP_001270389.1| extracellular solute-binding protein [Pseudomonas putida F1]
gi|148514345|gb|ABQ81205.1| extracellular solute-binding protein, family 1 [Pseudomonas putida
F1]
Length = 364
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG + NS + + +Q L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLNPNSTD-----PKDYVKAEQKLLAVRPYVTYFHSSKYITDLANGDIC 233
Query: 207 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 234 VAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|398940763|ref|ZP_10669441.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398162380|gb|EJM50576.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 365
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 33/282 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + + + ++ +W K L+ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQELDKSKLPNW-KNLN---PVLLKNASASDPD---NGHAFP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + K ++ + AP W L++PE A + IS ++SP E++ + L
Sbjct: 129 YMWGSIGIGFNPEKVKEVLGSNAPTNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS N D Q+A + + + F S+ Y+ G++ VAVG+S DV
Sbjct: 189 YLGYPVNSQNKD-QIAEAEALFMK----IRPSVAYFHSSKYISDLANGNICVAVGYSGDV 243
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--I 265
L A R V +PK GA + D+ AIP AA+ + P + I
Sbjct: 244 LQAKARAQEAGDKVKVDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAEI 303
Query: 266 HQWIEFCLQTARALPFKQEVI---PGASPS-ALETTLVKLPE 303
I + A A P E I PG+ PS A+ TL +P+
Sbjct: 304 TNNIGYSNANAAATPLVDEAIRDDPGSYPSQAVMATLYAIPD 345
>gi|417528396|ref|ZP_12185034.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
gi|353668092|gb|EHD05386.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
Length = 340
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417364520|ref|ZP_12137419.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353596944|gb|EHC53803.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 347
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417347886|ref|ZP_12126976.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|417517138|ref|ZP_12179859.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|417538032|ref|ZP_12190746.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
gi|353577100|gb|EHC39369.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353652358|gb|EHC94212.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|353667371|gb|EHD04907.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
Length = 339
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|325271715|ref|ZP_08138201.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas sp. TJI-51]
gi|324103150|gb|EGC00511.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas sp. TJI-51]
Length = 364
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG + NS N +Q L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLNPNSTN-----PKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDIC 233
Query: 207 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 234 VAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|56414033|ref|YP_151108.1| putrescine ABC transporter periplasmic protein [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|56128290|gb|AAV77796.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
Length = 370
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|225570462|ref|ZP_03779487.1| hypothetical protein CLOHYLEM_06563 [Clostridium hylemonae DSM
15053]
gi|225160659|gb|EEG73278.1| hypothetical protein CLOHYLEM_06563 [Clostridium hylemonae DSM
15053]
Length = 626
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 34/257 (13%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
+ DP K ++ PY WGT+ I Y K + PI+ W LW I M +S R+
Sbjct: 396 QFDPENK-YSVPYTWGTVGILYNKKMVDE----PIDSWSVLWDETYKDSILMQDSVRDAF 450
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G LKY+G S NS ++D A K+ ++Q + QA + D K G + + V
Sbjct: 451 GITLKYLGYSLNSTDLDELEAAKKLLIEQKPLV---QAYVIDQVRD-KMIG-NEAAIGVI 505
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+S + + ++ V+PK G+++W D W IP ++ + ++I
Sbjct: 506 YSGEAIYTQWENPDLEYVIPKEGSNVWIDSWVIPKNAKHKENA------------EKFIN 553
Query: 271 F-CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
F C + F + I ++P+ L++ +E L+ P + PP + L RC
Sbjct: 554 FLCRPDIAKMNF--DYITYSTPNVGGRALIE--DEALRDNP-------IAFPPEKDLERC 602
Query: 330 EFLEPLSEATLSDYEWL 346
E L + + Y L
Sbjct: 603 ETFRFLGDENDAIYNEL 619
>gi|402701746|ref|ZP_10849725.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fragi A22]
Length = 362
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L IK + + + ++ +W K L V L R +A DP G +A P
Sbjct: 74 DVVVPSNHFLGRQIKAGVFQKLDKSQIPNW-KNLD---PVLLARLEAN--DP-GNEYAVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W L+ PE + ++ ++S EV+ S+L Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGIDKIDSWSVLFEPENLKKLKSCGVAFMDSADEVMPSMLNY 186
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
+G S L+ K++ ++ L L F S+ Y+ GD+ +A G+S DV
Sbjct: 187 LGLDARS----LKPEDYKVA-EKKLQPLRPYISYFHSSKYVTDLANGDICIAFGYSGDVY 241
Query: 217 PAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A+ R N+A VVPK G +LW D+ IPA ++
Sbjct: 242 QAIHRAQEAGNGVNIAYVVPKEGGNLWFDMLTIPADAK 279
>gi|260597254|ref|YP_003209825.1| putrescine ABC transporter periplasmic binding protein [Cronobacter
turicensis z3032]
gi|260216431|emb|CBA29533.1| Putrescine-binding periplasmic protein [Cronobacter turicensis
z3032]
Length = 393
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 103 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEILKLVAKH------DPDNK-YAMP 155
Query: 103 YRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + P+ W + +PE + +S +++P E+ +VL
Sbjct: 156 YLWATTGIGYNVDKVKAALGTDVPLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 215
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D +G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 216 YLGKDPNSSKAD-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 271
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R N++ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 272 WQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 330
>gi|298290940|ref|YP_003692879.1| family 1 extracellular solute-binding protein [Starkeya novella DSM
506]
gi|296927451|gb|ADH88260.1| extracellular solute-binding protein family 1 [Starkeya novella DSM
506]
Length = 369
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 27/194 (13%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+ L ++W R DP G +A Y WGT I K ++ P+
Sbjct: 98 DKSKLPNLQYQWPAIAER--LAVYDP-GNEYAVNYMWGTTGIGLNIDKVKERLGDIPLNS 154
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W +++PE+ G+ + M++ P E+I + L+Y+G NS + D++ AG + L
Sbjct: 155 WDIVFKPEILGKLKNCGVYMLDGPEEIIPTALRYLGKDPNSKDPKDIEEAG------KLL 208
Query: 182 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS-----------NVAVVVP 230
+ + FDS+ Y+ A GD+ +A GWS DV A R N+ ++P
Sbjct: 209 MPVRKFIKKFDSSGYINALAGGDICLATGWSGDVFQAKARAEEAAEKTGKPPINIEYIIP 268
Query: 231 KSGASLWADLWAIP 244
K GA +W D +AIP
Sbjct: 269 KEGALMWFDNFAIP 282
>gi|437473908|ref|ZP_20766015.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435224831|gb|ELO06780.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
Length = 383
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 137 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 195
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 196 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 251
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 252 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 300
>gi|16764239|ref|NP_459854.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62179440|ref|YP_215857.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|197362956|ref|YP_002142593.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|205352128|ref|YP_002225929.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207856310|ref|YP_002242961.1| putrescine transporter periplasmic binding protein [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|238913395|ref|ZP_04657232.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|375113763|ref|ZP_09758933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378444354|ref|YP_005231986.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378449260|ref|YP_005236619.1| putrescine ABC transporter periplasmic substrate-binding protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|378698812|ref|YP_005180769.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378983477|ref|YP_005246632.1| putrescine ABC transporter dubstrate binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378988262|ref|YP_005251426.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|416421925|ref|ZP_11689829.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416431442|ref|ZP_11695596.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416441578|ref|ZP_11701790.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416445354|ref|ZP_11704243.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416454072|ref|ZP_11710075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416459284|ref|ZP_11713793.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416467335|ref|ZP_11717352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416480988|ref|ZP_11723044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416489786|ref|ZP_11726398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416500390|ref|ZP_11731461.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416505245|ref|ZP_11733679.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416523164|ref|ZP_11740911.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416530431|ref|ZP_11744957.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416536481|ref|ZP_11748443.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416546337|ref|ZP_11753823.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416550445|ref|ZP_11755980.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416560306|ref|ZP_11761135.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416570264|ref|ZP_11765925.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416578438|ref|ZP_11770558.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416582376|ref|ZP_11772650.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416593687|ref|ZP_11780093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416599414|ref|ZP_11783648.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416604916|ref|ZP_11786537.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416612564|ref|ZP_11791589.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416617975|ref|ZP_11794380.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416634346|ref|ZP_11802511.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416640904|ref|ZP_11805226.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416650149|ref|ZP_11810257.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416663465|ref|ZP_11816202.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416669819|ref|ZP_11819662.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416676218|ref|ZP_11821740.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416689904|ref|ZP_11825666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416707497|ref|ZP_11832595.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416714795|ref|ZP_11838113.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416716573|ref|ZP_11838920.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416730298|ref|ZP_11848549.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416740458|ref|ZP_11854414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416746455|ref|ZP_11857777.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416752325|ref|ZP_11860301.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416760881|ref|ZP_11865089.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416767412|ref|ZP_11869885.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418483765|ref|ZP_13052771.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418491741|ref|ZP_13058249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493962|ref|ZP_13060422.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418500081|ref|ZP_13066480.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418501903|ref|ZP_13068279.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418509720|ref|ZP_13076012.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418526741|ref|ZP_13092710.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418763546|ref|ZP_13319661.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765268|ref|ZP_13321358.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418769432|ref|ZP_13325462.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418773483|ref|ZP_13329467.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779533|ref|ZP_13335433.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784861|ref|ZP_13340697.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418790736|ref|ZP_13346506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418791919|ref|ZP_13347670.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418798868|ref|ZP_13354541.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418803599|ref|ZP_13359217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419728021|ref|ZP_14254989.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419736814|ref|ZP_14263640.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739303|ref|ZP_14266052.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419742482|ref|ZP_14269155.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419790942|ref|ZP_14316608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419794479|ref|ZP_14320091.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421358050|ref|ZP_15808357.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421364722|ref|ZP_15814953.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367512|ref|ZP_15817705.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370304|ref|ZP_15820470.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377749|ref|ZP_15827839.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421382421|ref|ZP_15832468.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421386157|ref|ZP_15836172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421392078|ref|ZP_15842039.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421393082|ref|ZP_15843029.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421398990|ref|ZP_15848894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421404899|ref|ZP_15854735.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421408034|ref|ZP_15857840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421411154|ref|ZP_15860922.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419135|ref|ZP_15868831.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421421415|ref|ZP_15871083.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425409|ref|ZP_15875045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421432308|ref|ZP_15881884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421434533|ref|ZP_15884082.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421438876|ref|ZP_15888370.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446432|ref|ZP_15895844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421450803|ref|ZP_15900173.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421569155|ref|ZP_16014859.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421573492|ref|ZP_16019128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421580051|ref|ZP_16025612.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421584809|ref|ZP_16030316.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421887310|ref|ZP_16318470.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422025028|ref|ZP_16371490.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422030051|ref|ZP_16376285.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427547363|ref|ZP_18926799.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427563384|ref|ZP_18931565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427582316|ref|ZP_18936321.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427604668|ref|ZP_18941164.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427629463|ref|ZP_18946067.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427652696|ref|ZP_18950833.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427660264|ref|ZP_18955780.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427665392|ref|ZP_18960538.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427744530|ref|ZP_18965557.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436637409|ref|ZP_20516058.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436794612|ref|ZP_20522167.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811702|ref|ZP_20530582.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436816074|ref|ZP_20533625.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436839222|ref|ZP_20537542.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436851669|ref|ZP_20542268.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436858431|ref|ZP_20546951.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436865607|ref|ZP_20551574.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436875219|ref|ZP_20557126.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436879091|ref|ZP_20559482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436884912|ref|ZP_20562310.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436896727|ref|ZP_20569483.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436906706|ref|ZP_20575552.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436911343|ref|ZP_20577172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436918580|ref|ZP_20581726.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436930796|ref|ZP_20589021.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436933035|ref|ZP_20589474.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942485|ref|ZP_20595431.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436947926|ref|ZP_20598332.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436963547|ref|ZP_20605824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436969843|ref|ZP_20608758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436977547|ref|ZP_20612325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436995527|ref|ZP_20619252.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437005278|ref|ZP_20622370.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437022867|ref|ZP_20628732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437032170|ref|ZP_20631814.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437041909|ref|ZP_20635814.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437050133|ref|ZP_20640414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437055320|ref|ZP_20643463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437068624|ref|ZP_20650755.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437077584|ref|ZP_20655483.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437086927|ref|ZP_20660936.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437088565|ref|ZP_20661602.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437112201|ref|ZP_20668584.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437124140|ref|ZP_20673211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437134227|ref|ZP_20678651.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437138097|ref|ZP_20680827.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437147716|ref|ZP_20686998.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437156152|ref|ZP_20692077.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437161611|ref|ZP_20695547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437166342|ref|ZP_20697995.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437177620|ref|ZP_20704100.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437185424|ref|ZP_20708998.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437194019|ref|ZP_20710930.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437260873|ref|ZP_20717943.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437267092|ref|ZP_20721058.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437276451|ref|ZP_20726460.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437300328|ref|ZP_20733092.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437311231|ref|ZP_20735826.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437325736|ref|ZP_20740008.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437336472|ref|ZP_20743079.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437356934|ref|ZP_20748005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437420137|ref|ZP_20754514.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437448468|ref|ZP_20759210.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437467937|ref|ZP_20764579.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437489622|ref|ZP_20770407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437512799|ref|ZP_20777354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437537514|ref|ZP_20781772.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437556094|ref|ZP_20784931.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437575498|ref|ZP_20790294.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437595047|ref|ZP_20795806.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437607023|ref|ZP_20800041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437622005|ref|ZP_20804515.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437647434|ref|ZP_20809247.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437659091|ref|ZP_20812018.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437678584|ref|ZP_20817786.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437688682|ref|ZP_20819912.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437712900|ref|ZP_20827276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437732320|ref|ZP_20831575.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437772380|ref|ZP_20835729.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437803977|ref|ZP_20838692.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|438089680|ref|ZP_20860263.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438104700|ref|ZP_20865964.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438114131|ref|ZP_20869907.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|445139775|ref|ZP_21384533.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445152484|ref|ZP_21390867.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445177638|ref|ZP_21397760.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445228210|ref|ZP_21404615.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445327766|ref|ZP_21412766.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445346380|ref|ZP_21418750.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445367420|ref|ZP_21425547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|452120916|ref|YP_007471164.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|16419385|gb|AAL19813.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62127073|gb|AAX64776.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|197094433|emb|CAR59949.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|205271909|emb|CAR36751.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|206708113|emb|CAR32406.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|261246133|emb|CBG23936.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992638|gb|ACY87523.1| putrescine ABC transporter periplasmic substrate-binding protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301157460|emb|CBW16950.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911905|dbj|BAJ35879.1| putrescine ABC transporter dubstrate binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|322616352|gb|EFY13261.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619602|gb|EFY16477.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622702|gb|EFY19547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628614|gb|EFY25401.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631551|gb|EFY28307.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637078|gb|EFY33781.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641723|gb|EFY38359.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644484|gb|EFY41024.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650055|gb|EFY46472.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654152|gb|EFY50475.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658067|gb|EFY54334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663541|gb|EFY59743.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670277|gb|EFY66417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671513|gb|EFY67635.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676869|gb|EFY72936.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682794|gb|EFY78813.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686473|gb|EFY82455.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322713909|gb|EFZ05480.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323196073|gb|EFZ81236.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196781|gb|EFZ81925.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202940|gb|EFZ87974.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209702|gb|EFZ94629.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215183|gb|EFZ99928.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222386|gb|EGA06764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227510|gb|EGA11670.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229861|gb|EGA13984.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233086|gb|EGA17182.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240821|gb|EGA24863.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323248680|gb|EGA32608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251681|gb|EGA35548.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257331|gb|EGA41029.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263906|gb|EGA47424.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267935|gb|EGA51414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271998|gb|EGA55413.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|332987809|gb|AEF06792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|363550811|gb|EHL35137.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363550883|gb|EHL35208.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363556179|gb|EHL40394.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363564802|gb|EHL48843.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363568401|gb|EHL52381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363574981|gb|EHL58840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363575548|gb|EHL59398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|366060306|gb|EHN24570.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366060740|gb|EHN25000.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366063209|gb|EHN27429.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366069548|gb|EHN33671.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366076350|gb|EHN40388.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366077815|gb|EHN41824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366828332|gb|EHN55219.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205349|gb|EHP18864.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|379983026|emb|CCF90743.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|381290488|gb|EIC31753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381299395|gb|EIC40468.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381301603|gb|EIC42659.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381313777|gb|EIC54556.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|392612685|gb|EIW95154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392614781|gb|EIW97225.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392733014|gb|EIZ90220.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392739728|gb|EIZ96860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392741421|gb|EIZ98526.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392752105|gb|EJA09047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392753565|gb|EJA10494.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392753857|gb|EJA10778.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392757049|gb|EJA13940.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392765510|gb|EJA22296.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392769452|gb|EJA26185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392772694|gb|EJA29394.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|395982950|gb|EJH92144.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395986032|gb|EJH95196.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989145|gb|EJH98280.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395998026|gb|EJI07064.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|395998328|gb|EJI07360.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396006856|gb|EJI15817.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396009758|gb|EJI18681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396014776|gb|EJI23661.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396019333|gb|EJI28190.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396024746|gb|EJI33531.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396029164|gb|EJI37903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396029434|gb|EJI38171.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396036643|gb|EJI45302.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396040730|gb|EJI49353.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396046688|gb|EJI55271.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396050699|gb|EJI59221.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396057879|gb|EJI66349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396060284|gb|EJI68730.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396062014|gb|EJI70427.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396065299|gb|EJI73676.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396072104|gb|EJI80419.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|402520530|gb|EJW27872.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402527509|gb|EJW34770.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402527751|gb|EJW35011.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402530781|gb|EJW37995.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414022365|gb|EKT05851.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414022428|gb|EKT05913.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414023991|gb|EKT07396.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414036091|gb|EKT18934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414037519|gb|EKT20288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414040678|gb|EKT23286.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414050707|gb|EKT32869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414051941|gb|EKT34019.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414056183|gb|EKT38021.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414061132|gb|EKT42575.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414066661|gb|EKT47180.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|434957552|gb|ELL51185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434962641|gb|ELL55817.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434964333|gb|ELL57355.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434974190|gb|ELL66578.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434980530|gb|ELL72451.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434986971|gb|ELL78622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434990583|gb|ELL82133.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434994810|gb|ELL86127.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|434996642|gb|ELL87958.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435007074|gb|ELL97931.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435013094|gb|ELM03754.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435015283|gb|ELM05840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435016616|gb|ELM07142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435025588|gb|ELM15719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435030578|gb|ELM20587.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435032451|gb|ELM22395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435042684|gb|ELM32401.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435044090|gb|ELM33788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435048796|gb|ELM38352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435056664|gb|ELM46035.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435058613|gb|ELM47934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435062969|gb|ELM52141.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435070760|gb|ELM59742.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435071618|gb|ELM60558.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435076125|gb|ELM64921.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435080106|gb|ELM68799.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435085173|gb|ELM73727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435095115|gb|ELM83452.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435095274|gb|ELM83592.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435098662|gb|ELM86893.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435103073|gb|ELM91176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435103288|gb|ELM91383.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435116600|gb|ELN04335.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435116879|gb|ELN04593.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435119706|gb|ELN07308.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435120494|gb|ELN08072.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435133819|gb|ELN20975.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435134034|gb|ELN21178.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435136931|gb|ELN24003.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435144668|gb|ELN31500.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435153000|gb|ELN39621.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435155300|gb|ELN41858.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435159477|gb|ELN45798.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435163329|gb|ELN49465.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435173809|gb|ELN59278.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435176244|gb|ELN61634.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435178731|gb|ELN63928.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435183993|gb|ELN68939.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435192975|gb|ELN77478.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435197541|gb|ELN81824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435201339|gb|ELN85251.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435209066|gb|ELN92444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435211472|gb|ELN94574.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435215386|gb|ELN98073.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435229420|gb|ELO10784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435230491|gb|ELO11797.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435231624|gb|ELO12853.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435239890|gb|ELO20323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435241635|gb|ELO21977.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435245463|gb|ELO25550.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435251318|gb|ELO30947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435254229|gb|ELO33632.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435256225|gb|ELO35570.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435270143|gb|ELO48647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435270614|gb|ELO49109.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435273279|gb|ELO51621.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435282427|gb|ELO60045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435287183|gb|ELO64398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435288224|gb|ELO65274.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435303087|gb|ELO79005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435305634|gb|ELO81084.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435316876|gb|ELO89959.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435321996|gb|ELO94337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435329155|gb|ELP00608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|444853073|gb|ELX78145.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444854275|gb|ELX79340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444855893|gb|ELX80932.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444866305|gb|ELX91038.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444878046|gb|ELY02174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444880544|gb|ELY04618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444882367|gb|ELY06333.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|451909920|gb|AGF81726.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 370
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|398975950|ref|ZP_10685976.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398139942|gb|EJM28930.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 365
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLHSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS + D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTDPKDYEKATAK------LLAVRPYVTYFHSSKYIGDLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 234 CVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|241889938|ref|ZP_04777236.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
gi|241863560|gb|EER67944.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
Length = 359
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ + ++ PY WGT+ I Y K+K + E W DLW L I +++ RE++G
Sbjct: 125 FDPKNE-YSIPYFWGTLGILYDKTKVPED--LKFEKWNDLWDARLENNILLIDGAREMMG 181
Query: 152 SVLKYMGASYN-SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
L+ G S N +N ++L +A ++ L LL + +S + WV+V
Sbjct: 182 IALQSEGNSVNDTNEVNLNLA------EKKLELLHPNIKAINSDEKKMLMINNEAWVSVV 235
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+S D ++ N+ +PK G +LW D IP S+ E +++I
Sbjct: 236 FSGDAKSIMEENENMVYALPKEGTNLWFDNIVIPKTSKNEEAA------------YKFIN 283
Query: 271 FCLQTARALPFKQEVIPGASPSA 293
F L+ A E I A+P+
Sbjct: 284 FMLKPENAAK-NSEFIGYATPNG 305
>gi|161614859|ref|YP_001588824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|194451476|ref|YP_002044907.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194468593|ref|ZP_03074577.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736529|ref|YP_002113970.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195874047|ref|ZP_02700356.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197264414|ref|ZP_03164488.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197300890|ref|ZP_02661879.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|198245718|ref|YP_002214842.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389573|ref|ZP_03216184.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204930077|ref|ZP_03221098.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205357766|ref|ZP_02573227.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205358380|ref|ZP_02655841.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205358904|ref|ZP_02665689.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205359760|ref|ZP_02831960.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205360691|ref|ZP_02685577.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|374981583|ref|ZP_09722907.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|375000630|ref|ZP_09724970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|375122921|ref|ZP_09768085.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|379700083|ref|YP_005241811.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383495658|ref|YP_005396347.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386590782|ref|YP_006087182.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
gi|417473704|ref|ZP_12169030.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|161364223|gb|ABX67991.1| hypothetical protein SPAB_02612 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194409780|gb|ACF69999.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194454957|gb|EDX43796.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712031|gb|ACF91252.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630932|gb|EDX49518.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197242669|gb|EDY25289.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197290225|gb|EDY29582.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197940234|gb|ACH77567.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199602018|gb|EDZ00564.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204321071|gb|EDZ06272.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205329670|gb|EDZ16434.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205334766|gb|EDZ21530.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205340175|gb|EDZ26939.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343115|gb|EDZ29879.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347834|gb|EDZ34465.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|321223239|gb|EFX48308.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|323129182|gb|ADX16612.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326627171|gb|EGE33514.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|353075318|gb|EHB41078.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353650107|gb|EHC92566.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|380462479|gb|AFD57882.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|383797826|gb|AFH44908.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
Length = 371
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|418510965|ref|ZP_13077235.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366085214|gb|EHN49104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 370
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|423107544|ref|ZP_17095239.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
gi|376388316|gb|EHT01015.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
Length = 370
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAIP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307
>gi|429103745|ref|ZP_19165719.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
gi|426290394|emb|CCJ91832.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
Length = 370
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEILKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + P+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAALGTDVPLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D +G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R N++ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|445253380|ref|ZP_21409092.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|444889426|gb|ELY12869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 340
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|399518688|ref|ZP_10759642.1| extracellular solute-binding protein [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399113182|emb|CCH36200.1| extracellular solute-binding protein [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 364
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + +L IK + P+ ++ +W K L L +ND G + P
Sbjct: 75 DLVIPSNQFLETQIKAGVFAPLDKSKLPNW-KNLDPVLLGLLEKNDPG------NQYGVP 127
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y +GT++I Y K + + AP+ W +++PE + ++M++SP E+I L
Sbjct: 128 YMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALH 187
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS N V + L + F S Y+ GD+ VA+G+S
Sbjct: 188 YLGLDPNSAN-----PADYDKVTELLLKVRPYVAYFHSAKYMTDIANGDICVAIGYSGSF 242
Query: 216 LPAVKRM---SNVAVV---VPKSGASLWADLWAIPAASR 248
R N V+ +PK GA +W D WAIP +++
Sbjct: 243 YQFANRAKEAGNGVVINWRLPKEGAPIWFDTWAIPKSAQ 281
>gi|438130582|ref|ZP_20873498.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434941649|gb|ELL48063.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 370
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLRLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|426412094|ref|YP_007032193.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426270311|gb|AFY22388.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 365
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDTIDSWGVLFEPENIKKLQSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS + D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTDPKDYEKATAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 234 CVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|398838150|ref|ZP_10595432.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398116712|gb|EJM06470.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 365
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 39/285 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + +P+ ++ +W K L+ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQPLDKSKLPNW-KNLN---PVLLKNASASDPD---NGHAFP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I Y +K ++ AP+ W L++PE A + IS ++SP E++ + L
Sbjct: 129 YMWGSIGIGYNPAKVKEVLGTNAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G NS + K + + AL F S+ Y+ G++ VAVG+S
Sbjct: 189 YLGYPVNSQD--------KAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYS 240
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL 264
DVL A R + +PK GA + D+ AIP AA+ + P +
Sbjct: 241 GDVLQAKARAKEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDII 300
Query: 265 --IHQWIEFCLQTARALPFKQEVI---PGA-SPSALETTLVKLPE 303
+ + + A A P E I PG+ P A+ TL +P+
Sbjct: 301 AEVTNSVGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|398798502|ref|ZP_10557801.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
gi|398100409|gb|EJL90648.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
Length = 369
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPE----LAG-RISMVNS 145
DP G +A PY WGT I Y K + P++ W + +PE L G +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGKDVPLDSWDLVLKPENLEKLKGCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS++ +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAK-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GWS D+L A R ++ +VPK GA + D++AIP ++
Sbjct: 238 CVAIGWSGDILQAKDRADKANNGVHLGYIVPKQGALAFFDMFAIPKDAK 286
>gi|417332548|ref|ZP_12116395.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|353581346|gb|EHC42310.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
Length = 328
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|197247643|ref|YP_002145831.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197211346|gb|ACH48743.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 371
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|402842571|ref|ZP_10890983.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
gi|423102198|ref|ZP_17089900.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|376390094|gb|EHT02781.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|402279513|gb|EJU28298.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
Length = 370
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAIP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH- 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAHI 308
Query: 267 -QWIEFCLQTARALPFKQEVI 286
+ + ++P E I
Sbjct: 309 SDHVYYANGNKASVPLVSEAI 329
>gi|315281477|ref|ZP_07870095.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
gi|313614877|gb|EFR88403.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
Length = 357
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+A L LP+E+ S D P L E + L
Sbjct: 289 ENA-AINAEYVGYATPNAKAVQL--LPKEI-----SSDERF---YPDMNELNNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|401871804|pdb|4GL0|A Chain A, Putative SpermidinePUTRESCINE ABC TRANSPORTER FROM
LISTERIA Monocytogenes
Length = 333
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV G L +G
Sbjct: 108 YSXPYFWGTLGIIYNKEXFPDKNF---DTWNALFDPELKNQILLIDGAREVXGLGLNSLG 164
Query: 159 ASYN-SNNIDLQVAGGKISVQQ-NL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ N+ A++ ++ +L + + + VAV +S +
Sbjct: 165 YSLNDTNKAHLQAARDKLETXTPNVKAIVGDEIKLLXADN--------EAGVAVTFSGEA 216
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 217 AEXLSENEDLEYVIPKDGSNLWFDNXVIPKTA----KNVDG--------AHKFINFXLKP 264
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+A L LP+E+ S D P + L E + L
Sbjct: 265 ENA-AINAEYVGYATPNAKAVEL--LPKEI-----SSDERF---YPDXDELNNLEVYDNL 313
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 314 GKRXLSYYNELFLEFK 329
>gi|392987511|ref|YP_006486104.1| spermidine/putrescine ABC transporter substrate-binding protein
[Enterococcus hirae ATCC 9790]
gi|392334931|gb|AFM69213.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Enterococcus hirae ATCC 9790]
Length = 359
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 144/326 (44%), Gaps = 49/326 (15%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
F K++ Y D+ + + IK++L+ P+ D K L++ + +L
Sbjct: 74 FTKIQQGGTNY---DIAIPSEYMIQKMIKEKLVLPL----DHSKIKGLANIDERFLDL-- 124
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ DP+ ++ PY WGT+ I Y F K I+ W DLW+P+L + +++ RE
Sbjct: 125 --DFDPQN-TYSIPYFWGTLGIVYNDKVFNKE---EIQHWNDLWKPKLRDSLMLIDGARE 178
Query: 149 VIGSVLKYMGASYNSNNID-LQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDV 205
V+G L +G S NS +D L A K++ + N+ A++A++ +++ +
Sbjct: 179 VMGLSLNSLGYSLNSKEMDQLNAAADKLNKLTPNVKAIVADEIKMYMINE--------EA 230
Query: 206 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLI 265
VAV +S + + ++ V+P G++LW D +P ++ + G
Sbjct: 231 SVAVTFSGEAADMMSENEHLHYVIPSEGSNLWFDNIVMPKTAK---NKEGA--------- 278
Query: 266 HQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEI 325
+ +I F L+ A E I ++P+ L LP+E+ SQD P E
Sbjct: 279 YDFINFMLKPENAAQ-NAEYIGYSTPNKKAKAL--LPKEI-----SQDEQF---YPSDET 327
Query: 326 LARCEFLEPLSEATLSDYEWLVADLQ 351
++ E E L L Y L + +
Sbjct: 328 ISHLEVYEDLGPKFLGIYNDLFLEFK 353
>gi|22126728|ref|NP_670151.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis KIM10+]
gi|45441089|ref|NP_992628.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Microtus str. 91001]
gi|21959748|gb|AAM86402.1|AE013887_9 periplasmic putrescine-binding protein of putrescine ABC
transporter [Yersinia pestis KIM10+]
gi|45435948|gb|AAS61505.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
biovar Microtus str. 91001]
Length = 408
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 162 DPDNK-YAIPYLWATTGIGYNVEKVKAVLGEDAPVNSWDLVLKPENLEKLKSCGVSFLDA 220
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS A S L L R F S+ Y+ GD+
Sbjct: 221 PSEIFATVLNYLGKDPNST----LTADYTGSATDLLLKLRPNIRYFHSSQYINDLANGDI 276
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VAVGW+ D++ A R NVA +PK GA + D++A+P ++
Sbjct: 277 CVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 325
>gi|23100612|ref|NP_694079.1| spermidine:putrescine ABC transporter [Oceanobacillus iheyensis
HTE831]
gi|22778845|dbj|BAC15113.1| spermidine:putrescine ABC transporter spermidine:putrescine-binding
protein [Oceanobacillus iheyensis HTE831]
Length = 358
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 45/262 (17%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP----IEDWKDLWRPELAGRISMVNSPR 147
DP + ++ PY WGT+ I + NL P + W DLW P L +I +++ R
Sbjct: 126 FDPNNQ-YSIPYFWGTVGIIFNT------NLLPEGMELTGWHDLWDPALENQILLIDGAR 178
Query: 148 EVIGSVLKYMGASYNSNNID-LQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGD 204
E+IG L +G S N N + L A K+ + N+ A++ ++ ++ + + +
Sbjct: 179 EIIGMGLNSLGYSLNDTNPEHLYQALEKLEELTPNVRAIVGDENKMLMANN--------E 230
Query: 205 VWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL 264
+A+GWS D + + +VP+ G++LW D + IP +R I G
Sbjct: 231 ATIAIGWSGDAADIMGENEAIDYLVPEEGSNLWFDNFVIPKTAR----NIDGA------- 279
Query: 265 IHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE 324
HQ+I F L A E + ++P+ + L +PEE+++ + P E
Sbjct: 280 -HQFINFMLDAEIAAQ-NTEYVSYSTPN--KEALQFMPEEMVEDERF--------YPDPE 327
Query: 325 ILARCEFLEPLSEATLSDYEWL 346
+ R E E L + L+ Y L
Sbjct: 328 LTDRLEVYENLGQRNLAFYNEL 349
>gi|336435037|ref|ZP_08614755.1| hypothetical protein HMPREF0988_00340 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001930|gb|EGN32057.1| hypothetical protein HMPREF0988_00340 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 609
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 41/243 (16%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K + PY WGT+ I Y +K ++ P++ W L+ E AG I M NS R+
Sbjct: 381 FDPENK-YTVPYFWGTLGILYDTTKVKE----PVDSWDVLFNGEYAGEIIMQNSMRDTYM 435
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQN---LALLANQARLFDSTHYLKAFGIGDVWVA 208
+K +G S NSNN D A + V+Q A L ++AR G+ +A
Sbjct: 436 VAMKALGYSLNSNNEDEVNAAHDLLVKQKPDVQAYLVDEAR--------DEVVAGNATMA 487
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
V +S + + ++A V+PK G+++W D W + TKQ Q+
Sbjct: 488 VVYSGEAYLGNQYNEDLAYVIPKEGSNVWLDSWCV-------TKQCDN-----VDAAQQF 535
Query: 269 IEF-CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
++F C + + F E I ++P+ E++++G +D VP +
Sbjct: 536 LDFLCREDVAEMNF--EYIYYSTPN----------EKVIEGLSEEDRANEALVPADDATE 583
Query: 328 RCE 330
CE
Sbjct: 584 NCE 586
>gi|440764387|ref|ZP_20943415.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440769465|ref|ZP_20948423.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440770940|ref|ZP_20949868.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436414553|gb|ELP12481.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436416537|gb|ELP14442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436423512|gb|ELP21323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
Length = 370
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|262041052|ref|ZP_06014271.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041610|gb|EEW42662.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 370
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDI 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV R NV+ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQVANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|145297278|ref|YP_001140119.1| ABC-type putrescine transporter periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142850050|gb|ABO88371.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 361
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVN 144
++DP G +A PY WGT I Y K + + I+ W ++ PE ++S ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNVDKIKDVLGVDKIDSWAVIFEPENMQKLSRCGVAFLD 173
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E+I +VL Y+G NS+ D++ A ++ L + F S+ Y+ G
Sbjct: 174 SADEMIPAVLNYLGLDPNSHKPEDIKRA------EEQLLKVRPYVTYFHSSKYIGDLANG 227
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
D+ VA G+S D+L A R N+A +PK G +LW D+ AIPA
Sbjct: 228 DICVAAGFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMMAIPA 275
>gi|114705308|ref|ZP_01438216.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
gi|114540093|gb|EAU43213.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
Length = 365
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 93 DPRGKIWAAPYRWGT--MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS-----MVNS 145
DP G +A Y WGT + + K K R P+ + L+ PEL +++ M+N+
Sbjct: 120 DP-GNEYAVNYMWGTTGLGLNTKMVKERLGEDQPLNTYDLLFDPELVSKLADCGVYMLNT 178
Query: 146 PREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
EV+ + L Y+G NS N DLQ A + L + R F+S+ Y+ A GD
Sbjct: 179 SEEVVPAALNYLGLDPNSTNPDDLQKA------EDLLLQVKPHIRKFNSSEYITALANGD 232
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
+ +A GWS D+L + R + V+PK GA +W D AIPA
Sbjct: 233 ICMAHGWSGDILQSRDRAKEAGQGVEIQYVIPKEGAVIWVDNMAIPA 279
>gi|407789271|ref|ZP_11136373.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
gi|407207249|gb|EKE77192.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
Length = 416
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G A PY WGT I + K + AP + W ++ P+ + +S +++
Sbjct: 171 DP-GNEHAFPYMWGTTGIGFNPDKVKAVLGADAPTDTWALVFDPKYMSKLSQCGVSFLDA 229
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E++ + L Y+G + NS + + L+ +A + S+ Y+ GD+
Sbjct: 230 PSEILPAALNYLGLNPNSED-----PADYAKAEAMLSKVAPYVTYYHSSKYIDDLANGDI 284
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGR 257
+A+G+S DVL A R V+ V+PK GA +W D+ AIP A + E +
Sbjct: 285 CIAIGFSGDVLQAATRADEAKNGVQVSYVIPKEGAGMWFDMMAIPVDANNADEAYKFLNY 344
Query: 258 VRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 293
+ P+ + + ++ + A A P ++ I PG P+A
Sbjct: 345 MLEPANIARVSNFVSYANGNAAATPLVEDAIRNNPGVYPTA 385
>gi|375259929|ref|YP_005019099.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
oxytoca KCTC 1686]
gi|365909407|gb|AEX04860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca KCTC 1686]
Length = 370
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAIP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH- 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAHI 308
Query: 267 -QWIEFCLQTARALPFKQEVI 286
+ + ++P E I
Sbjct: 309 SDHVYYANGNKASVPLVSEAI 329
>gi|291616867|ref|YP_003519609.1| PotF [Pantoea ananatis LMG 20103]
gi|291151897|gb|ADD76481.1| PotF [Pantoea ananatis LMG 20103]
Length = 369
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVEKVKATLGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS++ +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAK-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GWS D+L A R N+ VPK GA + D+ AIP ++
Sbjct: 238 CVAIGWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAK 286
>gi|126665279|ref|ZP_01736261.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
gi|126629907|gb|EBA00523.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
Length = 348
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 41/239 (17%)
Query: 91 EIDPRGKI-------WAAPYRWGTMVIAYKKSKFRKHNLAP--IEDWKDLWRP--ELAGR 139
IDPR +I + PY WGT+ I Y++ +L P + W DL +P EL G+
Sbjct: 108 HIDPRRRIEFEKAEDFGVPYFWGTIGIVYRQ------DLVPFAVSSWMDLLQPVEELHGK 161
Query: 140 ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYL-- 197
ISM+ ++IG LK +G S NS N D +++ ALL QA ++ YL
Sbjct: 162 ISMIGDRADMIGVALKALGYSLNSTNED--------EMKEAEALLEAQAPAVNTYRYLSL 213
Query: 198 ---KAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS--RLETK 252
A G V +++ ++ D + N+A V+PK G ++W D ++ +AS + E K
Sbjct: 214 NEDSALLTGQVVMSMMYNGDTRMLQEYNDNIAFVLPKEGGNIWTDYLSVLSASHRKAEAK 273
Query: 253 QIGGRVRGP--SPLIHQWIEFC---LQTARALP--FKQEVIPGASPSALETTLV--KLP 302
+ + P + + Q++ + L LP F+ + + S ALE + V +LP
Sbjct: 274 RFINFLNEPEIAARLAQYVYYATPNLAAEALLPVDFRNDPVIYPSGEALENSEVYRRLP 332
>gi|423119457|ref|ZP_17107141.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
gi|376398515|gb|EHT11140.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
Length = 370
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAVLGKDAPLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|157374200|ref|YP_001472800.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3]
gi|157316574|gb|ABV35672.1| extracellular solute-binding protein, family 1 [Shewanella
sediminis HAW-EB3]
Length = 366
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 19/166 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNS 145
DP G +A PY WGT I Y ++K ++ AP++ + ++ P+ A ++S ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNEAKVKEVLGEDAPVDSLELIFNPKYASKLSKCGLSFLDS 179
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ L Y+G NS+ D G++ L + F S+ Y+ GD+
Sbjct: 180 ADEMVPMALIYLGLDPNSSKKDDFKRAGEV-----LEAIRPHITYFHSSRYITDLANGDL 234
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
VAVG+S D+L A R + +PK GA+LW D+ AIPA
Sbjct: 235 CVAVGYSGDILQAATRAEEAENGHVIGYSIPKEGANLWFDMLAIPA 280
>gi|429767047|ref|ZP_19299270.1| putrescine ABC transporter, periplasmic spermidine [Clostridium
celatum DSM 1785]
gi|429182101|gb|EKY23225.1| putrescine ABC transporter, periplasmic spermidine [Clostridium
celatum DSM 1785]
Length = 350
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 34/258 (13%)
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
+G +++ PY GT+ I Y K ++ PI+ W+ +W PE I +++S R+ IG L
Sbjct: 125 QGNVYSLPYMNGTIGIIYNKDIIKE----PIDSWEAMWSPEYKDEIFVLDSQRDAIGMAL 180
Query: 155 KYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
K +G S NS N+ +L+ A + Q+ L ++ + + G+ +A+ WS
Sbjct: 181 KKLGYSINSTNSAELEEAKKALIEQKEL------GTIYGADNVKDLMISGERAIAMIWSG 234
Query: 214 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL 273
+ L +N+ +VPK GA+ W D IP G + I +I F
Sbjct: 235 EGLTLADEYNNLEYIVPKEGANFWIDSLVIPK----------GTANKDAAEI--FINFLC 282
Query: 274 QTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLE 333
A +E I +P+ +E +K +P N P E++ +CE +
Sbjct: 283 AKDSAYRIAEE-IGYTTPN----------KEAMKEQPDSVKNNPGAYMPKEVMDKCEGYK 331
Query: 334 PLSEATLSDYEWLVADLQ 351
L++ L Y+ + D++
Sbjct: 332 YLTQDELQMYDAIWMDVK 349
>gi|400289028|ref|ZP_10791060.1| extracellular solute-binding protein [Psychrobacter sp. PAMC 21119]
Length = 377
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 35/256 (13%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
++DP K ++ PY WG+ +A + A + W DLW P+ G++ + N REV
Sbjct: 145 KVDPENK-YSIPYMWGSTGLAINGDTV---DPATVNSWNDLWDPKYKGQVMLTNDVREVF 200
Query: 151 GSVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G L +G S NS N D ++ A K++ L+ N + F+S + G+ + +
Sbjct: 201 GMALLTLGYSGNSRNPDEIKAAYDKLTT-----LMPN-VKTFNSDATRMPYIEGETSLGM 254
Query: 210 GWSSD-VLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
W+ + V+ + ++++ P GA LW D + IP + KQ+ H++
Sbjct: 255 TWNGEAVMANDEGLTSLVYKYPSEGAILWMDNFVIPKNA----KQVDA--------AHKF 302
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I++ L+ A +E I ASP+ L+ +E ++ P+ P EILA+
Sbjct: 303 IDYLLRPENAKIVSEE-IGYASPNIAARELM---DESVRNNPTI-------YPSQEILAK 351
Query: 329 CEFLEPLSEATLSDYE 344
EF E + + L Y+
Sbjct: 352 AEFQEDVGDEALQVYQ 367
>gi|85058903|ref|YP_454605.1| spermidine/putrescine ABC transporter substrate-binding protein
[Sodalis glossinidius str. 'morsitans']
gi|84779423|dbj|BAE74200.1| putrescine ABC transporter periplasmic component [Sodalis
glossinidius str. 'morsitans']
Length = 369
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-YAVPYMWATTSIGYNVEKVKAVLGKDAPVNSWDLVLKPENLAKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARL-FDSTHYLKAFGIGD 204
P E+ +VL Y+G NS+N A +L L + L F S+ Y+ GD
Sbjct: 182 PFEIYATVLNYLGKDPNSDN-----AANYTGPATDLLLKLRPSILYFHSSQYINDLANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ V +GW DV+ A R N+A +PK GA + D+ AIPA ++
Sbjct: 237 ICVTIGWVGDVMQAANRAKEAKNGVNIAYSIPKEGALAFFDVLAIPADAK 286
>gi|238022429|ref|ZP_04602855.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
gi|237867043|gb|EEP68085.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
Length = 382
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 32/192 (16%)
Query: 96 GKIWAAPYRWGTMVIAYKK---SKFRKHNLAPIEDWKDLWRPELAGR-----ISMVNSPR 147
G +A PY WG +A K +K + P +W ++ PE G+ IS +SP
Sbjct: 139 GNKYAVPYFWGINTLAINKKLVAKALGTDQLPANEWDLVFNPEYTGKLKHCGISFFDSPT 198
Query: 148 EVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E VLKY+G NSN+ DL+ A + + + + RLF S+ Y+ G++
Sbjct: 199 EQFPLVLKYIGKDPNSNDKADLEAAA------ETMRKVRHDVRLFSSSGYINNLAQGNLC 252
Query: 207 VAVGWSSDVLPAVKRM-----SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGP 261
VA+G+ D+ A +R +++ V+ PK+G +W D + IP + K I
Sbjct: 253 VAIGYGGDLNIAKRRAAEIGNNDIQVLTPKTGVGIWIDSFMIPK----DAKNIANA---- 304
Query: 262 SPLIHQWIEFCL 273
H++I + L
Sbjct: 305 ----HKYINYTL 312
>gi|398791267|ref|ZP_10552012.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
gi|398215321|gb|EJN01884.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
Length = 369
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPE----LAG-RISMVNS 145
DP G +A PY WGT I Y K + P++ W + +PE L G +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGKDVPLDSWDLVLKPENLEKLKGCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS++ +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAK-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GWS D+L A R ++ +VPK GA + D++AIP ++
Sbjct: 238 CVAIGWSGDILQAKDRADKANNGVHLGYIVPKQGALAFFDMFAIPKDAK 286
>gi|220928335|ref|YP_002505244.1| family 1 extracellular solute-binding protein [Clostridium
cellulolyticum H10]
gi|219998663|gb|ACL75264.1| extracellular solute-binding protein family 1 [Clostridium
cellulolyticum H10]
Length = 350
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP + ++ PY WGT+ I Y K+ ++ P++ W LW + +I M++S R+ IG
Sbjct: 123 FDPNNE-YSVPYMWGTVGIIYNKTMVKE----PVDSWNILWDKKYDKQIFMLDSLRDSIG 177
Query: 152 SVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK +G S N+ N D L+ A ++ Q+++ QA + D G +AV
Sbjct: 178 VTLKKLGYSLNTKNKDELERAKNELIKQKDIV----QAYVGDEVKDKMIMDEG--AMAVV 231
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
WS D + + ++ V+PK G++LW D IP+ ++ + + +I
Sbjct: 232 WSGDAVYMKSQNKDLEYVIPKEGSNLWFDSMVIPSNAKHQKEA------------EDFIN 279
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F +T AL + G S E K+ LLK I P E + CE
Sbjct: 280 FMCETEIALENTNYI--GYSTPQTEAKK-KVAPALLKD--------ITAYPTDEQIKNCE 328
Query: 331 FLEPLSEATLSDYE 344
L +A++ DY+
Sbjct: 329 VFIDL-DASIKDYD 341
>gi|398939706|ref|ZP_10668799.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398164028|gb|EJM52177.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 365
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + L I+ W ++ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGLDKIDSWDVVFEPENIKKLHSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA+G+S D+ A R + N+A +PK G +LW D+ AIP
Sbjct: 234 CVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIP 278
>gi|217965101|ref|YP_002350779.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes HCC23]
gi|386007529|ref|YP_005925807.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|386026122|ref|YP_005946898.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
gi|217334371|gb|ACK40165.1| ABC transporter spermidine/putrescine binding protein [Listeria
monocytogenes HCC23]
gi|307570339|emb|CAR83518.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|336022703|gb|AEH91840.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
Length = 357
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPNKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+ E + LP+E+ S D P + L E + L
Sbjct: 289 ENA-AINAEYVGYATPN--EKAVQLLPKEI-----SSDERF---YPDMDELNNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|418362030|ref|ZP_12962674.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|356686665|gb|EHI51258.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 353
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVN 144
++DP G +A PY WGT I Y K + + I+ W ++ PE ++S ++
Sbjct: 107 KVDP-GHQYAVPYLWGTNGIGYNVDKIKDVLGVDKIDSWAVIFEPENMQKLSRCGVAFLD 165
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E+I +VL Y+G NS+ D++ A ++ L + F S+ Y+ G
Sbjct: 166 SADEMIPAVLNYLGLDPNSHKPEDIKRA------EEQLLKVRPYVTYFHSSKYIGDLANG 219
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
D+ VA G+S D+L A R N+A +PK G +LW D+ AIPA
Sbjct: 220 DICVAAGFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMMAIPA 267
>gi|378767926|ref|YP_005196396.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
gi|386015231|ref|YP_005933511.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|386080026|ref|YP_005993551.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|327393293|dbj|BAK10715.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|354989207|gb|AER33331.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|365187409|emb|CCF10359.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
Length = 369
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVEKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS++ +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAK-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GWS D+L A R N+ VPK GA + D+ AIP ++
Sbjct: 238 CVAIGWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAK 286
>gi|157146493|ref|YP_001453812.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter koseri ATCC BAA-895]
gi|157083698|gb|ABV13376.1| hypothetical protein CKO_02253 [Citrobacter koseri ATCC BAA-895]
Length = 370
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNIDKVKAVLGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P EV +VL Y+G NS D G + L L R F S+ Y+ GD
Sbjct: 183 PEEVFATVLNYLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|170719470|ref|YP_001747158.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169757473|gb|ACA70789.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 401
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 157 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSQCGVAFLDSA 215
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS N D + A +Q L + F S+ Y+ GD+
Sbjct: 216 DEMLPAVLNYMGLDPNSTNPKDYEKA------EQKLLAVRPYVTYFHSSKYITDLANGDI 269
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R N+A +PK G +LW D+ A+P ++
Sbjct: 270 CVAAGFSGDVFQAKARAEEAEKGVNLAYAIPKEGGNLWFDVLAVPKDAK 318
>gi|398973895|ref|ZP_10684687.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398142322|gb|EJM31222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 362
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ +K + ++ +W K L K L +ND G + P
Sbjct: 74 DVVVPSNHFLARQVKAGAFLKLDRSQLPNW-KNLDPKLLALLEKNDPGNEH------SVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W L+ PE + +SM++S EV ++L Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENLKKLTQCGVSMMDSADEVFPAILNY 186
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
MG S + ++ L + F S+ Y+ GD+ VA G+S DV
Sbjct: 187 MGMDPRSEKPE-----DYKKAEEKLLSIRPYITYFHSSKYVSDLANGDICVAFGYSGDVF 241
Query: 217 PAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
A R N+A +PK GA+LW DL AIPA
Sbjct: 242 QAANRAKEAKNGVNIAYSIPKEGANLWFDLLAIPA 276
>gi|395649466|ref|ZP_10437316.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 362
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLKLLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLA 185
+ P+ + ++ ++S E+ ++L YMG S N D + A K L L
Sbjct: 157 FEPQNIKKLNQCGVAFLDSADELFPAILNYMGKDPRSENPKDYEEAEAK------LLTLR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW D
Sbjct: 211 PYITYFHSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|238757952|ref|ZP_04619134.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
gi|238703937|gb|EEP96472.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
Length = 369
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-YAIPYLWATTGIGYNVEKVKAALGQDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS +Q + L L R F S+ Y+ GD+
Sbjct: 182 PSEIFATVLNYLGKDPNS----IQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VAVGW+ D++ A R NVA +PK G + D++A+P+ ++
Sbjct: 238 CVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGVLAFFDVFAMPSDAK 286
>gi|429095480|ref|ZP_19157586.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 582]
gi|426281820|emb|CCJ83699.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 582]
Length = 370
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEILKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D +G + L L R F S+ Y+ GD VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R N++ +PK GA + D++A+PA ++
Sbjct: 249 WQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAK 287
>gi|398908920|ref|ZP_10654281.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398188983|gb|EJM76268.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 365
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W ++ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWAAVFEPENIKKLNSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
+A+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 234 CIAIGFSGDMFQARNRAAEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|429093187|ref|ZP_19155791.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 1210]
gi|426741998|emb|CCJ81904.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 1210]
Length = 281
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 35 DPDNK-YAMPYLWATTGIGYNVDKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 93
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D +G + L L R F S+ Y+ GD
Sbjct: 94 PEEIFATVLNYLGKDPNSSKAD-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGDT 149
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 150 CVAIGWAGDVWQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAK 198
>gi|408479602|ref|ZP_11185821.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. R81]
Length = 364
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K ++ + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG + NS N D ++ L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPD-----DYKKAEEKLLKVRPYVTYFHSSKYISDLANGNIC 233
Query: 207 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 234 VAAGFSGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIP 277
>gi|392982666|ref|YP_006481253.1| polyamine transporter PotD [Pseudomonas aeruginosa DK2]
gi|419754797|ref|ZP_14281155.1| polyamine transporter PotD [Pseudomonas aeruginosa PADK2_CF510]
gi|384398615|gb|EIE45020.1| polyamine transporter PotD [Pseudomonas aeruginosa PADK2_CF510]
gi|392318171|gb|AFM63551.1| polyamine transporter PotD [Pseudomonas aeruginosa DK2]
Length = 353
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A + F+S+ Y+K
Sbjct: 164 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPSWAAFNSSSYIKEL 217
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 218 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 270
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 271 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|239834302|ref|ZP_04682630.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822365|gb|EEQ93934.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 381
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 115 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 171
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 172 WAVLFDPEQSAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 224
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 225 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 284
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 285 LMWFDQMAIPADAK 298
>gi|47093931|ref|ZP_00231669.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|417314873|ref|ZP_12101566.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|422412245|ref|ZP_16489204.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|422415289|ref|ZP_16492246.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|422808896|ref|ZP_16857307.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
gi|47017691|gb|EAL08486.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|313619899|gb|EFR91458.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|313624594|gb|EFR94576.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|328467360|gb|EGF38440.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|378752510|gb|EHY63095.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
Length = 357
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+ E + LP+E+ S D P + L E + L
Sbjct: 289 ENA-AINAEYVGYATPN--EKAVKLLPKEI-----SSDERF---YPDMDELNNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|430002217|emb|CCF17998.1| Putrescine-binding periplasmic protein [Rhizobium sp.]
Length = 365
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 45/279 (16%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+ LS+ W R + DP G +A Y WGT + Y K + P++
Sbjct: 99 DKSKLPNLSNMWPEITER--LAKYDP-GNEYAVNYMWGTTGLGYNVDKVKAALGDVPVDS 155
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 182
W L++PE A + I+++++ E + Y+G +S AGG++ +
Sbjct: 156 WDILFKPENAEKLKACGINILDASDETFAIAMNYVGKDPDSKETADLEAGGEVYMN---- 211
Query: 183 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASL 236
+ + F+S+ Y+ GD +++GWS DVL A R NV V+PK G +
Sbjct: 212 -IRPFVKTFNSSAYIDELANGDTCISMGWSGDVLQAKARAEEAGNGVNVEYVIPKEGTYM 270
Query: 237 WADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALE 295
W D AIPA A +E H++I F + K EVI AS
Sbjct: 271 WFDNLAIPADAKNVEEA-------------HEFINFLM--------KPEVIAKASNYVQY 309
Query: 296 TTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEP 334
+ELL + ++ ++ PPAE +++ + P
Sbjct: 310 ANGNLASQELLDKEVLENPSVY---PPAETVSKLFTISP 345
>gi|399543357|ref|YP_006556665.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
gi|399158689|gb|AFP29252.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
Length = 348
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 92 IDPRGKI-------WAAPYRWGTMVIAYKKSKFRKHNLAP--IEDWKDLWRP--ELAGRI 140
IDPR +I + PY WGT+ I Y++ +L P + W DL +P EL G+I
Sbjct: 109 IDPRRRIEFEKAEDFGVPYFWGTIGIVYRR------DLVPFAVSSWMDLLQPIEELHGKI 162
Query: 141 SMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYL--- 197
SM+ ++IG+ LK +G S NS N D ++ ALL QA ++ YL
Sbjct: 163 SMIGDSADMIGAALKALGYSLNSTNED--------EMKDAEALLEAQAPAVNTYRYLSLN 214
Query: 198 --KAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 247
A G V +++ ++ D + N+A V+PK G ++W D ++ +AS
Sbjct: 215 EDSALLNGQVVMSMMYNGDTRMLQEYNDNIAFVLPKEGGNIWTDYLSVLSAS 266
>gi|433773782|ref|YP_007304249.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
gi|433665797|gb|AGB44873.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
Length = 365
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRP 134
LS+ W R + DP G ++ Y WGT+ I Y K + I+ W + P
Sbjct: 106 LSNMWDTVTER--TAKYDP-GNEYSVNYMWGTVGIGYNTKKVQAALGTDKIDSWDTFFNP 162
Query: 135 ELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR 189
+ + + +++SP +++ + LKY+G NS + D +A ++ L + R
Sbjct: 163 DSLAKLKHCGVYVLDSPSDILPAALKYLGLDPNSTSPD-DIA----KAEEALLKVRPYIR 217
Query: 190 LFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAI 243
F S+ Y+ A GD+ +AVGWS DV A K+ + VPK GA +W D AI
Sbjct: 218 KFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQMAI 277
Query: 244 PA 245
PA
Sbjct: 278 PA 279
>gi|395499287|ref|ZP_10430866.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. PAMC 25886]
gi|395793876|ref|ZP_10473221.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|421143690|ref|ZP_15603626.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
gi|395341989|gb|EJF73785.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|404505108|gb|EKA19142.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
Length = 362
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLKLLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLA 185
+ PE + ++ ++S E+ ++L YMG S N D + A K L L
Sbjct: 157 FEPENIKKLHECGVAFLDSADELFPAILNYMGKDPRSENPEDYKQAEAK------LLTLR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW D
Sbjct: 211 PYITYFHSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|295425899|ref|ZP_06818577.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus amylolyticus
DSM 11664]
gi|295064397|gb|EFG55327.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus amylolyticus
DSM 11664]
Length = 357
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 49/326 (15%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ K+K Y D+ D +S K L++ I D+D L + +L+++
Sbjct: 74 YTKIKQGGTAY---DITVPSDYMVSKMKKAHLLDKI----DRDKIPNLKYIGTSFLKKS- 125
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
DP ++ PY WGT+ I Y +K I W DLWR + +I +++S R+
Sbjct: 126 ---FDPNND-YSIPYFWGTLGIVYNDKYIKK---GSITSWNDLWRKKYRRQILLIDSARD 178
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDV 205
+G L MG S NS NN+ L++A K++ + N+ A++A++ +++ + +
Sbjct: 179 AMGLSLASMGYSMNSTNNLKLKLAQTKLNGLGNNIKAIIADEMKMYMIQN--------EA 230
Query: 206 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLI 265
+ V WS + ++ S++ V+PK ++LW D IP ++
Sbjct: 231 AIGVTWSGEAHEMMESNSHLHYVIPKPASNLWFDNLVIPKTAK------------NKKAA 278
Query: 266 HQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEI 325
+++I F L+ A + I A+P+ ++LL K D P A+
Sbjct: 279 YEFINFMLEPENAAQ-NAKYIGYATPNT-------AAQKLLPKKTRNDRQF---YPSAKT 327
Query: 326 LARCEFLEPLSEATLSDYEWLVADLQ 351
L+ + + L +Y L + +
Sbjct: 328 LSHLQVYQDLGNKVTQEYNDLFLEFK 353
>gi|365881934|ref|ZP_09421216.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 375]
gi|365289791|emb|CCD93747.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 375]
Length = 368
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 29/221 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +L IK ++ +P+ D+ L++ W V R DP G +AA
Sbjct: 79 DVVVPTAYFLQRQIKAKIFQPL----DKSKLPNLANAWPVVTER--LAIYDP-GNQFAAN 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y WGT I Y K L P I+ W +++PE + + M++S ++ + L
Sbjct: 132 YMWGTTGIGYNVKTIEKI-LGPGARIDSWDMVFKPENLAKFKDCGVHMLDSADDIFPAAL 190
Query: 155 KYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
Y+G NS DL+ A + + +A R F S+ YL A G++ + VGWS
Sbjct: 191 NYLGLDPNSTKQADLEKAA------EVVGKVAPSVRKFHSSEYLSALATGEICLVVGWSG 244
Query: 214 DVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
D++ A R + +PK GA ++ D +AIPA ++
Sbjct: 245 DIMQARSRAEEAKNGIEIGYAIPKEGAQMFFDNFAIPADAQ 285
>gi|423113485|ref|ZP_17101176.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
gi|376388854|gb|EHT01547.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
Length = 370
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAIP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSAKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKEEAYQFLNYLMRPDVIAH 307
>gi|339006887|ref|ZP_08639462.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|421873293|ref|ZP_16304907.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
gi|338776096|gb|EGP35624.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|372457619|emb|CCF14456.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
Length = 349
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 44/264 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP K ++ Y WG IAY K K+ P W DLW P+ GR+ ++N RE +G
Sbjct: 122 DPDNK-YSVVYTWGVTGIAYNK----KYVTEPPTSWSDLWNPKYKGRVVVLNDSREALGM 176
Query: 153 VLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
LK G S ++ + +L +A +L L FD+ + F + W+ W
Sbjct: 177 SLKKNGFSNSTISEKELDIANA------DLKKLLPNLLAFDTDTIKQKFIAEEAWIGTVW 230
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
S D +++ VVPK G +++AD +AIP ++ + L ++I +
Sbjct: 231 SGDAAFIYPENNDIGYVVPKEGGTIFADTFAIPKGAKHKK------------LAEEFINY 278
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQD----TNLIVGVPPAEILA 327
+ P S ET P E K P N ++ + P E ++
Sbjct: 279 MMD------------PAVSVKNYETIGYSNPNE--KAHPLHSEKYRNNKMIFLSPEE-MS 323
Query: 328 RCEFLEPLSEATLSDYEWLVADLQ 351
R E+L+ + E TL Y+ L +L+
Sbjct: 324 RTEWLKDVGE-TLQVYDRLWTELK 346
>gi|395495482|ref|ZP_10427061.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. PAMC 25886]
Length = 364
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K ++ + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDKIDSWAVLFEPENMKKLASCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A ++ L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPEDYKKA------EEKLLKVRPYVTYFHSSKYISDLANGNI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + N+A V+PK G +LW D+ AIP
Sbjct: 233 CVAAGFSGDVFQAKARAAEAGKGVNIAYVIPKEGGNLWFDVLAIP 277
>gi|334122697|ref|ZP_08496733.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
gi|333391812|gb|EGK62921.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
Length = 370
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLSNWKNLDPEVLKLVAKH------DPENK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y W T I Y K K L P ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKV-KAALGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVL 191
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ D
Sbjct: 192 NYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGD 247
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
V A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 248 VWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAH 307
>gi|229590032|ref|YP_002872151.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fluorescens SBW25]
gi|229361898|emb|CAY48798.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens SBW25]
Length = 362
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGVDRIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLA 185
+ PE + ++ ++S E+ ++L Y+G S N D + A K L L
Sbjct: 157 FEPENIKKLNQCGVAFLDSADELFPAILNYLGKDPRSENPEDYKQAEAK------LLTLR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW D
Sbjct: 211 PYITYFHSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|398868530|ref|ZP_10623927.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398232984|gb|EJN18932.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 365
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W ++ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWAAVFEPENIKKLQSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLDANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 234 CVAIGFSGDMFQARNRAAEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|398844417|ref|ZP_10601481.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254503|gb|EJN39596.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 312
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ + P+ ++ +W K L K L +ND G +A P
Sbjct: 24 DVVVPSNHFLARQAQAGAFLPLDRSKLPNW-KHLDPKLLQQLEQNDPG------NQYAVP 76
Query: 103 YRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W L+ PE + ++ ++SP E+ ++L Y
Sbjct: 77 YLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAILNY 136
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
MG S + AG + L L F S+ Y+ GDV VA G+S DV
Sbjct: 137 MGMDPRS-----EKAGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGYSGDVF 191
Query: 217 PAVKRM------SNVAVVVPKSGASLWADLWAIP 244
A R VA +PK G++LW DL AIP
Sbjct: 192 QAANRAIEAKNGVKVAYSIPKEGSNLWFDLLAIP 225
>gi|374604938|ref|ZP_09677885.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
gi|374389461|gb|EHQ60836.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
Length = 344
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
K+KA A Y DL+ D ++ IK+ L+E I ++D + ++ V +N A
Sbjct: 66 KIKAGGANY---DLIQPSDYMVASMIKQDLLETI----NKD--NIPNFQYVVDRFKNPA- 115
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
DP + + Y WG IAY K KH W DLW+ E G++ +++ RE+I
Sbjct: 116 -YDPNSE-HSIIYMWGVTGIAYNK----KHIAEAPTSWADLWKDEYKGKVLLLDDNREII 169
Query: 151 GSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G LK G S +++N D+ A +L L FD+ + + + W+
Sbjct: 170 GMALKKAGKSNSADNEADINAAA------DDLRKLVPNVVAFDTDNIKQKMIQEEGWIGT 223
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D + +VA VVP+ G++++AD +AIP ++
Sbjct: 224 VWSGDAAFIAEENPDVAYVVPQEGSTIFADTYAIPKGAK 262
>gi|354722725|ref|ZP_09036940.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter mori LMG 25706]
Length = 370
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 30/241 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLSNWKNLDPEVLKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y W T I Y K K L P ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKV-KAALGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVL 191
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
Y+G NSN A +L L L R F S+ Y+ GD+ VA+GW+
Sbjct: 192 NYLGKDPNSNK-----ANDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAG 246
Query: 214 DVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLI 265
DV A R NV+ +PK GA + D++A+P A ++ E Q + P +
Sbjct: 247 DVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIA 306
Query: 266 H 266
H
Sbjct: 307 H 307
>gi|444312665|ref|ZP_21148242.1| extracellular solute-binding protein [Ochrobactrum intermedium M86]
gi|443483958|gb|ELT46783.1| extracellular solute-binding protein [Ochrobactrum intermedium M86]
Length = 367
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 101 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 157
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 158 WAVLFDPEQSAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 210
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 211 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 270
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 271 LMWFDQMAIPADAK 284
>gi|398857198|ref|ZP_10612900.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398241245|gb|EJN26901.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 365
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 39/285 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + +P+ ++ +W K L+ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQPLDKSKLPNW-KNLN---PVLLKNASASDPD---NGHAFP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I Y +K ++ AP+ W L++PE A + IS ++SP E++ + L
Sbjct: 129 YMWGSIGIGYNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+ NS + K+ + + AL F S+ Y+ G++ VAVG+S
Sbjct: 189 YLSYPVNSQD--------KVQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYS 240
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL 264
DVL A R + +PK GA + D+ AIP AA+ + P +
Sbjct: 241 GDVLQAKARAKEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDII 300
Query: 265 --IHQWIEFCLQTARALPFKQEVI---PGA-SPSALETTLVKLPE 303
+ I + A A P E I PG+ P A+ TL +P+
Sbjct: 301 AEVTNNIGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|395799458|ref|ZP_10478739.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. Ag1]
gi|421141037|ref|ZP_15601031.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens BBc6R8]
gi|395336562|gb|EJF68422.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. Ag1]
gi|404507808|gb|EKA21784.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens BBc6R8]
Length = 364
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K ++ + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A ++ L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPEDYKKA------EEKLLKVRPYVTYFHSSKYISDLANGNI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + N+A V+PK G +LW D+ AIP
Sbjct: 233 CVAAGFSGDVFQAKARAAEAGKGVNIAYVIPKEGGNLWFDVLAIP 277
>gi|398928686|ref|ZP_10663639.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398168075|gb|EJM56101.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 365
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W ++ PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWAAVFEPENIKKLNSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
+A+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 234 CIAIGFSGDMFQARNRAAEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|70733210|ref|YP_262983.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
gi|68347509|gb|AAY95115.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
Length = 364
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 31/197 (15%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVN 144
E++ G +A PY WGT I Y K + + I+ W L+ PE + ++ ++
Sbjct: 117 EMNDPGNQYAVPYLWGTNGIGYNVDKVKAALGVDKIDSWSVLFEPENIKKLNSCGVAFLD 176
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E++ +VL Y+G + NS N D + A + L + F S+ Y+ G
Sbjct: 177 SADEMMPTVLNYLGLNANSTNPQDYKKA------EATLLAVRPYVTYFHSSKYISDLANG 230
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGR 257
++ VA+G+S DV A R + N+A +PK G +LW D+ AIP S KQ
Sbjct: 231 NICVAIGFSGDVFQAKARAADAGKGVNIAYAIPKEGGALWFDMLAIPKDST-NVKQ---- 285
Query: 258 VRGPSPLIHQWIEFCLQ 274
H +I + LQ
Sbjct: 286 -------AHAFINYLLQ 295
>gi|387893506|ref|YP_006323803.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
gi|387164504|gb|AFJ59703.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
Length = 362
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND+G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLKLLEQNDSGNAH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLA 185
+ PE + ++ ++S E+ ++L YMG S N D + A K L L
Sbjct: 157 FEPENIKKLHECGVAFLDSADELFPAILNYMGKDPRSENAEDYKQAEAK------LLTLR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ G++ VA G+S DV A R N+A +PK G++LW D
Sbjct: 211 PYITYFHSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|359781793|ref|ZP_09285016.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
gi|359370163|gb|EHK70731.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
Length = 362
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G + PY WGT I Y K + ++ W L+ PE + +S ++SP
Sbjct: 118 DP-GNQYGVPYLWGTNGIGYNVDKVKAALGTDKLDSWAILFEPENLKKLSKCGVSFMDSP 176
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
EV +VL+Y+G NS N D + L + F S+ Y+ G++
Sbjct: 177 DEVYPAVLQYLGLDPNSTNPD-----DYKKAEAQLLKVRPYITYFHSSKYISDLANGNIC 231
Query: 207 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A K+ N+ +PK GA+LW DL AIP ++
Sbjct: 232 VAFGYSGDVFQARSRAEEAKKGVNIGYAIPKEGANLWFDLLAIPKDAK 279
>gi|423204840|ref|ZP_17191396.1| hypothetical protein HMPREF1168_01031 [Aeromonas veronii AMC34]
gi|404625716|gb|EKB22531.1| hypothetical protein HMPREF1168_01031 [Aeromonas veronii AMC34]
Length = 361
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++L+ IK + + D+ L++ V L++ + ++DP G +A P
Sbjct: 73 DLVVPSNNFLAKQIKAGAFQKL----DKSLLPNLANLDPVLLKQLE--KVDP-GHQYAVP 125
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W ++ PE ++S ++S E+I + L Y
Sbjct: 126 YLWGTNGIGYNVDKIKAVLGVDKIDSWATIFEPENMEKLSRCGVAFLDSADEMIPAALNY 185
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G NS+ A G I + L L + F S+ Y+ GD+ VA G+S D+
Sbjct: 186 LGLDPNSH------ATGDIKQAEALLLKVRPYVAYFHSSKYIGDLANGDICVAAGFSGDI 239
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--I 265
L A R +A +PK G +LW D+ AIP A + E + V P + +
Sbjct: 240 LQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPSDATNVKEAHALINYVLQPEVIAKV 299
Query: 266 HQWIEFCLQTARALPFKQEVI 286
++ + +RA F E +
Sbjct: 300 SDYVGYANPNSRAGEFMDEAV 320
>gi|297588236|ref|ZP_06946879.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Finegoldia magna ATCC
53516]
gi|297573609|gb|EFH92330.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Finegoldia magna ATCC
53516]
Length = 341
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK Y D+V D IK+ ++E I D+ K + K+ RN
Sbjct: 62 YMKVKEGGNNY---DVVVPSDYMAEKMIKQGMLEKI------DYSKIPNFKYIDEKFRN- 111
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ DP+ + + PY WGT+ I Y K+K + ++ W LW + I M+NS R+
Sbjct: 112 -LDYDPKNE-YTVPYMWGTVGILYNKNKVKDK----VDSWNILWDEKYKDNIIMMNSTRD 165
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
+G LK +G S NS N +L+ A + Q+++ L A L D T D +
Sbjct: 166 TLGVALKRLGYSMNSRNEKELEQAKESLIKQKDIVL----AYLVDETKNQMVNEEAD--I 219
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 243
AV +S D + A N+ V+PK G++LW D AI
Sbjct: 220 AVMYSGDAIVAKGENENLEYVIPKEGSNLWFDTLAI 255
>gi|77459054|ref|YP_348560.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77383057|gb|ABA74570.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens Pf0-1]
Length = 362
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ +K + ++ +W K L K L +ND G + P
Sbjct: 74 DVVVPSNHFLARQVKAGAFLKLDRSQLPNW-KNLDPKLLALLEKNDPGNEH------SVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W L+ PE + +SM++S EV ++L Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENLKKLTQCGVSMMDSADEVFPAILNY 186
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
MG S D + A ++ L + F S+ Y+ GD+ VA G+S DV
Sbjct: 187 MGMDPRSEKPEDYKKA------EEKLLSIRPYITYFHSSKYVSDLANGDICVAFGYSGDV 240
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
A R N+A +PK GA+LW DL AIPA
Sbjct: 241 FRAANRAKEAKNGVNIAYSIPKEGANLWFDLLAIPA 276
>gi|333367327|ref|ZP_08459603.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
gi|332978832|gb|EGK15515.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
Length = 386
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 41/260 (15%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV 149
E DP K ++ PY WG+ IA + +L+ I W DLW P+ GR+ ++N R+V
Sbjct: 153 AEFDPENK-YSVPYLWGSSGIAVNTKRI---DLSSINSWDDLWLPQYKGRVMLMNDLRDV 208
Query: 150 IGSVLKYMG---ASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
L +G ++ + N+I + + LA L R F+S F G+ +
Sbjct: 209 FSMSLLTLGYPTSTQDPNHIK--------AAYEKLATLMPNVRTFNSDAPRMPFMEGETY 260
Query: 207 VAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGPSPL 264
+ + W+ +V+ A + M + V PK G +W D AIP A LE
Sbjct: 261 LGLAWNGEVIMAQDQGMPELDFVYPKEGVIMWMDNMAIPKNAKNLENA------------ 308
Query: 265 IHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE 324
+ +I+F ++ + +E+ G SPS L+ P + N + PPA+
Sbjct: 309 -YTFIDFLMRPENSAIISEEIGYG-SPSDAARALM----------PPKMANNEIIYPPAD 356
Query: 325 ILARCEFLEPLSEATLSDYE 344
+ F + + T++ Y+
Sbjct: 357 KMGHALFRRDVGDKTMALYQ 376
>gi|392423252|ref|YP_006459856.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985440|gb|AFM35433.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 365
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 92 IDPR--GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
+DP G ++ PY WGT+ I Y K + + AP++ W +++PE + +S
Sbjct: 116 LDPSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKSCGVSF 175
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGI 202
++SP E++ + L Y+G + +S D ++ +Q + F S+ Y+
Sbjct: 176 LDSPTEILPAALHYLGYAPDSGKADELKKAEELFMQ-----IRPHVAYFHSSKYISDLAN 230
Query: 203 GDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG 255
G+ VA+G+S D+ A R NV +PK GA + D+ A+PA A +E+ +
Sbjct: 231 GESCVAIGYSGDIYQAKARAEEAGNGVNVGYKIPKEGAGSFFDMLAVPADAKNVESAHVF 290
Query: 256 -GRVRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 292
+ P + I +++F A A P E I PG P+
Sbjct: 291 INYLMKPEVMASITDYVQFPNGNAAATPLVDEAIRTDPGIYPN 333
>gi|205357017|ref|ZP_02344173.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205324502|gb|EDZ12341.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 371
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLALKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|255655004|ref|ZP_05400413.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-23m63]
gi|296449753|ref|ZP_06891523.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP08]
gi|296877930|ref|ZP_06901949.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP07]
gi|296261477|gb|EFH08302.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP08]
gi|296430998|gb|EFH16826.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP07]
Length = 350
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 47/320 (14%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK+ S Y DLV D + + L+E + FK + + YL ++
Sbjct: 71 YQKVKSGSTHY---DLVFPSDYMVEKMKNEGLLEKLD-------FKNIPNM--KYLDKSF 118
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ + ++ Y WGT+ I Y K + + PI+ W LW P+ G I M +S R+
Sbjct: 119 LNPVYDKTNEYSVAYMWGTLGILYNKKEVKD----PIDSWNILWNPKYKGNIMMFDSVRD 174
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
IG LK +G S NS N ++ A + Q++L L D + G G+V +
Sbjct: 175 TIGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAM 228
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
+ +S D + +++ ++ +PK G + W D +P ++ + +
Sbjct: 229 GMLYSGDAVTLMEQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEA------------EL 276
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
+I F L A E I ++P+ T +KL + + P V P E+L
Sbjct: 277 FINFLLDPENA-KVNAEYIGYSTPN---TGALKLLDPEITENP-------VAYPSKEVLN 325
Query: 328 RCEFLEPLSEAT-LSDYEWL 346
+CE E + E L D W+
Sbjct: 326 KCETFEDIGENIKLYDKAWI 345
>gi|260769730|ref|ZP_05878663.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio furnissii CIP 102972]
gi|375133100|ref|YP_005049508.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio furnissii
NCTC 11218]
gi|260615068|gb|EEX40254.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio furnissii CIP 102972]
gi|315182275|gb|ADT89188.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio furnissii
NCTC 11218]
Length = 344
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 37/254 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP+ K ++ PY WG ++Y ++ + I WKDLW + A ++ +++ R+V G
Sbjct: 117 DPQNK-YSLPYIWGVTGLSYNEAMIPE----GITQWKDLWNSKYAQQVMLIDDIRDVFGM 171
Query: 153 VLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
LK G S N+ N +++ A Q+LA L + L++S + G+ + + W
Sbjct: 172 ALKLNGYSINTKNEKEIEQA------YQSLAALKDNVLLYNSDAPHVPYVSGEASLGMQW 225
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
+ + + M + V+P GA LW D + IP+ S + L H++I F
Sbjct: 226 NGNAYQGQQEMPELKFVMPAEGAVLWMDNFTIPSGSEHKA------------LAHKFINF 273
Query: 272 CLQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
Q + E++ SA ++ LPE L N P E +A+ E
Sbjct: 274 MYQPEN----QAEIVNSLGYASATKSGRALLPEAL--------RNNATIFPAEEDMAKGE 321
Query: 331 FLEPLSEATLSDYE 344
F+ + L+ YE
Sbjct: 322 FINDVGPQALAIYE 335
>gi|330501319|ref|YP_004378188.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915605|gb|AEB56436.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 363
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVN 144
E + G +A PY WGT I Y K + + I+ W L+ PE ++S ++
Sbjct: 116 ETNDPGNQYAVPYLWGTNGIGYNVEKVKAALGVDEIDSWAVLFEPENIKKLSQCGVAFLD 175
Query: 145 SPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
S E+I ++L Y+G NS N D + L + F S+ Y+ G+
Sbjct: 176 SGDEMIPAMLNYLGMDPNSTNPD-----DYAKAEAKLLEVRPYVTYFHSSKYIGDLANGN 230
Query: 205 VWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 247
+ VA G+S D+L A R +A +PK GA+LW D+ AIPA S
Sbjct: 231 ICVAAGFSGDILQAADRAEEAGKGIEIAYSIPKEGANLWFDMMAIPADS 279
>gi|317495185|ref|ZP_07953555.1| extracellular solute-binding protein [Gemella morbillorum M424]
gi|316914607|gb|EFV36083.1| extracellular solute-binding protein [Gemella morbillorum M424]
Length = 358
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP + ++ PY WGT+ I Y K+K E W DLW L I +++ RE++G
Sbjct: 125 FDPNNE-YSVPYFWGTLGIVYNKTKVPSD--LKFEKWDDLWDARLENNILLIDGAREMMG 181
Query: 152 SVLKYMGASYN-SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
L+ G S N +N ++L +A ++ L LL + ++ + WV+V
Sbjct: 182 IALQSEGNSVNDTNEVNLNLA------EKKLELLHKNVKAINADEKKMLMINNEAWVSVV 235
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 250
+S D + N+ VPK G +LW D IP S+ E
Sbjct: 236 FSGDASAIMTENENMVYSVPKEGTNLWFDNIVIPKTSKNE 275
>gi|325263841|ref|ZP_08130574.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium sp.
D5]
gi|324030879|gb|EGB92161.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium sp.
D5]
Length = 627
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 58 KRLIEPIAGAE-DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSK 116
+R+IE AE D D + + Y+ N + + DP K ++ PY +GT+ I Y K+
Sbjct: 365 QRMIENDLLAEIDFDNVPNIKYIDSTYM--NQSRQFDPENK-YSVPYLFGTVGILYNKTM 421
Query: 117 FRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKIS 176
+ PI+ W LW + I M +S R+ G LKY+G S NS ++D A K+
Sbjct: 422 VDE----PIDSWSVLWDEKYKDSILMQDSVRDAFGVTLKYLGYSLNSTDLDELEAAKKLL 477
Query: 177 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 236
++Q + QA + D K G + + V +S + L ++ V+PK G++L
Sbjct: 478 IEQKPLV---QAYVVDQVR-DKMIG-NEAAIGVIYSGEALYTQVENPDLEYVIPKEGSNL 532
Query: 237 WADLWAIPAASR 248
W D W IP ++
Sbjct: 533 WIDSWVIPKNAK 544
>gi|322833214|ref|YP_004213241.1| extracellular solute-binding protein [Rahnella sp. Y9602]
gi|384258392|ref|YP_005402326.1| putrescine ABC transporter periplasmic-binding protein [Rahnella
aquatilis HX2]
gi|321168415|gb|ADW74114.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602]
gi|380754368|gb|AFE58759.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rahnella aquatilis HX2]
Length = 369
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y+ NS A +L L L R F S+ Y+ GD
Sbjct: 182 PAEIYATVLNYLHLDPNSTK-----ASDYTGAANDLLLKLRPNIRYFHSSQYINDLANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VA+GW+ DV+ A R NVA +PK GA + D++AIPA ++
Sbjct: 237 ICVAIGWAGDVMQAGNRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAK 286
>gi|170747368|ref|YP_001753628.1| extracellular solute-binding protein [Methylobacterium
radiotolerans JCM 2831]
gi|170653890|gb|ACB22945.1| extracellular solute-binding protein family 1 [Methylobacterium
radiotolerans JCM 2831]
Length = 375
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIE 126
D+ K L + W R A DP G +A Y WGT I Y + R+ A +
Sbjct: 108 DKSRLKNLGNLWPEVTSRLAA--YDP-GNTYAVDYMWGTTGIGYNVAAVRERLGANATVN 164
Query: 127 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 181
W + P A + I M++SP ++I S+L GA +S D V L
Sbjct: 165 SWSVVLNPASANKLKECGIMMLDSPEDLIPSMLPAFGAKADSKRWDDMTL-----VTDAL 219
Query: 182 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGAS 235
+ R F S+ Y++A GD+ +AVG+S D++ A +R ++A VVPK GA
Sbjct: 220 YKVRGAVRKFHSSEYIQALANGDICLAVGYSGDIMQAKRRAEEAKNGIDIAYVVPKEGAL 279
Query: 236 LWADLWAIP 244
+W D +AIP
Sbjct: 280 MWFDTFAIP 288
>gi|443471975|ref|ZP_21062012.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442902200|gb|ELS27841.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 361
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV DS+L +K + +P+ ++ +W KV + DP G + P
Sbjct: 72 DLVVPSDSFLPNYLKAGVFQPLDRSKLPNWQNLNPALLKVLAAK------DP-GNQYVMP 124
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT IAY K + AP++ W ++ P+ R ++ ++SP EVI VL
Sbjct: 125 YMWGTNGIAYNVDKVKAILGENAPLDSWDLVFNPDNLARLKQCGVAFLDSPTEVIPEVLH 184
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G S NS N + + V+ L F S+ ++ GDV VA+ WS
Sbjct: 185 YLGLSPNSRNPEDYKKAEALLVK-----LRPHVSYFSSSKFVTDLANGDVCVAIAWSGGA 239
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
+ A R V +P+ G + W D+ AIP ++
Sbjct: 240 MQAAARAREAGNGVKVEYRIPREGTAAWFDVLAIPKDAK 278
>gi|265984646|ref|ZP_06097381.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13]
gi|306837729|ref|ZP_07470597.1| putrescine-binding periplasmic protein [Brucella sp. NF 2653]
gi|306844613|ref|ZP_07477200.1| putrescine-binding periplasmic protein [Brucella inopinata BO1]
gi|264663238|gb|EEZ33499.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13]
gi|306275057|gb|EFM56820.1| putrescine-binding periplasmic protein [Brucella inopinata BO1]
gi|306407185|gb|EFM63396.1| putrescine-binding periplasmic protein [Brucella sp. NF 2653]
Length = 367
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 101 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 157
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 158 WDVLFDPEKSAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 210
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 211 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 270
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 271 LIWFDQMAIPADAK 284
>gi|398917403|ref|ZP_10658140.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398172997|gb|EJM60845.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 365
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 135/287 (47%), Gaps = 41/287 (14%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + + + ++ +W K L+ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQTLDKSKLTNW-KNLN---PVLLKNASASDPD---NAHAIP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + K R+ AP W L++PE A + IS ++SP E++ + L
Sbjct: 129 YMWGSIGIGFNPQKVREVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPTALH 188
Query: 156 YMGASYNSNNIDLQ-VAGGK---ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
Y+G Y N+ D Q +A + + ++ N+A F S+ Y+ G++ VAVG+
Sbjct: 189 YLG--YPVNDQDKQHIAEAEALFMKIRPNVAY-------FHSSKYISDLANGNICVAVGY 239
Query: 212 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSP 263
S DVL A R + +PK GA+ + D+ AIP AA+ + P
Sbjct: 240 SGDVLQAKARAQEAGDKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDV 299
Query: 264 L--IHQWIEFCLQTARALPFKQEVI---PGASPS-ALETTLVKLPEE 304
+ I I + A A P E I PG+ PS A+ TL +P++
Sbjct: 300 IADITNNIGYSNANAAATPLVDEAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|421858504|ref|ZP_16290771.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
gi|410831949|dbj|GAC41208.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
Length = 347
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 23/219 (10%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAG 90
K+KA A Y DL+ D ++ +K+ L+E I K ++ + R
Sbjct: 69 KIKAGGANY---DLIQPSDYMVASMMKQDLLETIN--------KDNIPNFQYVVSRFQNP 117
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
E DP + + Y WG IAY K + + AP W DLW E G++ +++ RE+I
Sbjct: 118 EYDPDSE-HSIIYTWGVTGIAYNKKQIAE---APTS-WADLWNDEYKGKVLLLDDNREII 172
Query: 151 GSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAV 209
G LK G S +++N D+ A +L L FD+ + + + W+
Sbjct: 173 GVALKKAGKSNSTDNEADINAAA------DDLRKLVPNVVAFDTDNIKQKMIQEEGWIGT 226
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D +VA VVP+ G++++AD +AIP ++
Sbjct: 227 VWSGDAAFIAAENPDVAYVVPQEGSTIFADTYAIPKGAK 265
>gi|417209667|ref|ZP_12020951.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
gi|419202092|ref|ZP_13745314.1| potF [Escherichia coli DEC8B]
gi|378055736|gb|EHW17997.1| potF [Escherichia coli DEC8B]
gi|386196292|gb|EIH90518.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
Length = 370
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKH------DPDNK-FAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E +VL
Sbjct: 133 YMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEGFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 WQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|260547020|ref|ZP_05822759.1| extracellular solute-binding protein family 1 [Brucella abortus
NCTC 8038]
gi|260096070|gb|EEW79947.1| extracellular solute-binding protein family 1 [Brucella abortus
NCTC 8038]
Length = 374
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 108 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 164
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 165 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 217
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 218 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 277
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 278 LIWFDQMAIPADAK 291
>gi|152999700|ref|YP_001365381.1| extracellular solute-binding protein [Shewanella baltica OS185]
gi|151364318|gb|ABS07318.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS185]
Length = 366
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ IK +P+ A+ + FK L+ L + D G +A P
Sbjct: 77 DIVVPSNHFLAKQIKAGAFKPLDRAKLPN-FKNLNPALMKLLEKADPG------NQYAVP 129
Query: 103 YRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLK 155
Y WGT I Y K + AP + ++ P+ A +IS M++S +++ L
Sbjct: 130 YLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDSADDMVPQALI 189
Query: 156 YMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS+N D + AG + L ++ F S+ Y+ GD+ VA G+S D
Sbjct: 190 YLGLDPNSSNPSDYEKAG------ELLEIIRPYVTYFHSSRYISDLANGDICVAFGFSGD 243
Query: 215 VLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 247
V A R + + +PK GA+LW D+ AIPA S
Sbjct: 244 VFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|197301810|ref|ZP_03166880.1| hypothetical protein RUMLAC_00536 [Ruminococcus lactaris ATCC
29176]
gi|197299250|gb|EDY33780.1| ABC transporter, solute-binding protein [Ruminococcus lactaris ATCC
29176]
Length = 626
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 40 MAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIW 99
+A D+V D + I+ L+ I + D L + Y++ + + DP K +
Sbjct: 351 IAYDVVCPSDYMIQRMIENDLLAEI----NYDHIPNLKYIGDNYMKM--SRQFDPENK-Y 403
Query: 100 AAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 159
+ PY WGT+ I Y K + P++ W LW + I M +S R+ LKY+G
Sbjct: 404 SVPYLWGTVGILYNKKMVDE----PVDSWGILWDKKYEDSILMQDSVRDAFAVALKYLGY 459
Query: 160 SYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 219
S NS ++D A + ++Q + QA + D K G G+ + V +S + L
Sbjct: 460 SLNSTDLDELEAAKNLLIEQKPLV---QAYVIDQVRD-KMIG-GEAALGVIYSGEALYCQ 514
Query: 220 KRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ S++ V+PK G ++W D W IP ++
Sbjct: 515 QENSDLDYVIPKEGTNIWIDSWVIPKNAK 543
>gi|365888952|ref|ZP_09427683.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. STM 3809]
gi|365335351|emb|CCE00214.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. STM 3809]
Length = 368
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 29/218 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +L IK ++ +P+ D+ L++ W V R DP G +AA
Sbjct: 79 DVVVPTAYFLQRQIKAKIFQPL----DKAKLPNLANAWPVVTAR--LATYDP-GNQFAAN 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y WGT I Y K L P I+ W +++PE R + M++S ++ + L
Sbjct: 132 YMWGTTGIGYNVKAIEKI-LGPGARIDSWDIVFKPENLARFKDCGVHMLDSADDIFPAAL 190
Query: 155 KYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
Y+G NS DL+ A + + +A R F S+ YL A G++ + VGWS
Sbjct: 191 NYLGLDPNSTKQADLEKAA------EVVGKVAPSVRKFHSSEYLSALATGEICLVVGWSG 244
Query: 214 DVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
D++ A R + +PK GA ++ D AIPA
Sbjct: 245 DIMQARSRAEEAKNGIEIGYAIPKEGAQMFFDNLAIPA 282
>gi|154252003|ref|YP_001412827.1| extracellular solute-binding protein [Parvibaculum lavamentivorans
DS-1]
gi|154155953|gb|ABS63170.1| extracellular solute-binding protein family 1 [Parvibaculum
lavamentivorans DS-1]
Length = 363
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 132/302 (43%), Gaps = 35/302 (11%)
Query: 8 LKFQMNLCASIDGIVNNLSVPFNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGA 67
K + + ++D + ++S F K++ + Y D++ + W+ I+ +++ +
Sbjct: 62 FKAETGIEVTMD-LFADVSELFAKMRGGNPGY---DVIVPSNDWVQRMIQAGMLQEL--- 114
Query: 68 EDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIED 127
D K + K +Y R D DP G+ ++ PY WGT+ I Y+KSK A +
Sbjct: 115 ---DHSKIPNIK-NIYPRFMDE-PFDP-GRKYSLPYMWGTVGIGYRKSKVS----AVPDS 164
Query: 128 WKDLW-RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLAN 186
W L+ E AGR ++++ +IG LKY+G S NS + A ++ ++Q
Sbjct: 165 WGALYDSDEYAGRSALLSDCGTMIGCALKYLGYSLNSTDKAENEAAAELIIKQK-----G 219
Query: 187 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 246
+ + F + G+V V + +S D+ + ++ VVPK G +W D+ AIPA+
Sbjct: 220 KIKAFAEDNGQDLLAAGEVDVTMEYSGDIAQLMSEDDDIGYVVPKEGGIIWEDVLAIPAS 279
Query: 247 SRL--ETKQIGGRVRGPSP--LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 302
+ + P P LI +I+F P +T+ V P
Sbjct: 280 APHPENAHAFINYIHSPEPNQLITDYIQFATPNKAGFDLM--------PEEYQTSEVTFP 331
Query: 303 EE 304
E
Sbjct: 332 PE 333
>gi|344341161|ref|ZP_08772083.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
gi|343799041|gb|EGV16993.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
Length = 367
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 102 PYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
PY WGT + + K + A ++ W ++ PE A + IS+++ P EV + L
Sbjct: 130 PYMWGTSGLGINRDKIQAALGETADLDTWALVFDPETASKLGDCGISLLDDPTEVYSAAL 189
Query: 155 KYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
Y+G NS + DL A I + R F S+ Y+ GD+ VA+G+S
Sbjct: 190 AYLGKDPNSLDKDDLDAASALIKA------IHPHVRYFHSSQYMSDLANGDLCVAMGYSG 243
Query: 214 DVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIH 266
DV A R + V+P+ GA++W D+ AIP P+P H
Sbjct: 244 DVFQAQSRAEEAGKGVVIDYVIPREGAAVWTDVMAIPK-------------DAPNPAAAH 290
Query: 267 QWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
+I + LQ A EV A+P+ T L+
Sbjct: 291 AFIAYMLQPAAIAAVSNEVY-YANPNLAATPLLD 323
>gi|326204713|ref|ZP_08194568.1| extracellular solute-binding protein family 1 [Clostridium
papyrosolvens DSM 2782]
gi|325985084|gb|EGD45925.1| extracellular solute-binding protein family 1 [Clostridium
papyrosolvens DSM 2782]
Length = 349
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 36/254 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ + ++ PY WGT+ I Y K+ ++ P+ W LW + +I M++S R+ I
Sbjct: 122 FDPKNE-YSVPYMWGTVGIIYNKTMVKE----PVNSWNILWDKKYDKQIFMLDSQRDSIA 176
Query: 152 SVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK +G S N+ N +L+ A ++ Q+++ QA + D G G +AV
Sbjct: 177 VALKKLGYSLNTKNKAELEKAKNELIKQKDIV----QAYVGDEVKDKMIMGEG--ALAVV 230
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
WS D + + ++ +PK G++LW D IP+ ++ + + ++I
Sbjct: 231 WSGDAVYMKNQNKDLEYAIPKEGSNLWFDSMVIPSTAKHQKEA------------EEFIN 278
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F T AL K G S E KL LLK I P E + CE
Sbjct: 279 FMCDTEIAL--KNTNYIGYSTPQTEVKK-KLDPALLKD--------IAAYPSEEQMKGCE 327
Query: 331 FLEPLSEATLSDYE 344
L +A++ DY+
Sbjct: 328 VFVDL-DASIKDYD 340
>gi|225628044|ref|ZP_03786080.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617207|gb|EEH14253.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 381
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 115 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 171
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 172 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 224
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 225 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 284
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 285 LIWFDQMAIPADAK 298
>gi|153011248|ref|YP_001372462.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
49188]
gi|404318174|ref|ZP_10966107.1| extracellular solute-binding protein [Ochrobactrum anthropi
CTS-325]
gi|151563136|gb|ABS16633.1| extracellular solute-binding protein family 1 [Ochrobactrum
anthropi ATCC 49188]
Length = 367
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 101 DKDKLPNLKNMWDEISNR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 157
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 158 WDVLFDPEKSAKLKGCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 210
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +A+G+S D+ A R + +PK GA
Sbjct: 211 YLKIRPNIRKFHSSEYINALANGDICMAIGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 270
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 271 LIWFDQMAIPADAK 284
>gi|260565177|ref|ZP_05835661.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. 16M]
gi|261758783|ref|ZP_06002492.1| extracellular solute-binding protein family 1 [Brucella sp. F5/99]
gi|265999360|ref|ZP_06111663.1| extracellular solute-binding protein [Brucella melitensis bv. 2
str. 63/9]
gi|297248873|ref|ZP_06932591.1| putrescine transport system substrate-binding protein [Brucella
abortus bv. 5 str. B3196]
gi|260151245|gb|EEW86339.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. 16M]
gi|261738767|gb|EEY26763.1| extracellular solute-binding protein family 1 [Brucella sp. F5/99]
gi|263093442|gb|EEZ17492.1| extracellular solute-binding protein [Brucella melitensis bv. 2
str. 63/9]
gi|297176042|gb|EFH35389.1| putrescine transport system substrate-binding protein [Brucella
abortus bv. 5 str. B3196]
Length = 374
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 108 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 164
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 165 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 217
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 218 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 277
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 278 LIWFDQMAIPADAK 291
>gi|402702656|ref|ZP_10850635.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas fragi A22]
Length = 364
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 22/179 (12%)
Query: 82 VYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR- 139
V L+R A DP G +A PY WGT I Y K ++ + I+ W +++PE +
Sbjct: 111 VLLKRLQAN--DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDSIDSWDLVFKPENMKKL 167
Query: 140 ----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDST 194
++ ++S E++ +VL Y+G NS N D + A + L + F S+
Sbjct: 168 QSCGVAFLDSADEMLPTVLNYLGLDPNSTNPKDYKKA------EATLMSVRPYVTYFHSS 221
Query: 195 HYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAAS 247
Y+ G++ VA+G+S DV A K+ N+A +VPK G +LW D+ AIP S
Sbjct: 222 KYISDLANGNICVAIGFSGDVFQAKARAEEAKKGVNIAYIVPKEGGALWFDMLAIPKDS 280
>gi|107103124|ref|ZP_01367042.1| hypothetical protein PaerPA_01004193 [Pseudomonas aeruginosa PACS2]
Length = 354
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 35/234 (14%)
Query: 84 LRRNDAGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----EL 136
L AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++
Sbjct: 101 LNNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKI 159
Query: 137 AGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTH 195
GR+++++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSS 213
Query: 196 YLKAFGIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 249
Y+K +G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 214 YIKELTLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-- 271
Query: 250 ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ---------KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|62290491|ref|YP_222284.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella abortus
bv. 1 str. 9-941]
gi|82700414|ref|YP_414988.1| solute-binding family 1 protein [Brucella melitensis biovar Abortus
2308]
gi|260758545|ref|ZP_05870893.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
4 str. 292]
gi|260762368|ref|ZP_05874711.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
2 str. 86/8/59]
gi|376272658|ref|YP_005151236.1| Spermidine/putrescine-binding periplasmic protein [Brucella abortus
A13334]
gi|423166335|ref|ZP_17153038.1| hypothetical protein M17_00025 [Brucella abortus bv. 1 str. NI435a]
gi|423171291|ref|ZP_17157966.1| hypothetical protein M19_01824 [Brucella abortus bv. 1 str. NI474]
gi|423172627|ref|ZP_17159298.1| hypothetical protein M1A_00025 [Brucella abortus bv. 1 str. NI486]
gi|423178680|ref|ZP_17165324.1| hypothetical protein M1E_02920 [Brucella abortus bv. 1 str. NI488]
gi|423180722|ref|ZP_17167363.1| hypothetical protein M1G_01822 [Brucella abortus bv. 1 str. NI010]
gi|423183853|ref|ZP_17170490.1| hypothetical protein M1I_01822 [Brucella abortus bv. 1 str. NI016]
gi|423185207|ref|ZP_17171821.1| hypothetical protein M1K_00025 [Brucella abortus bv. 1 str. NI021]
gi|423188342|ref|ZP_17174952.1| hypothetical protein M1M_00024 [Brucella abortus bv. 1 str. NI259]
gi|62196623|gb|AAX74923.1| hypothetical spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella abortus
bv. 1 str. 9-941]
gi|82616515|emb|CAJ11584.1| Bacterial periplasmic spermidine/putrescine-binding
protein:Bacterial extracellular solute-binding protein,
family 1 [Brucella melitensis biovar Abortus 2308]
gi|260668863|gb|EEX55803.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
4 str. 292]
gi|260672800|gb|EEX59621.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
2 str. 86/8/59]
gi|363400263|gb|AEW17233.1| Spermidine/putrescine-binding periplasmic protein [Brucella abortus
A13334]
gi|374538625|gb|EHR10133.1| hypothetical protein M19_01824 [Brucella abortus bv. 1 str. NI474]
gi|374543819|gb|EHR15297.1| hypothetical protein M17_00025 [Brucella abortus bv. 1 str. NI435a]
gi|374544146|gb|EHR15623.1| hypothetical protein M1A_00025 [Brucella abortus bv. 1 str. NI486]
gi|374544734|gb|EHR16200.1| hypothetical protein M1E_02920 [Brucella abortus bv. 1 str. NI488]
gi|374548253|gb|EHR19705.1| hypothetical protein M1G_01822 [Brucella abortus bv. 1 str. NI010]
gi|374548681|gb|EHR20129.1| hypothetical protein M1I_01822 [Brucella abortus bv. 1 str. NI016]
gi|374558904|gb|EHR30293.1| hypothetical protein M1M_00024 [Brucella abortus bv. 1 str. NI259]
gi|374559917|gb|EHR31300.1| hypothetical protein M1K_00025 [Brucella abortus bv. 1 str. NI021]
Length = 367
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 101 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 157
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 158 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 210
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 211 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 270
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 271 LIWFDQMAIPADAK 284
>gi|189024715|ref|YP_001935483.1| spermidine/putrescine ABC transporter periplasmic protein [Brucella
abortus S19]
gi|237815998|ref|ZP_04594995.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|189020287|gb|ACD73009.1| hypothetical spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella abortus
S19]
gi|237789296|gb|EEP63507.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 381
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 115 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 171
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 172 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 224
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 225 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 284
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 285 LIWFDQMAIPADAK 298
>gi|37675937|ref|NP_936333.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio vulnificus YJ016]
gi|37200477|dbj|BAC96303.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio vulnificus
YJ016]
Length = 360
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 37/254 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP ++ PY WG I+Y +S AP+ W DLW + A ++ +++ R+V G
Sbjct: 133 DPNND-YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGM 187
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
LK G S N+ N D ++ ++L L N L++S + G+ V + W+
Sbjct: 188 ALKLNGYSINTKNED-EIK----KAYESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWN 242
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFC 272
+ M + V+P+ GA +W D + IP+ S+ + L H++I F
Sbjct: 243 GNAYQGQVEMPELKFVMPEEGAVMWMDNFTIPSGSKHKE------------LAHKFINFM 290
Query: 273 LQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEI-LARCE 330
Q + E++ SA LP+E LK P+ + PA+ + + E
Sbjct: 291 YQPEH----QAEIVNSLGYASATNAGRALLPDE-LKNNPT--------IFPADADVKKGE 337
Query: 331 FLEPLSEATLSDYE 344
F+ + LS YE
Sbjct: 338 FINDVGPEALSIYE 351
>gi|414162976|ref|ZP_11419223.1| hypothetical protein HMPREF9697_01124 [Afipia felis ATCC 53690]
gi|410880756|gb|EKS28596.1| hypothetical protein HMPREF9697_01124 [Afipia felis ATCC 53690]
Length = 363
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 53 SFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAY 112
++ ++++++ + D+ L++ W + R + DP G +AA Y WGT I Y
Sbjct: 80 AYFLQRQIVAGVFQKLDKTKLPNLANAWPEVMNR--LAQYDP-GNAYAANYMWGTTGIGY 136
Query: 113 KKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN 164
RK L P I+ W ++ PE + I M++S +++ + L ++G NS
Sbjct: 137 NVGTVRKI-LGPDAVIDSWDTIFDPEKIAKFKDCGIHMLDSADDILPAALNWLGLDPNST 195
Query: 165 NI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 223
DL+ A + +A + R F S+ YL A G++ +AVGWS D+ A KR +
Sbjct: 196 RREDLEKAA------EAVAKIRPYVRKFHSSEYLSALATGEICLAVGWSGDIKQAQKRAA 249
Query: 224 ------NVAVVVPKSGASLWADLWAIPAASR 248
+A +PK GA ++ D AIP+ ++
Sbjct: 250 ESNNGVEIAYAIPKEGAQMFFDNLAIPSDAK 280
>gi|16799874|ref|NP_470142.1| hypothetical protein lin0800 [Listeria innocua Clip11262]
gi|16413251|emb|CAC96032.1| lin0800 [Listeria innocua Clip11262]
Length = 357
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKSHLQAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+ E + LP+E+ S D P + L E + L
Sbjct: 289 ENA-AINAEYVGYATPN--EKAVKLLPKEI-----SGDERF---YPDMDELNNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|336249457|ref|YP_004593167.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter aerogenes KCTC 2190]
gi|444352385|ref|YP_007388529.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
gi|334735513|gb|AEG97888.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter aerogenes KCTC 2190]
gi|443903215|emb|CCG30989.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
Length = 370
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K L K + R+D P K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNW-KNLDPKVLQLVARHD-----PDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + P+ W + +PE + +S +++P E+ +VL
Sbjct: 133 YMWATTGIGYNVDKVKAALGKDVPLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFSTVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R N++ +PK GA + D++A+PA ++
Sbjct: 249 WQAANRAKEAKNGVNISYFIPKEGALAFFDVFAMPADAK 287
>gi|265995497|ref|ZP_06108054.1| extracellular solute-binding protein [Brucella melitensis bv. 3
str. Ether]
gi|262766610|gb|EEZ12399.1| extracellular solute-binding protein [Brucella melitensis bv. 3
str. Ether]
Length = 367
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 101 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 157
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 158 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 210
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 211 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 270
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 271 LIWFDQMAIPADAK 284
>gi|218890165|ref|YP_002439029.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
gi|218770388|emb|CAW26153.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
Length = 354
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 35/234 (14%)
Query: 84 LRRNDAGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----EL 136
L AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++
Sbjct: 101 LNNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKI 159
Query: 137 AGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTH 195
GR+++++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSS 213
Query: 196 YLKAFGIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 249
Y+K +G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 214 YIKELTLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-- 271
Query: 250 ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ---------KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|17986694|ref|NP_539328.1| putrescine-binding periplasmic protein [Brucella melitensis bv. 1
str. 16M]
gi|148559615|ref|YP_001259475.1| putative spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella ovis
ATCC 25840]
gi|163843860|ref|YP_001628264.1| hypothetical protein BSUIS_A1668 [Brucella suis ATCC 23445]
gi|225853084|ref|YP_002733317.1| hypothetical protein BMEA_A1665 [Brucella melitensis ATCC 23457]
gi|256370025|ref|YP_003107536.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brucella microti CCM 4915]
gi|260884340|ref|ZP_05895954.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
C68]
gi|261214589|ref|ZP_05928870.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
3 str. Tulya]
gi|261222745|ref|ZP_05937026.1| extracellular solute-binding protein [Brucella ceti B1/94]
gi|261315771|ref|ZP_05954968.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M163/99/10]
gi|261318214|ref|ZP_05957411.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis B2/94]
gi|261325666|ref|ZP_05964863.1| extracellular solute-binding protein [Brucella neotomae 5K33]
gi|261752893|ref|ZP_05996602.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5
str. 513]
gi|265989246|ref|ZP_06101803.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M292/94/1]
gi|265991659|ref|ZP_06104216.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. Rev.1]
gi|265998707|ref|ZP_06111264.1| extracellular solute-binding protein family 1 [Brucella ceti
M490/95/1]
gi|340791218|ref|YP_004756683.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella
pinnipedialis B2/94]
gi|384409079|ref|YP_005597700.1| extracellular solute-binding protein family 1 [Brucella melitensis
M28]
gi|17982315|gb|AAL51592.1| putrescine-binding periplasmic protein [Brucella melitensis bv. 1
str. 16M]
gi|148370872|gb|ABQ60851.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella ovis
ATCC 25840]
gi|163674583|gb|ABY38694.1| Hypothetical protein BSUIS_A1668 [Brucella suis ATCC 23445]
gi|225641449|gb|ACO01363.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|256000188|gb|ACU48587.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella microti CCM 4915]
gi|260873868|gb|EEX80937.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
C68]
gi|260916196|gb|EEX83057.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
3 str. Tulya]
gi|260921329|gb|EEX87982.1| extracellular solute-binding protein [Brucella ceti B1/94]
gi|261297437|gb|EEY00934.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis B2/94]
gi|261301646|gb|EEY05143.1| extracellular solute-binding protein [Brucella neotomae 5K33]
gi|261304797|gb|EEY08294.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M163/99/10]
gi|261742646|gb|EEY30572.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5
str. 513]
gi|262553331|gb|EEZ09165.1| extracellular solute-binding protein family 1 [Brucella ceti
M490/95/1]
gi|263002443|gb|EEZ15018.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. Rev.1]
gi|264661443|gb|EEZ31704.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M292/94/1]
gi|326409626|gb|ADZ66691.1| extracellular solute-binding protein family 1 [Brucella melitensis
M28]
gi|340559677|gb|AEK54915.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella
pinnipedialis B2/94]
Length = 367
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 101 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 157
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 158 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 210
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 211 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 270
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 271 LIWFDQMAIPADAK 284
>gi|254469276|ref|ZP_05082681.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
gi|211961111|gb|EEA96306.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
Length = 368
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 30/218 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V S+LS I+ + + + D++ L + W V R DP G ++
Sbjct: 80 DIVVPTGSFLSRQIQAGVFQKL----DKNALPNLKNMWSVVSDRTSI--YDP-GNDYSIN 132
Query: 103 YRWGTMVIAYK-KSKFRKHNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y ++ ++ + P++ W+ ++ P++ + I M+++P E+I + L +
Sbjct: 133 YMWGTTGIGYNVEAAAKRLDGKPVDSWEIIFNPDILAKFQDCGIHMLDAPTELIPAALNH 192
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSS 213
+G + +S++ K +++ LL + F S+ Y+ A GD+ +A+GWS
Sbjct: 193 LGLNPDSHD--------KADIEKAAELLKTIRPYVQKFHSSEYINALANGDICLAIGWSG 244
Query: 214 DVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
DV A R + V ++PK GA +W D AIP
Sbjct: 245 DVFQARDRAAEADNGVTVNYIIPKEGALMWFDQMAIPT 282
>gi|409436131|ref|ZP_11263323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
gi|408752041|emb|CCM74472.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
Length = 366
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP---I 125
D+ LS+ W + +R DP G +A Y WGT I Y K K + L P
Sbjct: 99 DKSKLPNLSNMWDMIQQRT--AMYDP-GNEYAVDYMWGTNGIGYNKKKLAEV-LGPDAKA 154
Query: 126 EDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQ 179
+ L+ P +A + I ++++P++VI S L Y+G NS+ DLQ AG +
Sbjct: 155 PGLEALFDPTVAEKFKDCGIYVLDAPKDVIPSALTYLGLDPNSSKPADLQKAG------E 208
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 233
L + R F S+ Y+ A GD+ +A G+S D+ A R + + +P G
Sbjct: 209 LLEKIRPFVRKFHSSEYINALANGDICIAFGYSGDIFQAANRATEAKNGVEIGYSIPSQG 268
Query: 234 ASLWADLWAIPAASR 248
A +W D+ AIPA ++
Sbjct: 269 AQMWFDMMAIPADAK 283
>gi|261219731|ref|ZP_05934012.1| extracellular solute-binding protein family 1 [Brucella ceti
M13/05/1]
gi|261322621|ref|ZP_05961818.1| extracellular solute-binding protein family 1 [Brucella ceti
M644/93/1]
gi|260924820|gb|EEX91388.1| extracellular solute-binding protein family 1 [Brucella ceti
M13/05/1]
gi|261295311|gb|EEX98807.1| extracellular solute-binding protein family 1 [Brucella ceti
M644/93/1]
Length = 367
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 101 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 157
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 158 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 210
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 211 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 270
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 271 LIWFDQMAIPADAK 284
>gi|397657008|ref|YP_006497710.1| putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
gi|394345525|gb|AFN31646.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
Length = 370
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAIP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + AP++ W + +PE + +S +++P E+ ++L
Sbjct: 133 YLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATLLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSTKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH- 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAHI 308
Query: 267 -QWIEFCLQTARALPFKQEVI 286
+ + ++P E I
Sbjct: 309 SDHVYYANGNKASVPLVSEAI 329
>gi|295096449|emb|CBK85539.1| Spermidine/putrescine-binding periplasmic protein [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 370
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPDVLKLVAKH------DPENK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y W T I Y K K L P ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKV-KAALGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVL 191
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ D
Sbjct: 192 NYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGD 247
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
V A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 248 VWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKEEAYQFLNYLMRPEVIAH 307
>gi|398953666|ref|ZP_10675497.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398153641|gb|EJM42138.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + + + ++ +W ++ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQTLDKSKLPNW----NNLNPVLLKNASASDPD---NAHAIP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + +K ++ AP W L++PE A + IS ++SP E+I + L
Sbjct: 129 YMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPTALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G Y N+ D Q + Q AL F S+ Y+ G++ VAVG+S
Sbjct: 189 YLG--YPVNDQDKQ------HIAQAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYS 240
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL 264
DVL A R + +PK GA+ + D+ AIP AA+ + P +
Sbjct: 241 GDVLQAKARAQEAGDRVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVI 300
Query: 265 --IHQWIEFCLQTARALPFKQEVI---PGASPS-ALETTLVKLPEE 304
I I + A A P E I PG+ PS A+ TL +P++
Sbjct: 301 ADITNNIGYSNANAAATPLVDEAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|424925503|ref|ZP_18348864.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404306663|gb|EJZ60625.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 365
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGIDKIDSWSVLFEPENIKKLHSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPKDYAKATDK------LLAVRPYVTYFHSSKYIGDLANGDI 233
Query: 206 WVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A K+ N+A +PK G +LW D+ AIP S
Sbjct: 234 CVAIGFSGDIFQAKHRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|329767050|ref|ZP_08258578.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
gi|328837775|gb|EGF87400.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
Length = 359
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP + ++ PY WGT+ + Y K+K + E W DLW LA I +++ RE++G
Sbjct: 125 FDPNNE-FSIPYFWGTLGVLYNKTKVPED--LKFEKWNDLWDTRLANNILLIDGAREMMG 181
Query: 152 SVLKYMGASYN-SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
L+ G S N +N ++L +A ++ L LL + ++ + W +V
Sbjct: 182 IALQSEGNSVNDTNEVNLNLA------ERKLELLHPNVKAINADEKKMLMINNEAWASVV 235
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
+S D + N+ +PK G +LW D IP S+ E +++I
Sbjct: 236 FSGDAKAIMGENENMVYALPKEGTNLWFDNIVIPKTSKNEEAA------------YKFIN 283
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEE 304
F L+ A E I A+P+ L LPEE
Sbjct: 284 FMLKPENAAK-NSEFIGYATPNTKAKEL--LPEE 314
>gi|22537266|ref|NP_688117.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae 2603V/R]
gi|77413025|ref|ZP_00789227.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|410594609|ref|YP_006951336.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
gi|421532211|ref|ZP_15978578.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|22534134|gb|AAM99989.1|AE014242_18 spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 2603V/R]
gi|77160923|gb|EAO72032.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|403642577|gb|EJZ03410.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|410518248|gb|AFV72392.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
Length = 357
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G N+ NI +L+ A K+ ++ N+ A++A++ +K + I GD +
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADE---------MKGYMIQGDAAI 232
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + + ++ VVP G++LW D IP +
Sbjct: 233 GVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|403237367|ref|ZP_10915953.1| spermidine:putrescine ABC transporter [Bacillus sp. 10403023]
Length = 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP G ++ PY WGT+ I Y + W DLW P L I V+ RE++G
Sbjct: 126 FDP-GNQYSVPYFWGTVGIVYNPTMLDGKEFTS---WNDLWDPSLKNEIIFVDGAREIMG 181
Query: 152 SVLKYMGASYNSNNID--LQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S N N+D ++ I + N+ A++ ++ ++ + +
Sbjct: 182 MGLNSLGYSLNDTNLDHLMEAKDKLIKLTPNVKAIVGDEGKVLIQNR--------EAAIG 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
+ WS D + ++ VVP G++LW D IP + K I G HQ+
Sbjct: 234 IVWSGDAADIMWENEDLNYVVPSEGSNLWFDNMVIPKTA----KNIDGA--------HQF 281
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I F L A E + ++P+ + L +PE+++ + P E+ +
Sbjct: 282 INFMLDAEIAAQ-NTEYVSYSTPN--KEALQYMPEDMVTDERF--------YPSPELTEK 330
Query: 329 CEFLEPLSEATLSDYEWLVADLQ 351
E E L + L+ Y L + +
Sbjct: 331 LEVYENLGKKNLAIYNQLFLEFK 353
>gi|293374080|ref|ZP_06620416.1| bacterial extracellular solute-binding protein [Turicibacter
sanguinis PC909]
gi|292647287|gb|EFF65261.1| bacterial extracellular solute-binding protein [Turicibacter
sanguinis PC909]
Length = 348
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ K+KA Y D+ D + IK+ L+ P+ ++ + F+ +S +K
Sbjct: 64 YQKIKAGGTNY---DVAFPSDYMVEKMIKENLVLPLDYSKIPN-FEYISDAYK------- 112
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
DP ++ PY WGT+ I Y K+ ++ P++ W LW + G I M +S R+
Sbjct: 113 NLPYDP-DNLYTVPYFWGTVGILYDKTVVKE----PVDSWSILWDEDYKGNIFMYDSQRD 167
Query: 149 VIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARL---FDSTHYLKAFGIGDV 205
+ LK +G S N+ NID ++Q LL +Q L + + + G+
Sbjct: 168 SLMVALKLLGYSMNTQNID--------ELEQAKQLLIDQRPLVYAYVTDQVIDNMIAGNA 219
Query: 206 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLI 265
+AV +S D + N+ +PK G++ W D IP+ ++ L
Sbjct: 220 ALAVVYSGDATYIMDENENMEYAIPKEGSNTWVDAMVIPSTAQ------------NVDLA 267
Query: 266 HQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQD 313
H++I F + AL E + ++P+ ET + EE + PSQD
Sbjct: 268 HEFINFMQRPEIAL-MNTEYVMYSTPNT-ETLEMVSEEEWTQNDAYSPSQD 316
>gi|389690758|ref|ZP_10179651.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
gi|388589001|gb|EIM29290.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
Length = 361
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRP 134
L+++W +R DP G +A Y WGT I K ++ P+ W + +P
Sbjct: 102 LANQWPEVTQR--LAVFDP-GNQYAVNYMWGTTGIGLNVKKVKEILGDMPLNTWDLVLKP 158
Query: 135 ELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQA 188
E+A + I M++SP ++ VL Y+G + +S DL AG L +
Sbjct: 159 EIASKLKACGIYMLDSPEDLFPGVLAYLGLNPDSKRTEDLNKAGDA------LFRIRGNI 212
Query: 189 RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWA 242
+ F S+ Y+ A GD+ VAVG+S D++ A R V V+P+ GA +W D +A
Sbjct: 213 QKFHSSEYINALANGDICVAVGYSGDMIQAKNRAEEAKNGVEVGYVIPREGALMWFDSFA 272
Query: 243 IPAASR 248
IPA ++
Sbjct: 273 IPADAK 278
>gi|77405839|ref|ZP_00782922.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
gi|77175549|gb|EAO78335.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
Length = 357
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G N+ NI +L+ A K+ ++ N+ A++A++ +K + I GD +
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADE---------MKGYMIQGDAAI 232
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + + ++ VVP G++LW D IP +
Sbjct: 233 GVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|339301436|ref|ZP_08650537.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
gi|319745106|gb|EFV97431.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
Length = 357
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G N+ NI +L+ A K+ ++ N+ A++A++ +K + I GD +
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADE---------MKGYMIQGDAAI 232
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + + ++ VVP G++LW D IP +
Sbjct: 233 GVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|388468123|ref|ZP_10142333.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
gi|388011703|gb|EIK72890.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
Length = 366
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L + L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 107 FKNLDPRLLKLLEQNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGIERIDSWAVL 160
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLA 185
+ P+ + ++ ++SP E+ ++L YMG S N D + A K L L
Sbjct: 161 FEPDNLKKLHECGVAFLDSPDELFPAILNYMGKDPRSENAEDYKQAEAK------LLTLR 214
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ G++ VA G+S DV A R N+A +P+ G++LW D
Sbjct: 215 PYITYFHSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPREGSNLWFD 274
Query: 240 LWAIPA 245
L AIPA
Sbjct: 275 LLAIPA 280
>gi|307947450|ref|ZP_07662783.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
gi|307769268|gb|EFO28496.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
Length = 363
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIE 126
D+ LS+ WK R + + DP G ++ Y WGT + Y K + AP++
Sbjct: 96 DKSKLSNLSNMWKDIEARVE--KYDP-GNAYSINYMWGTTGLGYNVEKVKAALGEDAPVD 152
Query: 127 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQN 180
W L++ E + + ++++P E+I + L Y+G +S + D++ AG +
Sbjct: 153 SWDLLFKEENISKLKDCGVHLLDAPTELIPAALNYLGMDPDSKDKGDIEKAG------EL 206
Query: 181 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + + F S+ Y+ A GD+ VAVGWS DVL A R + V +PK GA
Sbjct: 207 LKTIRPYVQKFHSSEYINALANGDICVAVGWSGDVLQARDRAAEADNGVTVEYSIPKEGA 266
Query: 235 SLWADLWAIPA 245
+W D A+PA
Sbjct: 267 LMWFDQMAVPA 277
>gi|384211966|ref|YP_005601048.1| hypothetical protein [Brucella melitensis M5-90]
gi|384445637|ref|YP_005604356.1| hypothetical protein [Brucella melitensis NI]
gi|326539329|gb|ADZ87544.1| conserved hypothetical protein [Brucella melitensis M5-90]
gi|349743626|gb|AEQ09169.1| hypothetical protein BMNI_I1550 [Brucella melitensis NI]
Length = 368
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 102 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDS 158
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 159 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 211
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 212 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 271
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 272 LIWFDQMAIPADAK 285
>gi|25011226|ref|NP_735621.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae NEM316]
gi|76797917|ref|ZP_00780179.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77408716|ref|ZP_00785448.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|77410532|ref|ZP_00786893.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|421147260|ref|ZP_15606950.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
gi|23095650|emb|CAD46834.1| Unknown [Streptococcus agalactiae NEM316]
gi|76586754|gb|EAO63250.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77163480|gb|EAO74430.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|77172691|gb|EAO75828.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|401685938|gb|EJS81928.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
Length = 357
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G N+ NI +L+ A K+ ++ N+ A++A++ +K + I GD +
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADE---------MKGYMIQGDAAI 232
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + + ++ VVP G++LW D IP +
Sbjct: 233 GVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|423694163|ref|ZP_17668683.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
gi|388000415|gb|EIK61744.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
Length = 364
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K ++ + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKQVLGVDKIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS N D + A ++ L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLDPNSTNPADYKKA------EEKLLKVRPYVTYFHSSKYISDLANGNI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 233 CVAAGFSGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIP 277
>gi|378960182|ref|YP_005217668.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Typhi str.
P-stx-12]
gi|374354054|gb|AEZ45815.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Typhi str.
P-stx-12]
Length = 371
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK G + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGVMAFFDVFAMPADAK 288
>gi|456012794|gb|EMF46482.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Planococcus halocryophilus Or1]
Length = 358
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 107/261 (40%), Gaps = 34/261 (13%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP G ++ PY WGT+ IA+ + E W DLW P L + +V+S RE+IG
Sbjct: 126 FDP-GNEYSIPYFWGTVGIAFNPTLLEGQTF---ESWDDLWNPSLEQEVILVDSAREIIG 181
Query: 152 SVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
L +G S NS N+D L+ A K L + + ++ + VAV
Sbjct: 182 LGLNSLGYSLNSTNVDELREATDK------LKTMGPNVKAIIGDEIVELMRREEAAVAVT 235
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
WS + ++ VPK G++LW D IP + G + G H +I
Sbjct: 236 WSGQAADMMWINEDIDYSVPKEGSNLWFDNMIIP--------KTAGNIEGA----HAFIN 283
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F L A + + ++P+ TL+ PE ++D PP E+ R E
Sbjct: 284 FMLDPEVAAQ-NADYVGYSTPNEKAVTLMD-PE------VTEDERF---YPPVELRERLE 332
Query: 331 FLEPLSEATLSDYEWLVADLQ 351
E L L Y L + +
Sbjct: 333 VYENLGLEMLGTYNELFLEFK 353
>gi|16759787|ref|NP_455404.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142440|ref|NP_805782.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213855242|ref|ZP_03383482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289825027|ref|ZP_06544390.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25358046|pir||AB0606 putrescine-binding periplasmic protein precursor [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16502080|emb|CAD05316.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138070|gb|AAO69631.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 370
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS+ D G + L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK G + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGVMAFFDVFAMPADAK 287
>gi|421158598|ref|ZP_15617845.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
gi|404549479|gb|EKA58338.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
Length = 354
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 164
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 165 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 218
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 271
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|222100190|ref|YP_002534758.1| spermidine/putrescine ABC transporter substrate-binding protein
[Thermotoga neapolitana DSM 4359]
gi|221572580|gb|ACM23392.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Thermotoga
neapolitana DSM 4359]
Length = 335
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 43/249 (17%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP + ++ PY G+ V+ + +++ + W R +L GR+++++ REV+G+
Sbjct: 114 DPNHE-YSVPYMMGSTVVIVNRKYVKEYE----KSWSIFEREDLRGRMTLLDDMREVLGA 168
Query: 153 VLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
LKY+G S N+ N +L+ A Q L N A+ FD+T Y G+ WV G+
Sbjct: 169 ALKYLGYSVNTKNPKELEEAK-----QVVLRWKKNIAK-FDATSYADGVVTGEYWVVHGY 222
Query: 212 SSDVLPAV--KRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
+ DV + N +PK G +LW D IP ++ L +++I
Sbjct: 223 AEDVYQRIPEGEEENFDFFIPKEGGTLWIDNMVIPKGAK------------NVDLAYEFI 270
Query: 270 EFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARC 329
F L+ A A + LP ++ + +T I + E L C
Sbjct: 271 NFLLEPQNA--------------AKIADYLGLPSPNVEARKYMETEPIYTL---EDLKNC 313
Query: 330 EFLEPLSEA 338
EF+E + EA
Sbjct: 314 EFIEDVGEA 322
>gi|397688814|ref|YP_006526133.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810370|gb|AFN79775.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 361
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYK-KSKFRKHNLAPIEDWKDLWRPE----LAG 138
L++ND G AAPY WGT I Y +S + ++ W ++ PE LAG
Sbjct: 113 LQKNDPG------NTHAAPYLWGTNGIGYNVESVTAALGIEKVDSWAVIFEPENAKKLAG 166
Query: 139 -RISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYL 197
I+ ++S E+I ++L Y+G NS N D + L + R F S+ Y+
Sbjct: 167 CGIAFLDSADEMIPAMLNYLGLDPNSENPD-----DYAKAEAKLLEVRPYVRYFHSSKYV 221
Query: 198 KAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
G++ +A G+S DV A R ++A +PK G +LW D+ AIPA ++
Sbjct: 222 SDLANGNICIAAGFSGDVFQAAARADEAGKGIDIAYAIPKEGGNLWFDMLAIPADAQ 278
>gi|374574738|ref|ZP_09647834.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM471]
gi|374423059|gb|EHR02592.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM471]
Length = 368
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G ++AA Y WGT I Y +K ++ A IE W +++PE + + M++S
Sbjct: 123 DP-GNVYAANYMWGTTGIGYNVAKLKQILGADAKIESWDIVFKPENLAKFKDCGVHMLDS 181
Query: 146 PREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
++ + L Y+G NS DL A + A + R F S+ YL A G+
Sbjct: 182 ADDIFPAALNYLGLDPNSTKQADLDKAADVV------AKVRPSVRKFHSSEYLSALATGE 235
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VGWS D++ A R + + +PK GA ++ D AIPA +R
Sbjct: 236 ICFVVGWSGDIMQARARAAEAKSGIEIGYAIPKEGAQMFFDNLAIPADAR 285
>gi|416854709|ref|ZP_11911066.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|421518153|ref|ZP_15964827.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451987812|ref|ZP_21935964.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|334843692|gb|EGM22277.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|404347635|gb|EJZ73984.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451754571|emb|CCQ88487.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|453047383|gb|EME95097.1| polyamine transporter PotD [Pseudomonas aeruginosa PA21_ST175]
Length = 353
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 164 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 217
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 218 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 270
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 271 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|387896228|ref|YP_006326525.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
gi|387164086|gb|AFJ59285.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
Length = 364
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K ++ + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDKIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS N D + A ++ L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLDPNSTNPADYKKA------EEKLLKVRPYVTYFHSSKYISDLANGNI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 233 CVAAGFSGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIP 277
>gi|163751564|ref|ZP_02158786.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
gi|161328572|gb|EDP99725.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
Length = 366
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNS 145
DP+ K +A PY WGT I Y K + P + + L+ P+ A +IS M++S
Sbjct: 121 DPQNK-FAVPYLWGTTGIGYNLEKVKAVLGEEPPFDSLELLFNPKYAEKISSCGFSMMDS 179
Query: 146 PREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
E++ L Y+ NS N D ++AG + +A + F S+ Y+ GD
Sbjct: 180 ADEMMSQALTYLKLDPNSTNPDDYKLAG------EAIAKVRPYVTYFHSSRYIIDLANGD 233
Query: 205 VWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
+ VA G+S D+ A R ++ +PK GA+LW D+ AIPA ++
Sbjct: 234 ICVAFGYSGDIFQAAARAEEADNGQVISYAIPKEGANLWFDMLAIPADAK 283
>gi|313108968|ref|ZP_07794943.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|386067645|ref|YP_005982949.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
gi|310881445|gb|EFQ40039.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|348036204|dbj|BAK91564.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
Length = 353
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 164 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 217
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 218 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 270
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 271 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|397697187|ref|YP_006535070.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|421523437|ref|ZP_15970066.1| extracellular solute-binding protein [Pseudomonas putida LS46]
gi|397333917|gb|AFO50276.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|402752423|gb|EJX12928.1| extracellular solute-binding protein [Pseudomonas putida LS46]
Length = 364
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG + NS + +Q L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLNPNSTD-----PKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDIC 233
Query: 207 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 234 VAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|374703154|ref|ZP_09710024.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 364
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W +++PE + +SM+++P
Sbjct: 120 DP-GNQYAFPYLWGTTGIGYNPEKVKAALGIDKIDSWDIIFKPENMDKLKSCGVSMLDAP 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
EV + L Y+G N I V K ++ L + F S+ Y+ G++
Sbjct: 179 EEVYAAALHYLGL----NPIAQSVEDVK-KAEELLLKVRPDVTYFHSSKYISDLANGNIC 233
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRL--ETKQIGGRV 258
VA+GWS DV A R V+ V+PK GA+ + D+ AIPA ++ E +
Sbjct: 234 VALGWSGDVFQAEARAEEAKNGVPVSYVIPKEGAAAFFDMMAIPADAKNADEAYTFLNYI 293
Query: 259 RGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 292
P + I ++ + A A P E I PG P+
Sbjct: 294 LKPEVIAPISDYVAYPNGNAAATPLVSEEIRNNPGIYPT 332
>gi|424939578|ref|ZP_18355341.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
gi|346056024|dbj|GAA15907.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
Length = 353
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 164 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 217
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 218 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 270
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 271 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|260755322|ref|ZP_05867670.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
6 str. 870]
gi|260675430|gb|EEX62251.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
6 str. 870]
Length = 367
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G ++ Y WGT I Y K+K ++ I+
Sbjct: 101 DKDKLPNLKNMWDEISTR--AATYDP-GNEYSVNYMWGTAGIGYNKAKIKEALGTDTIDS 157
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 158 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 210
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 234
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK GA
Sbjct: 211 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGA 270
Query: 235 SLWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 271 LIWFDQMAIPADAK 284
>gi|15598806|ref|NP_252300.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO1]
gi|254236526|ref|ZP_04929849.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|254242308|ref|ZP_04935630.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|418586155|ref|ZP_13150201.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|418589417|ref|ZP_13153339.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|421152581|ref|ZP_15612161.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|421179226|ref|ZP_15636822.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
gi|9949767|gb|AAG06998.1|AE004781_6 polyamine transport protein PotD [Pseudomonas aeruginosa PAO1]
gi|126168457|gb|EAZ53968.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|126195686|gb|EAZ59749.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|375043829|gb|EHS36445.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|375051651|gb|EHS44117.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|404525341|gb|EKA35617.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|404547469|gb|EKA56467.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
Length = 354
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 164
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 165 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 218
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 271
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|398927515|ref|ZP_10662982.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398169659|gb|EJM57635.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 365
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 41/287 (14%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + + + ++ +W K L+ V L+ +A DP A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQTLDKSKLTNW-KNLN---PVLLK--NASASDPENA-HAIP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + K R+ AP W L++PE A + IS ++SP E++ + L
Sbjct: 129 YMWGSIGIGFNPQKVREVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPTALH 188
Query: 156 YMGASYNSNNIDLQ-VAGGK---ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
Y+G Y N+ D Q +A + + ++ N+A F S+ Y+ G++ VAVG+
Sbjct: 189 YLG--YPVNDQDKQHIAEAEALFMKIRPNVAY-------FHSSKYISDLANGNICVAVGY 239
Query: 212 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSP 263
S DVL A R + +PK GA+ + D+ AIP AA+ + P
Sbjct: 240 SGDVLQAKARAQEAGDKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDV 299
Query: 264 L--IHQWIEFCLQTARALPFKQEVI---PGASPS-ALETTLVKLPEE 304
+ I I + A A P E I PG+ PS A+ TL +P++
Sbjct: 300 IADITNNIGYSNANAAATPLVDEAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|383814371|ref|ZP_09969792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
gi|383296781|gb|EIC85094.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
Length = 368
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY W T I Y K + AP+ W + P+ + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAALGKDAPVNSWDLVLNPDNLAKLKGCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+ NS + A + L L R F S+ Y+ GD+
Sbjct: 182 PAEIYATVLNYLHLDPNSTKPEDYTAATDL-----LLKLRPSIRYFHSSQYINDLANGDI 236
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRL--ETKQIGGR 257
VAVGW+ DV+ A R N+A +PK GA + D++A+PA ++ E Q
Sbjct: 237 CVAVGWAGDVIQASNRAKEAKNGVNIAYSIPKEGALAFFDVFAMPADAKNTDEAYQFLNY 296
Query: 258 VRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 293
+ P + I + + A A P + I PG PSA
Sbjct: 297 LMRPEVMAGISNAVFYASGNAAATPLVKPEIRNNPGIYPSA 337
>gi|367471729|ref|ZP_09471334.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 285]
gi|365276048|emb|CCD83802.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 285]
Length = 368
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +L IK ++ +P+ D+ L++ W V R DP G +AA
Sbjct: 79 DVVVPTAYFLQRQIKAKIFQPL----DKSKLPNLANAWPVVTER--LAIYDP-GNQFAAN 131
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT I Y K A I+ W +++PE + + M++S ++ + L
Sbjct: 132 YMWGTTGIGYNVKTIEKIFGAGARIDSWDMVFKPENLAKFKDCGVHMLDSADDIFPAALN 191
Query: 156 YMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS DL+ A + +A+ R F S+ YL A G++ + VGWS D
Sbjct: 192 YLGLDPNSTKQADLEKAADVV------GKVASSVRKFHSSEYLSALATGEICLVVGWSGD 245
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
++ A R + +PK GA ++ D AIPA ++
Sbjct: 246 IMQARSRAEEAKNGIEIGYAIPKEGAQMFFDNLAIPADAQ 285
>gi|283784617|ref|YP_003364482.1| putrescine ABC transporter substrate-binding protein [Citrobacter
rodentium ICC168]
gi|282948071|emb|CBG87636.1| putrescine ABC transporter, substrate-binding protein [Citrobacter
rodentium ICC168]
Length = 370
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGADAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P EV +VL Y+G NS + A +L L L R F S+ Y+ GD
Sbjct: 183 PEEVFATVLNYLGKDPNSTD-----AKDYTGPATDLLLKLRPNIRYFHSSQYINDLANGD 237
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 TCVAIGWAGDVWQAANRAKEAKNGINISFSIPKEGAMAFFDVFAMPADAK 287
>gi|386014451|ref|YP_005932728.1| PotF [Pseudomonas putida BIRD-1]
gi|313501157|gb|ADR62523.1| PotF [Pseudomonas putida BIRD-1]
Length = 364
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNEYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG + NS + +Q L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLNPNSTD-----PKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDIC 233
Query: 207 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 234 VAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|440739397|ref|ZP_20918911.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens BRIP34879]
gi|447918914|ref|YP_007399482.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas poae RE*1-1-14]
gi|440379593|gb|ELQ16183.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens BRIP34879]
gi|445202777|gb|AGE27986.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas poae RE*1-1-14]
Length = 364
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K ++ + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNAYAVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLASCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS N D + A ++ L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLDPNSTNPADYKKA------EEKLLKVRPYVTYFHSSKYISDLANGNI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 233 CVAAGFSGDVFQAKARAAEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|26991856|ref|NP_747281.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas putida KT2440]
gi|24986974|gb|AAN70745.1|AE016718_4 putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas putida KT2440]
Length = 364
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG + NS + +Q L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLNPNSTD-----PKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDIC 233
Query: 207 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 234 VAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|422654041|ref|ZP_16716794.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330967077|gb|EGH67337.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 364
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ ++L Y+G S NS N D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAMLNYLGLSPNSTNEADYKKAEAK------LLAIRPHVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|420138192|ref|ZP_14646132.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
gi|403249045|gb|EJY62561.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
Length = 354
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 164
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 165 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 218
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 271
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|443470634|ref|ZP_21060717.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442900404|gb|ELS26546.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 367
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 136/314 (43%), Gaps = 56/314 (17%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + L IK ++EP+ A+ + K + + L ND G +A P
Sbjct: 78 DVVVASNFSLPTLIKAGVLEPLDPAKLPN-LKHIDPELLAKLASNDPG------NRYAVP 130
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLK 155
Y WGT I Y K R AP++ W L++ E R+S +++SP E++ VL+
Sbjct: 131 YMWGTNGIGYNVDKVRAALGEQAPVDSWDLLFKEENLARLSQCGVALLDSPSEILPIVLQ 190
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G NSNN D Q+ ALL F+S+ ++ GD+ VAVGW+
Sbjct: 191 YLGLPPNSNNPD--------DYQKAEALLLKLRPHIAYFNSSKFITDLSNGDICVAVGWA 242
Query: 213 SDVLP----AVKRMSNVAV--VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIH 266
+L AV+ + V + +PK GA LW D + KQ +G +
Sbjct: 243 GGMLDAKANAVQAGNGVRIEYSLPKEGAPLWFDTLVL-------LKQAPHPAQGLA---- 291
Query: 267 QWIEFCLQTARALPFKQEV-IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEI 325
+I++ ++ P + P + SA T LV ++ N P AE
Sbjct: 292 -FIDYLMRPEVIAPITDYLRYPNGNRSA--TPLVS----------AETRNNPAVYPSAET 338
Query: 326 LARCEFLEPLSEAT 339
+AR LEPL + T
Sbjct: 339 MARLFTLEPLPKKT 352
>gi|395446064|ref|YP_006386317.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|388560061|gb|AFK69202.1| extracellular solute-binding protein [Pseudomonas putida ND6]
Length = 364
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG + NS + +Q L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLNPNSTD-----PKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDIC 233
Query: 207 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 234 VAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|388543373|ref|ZP_10146664.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
gi|388278685|gb|EIK98256.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
Length = 362
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 37 APYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRG 96
A + D+V + +L +K + ++ +W K L K L +ND G
Sbjct: 68 AGHTGYDVVVPSNHFLGRQVKAGAFLKLDRSQLPNW-KNLDPKLMALLEKNDPGNEH--- 123
Query: 97 KIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVI 150
+ PY WGT I Y K ++ + I+ W L+ PE + +SM++S EV+
Sbjct: 124 ---SVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLSKCGVSMMDSADEVM 180
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
+VL YMG S+ + V+ L + F S+ Y+ G++ VA G
Sbjct: 181 PAVLNYMGMDPRSSKPE-----DYAKVKAKLKAVRPYVTYFHSSKYVSDLANGNICVAFG 235
Query: 211 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
+S DV A R ++A +PK GA+LW DL AIPA
Sbjct: 236 YSGDVFQAANRAKEAKNGIHIAYAIPKEGANLWFDLLAIPA 276
>gi|375262549|ref|YP_005024779.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. EJY3]
gi|369842977|gb|AEX23805.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. EJY3]
Length = 344
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 37/254 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP ++ PY WG I+Y +S + P+ W DLW ++ +++ R+V G
Sbjct: 117 DPNND-YSLPYIWGVTGISYNESMVEQ----PVTKWADLWDAHYEQQVMLIDDIRDVFGM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
LK G S NS N + ++ ++L L N L++S + G+ V + W+
Sbjct: 172 ALKMNGHSVNSKN-EAEIK----QAYESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWN 226
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFC 272
+ M + V+P GA LW D + IP+ S + L H++I F
Sbjct: 227 GNAYQGQVEMPELKFVMPAEGAVLWMDNFTIPSGSENKV------------LAHKFINFM 274
Query: 273 LQTARALPFKQEVIPGASPSALETTLVK--LPEELLKGKPSQDTNLIVGVPPAEILARCE 330
Q P Q I + A T + LP+EL N P + L + E
Sbjct: 275 YQ-----PQNQAEIVNSLGYASATNAGRNLLPDEL--------KNNATIFPAEDDLEKGE 321
Query: 331 FLEPLSEATLSDYE 344
F+ + TL+ YE
Sbjct: 322 FINDVGAETLAIYE 335
>gi|416874859|ref|ZP_11918408.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
gi|334842601|gb|EGM21205.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
Length = 354
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 34/219 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 164
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 165 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQTLILAAKPYWAAFNSSSYIKEL 218
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 271
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 293
+ P L +++I+F L A ++ G +P+A
Sbjct: 272 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNA 304
>gi|299133628|ref|ZP_07026822.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
gi|298591464|gb|EFI51665.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
Length = 363
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 53 SFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAY 112
++ ++++++ + D+ L + W + N + DP G ++AA Y WGT I Y
Sbjct: 80 AYFLQRQIVAGVFQKLDKSKLPNLKNAWPEVM--NHLAQYDP-GNLYAANYMWGTTGIGY 136
Query: 113 KKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN 164
S K L P I+ W ++ PE + I M++S +++ + L ++G NS
Sbjct: 137 NVSAVHKI-LGPNAVIDSWDTIFNPEKIAKFKDCGIHMLDSADDILPAALNWLGLDPNST 195
Query: 165 NI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 223
DL+ A + +A + R F S+ YL A G++ +AVGWS D+ A KR +
Sbjct: 196 RREDLEKAA------EVVAKIRPYVRKFHSSEYLSALATGEICLAVGWSGDIKQAQKRAA 249
Query: 224 ------NVAVVVPKSGASLWADLWAIPAASR 248
+A +PK GA ++ D AIP+ ++
Sbjct: 250 ESNNGVEIAYAIPKEGAQMFFDNLAIPSDAK 280
>gi|296387886|ref|ZP_06877361.1| polyamine ABC transporter [Pseudomonas aeruginosa PAb1]
Length = 353
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 34/219 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 164 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQTLILAAKPYWAAFNSSSYIKEL 217
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 218 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 270
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 293
+ P L +++I+F L A ++ G +P+A
Sbjct: 271 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNA 303
>gi|1573475|gb|AAC22155.1| spermidine/putrescine ABC transporter, periplasmic-binding protein
(potD) [Haemophilus influenzae Rd KW20]
Length = 312
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 43 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 93
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 94 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 150
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 151 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 204
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 205 NQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEG----AHKFIDFLLRPENA 249
>gi|418825311|ref|ZP_13380614.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392816284|gb|EJA72213.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
Length = 325
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 79 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 137
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+ NS+ D G + L L R F S+ Y+ GD
Sbjct: 138 PEEIFATVLNYLDKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 193
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 194 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 242
>gi|398848447|ref|ZP_10605262.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398248364|gb|EJN33781.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 364
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG + NS + A ++ L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLNPNSTD-----AKDYEKAEKKLLAVRPYVTYFHSSKYITDLANGDIC 233
Query: 207 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 234 VAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|398892965|ref|ZP_10645887.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398184856|gb|EJM72287.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 414
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 39/286 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + + + ++ +W K L+ V L+ A + D A P
Sbjct: 125 DIVVPSNSFLAKQIKAGVYQTLDKSKLANW-KNLN---PVLLKNASASDPD---NAHAIP 177
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + K ++ + AP W L++PE A + IS ++SP E+I + L
Sbjct: 178 YMWGSIGIGFNPQKVKEVLGSNAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPTALH 237
Query: 156 YMGASYNSNNIDLQVAGGK---ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G N N +A + + ++ N+A F S+ Y+ G++ VAVG+S
Sbjct: 238 YLGYPVNDQN-KQHIAEAEALFMKIRPNVAY-------FHSSKYISDLANGNICVAVGYS 289
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL 264
DVL A R + +PK GA+ + D+ AIP AA+ + P +
Sbjct: 290 GDVLQAKARAQEAGNKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVI 349
Query: 265 --IHQWIEFCLQTARALPFKQEVI---PGA-SPSALETTLVKLPEE 304
I I + A A P E I PG+ P A+ TL +P++
Sbjct: 350 ADITNNIGYSNANAAATPLVDEAIRNDPGSYPPEAVMATLYAVPDQ 395
>gi|90423608|ref|YP_531978.1| extracellular solute-binding protein [Rhodopseudomonas palustris
BisB18]
gi|90105622|gb|ABD87659.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas
palustris BisB18]
Length = 371
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 53 SFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAY 112
++ +++++ I D+ L + W V +R DP G +AA Y WGT I Y
Sbjct: 88 AYFLQRQIAANIFQKLDKAKLPNLGNAWDVVTKR--LATYDP-GNRFAANYMWGTTGIGY 144
Query: 113 KKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN 165
+ RK A I+ W +++PE + + M++SP +++ + L Y+G NS
Sbjct: 145 NVAAVRKILGEGAVIDSWATVFKPENLAKFTECGVHMLDSPDDILPAALTYLGLDPNSTK 204
Query: 166 -IDLQVAG---GKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
DL+ A GKI R F S+ YL A G++ + V WS D++ A R
Sbjct: 205 PADLEKAADLVGKIRPY---------VRKFHSSEYLNALATGEICLVVAWSGDIMQARSR 255
Query: 222 MS------NVAVVVPKSGASLWADLWAIPAASR 248
+ + +PK GA ++ D AIPA ++
Sbjct: 256 TAEANNGVEIGYSIPKEGAQMFFDNLAIPADAK 288
>gi|269104186|ref|ZP_06156882.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Photobacterium damselae subsp. damselae CIP
102761]
gi|268160826|gb|EEZ39323.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Photobacterium damselae subsp. damselae CIP
102761]
Length = 343
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 33/248 (13%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
E DP+ ++APY WG I+Y PI WKDLW + A ++ +++ R+V
Sbjct: 116 EFDPKND-YSAPYVWGVTGISYNSELVT----TPITGWKDLWNADFARQVMLLDDVRDVF 170
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
G LK G S N+ N + ++ S+Q+ L +++S + G+ + +
Sbjct: 171 GMALKAQGHSINTTN-EAEIKQAYESLQK----LRPNVVVYNSDAPHVPYVTGEASIGMQ 225
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
W+ + A + M + V PK G+ LW D + IPA S L ++I
Sbjct: 226 WNGNAYMAKQEMKELEFVYPKEGSILWMDNFIIPAGS------------ANKELAEKFIN 273
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F + +E P A + LP+E+ QD +I P E + + E
Sbjct: 274 FIYRPENQAKIVEEF---GFPPATKDAKSHLPKEI------QDNPII--FPSEEDINKGE 322
Query: 331 FLEPLSEA 338
F + +A
Sbjct: 323 FTNDVGKA 330
>gi|330501041|ref|YP_004377910.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915327|gb|AEB56158.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 364
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 25/219 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + +L IK + + ++ +W K L L +ND G + P
Sbjct: 75 DLVIPSNQFLETQIKAGVFAKLDKSKIPNW-KNLDPALLKLLEKNDPGNQ------YGVP 127
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y +GT++I Y K + + AP+ W +++PE + ++M++SP E+I L
Sbjct: 128 YMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALH 187
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS N V + L + F S Y+ GD+ VAVG+S
Sbjct: 188 YLGLDPNSTN-----PADYDKVTELLLKVRPYVTYFHSAKYMTDIANGDICVAVGYSGSF 242
Query: 216 LPAVKRMSNVAVVV------PKSGASLWADLWAIPAASR 248
R V PK GA +W D WAIP +++
Sbjct: 243 YQFANRAKEAGNGVTINWRLPKEGAPIWFDTWAIPKSAQ 281
>gi|119719819|ref|YP_920314.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5]
gi|119524939|gb|ABL78311.1| extracellular solute-binding protein, family 1 [Thermofilum pendens
Hrk 5]
Length = 360
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 47/263 (17%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D++ + D ++ A+KK L+ + D+ L + +V+ N DP G +A P
Sbjct: 84 DVIVLTDQYVPQAVKKGLVAQL----DKTRIPNLGNVDRVFFENN----FDP-GLRYAVP 134
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKD--LWRPELAGRISMVNSPREVIGSVLKYMGAS 160
Y WGT I + + + E D ++ P G++SM+ EV+ + Y+G
Sbjct: 135 YAWGTTGIGVNRDYVAEGEIEGYEQLFDTKVFLPRHKGKVSMLEEFLEVVNAAKLYLGIP 194
Query: 161 YNSNNIDLQVAGGKISVQQNLALLANQ----ARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
N + + S Q+ + LL Q A + ++ Y+ A GD+ A WS DV+
Sbjct: 195 LNDWSEE--------SKQRIIELLREQRDFLAGYYGASVYIPALAKGDLHAAHAWSGDVV 246
Query: 217 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQT 275
A +V V+PK GA +W D IP +R SP L ++WI F L
Sbjct: 247 QAQSENKSVEYVLPKEGAFVWIDFMVIPVNAR-------------SPDLAYEWINFLLDP 293
Query: 276 ARAL----------PFKQEVIPG 288
A A P K+E++ G
Sbjct: 294 AVAAKNSSYTYYPSPVKRELLEG 316
>gi|104773746|ref|YP_618726.1| spermidine/putrescine ABC transporter substrate-binding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
gi|103422827|emb|CAI97479.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 360
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 37/259 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y +K I+ W DLW+ + G+I +V+S R+++G L MG
Sbjct: 134 YSVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMG 190
Query: 159 ASYN-SNNIDLQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N+ L+ A K+ + +N+ A++A++ +++ + + W+ V +S +
Sbjct: 191 YSMNDTNSAHLKAAKAKLDKIGKNVKAIVADELKMYMVQN--------EAWIGVTYSGEA 242
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ + S++ VVP G++LW D IP + +++I F L+
Sbjct: 243 AMMMDQDSHIHYVVPAQGSNLWFDNIVIPKTCK------------NKEAAYKFINFMLEP 290
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E I ++P+ L LP+ + + K PP + E L
Sbjct: 291 KNAAQ-NAEYIGYSTPNTAAQKL--LPKSVREDKQF--------YPPMSTVKNLEVYRDL 339
Query: 336 SEATLSDYEWLVADLQKPA 354
+ + +Y L + + A
Sbjct: 340 PSSKVQEYNDLFLEFKMYA 358
>gi|389682707|ref|ZP_10174045.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
gi|388553435|gb|EIM16690.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
Length = 364
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAMLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG NS N D + L + F+S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLDPNSQNPD-----DYKKAEAKLLAVRPYVTYFNSSKYISDLANGEIC 233
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + +A V+PK G +LW D+ AIP
Sbjct: 234 VAAGFSGDVFQAKARAAEAGKGIEIAYVIPKEGGNLWFDMLAIP 277
>gi|425902196|ref|ZP_18878787.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397881644|gb|EJK98133.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 364
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAMLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG NS N D + L + F+S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLDPNSQNPD-----DYKKAEAKLLAVRPYVTYFNSSKYISDLANGEIC 233
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + +A V+PK G +LW D+ AIP
Sbjct: 234 VAAGFSGDVFQAKARAAEAGKGIEIAYVIPKEGGNLWFDMLAIP 277
>gi|254237466|ref|ZP_04930789.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
gi|126169397|gb|EAZ54908.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
Length = 365
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 144
E+ G +A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E++ + L Y+G N+++ D + A ++ L + F S+ Y+ G
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKA------EEVLTKVRPYVSYFHSSKYISDLANG 231
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGR 257
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 232 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK--------- 282
Query: 258 VRGPSPLIHQWIEFCLQTARALPFKQEV-----IPGASPSALETTLVKLPEELLKGKPSQ 312
S + +I++ L+ V IPGA P L V EE+ +
Sbjct: 283 ---ASDNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARP--LMDKSVSDSEEVYPPQAVL 337
Query: 313 DTNLIVGVPPAEIL 326
D + V PA++L
Sbjct: 338 DKLYVSAVLPAKVL 351
>gi|456354549|dbj|BAM88994.1| putrescine ABC transporter periplasmic binding protein [Agromonas
oligotrophica S58]
Length = 374
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 29/218 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +L IK R+ +P+ D+ L++ W V R DP G +AA
Sbjct: 85 DVVVPTAYFLQRQIKARIFQPL----DKSKLPNLANAWPVVTGR--LATYDP-GNQFAAN 137
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y WGT I Y K L P I+ W +++PE + + M++S ++ + L
Sbjct: 138 YMWGTTGIGYNVKAIEKI-LGPGAQIDSWDIVFKPENLAKFKDCGVHMLDSADDIFPAAL 196
Query: 155 KYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
++G NS DL+ A + +A R F S+ YL A G++ + VGWS
Sbjct: 197 NFLGLDPNSTRQADLENAADVV------GKVAPSVRKFHSSEYLNALATGEICLVVGWSG 250
Query: 214 DVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
D++ A R + +PK GA ++ D AIPA
Sbjct: 251 DIMQARSRAEEAKNGVEIGYAIPKQGAQMFFDNLAIPA 288
>gi|257421774|ref|ZP_05598764.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98]
gi|422707167|ref|ZP_16764864.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0043]
gi|257163598|gb|EEU93558.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98]
gi|315155525|gb|EFT99541.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0043]
Length = 357
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L++A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRLATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|227112035|ref|ZP_03825691.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|253688079|ref|YP_003017269.1| family 1 extracellular solute-binding protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754657|gb|ACT12733.1| extracellular solute-binding protein family 1 [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 369
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPENK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y G NS G + +L L L R F S+ Y+ GD
Sbjct: 182 PEEIFATVLNYQGKDPNSTK-----PGDYTTSATDLLLKLRPSIRYFHSSQYINDLANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VAVGW+ D+L A R N+ +PK GA + D+ AIP ++
Sbjct: 237 ICVAVGWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|146305384|ref|YP_001185849.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|421505532|ref|ZP_15952470.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|145573585|gb|ABP83117.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
gi|400343941|gb|EJO92313.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 365
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 92 IDPR--GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
+DP G ++ PY WGT+ I Y K + + AP++ W +++PE + +S
Sbjct: 116 LDPSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGDDAPVDSWDLVFKPENMEKLKSCGVSF 175
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFG 201
++SP E++ + L Y+G + +S+ D ++ + L L + F S+ Y+
Sbjct: 176 LDSPTEILPAALHYLGYAPDSSKAD------ELKKAEELFLSIRPSVAYFHSSKYISDLA 229
Query: 202 IGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQI 254
G++ VA+G+S D+ + R NV +PK GA + D+ A+PA A +E +
Sbjct: 230 NGNICVAIGYSGDIYQSKARAEEAKNGVNVGYNIPKEGAGSFFDMLAVPADAKNVEAAHV 289
Query: 255 G-GRVRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 292
+ P+ + I +++F A A P E + PG P+
Sbjct: 290 FLNYLMEPAVMANITNYVQFPNGNAAATPLVDEALRTDPGVYPT 333
>gi|421497340|ref|ZP_15944512.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas media
WS]
gi|407183686|gb|EKE57571.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas media
WS]
Length = 361
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVN 144
++DP G +A PY WGT I Y K + + I+ W ++ PE ++S ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWATIFEPENMKKLSHCGVAFLD 173
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E+I + L Y+G + NS++ DL+ A ++ L + F S+ Y+ G
Sbjct: 174 SADEMIPAALNYLGLNPNSHDPADLKRA------EEQLLKVRPYVTYFHSSKYIGDLANG 227
Query: 204 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
D+ VA G+S D+L A R +A +PK G +LW D+ AIP+
Sbjct: 228 DICVAAGFSGDILQAAARADEAGKGIKIAYSIPKEGGNLWFDMMAIPS 275
>gi|422734632|ref|ZP_16790920.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1341]
gi|315168636|gb|EFU12653.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1341]
Length = 357
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D IP ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVIPKTAK 273
>gi|312960500|ref|ZP_07775007.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
gi|311285234|gb|EFQ63808.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
Length = 362
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLALLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLA 185
+ P+ + ++ ++S E+ ++L YMG S + D Q A K L L
Sbjct: 157 FEPQNIKKLNQCGVAFLDSADELFPAILNYMGKDPRSEDPKDYQEAEAK------LLTLR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
F S+ Y+ G++ VA G+S DV A R N+A +PK G++LW D
Sbjct: 211 PYITYFHSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|333394556|ref|ZP_08476375.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis KCTC 3167]
gi|420145444|ref|ZP_14652910.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398402939|gb|EJN56224.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 357
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ + ++ PY WGT+ I Y N + I+ W DLW P+L I +V+S R+++G
Sbjct: 126 FDPQNR-YSVPYFWGTLGIIYNDQMI---NGSQIQHWNDLWSPKLRNNIMLVDSARDIMG 181
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVWVA 208
L G S N+ NI +L+ A K+ + N+ A++A++ +++ + + + VA
Sbjct: 182 MALISQGHSVNTTNIAELEQAKLKLEGLMPNVKAVVADEIKMYMAQN--------EAAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V WS + + S++ VVP G++LW D IP ++
Sbjct: 234 VTWSGEAAEMMANNSHLHYVVPTEGSNLWFDNLVIPKTAK 273
>gi|403058135|ref|YP_006646352.1| Putrescine-binding periplasmic protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402805461|gb|AFR03099.1| Putrescine-binding periplasmic protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 369
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPENK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y G NS G + +L L L R F S+ Y+ GD
Sbjct: 182 PEEIFATVLNYQGKDPNSTK-----PGDYTTSATDLLLKLRPSIRYFHSSQYINDLANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VAVGW+ D+L A R N+ +PK GA + D+ AIP ++
Sbjct: 237 ICVAVGWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|126698611|ref|YP_001087508.1| ABC transporter spermidine/putrescine solute-binding protein
[Clostridium difficile 630]
gi|255100064|ref|ZP_05329041.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-63q42]
gi|115250048|emb|CAJ67868.1| ABC-type transport system,spermidine/putrescine solute-binding
protein [Clostridium difficile 630]
Length = 350
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 47/320 (14%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK+ S Y DLV D + + L+E + FK + + YL ++
Sbjct: 71 YQKVKSGSTHY---DLVFPSDYMVEKMKNEGLLEKLD-------FKNIPNM--KYLDKSF 118
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ + ++ Y WGT+ I Y K + + P++ W LW P+ G I M +S R+
Sbjct: 119 LNPVYDKTNEYSVAYMWGTLGILYNKKEVKD----PMDSWNILWNPKYKGNIMMFDSVRD 174
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
IG LK +G S NS N ++ A + Q++L L D + G G+V +
Sbjct: 175 TIGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAM 228
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
+ +S D + +++ ++ +PK G + W D +P ++ + +
Sbjct: 229 GMLYSGDAVTLMEQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEA------------EL 276
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
+I F L A E I ++P+ T +KL + + P V P E+L
Sbjct: 277 FINFLLDPENA-KVNAEYIGYSTPN---TGALKLLDPEITQNP-------VAYPSKEVLD 325
Query: 328 RCEFLEPLSEAT-LSDYEWL 346
+CE E + E L D W+
Sbjct: 326 KCETFEDIGENIKLYDKAWI 345
>gi|83645024|ref|YP_433459.1| spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
gi|83633067|gb|ABC29034.1| Spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
Length = 349
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 44/252 (17%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP + ++ PY WG+ I + I WKDLW P+ G + + + REV
Sbjct: 121 DPDNQ-YSIPYTWGSTGIGINAEAIDPKS---ITSWKDLWNPKWKGSLLLTDDVREVFHM 176
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAV 209
LK G S NS + ++Q LL +++S + + GDV + +
Sbjct: 177 ALKINGHSGNSTD--------PAEIKQAYELLKTLTPNVLVYNSDAPREPYMAGDVNLGM 228
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWI 269
W+ +V+ A + ++ + PK GA+ W D +AIPA + + + ++I
Sbjct: 229 IWNGEVIQAQQENPDIQYIYPKEGAAFWVDSFAIPAGAENKENAL------------KFI 276
Query: 270 EFCLQ---TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 326
+F LQ R + F P + SAL+ L +E L+ P+ PPAE++
Sbjct: 277 DFMLQPEIAKRCVEFIGYATP--NKSALD-----LLDEKLRNNPTI-------FPPAEVI 322
Query: 327 ARCEFLEPLSEA 338
+ +F + + EA
Sbjct: 323 QKGDFQQDVGEA 334
>gi|388468131|ref|ZP_10142341.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas synxantha BG33R]
gi|388011711|gb|EIK72898.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas synxantha BG33R]
Length = 364
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K ++ + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS N D + A ++ L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLDPNSTNPADYKKA------EEKLLKVRPYVTYFHSSKYISDLANGNI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 233 CVAAGFSGDVFQAKARAAEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|255305953|ref|ZP_05350125.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile ATCC 43255]
gi|423090206|ref|ZP_17078514.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 70-100-2010]
gi|357556881|gb|EHJ38452.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 70-100-2010]
Length = 350
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 47/320 (14%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK+ S Y DLV D + + L+E + FK + + YL ++
Sbjct: 71 YQKVKSGSTHY---DLVFPSDYMVEKMKNEGLLEKLD-------FKNIPNM--KYLDKSF 118
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ + ++ Y WGT+ I Y K + + P++ W LW P+ G I M +S R+
Sbjct: 119 LNPVYDKTNEYSVAYMWGTLGILYNKKEVKD----PMDSWNILWNPKYKGNIMMFDSVRD 174
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
IG LK +G S NS N ++ A + Q++L L D + G G+V +
Sbjct: 175 TIGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAM 228
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
+ +S D + +++ ++ +PK G + W D +P ++ + +
Sbjct: 229 GMLYSGDAVTLMEQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEA------------EL 276
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
+I F L A E I ++P+ T +KL + + P V P E+L
Sbjct: 277 FINFLLDPENA-KVNAEYIGYSTPN---TGALKLLDPEITQNP-------VAYPSKEVLD 325
Query: 328 RCEFLEPLSEAT-LSDYEWL 346
+CE E + E L D W+
Sbjct: 326 KCETFEDIGENIKLYDKAWI 345
>gi|254974578|ref|ZP_05271050.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-66c26]
gi|255091968|ref|ZP_05321446.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile CIP 107932]
gi|255313703|ref|ZP_05355286.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-76w55]
gi|255516385|ref|ZP_05384061.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-97b34]
gi|255649485|ref|ZP_05396387.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-37x79]
gi|260682651|ref|YP_003213936.1| spermidine/putrescine ABC transporter substrate-binding protein
[Clostridium difficile CD196]
gi|260686251|ref|YP_003217384.1| spermidine/putrescine ABC transporter substrate-binding protein
[Clostridium difficile R20291]
gi|306519559|ref|ZP_07405906.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
difficile QCD-32g58]
gi|384360232|ref|YP_006198084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
difficile BI1]
gi|260208814|emb|CBA61720.1| spermidine/putrescine ABC transporter, substrate-binding
lipoprotein [Clostridium difficile CD196]
gi|260212267|emb|CBE03005.1| spermidine/putrescine ABC transporter, substrate-binding
lipoprotein [Clostridium difficile R20291]
Length = 350
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 47/320 (14%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK+ S Y DLV D + + L+E + FK + + YL ++
Sbjct: 71 YQKVKSGSTHY---DLVFPSDYMVEKMKNEGLLEKLD-------FKNIPNM--KYLDKSF 118
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ + ++ Y WGT+ I Y K + + P++ W LW P+ G I M +S R+
Sbjct: 119 LNPVYDKTNEYSVAYMWGTLGILYNKKEVKD----PMDSWNILWNPKYKGNIMMFDSVRD 174
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
IG LK +G S NS N ++ A + Q++L L D + G G+V +
Sbjct: 175 TIGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAM 228
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
+ +S D + +++ ++ +PK G + W D +P ++ + +
Sbjct: 229 GMLYSGDAVTLMEQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEA------------EL 276
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
+I F L A E I ++P+ T +KL + + P V P E+L
Sbjct: 277 FINFLLDPENA-KVNAEYIGYSTPN---TGALKLLDPEITQNP-------VAYPSKEVLD 325
Query: 328 RCEFLEPLSEAT-LSDYEWL 346
+CE E + E L D W+
Sbjct: 326 KCETFEDIGENIKLYDKAWI 345
>gi|399008538|ref|ZP_10711009.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398116267|gb|EJM06035.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 355
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 111 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAMLFEPENIKKLSSCGVAFLDSA 169
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG NS N D + L + F+S+ Y+ G++
Sbjct: 170 DEMLPAVLNYMGLDPNSQNPD-----DYKKAEAKLLAVRPYVTYFNSSKYISDLANGEIC 224
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + +A V+PK G +LW D+ AIP
Sbjct: 225 VAAGFSGDVFQAKARAAEAGKGIEIAYVIPKEGGNLWFDMLAIP 268
>gi|384513985|ref|YP_005709078.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
OG1RF]
gi|430358128|ref|ZP_19425232.1| ABC spermidine/putrescine transporter [Enterococcus faecalis OG1X]
gi|430366431|ref|ZP_19427499.1| ABC spermidine/putrescine transporter [Enterococcus faecalis M7]
gi|327535874|gb|AEA94708.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
OG1RF]
gi|429513934|gb|ELA03508.1| ABC spermidine/putrescine transporter [Enterococcus faecalis OG1X]
gi|429517073|gb|ELA06542.1| ABC spermidine/putrescine transporter [Enterococcus faecalis M7]
Length = 357
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L++A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRLATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|24372851|ref|NP_716893.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
gi|24346959|gb|AAN54338.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
Length = 367
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 51/301 (16%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ IK +P+ ++ + FK L+ L + D G +A P
Sbjct: 77 DIVVPSNHFLAKQIKAGAFKPLDRSKLTN-FKNLNADLMKLLEKADPG------NQYAVP 129
Query: 103 YRWGTMVIAYKKSKFRK---HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVL 154
Y WGT I Y +K + + P + ++ P+ A +IS M++S +++ +
Sbjct: 130 YLWGTNGIGYNINKVKAAVGEDAPPFNSMELIFNPKYAEKISKCGFAMLDSADDMVPQAM 189
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS + G++ L + F S+ Y+ GD+ VA G+S D
Sbjct: 190 IYLGLDPNSTKAEDYEKAGEL-----LEKIRPYVTYFHSSRYISDLANGDICVAYGFSGD 244
Query: 215 VLPAVKRM------SNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQ 267
V A R + + +PK GA+LW D+ AIPA A+ +E H+
Sbjct: 245 VFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADATNVENA-------------HK 291
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
I + L+ P V A+P+ L LV +E ++ P+ PP E+L
Sbjct: 292 LINYLLRPEVIAPISNYV-AYANPNDLAQPLV---DEAIRNDPAI-------YPPKEVLD 340
Query: 328 R 328
+
Sbjct: 341 K 341
>gi|146341580|ref|YP_001206628.1| putrescine ABC transporter substrate-binding protein
[Bradyrhizobium sp. ORS 278]
gi|146194386|emb|CAL78411.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 278]
Length = 366
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +L IK ++ +P+ D+ L++ W V R DP G +AA
Sbjct: 77 DVVVPTAYFLQRQIKAKIFQPL----DKAKLPNLANAWTVVTAR--LATYDP-GNQFAAN 129
Query: 103 YRWGTMVIAYKKSKFRKHNLAP--IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT I Y K A I+ W +++PE R + M++S ++ + L
Sbjct: 130 YMWGTTGIGYNVKAIEKILGAGVRIDSWDMVFKPENLARFKDCGVHMLDSADDIFPAALN 189
Query: 156 YMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS DL+ A + + +A R F S+ YL A G++ + VGWS D
Sbjct: 190 YLGLDPNSTKQADLEKAA------EVVGKVAPFVRKFHSSEYLSALATGEICLVVGWSGD 243
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
++ A R + +PK GA ++ D +AIPA ++
Sbjct: 244 IMQARSRAEEAKNGIEIGYAIPKEGAQMFFDNFAIPADAQ 283
>gi|440757617|ref|ZP_20936800.1| Putrescine ABC transporter putrescine-binding protein PotF [Pantoea
agglomerans 299R]
gi|436428606|gb|ELP26260.1| Putrescine ABC transporter putrescine-binding protein PotF [Pantoea
agglomerans 299R]
Length = 369
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS++ + +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAK-EYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GWS D+L A R ++ VPK GA + D+ AIP ++
Sbjct: 238 CVAIGWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|381405138|ref|ZP_09929822.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. Sc1]
gi|380738337|gb|EIB99400.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. Sc1]
Length = 369
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGTDAPLNSWDLVMKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS++ +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAK-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGG 256
VA+GWS D+L A R ++ VPK GA + D+ AIP + K I G
Sbjct: 238 CVAIGWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPK----DAKNIDG 290
>gi|418021465|ref|ZP_12660549.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
gi|347603175|gb|EGY28056.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
Length = 379
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP + +A PY W T I Y K ++ + AP W + + E + +S +++
Sbjct: 133 DPDNQ-FAIPYLWNTTGIGYNVEKIKQALGDDAPTNSWDLVLKAENLAKLKNCGVSFLDA 191
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGD 204
P E+ ++L Y+G NS Q+A S + L L R F S+ Y+ GD
Sbjct: 192 PSEIFATLLHYLGKDANS-----QLASDYTGSATELLLTLRPSIRYFHSSQYINDLANGD 246
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VAVGW+ D++ A R N+A +PK GA + D++A+PA ++
Sbjct: 247 ICVAVGWNGDIVQAANRAKEAKNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|319787664|ref|YP_004147139.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317466176|gb|ADV27908.1| extracellular solute-binding protein family 1 [Pseudoxanthomonas
suwonensis 11-1]
Length = 375
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSK----FRKHNLAPIEDWKDLWRPELAGRIS-----MV 143
DP G ++ PY WGT + Y K F +A W L++PE R++ ++
Sbjct: 130 DP-GNQYSIPYLWGTTGLGYNVDKVTEAFGGTEVA--NSWDLLFKPENVSRLAHCGVMIL 186
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
++P E I + L Y+G NS + ++ G + LA + R F S+ Y+ A G
Sbjct: 187 DTPTEAIPAALNYLGEDPNSTDPEVIRKGAAL-----LAKIRPHIRSFHSSQYIDALANG 241
Query: 204 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
+ +GWS DVL A R VA +PK GA L+ D+ AIP +R
Sbjct: 242 SACLVMGWSGDVLQARDRADEAGNGVKVAYSIPKEGAPLFVDMLAIPKDAR 292
>gi|407368003|ref|ZP_11114535.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 355
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPE-----LAGRISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W ++ P+ A ++ ++S
Sbjct: 111 DP-GNLYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWSAVFEPQNIKKLHACGVAFLDSA 169
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 170 DEMMPTVLNYMGLNANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 223
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
+A+G+S D+ A R N+A +PK G +LW D+ AIP
Sbjct: 224 CIAIGFSGDMFQAKARAEEAGKGMNIAYSIPKEGGALWFDMLAIP 268
>gi|398871854|ref|ZP_10627162.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398204929|gb|EJM91722.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 365
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 39/286 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + + + ++ +W K L+ V L+ +A DP A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQELDKSKLSNW-KNLN---PVLLK--NASASDPENA-HAIP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + +K ++ AP W L++PE A + IS ++SP E+I + L
Sbjct: 129 YMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPTALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G N N K + + AL F S+ Y+ G++ VAVG+S
Sbjct: 189 YLGYPVNDQN--------KQHIAEAQALFMRIRPNVAYFHSSKYISDLANGNICVAVGYS 240
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP-AASRLETKQIGGR-VRGPSPL 264
DVL A R + +PK GA+ + D+ AIP A+ +E + + + P +
Sbjct: 241 GDVLQAKARAQEAGDKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMKFLMRPDVI 300
Query: 265 --IHQWIEFCLQTARALPFKQEVI---PGA-SPSALETTLVKLPEE 304
I I + A A P E I PG+ P A+ TL +P++
Sbjct: 301 ADITNNIGYSNANAAATPLVDEAIRNDPGSYPPEAVMATLYAVPDQ 346
>gi|313889474|ref|ZP_07823122.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus pseudoporcinus SPIN 20026]
gi|416851513|ref|ZP_11908658.1| ABC transporter, solute-binding protein [Streptococcus
pseudoporcinus LQ 940-04]
gi|313122306|gb|EFR45397.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus pseudoporcinus SPIN 20026]
gi|356739002|gb|EHI64234.1| ABC transporter, solute-binding protein [Streptococcus
pseudoporcinus LQ 940-04]
Length = 357
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ ++ PY WGT+ I Y + KH AP + WKDLWRPE +I +V+ RE++G
Sbjct: 127 FDPKND-YSIPYFWGTVGIVYNDQQV-KH--AP-KHWKDLWRPEYKDKIMLVDGAREMLG 181
Query: 152 SVLKYMGASYNSNNID-LQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L G S NS N+D L+ A ++ ++ N+ A++A++ +K + I GD +
Sbjct: 182 VGLTTFGNSVNSKNMDQLKAAEKRLQTLTSNIKAIVADE---------MKGYMIQGDAAI 232
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 250
V +S + + ++ VVP G++LW D +P + E
Sbjct: 233 GVTFSGEASEMLANNKHLHYVVPTEGSNLWFDNLVLPKTMKHE 275
>gi|337267065|ref|YP_004611120.1| family 1 extracellular solute-binding protein [Mesorhizobium
opportunistum WSM2075]
gi|336027375|gb|AEH87026.1| extracellular solute-binding protein family 1 [Mesorhizobium
opportunistum WSM2075]
Length = 365
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRP 134
+S+ W R + DP G ++ Y WGT+ I Y K + I+ W + P
Sbjct: 106 ISNMWDTVSER--TAKYDP-GNEYSVNYMWGTVGIGYNIKKVQAALGTDKIDSWDTFFNP 162
Query: 135 ELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR 189
+ + + +++SP ++I + LKY+G NS + D +A + ++ + + R
Sbjct: 163 DSLAKLKDCGVYVLDSPADIIPAALKYLGLDPNSTSPD-DIAKAEDALMKVRPFI----R 217
Query: 190 LFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAI 243
F S+ Y+ A GD+ +AVGWS DV A K+ + VPK GA +W D AI
Sbjct: 218 KFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQMAI 277
Query: 244 PA 245
PA
Sbjct: 278 PA 279
>gi|419955798|ref|ZP_14471920.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967394|gb|EIK51697.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 365
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 34/224 (15%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPE-----LAGRISMVNS 145
DP G +A PY WGT+ I Y K + + AP++ W +++PE A +S ++S
Sbjct: 120 DP-GNQYAIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKACGVSFLDS 178
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E++ + L Y+G + +S+ ++ + L L + F S+ Y+ G+
Sbjct: 179 PTEILPAALHYLGYAPDSDKT------AELKKAEELFLQIRPHVAYFHSSKYISDLANGN 232
Query: 205 VWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLETKQI--- 254
V VA+G+S D+ A R V +PK GA + D+ AIPA A ++ +
Sbjct: 233 VCVAIGYSGDIYQAKARAEEAKNGVKVGYKIPKEGAGSFFDMVAIPADAKNVDNAHVFIN 292
Query: 255 ---GGRVRGPSPLIHQWIEFCLQTARALPFKQEVI---PGASPS 292
V P I +++F A A P E I PG PS
Sbjct: 293 YLLKPEVMAP---IVNYVQFPSANAAATPLVDEAIRTDPGIYPS 333
>gi|372269532|ref|ZP_09505580.1| transcription factor jumonji, jmjC [Marinobacterium stanieri S30]
Length = 363
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 102 PYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
PY WG+ I Y K R+ + P + W+ L+ PE+ + +++++ P EV+ +
Sbjct: 126 PYMWGSSGIGYNVEKVREVLGDDMPKDTWRLLFDPEIVAKLASCGVTLMDDPTEVLVAAN 185
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y GA N D G + +A + R F S+ Y+ GD+ VA G+S D
Sbjct: 186 IYRGA-----NADDFSKAGIAGASETVAAVRPHIRYFHSSQYINDLANGDICVAHGYSGD 240
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 245
VL A R + +A VP GA +W D+ AIPA
Sbjct: 241 VLQARDRAAEAGNGVEIAYAVPSEGALVWTDVMAIPA 277
>gi|323142870|ref|ZP_08077582.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
gi|322417412|gb|EFY08034.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
Length = 377
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 33/208 (15%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMV 143
IDP +A PY ++ IAY K + P ++ W L++ E + + I+++
Sbjct: 119 IDPNND-YAYPYTEISLGIAYNDKKIAEI-FGPDFKVDSWDFLFKKENSDKLKQCGIAVL 176
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
+SP EVI + + Y+G NS + A ++ L LA+ R F S+ Y+ G
Sbjct: 177 DSPIEVISAAMHYLGKDPNS-----EKASDYEEAEKLLTALASNVRYFHSSRYINELASG 231
Query: 204 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGR 257
++ A+G+S D+L A KR + V PK G+ LW D W IPA +
Sbjct: 232 EICAAIGYSGDILQADKRAIQANRDYRIKYVFPKEGSLLWFDCWTIPAGAE--------N 283
Query: 258 VRGPSPLIHQWIEFCLQTARALPFKQEV 285
+G H W + L A E+
Sbjct: 284 YKGA----HAWFNYLLDPQVAKSVSNEI 307
>gi|418853425|ref|ZP_13408114.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392826686|gb|EJA82407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
Length = 370
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCDVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+ NS+ D G + L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLDKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|320158082|ref|YP_004190460.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
gi|319933394|gb|ADV88257.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
Length = 344
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 37/254 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP ++ PY WG I+Y +S AP+ W DLW + A ++ +++ R+V G
Sbjct: 117 DPNND-YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
LK G S N+ N D ++ ++L L N L++S + G+ V + W+
Sbjct: 172 ALKLNGYSINTKNED-EIK----KAYESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWN 226
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFC 272
+ M + V+P+ GA +W D + IP+ S+ + L H++I F
Sbjct: 227 GNAYQGQVEMPELKFVMPEEGAVMWMDNFTIPSGSKHKE------------LAHKFINFM 274
Query: 273 LQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEI-LARCE 330
Q + E++ SA LP+E LK P+ + PA+ + + E
Sbjct: 275 YQPEH----QAEIVNSLGYASATNAGRALLPDE-LKNNPT--------IFPADADVKKGE 321
Query: 331 FLEPLSEATLSDYE 344
F+ + L+ YE
Sbjct: 322 FINDVGPEALAIYE 335
>gi|402770567|ref|YP_006590104.1| extracellular solute-binding protein family 1 [Methylocystis sp.
SC2]
gi|401772587|emb|CCJ05453.1| Extracellular solute-binding protein family 1 [Methylocystis sp.
SC2]
Length = 361
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPR------G 96
D+V+ ++L I +++PI + K+ RN EID R G
Sbjct: 74 DVVAPSATFLQRQIAAGVLQPI-------------DRSKLVNARNIWPEIDSRLSRFDPG 120
Query: 97 KIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIG 151
+A Y W T +AY +K ++ PI W + RPE +++ M++SP ++
Sbjct: 121 NRYAINYMWYTTGVAYDVAKVQERLGKPITSWDQVLRPENLKKLADCGVYMLDSPEDMFA 180
Query: 152 SVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
L Y+ NS N DL A G L L + F S+ Y+ A GD+ VA+G
Sbjct: 181 IALNYLKLDPNSKNPKDLARAAGL------LGSLRRYVKKFHSSEYINALANGDICVAIG 234
Query: 211 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
WS D L A R ++A V+P G+ L D AIP +R
Sbjct: 235 WSGDSLQARNRAREAGTDVDIAYVIPTEGSLLSLDNLAIPEDAR 278
>gi|395649101|ref|ZP_10436951.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 364
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENMKKLASCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPEDYKKAEAK------LLKVRPYVTYFHSSKYISDLANGNI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S DV A R S N+A +PK G +LW D+ AIP
Sbjct: 233 CVAAGFSGDVFQAKARASEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|423081922|ref|ZP_17070517.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 002-P50-2011]
gi|423085526|ref|ZP_17073968.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 050-P50-2011]
gi|357549172|gb|EHJ31019.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 002-P50-2011]
gi|357549443|gb|EHJ31289.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 050-P50-2011]
Length = 350
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 47/320 (14%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ KVK+ S Y DLV D + + L+E + FK + + YL ++
Sbjct: 71 YQKVKSGSTHY---DLVFPSDYMVEKMKNEGLLEKLD-------FKNIPNM--KYLDKSF 118
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
+ + ++ Y WGT+ I Y K + + P++ W LW P+ G I M +S R+
Sbjct: 119 LNPVYDKTNEYSVAYMWGTLGILYNKKEVKD----PMDSWDILWNPKYKGNIMMFDSVRD 174
Query: 149 VIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWV 207
IG LK +G S NS N ++ A + Q++L L D + G G+V +
Sbjct: 175 TIGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAM 228
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
+ +S D + +++ ++ +PK G + W D +P ++ + +
Sbjct: 229 GMLYSGDAVTLMEQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEA------------EL 276
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
+I F L A E I ++P+ T +KL + + P V P E+L
Sbjct: 277 FINFLLDPENA-KVNAEYIGYSTPN---TGALKLLDPEITQNP-------VAYPSKEVLD 325
Query: 328 RCEFLEPLSEAT-LSDYEWL 346
+CE E + E L D W+
Sbjct: 326 KCETFEDIGENIKLYDKAWI 345
>gi|15595498|ref|NP_248992.1| polyamine transporter [Pseudomonas aeruginosa PAO1]
gi|107099282|ref|ZP_01363200.1| hypothetical protein PaerPA_01000294 [Pseudomonas aeruginosa PACS2]
gi|116054027|ref|YP_788470.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889041|ref|YP_002437905.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|254243398|ref|ZP_04936720.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|296386794|ref|ZP_06876293.1| polyamine transport protein [Pseudomonas aeruginosa PAb1]
gi|313112088|ref|ZP_07797872.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|355646504|ref|ZP_09054459.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|386063282|ref|YP_005978586.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|416878351|ref|ZP_11920375.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|418584347|ref|ZP_13148409.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418591159|ref|ZP_13155060.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420136865|ref|ZP_14644878.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|421157298|ref|ZP_15616680.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|421172021|ref|ZP_15629801.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|421178211|ref|ZP_15635826.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|421514913|ref|ZP_15961599.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|424943286|ref|ZP_18359049.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|451984064|ref|ZP_21932323.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
gi|9946146|gb|AAG03690.1|AE004468_2 polyamine transport protein [Pseudomonas aeruginosa PAO1]
gi|115589248|gb|ABJ15263.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196776|gb|EAZ60839.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|218769264|emb|CAW25024.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|310884374|gb|EFQ42968.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|334838401|gb|EGM17123.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|346059732|dbj|GAA19615.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|348031841|dbj|BAK87201.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828463|gb|EHF12583.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|375045845|gb|EHS38418.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050052|gb|EHS42538.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|403250363|gb|EJY63806.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|404348641|gb|EJZ74978.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|404538248|gb|EKA47791.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|404548541|gb|EKA57488.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|404550731|gb|EKA59455.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|451758300|emb|CCQ84846.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
Length = 365
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 38/254 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 144
E+ G +A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E++ + L Y+G N+++ D + A ++ L + F S+ Y+ G
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKA------EEVLTKVRPYVSYFHSSKYISDLANG 231
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGR 257
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 232 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNA---- 287
Query: 258 VRGPSPLIHQWIEFCLQTARALPFKQEV-----IPGASPSALETTLVKLPEELLKGKPSQ 312
+ +I++ L+ V IPGA P L V EE+ +
Sbjct: 288 --------YAFIDYLLRPEVIAKVSDYVGYANAIPGARP--LMDKSVSDSEEVYPPQAVL 337
Query: 313 DTNLIVGVPPAEIL 326
D + V PA++L
Sbjct: 338 DKLYVSAVLPAKVL 351
>gi|145640471|ref|ZP_01796055.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae R3021]
gi|145275057|gb|EDK14919.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae 22.4-21]
Length = 350
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV ++S IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVSKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP +++ V G H++I+F L+ A
Sbjct: 243 NPSLQFVYPKEGAIFWMDNYAIPNSAQ--------NVEG----AHKFIDFLLRPENA 287
>gi|393765753|ref|ZP_10354314.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
gi|392728989|gb|EIZ86293.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
Length = 394
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 21/166 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A Y WGT I Y + R+ A + W + P A + I M++S
Sbjct: 149 DP-GNTYAVDYMWGTTGIGYNVAAVRERLGANAALNSWTVVLNPASANKLKDCGIMMLDS 207
Query: 146 PREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
P ++I S+L GA +S DL + V L + R F ++ Y++A GD
Sbjct: 208 PEDLIPSMLPVFGAKADSKRWDDLTL------VTDALYKVRGSVRKFHASEYIQALANGD 261
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
+ VAVG+S DV+ A +R +A VVPK GA +W D +AIP
Sbjct: 262 ICVAVGYSGDVMQAKRRAEEAKNGIEIAYVVPKEGALMWFDTFAIP 307
>gi|76787391|ref|YP_329814.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae A909]
gi|406709561|ref|YP_006764287.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus agalactiae GD201008-001]
gi|424049369|ref|ZP_17786920.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
ZQ0910]
gi|76562448|gb|ABA45032.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae A909]
gi|389649040|gb|EIM70525.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
ZQ0910]
gi|406650446|gb|AFS45847.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae GD201008-001]
Length = 357
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKYWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G N+ NI +L+ A K+ ++ N+ A++A++ +K + I GD +
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADE---------MKGYMIQGDAAI 232
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + + ++ VVP G++LW D IP +
Sbjct: 233 GVTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|27367812|ref|NP_763339.1| ABC transporter periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
gi|27359385|gb|AAO08329.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
Length = 360
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 37/254 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP ++ PY WG I+Y +S AP+ W DLW + A ++ +++ R+V G
Sbjct: 133 DPNND-YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGM 187
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
LK G S N+ N D ++ ++L L N L++S + G+ V + W+
Sbjct: 188 ALKLNGYSINTKNED-EIK----KAYESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWN 242
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFC 272
+ M + V+P+ GA +W D + IP+ S+ + L H++I F
Sbjct: 243 GNAYQGQVEMPELKFVMPEEGAVMWMDNFTIPSGSKHKE------------LAHKFINFM 290
Query: 273 LQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEI-LARCE 330
Q + E++ SA LP+E LK P+ + PA+ + + E
Sbjct: 291 YQPEH----QAEIVNSLGYASATNAGRALLPDE-LKNNPT--------IFPADADVKKGE 337
Query: 331 FLEPLSEATLSDYE 344
F+ + L+ YE
Sbjct: 338 FINDVGPEALAIYE 351
>gi|422300669|ref|ZP_16388180.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
gi|407987082|gb|EKG29964.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
Length = 364
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ ++L Y+G S NS N D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAMLNYLGLSPNSTNEADYKKAEAK------LLAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|335035434|ref|ZP_08528775.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
gi|333793201|gb|EGL64557.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
Length = 365
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V+ +L+ IK + + + D+ L + W R + DP G +A
Sbjct: 77 DVVAPTSPFLARQIKAGVYQKL----DKSKLPNLKNAWPEITER--LAKYDP-GNEYAVN 129
Query: 103 YRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y +K + P++ W L++PE A + I+++++ E + Y
Sbjct: 130 YMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINVLDASDETFAIAMNY 189
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
+G + +S AGG++ + + + F+S+ Y+ GD +++GWS D+L
Sbjct: 190 LGKNPDSKETADLEAGGEV-----YSKIRPYVKTFNSSPYINDLANGDTCISIGWSGDIL 244
Query: 217 PAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R V V+PK G +W D +AIPA ++
Sbjct: 245 QAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAK 282
>gi|145630323|ref|ZP_01786104.1| ribokinase [Haemophilus influenzae R3021]
gi|144984058|gb|EDJ91495.1| ribokinase [Haemophilus influenzae R3021]
Length = 350
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|148827692|ref|YP_001292445.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittGG]
gi|148718934|gb|ABR00062.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittGG]
Length = 350
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|325845729|ref|ZP_08169009.1| putative spermidine/putrescine ABC transporter [Turicibacter sp.
HGF1]
gi|325488243|gb|EGC90672.1| putative spermidine/putrescine ABC transporter [Turicibacter sp.
HGF1]
Length = 348
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 38/288 (13%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ K+KA Y D+ D + IK+ L+ P+ ++ + F+ +S +K
Sbjct: 64 YQKIKAGGTNY---DVAFPSDYMVEKMIKENLVLPLDYSKIPN-FEYISDAYK------- 112
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
DP ++ PY WGT+ I Y K+ ++ P++ W LW + G I M +S R+
Sbjct: 113 NLPYDP-DNLYTVPYFWGTVGILYDKTVVKE----PVDSWSILWDEDYKGNIFMYDSQRD 167
Query: 149 VIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
+ LK +G S NS ++D ++ + Q + A + + + G+ +A
Sbjct: 168 SLMVALKLLGYSMNSQDLDQLEEAKQLLIDQRPLVYA-----YVTDQVIDNMIAGNAALA 222
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
V +S D + N+ V+PK G++ W D IP+ ++ L H++
Sbjct: 223 VVYSGDATYIMDENENMEYVIPKEGSNTWVDSMVIPSTAQ------------NVDLAHEF 270
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQD 313
I F + AL E + ++P+ ET + EE + PSQD
Sbjct: 271 INFMQRPEIAL-MNTEYVMYSTPNT-ETLEMVSEEEWTQNDAYSPSQD 316
>gi|145637462|ref|ZP_01793121.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae PittHH]
gi|145269408|gb|EDK09352.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae PittHH]
Length = 350
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV ++S IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVSKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP +++ V G H++I+F L+ A
Sbjct: 243 NPSLQFVYPKEGAIFWMDNYAIPNSAQ--------NVEG----AHKFIDFLLRPENA 287
>gi|194443308|ref|YP_002040117.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194401971|gb|ACF62193.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
Length = 371
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+ NS+ D G + L L R F S+ Y+ GD
Sbjct: 184 PEEIFATVLNYLDKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|160874318|ref|YP_001553634.1| extracellular solute-binding protein [Shewanella baltica OS195]
gi|378707564|ref|YP_005272458.1| extracellular solute-binding protein [Shewanella baltica OS678]
gi|160859840|gb|ABX48374.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS195]
gi|315266553|gb|ADT93406.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS678]
Length = 366
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ IK +P+ A+ + FK L+ L + D G +A P
Sbjct: 77 DIVVPSNHFLAKQIKAGAFKPLDRAKLSN-FKNLNPALMKLLEKADPG------NQYAVP 129
Query: 103 YRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLK 155
Y WGT I Y K + AP + ++ P+ A +IS M++S +++ L
Sbjct: 130 YLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDSADDMVPQALI 189
Query: 156 YMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS+N D + AG + L + F S+ Y+ GD+ VA G+S D
Sbjct: 190 YLGLDPNSSNPSDYEKAG------ELLEKIRPYVTYFHSSRYISDLANGDICVAFGFSGD 243
Query: 215 VLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 247
V A R + + +PK GA+LW D+ AIPA S
Sbjct: 244 VFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|15887954|ref|NP_353635.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
gi|15155556|gb|AAK86420.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
Length = 365
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V+ +L+ IK + + + D+ L + W R + DP G +A
Sbjct: 77 DVVAPTSPFLARQIKAGVYQKL----DKSKLPNLKNAWPDITER--LAKYDP-GNEYAVN 129
Query: 103 YRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y +K + P++ W L++PE A + I+++++ E + Y
Sbjct: 130 YMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINILDASDETFAIAMNY 189
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
+G + +S AGG++ + + + F+S+ Y+ GD +++GWS D+L
Sbjct: 190 LGKNPDSKETADLEAGGEV-----YSKIRPYVKTFNSSPYINDLANGDTCISIGWSGDIL 244
Query: 217 PAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
A R V V+PK G +W D +AIPA ++
Sbjct: 245 QAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAK 282
>gi|421165155|ref|ZP_15623497.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
gi|404542820|gb|EKA52128.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
Length = 365
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 38/254 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 144
E+ G +A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E++ + L Y+G N+++ D + A ++ L + F S+ Y+ G
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKA------EEVLTKVRPYVSYFHSSKYISDLANG 231
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGR 257
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 232 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNA---- 287
Query: 258 VRGPSPLIHQWIEFCLQTARALPFKQEV-----IPGASPSALETTLVKLPEELLKGKPSQ 312
+ +I++ L+ V IPGA P L V EE+ +
Sbjct: 288 --------YAFIDYLLRPEVIAKVSDYVGYANAIPGARP--LMDKSVSDSEEVYPPQAVL 337
Query: 313 DTNLIVGVPPAEIL 326
D + V PA++L
Sbjct: 338 DKLYVSAVLPAKVL 351
>gi|319782139|ref|YP_004141615.1| family 1 extracellular solute-binding protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168027|gb|ADV11565.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 365
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRP 134
+S+ W R + DP G ++ Y WGT+ I Y K + I+ W + P
Sbjct: 106 ISNMWDTVSER--TAKYDP-GNEYSVNYMWGTVGIGYNIKKVQAALGTDKIDSWDVFFNP 162
Query: 135 ELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR 189
+ + + +++SP ++I + LKY+G NS + D +A ++ L + R
Sbjct: 163 DSLAKLKDCGVYVLDSPADIIPAALKYLGLDPNSTSPD-DIA----KAEETLLKVRPYIR 217
Query: 190 LFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAI 243
F S+ Y+ A GD+ +AVGWS DV A K+ + VPK GA +W D AI
Sbjct: 218 KFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQMAI 277
Query: 244 PA 245
PA
Sbjct: 278 PA 279
>gi|418808399|ref|ZP_13363954.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418812556|ref|ZP_13368079.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815809|ref|ZP_13371304.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418820021|ref|ZP_13375456.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418833304|ref|ZP_13388234.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418835228|ref|ZP_13390124.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418842143|ref|ZP_13396956.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418843135|ref|ZP_13397934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418850066|ref|ZP_13404785.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418857148|ref|ZP_13411778.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418861856|ref|ZP_13416406.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418869018|ref|ZP_13423459.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|392775976|gb|EJA32666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392776587|gb|EJA33274.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392791176|gb|EJA47666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392793037|gb|EJA49482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392795876|gb|EJA52227.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392804046|gb|EJA60223.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392807468|gb|EJA63539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392817273|gb|EJA73188.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392819272|gb|EJA75144.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392835358|gb|EJA90955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392837095|gb|EJA92666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392837708|gb|EJA93278.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 370
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + + AP+ W + +PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+ NS+ D G + L L R F S+ Y+ GD
Sbjct: 183 PEEIFATVLNYLDKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDT 238
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 239 CVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|229844342|ref|ZP_04464482.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 6P18H1]
gi|229812591|gb|EEP48280.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 6P18H1]
Length = 350
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|241203161|ref|YP_002974257.1| extracellular solute-binding protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857051|gb|ACS54718.1| extracellular solute-binding protein family 1 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 365
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 47/295 (15%)
Query: 56 IKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKS 115
+K+++ + D+ L + W V ++ DP G ++ Y WGT I Y
Sbjct: 86 MKRQIAAGVYQKLDKSKLPNLVNMWDVIMKG--VASFDP-GNEYSVDYMWGTTGIGYNVD 142
Query: 116 KFRKHNLAPIE--DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-D 167
K K L E +W L+ P A + I M++SP +V+ SVL Y+G + NS + D
Sbjct: 143 KV-KAALGTDEKPNWDALFDPAKAAKLKDCGIYMLDSPTDVVPSVLAYLGLNPNSTDAAD 201
Query: 168 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM--SNV 225
L+ A Q L + R F S+ Y+ A GD+ +A+G+S D+ A R +NV
Sbjct: 202 LKKA------QAVLTAVRPFVRKFHSSEYISALANGDICIALGYSGDMFQARDRAKEANV 255
Query: 226 AV----VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPF 281
V VP GA ++ D++ IP + + H++I + +
Sbjct: 256 GVKVDYSVPSQGAQIFFDVFGIPKDAPHVAEA------------HEFINYMM-------- 295
Query: 282 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLS 336
K EV+ AS K ++ L + DT + P E++A+ + PL
Sbjct: 296 KPEVVAKASNVVFYANGNKASQQFLDKEVLDDTAIY---PTPEVMAKLFTVPPLD 347
>gi|319897986|ref|YP_004136183.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae F3031]
gi|317433492|emb|CBY81875.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae F3031]
Length = 350
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|389684610|ref|ZP_10175938.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
gi|388551833|gb|EIM15098.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
Length = 362
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ +K + A+ +W + L K L++ND G ++ P
Sbjct: 74 DVVVPSNHFLARQVKAGAFLKLDRAQLPNW-QNLDPKLLALLKQNDPGNQ------YSVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W + PE + +SM++SP EV ++L Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGVDKIDSWAVFFEPENLKKLSQCGVSMMDSPDEVFPAMLNY 186
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G S N D + A K L + F S+ Y+ G++ +A G+S DV
Sbjct: 187 LGLDPRSENPADYKKAEAK------LLAIRPYITYFHSSKYVSDLANGNICLAFGYSGDV 240
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
A R +A +PK G++LW DL AIPA
Sbjct: 241 FQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|422586173|ref|ZP_16661192.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330880486|gb|EGH14635.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 359
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ ++L Y+G S NS N D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAMLNYLGLSPNSTNEADYKKAEAK------LLAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|302189523|ref|ZP_07266196.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. syringae 642]
Length = 364
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LLAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKSRAEEAGKGVKIAYSIPKEGGNLWFDMLAIPADSK 281
>gi|399040652|ref|ZP_10735990.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
gi|398061439|gb|EJL53235.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
Length = 366
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 29/197 (14%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDW 128
D+ LS+ W + +R DP G +A Y WGT I Y K K + L P D
Sbjct: 99 DKSKLPNLSNMWDMIQQRT--AMYDP-GNEYAVDYMWGTNGIGYNKKKLAEI-LGP--DA 152
Query: 129 KD-----LWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISV 177
K+ ++ P++A + I ++++P++V+ S L Y+G NS+ DLQ AG
Sbjct: 153 KEPGLEAIFDPKVAEKFKDCGIYVLDAPKDVMPSALTYIGLDPNSSKPADLQKAG----- 207
Query: 178 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 231
+ L + R F S+ Y+ A GD+ +A G+S D+ A R + + +P
Sbjct: 208 -ELLEKVRPFVRKFHSSEYINALANGDICIAFGYSGDIFQAANRATEAKNGVEIGYSIPS 266
Query: 232 SGASLWADLWAIPAASR 248
GA +W D+ AIPA ++
Sbjct: 267 QGAQMWFDMMAIPADAK 283
>gi|145633546|ref|ZP_01789275.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|378696696|ref|YP_005178654.1| polyamine transporter subunit [Haemophilus influenzae 10810]
gi|144985915|gb|EDJ92523.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|301169215|emb|CBW28812.1| polyamine transporter subunit [Haemophilus influenzae 10810]
Length = 350
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|30995379|ref|NP_438656.2| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae Rd KW20]
gi|145638587|ref|ZP_01794196.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittII]
gi|260580439|ref|ZP_05848267.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae RdAW]
gi|21431815|sp|P44731.2|POTD2_HAEIN RecName: Full=Spermidine/putrescine-binding periplasmic protein 2;
Short=SPBP; Flags: Precursor
gi|145272182|gb|EDK12090.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittII]
gi|260092781|gb|EEW76716.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae RdAW]
gi|309750089|gb|ADO80073.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein
[Haemophilus influenzae R2866]
Length = 350
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|145634502|ref|ZP_01790211.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittAA]
gi|145268047|gb|EDK08042.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittAA]
Length = 350
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|116051607|ref|YP_789554.1| polyamine ABC transporter [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173152|ref|ZP_15630906.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
gi|115586828|gb|ABJ12843.1| polyamine ABC transporter protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536453|gb|EKA46093.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
Length = 354
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 34/219 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 164
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 165 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 218
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 271
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 293
+ P L +++I+F L A ++ G +P+A
Sbjct: 272 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNA 304
>gi|381352986|pdb|3TTL|A Chain A, Crystal Structure Of Apo-Spue
gi|381352987|pdb|3TTL|B Chain B, Crystal Structure Of Apo-Spue
Length = 340
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 38/254 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 144
E+ G +A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 96 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 155
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E++ + L Y+G N+++ D + A ++ L + F S+ Y+ G
Sbjct: 156 SGDEMLPAALNYLGLDPNTHDPKDYKKA------EEVLTKVRPYVSYFHSSKYISDLANG 209
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGR 257
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 210 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNA---- 265
Query: 258 VRGPSPLIHQWIEFCLQTARALPFKQEV-----IPGASPSALETTLVKLPEELLKGKPSQ 312
+ +I++ L+ V IPGA P L V EE+ +
Sbjct: 266 --------YAFIDYLLRPEVIAKVSDYVGYANAIPGARP--LMDKSVSDSEEVYPPQAVL 315
Query: 313 DTNLIVGVPPAEIL 326
D + V PA++L
Sbjct: 316 DKLYVSAVLPAKVL 329
>gi|386056365|ref|YP_005972887.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|392981709|ref|YP_006480296.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|419756621|ref|ZP_14282967.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|421151364|ref|ZP_15610979.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|347302671|gb|AEO72785.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|384396994|gb|EIE43411.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392317214|gb|AFM62594.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|404527401|gb|EKA37562.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|453045675|gb|EME93393.1| polyamine transport protein [Pseudomonas aeruginosa PA21_ST175]
Length = 365
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 144
E+ G +A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E++ + L Y+G N+++ D + A ++ L + F S+ Y+ G
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKA------EEVLTKVRPYVSYFHSSKYISDLANG 231
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 232 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|218295620|ref|ZP_03496416.1| extracellular solute-binding protein family 1 [Thermus aquaticus
Y51MC23]
gi|218243779|gb|EED10306.1| extracellular solute-binding protein family 1 [Thermus aquaticus
Y51MC23]
Length = 345
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 42/259 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPEL-AGRISMVNSPREVIG 151
DP G + PY WGT +AY++ R P++ + L+ P+ G +++ RE IG
Sbjct: 117 DP-GLQHSVPYLWGTTGLAYREDLVR----GPVDSYAVLFDPKAQVGPFLLLDEMRETIG 171
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG---IGDVWVA 208
+ LKY+G S N+ + + ++ L+A +AR ++A GD V+
Sbjct: 172 AALKYLGYSVNATDPEALEKAKEL-------LIAAKARSVGFAGGVEALNRILAGDAAVS 224
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS-PLIHQ 267
+ +S D+L A + + + V+PK G ++W D + RGPS L ++
Sbjct: 225 LAYSGDLLQARQEDARLRYVIPKEGGTIWTDALVV-------------LKRGPSQDLAYR 271
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
+I+F L+ A A+P A L LPEE+ QD + PP E+ A
Sbjct: 272 FIDFLLRPENAAELAA-YTRYATPVAQAIPL--LPEEM-----RQDPAVF---PPEEVRA 320
Query: 328 RCEFLEPLS-EATLSDYEW 345
R E+L+ L E L D W
Sbjct: 321 RLEYLKDLGPEIALYDRVW 339
>gi|167036227|ref|YP_001671458.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166862715|gb|ABZ01123.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 364
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLAKCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E++ +VL YMG NS + +Q L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTD-----PKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDIC 233
Query: 207 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 234 VAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|421166158|ref|ZP_15624426.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
700888]
gi|404539135|gb|EKA48640.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
700888]
Length = 354
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 106 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 164
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 165 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 218
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 271
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A ++ PE
Sbjct: 272 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIR-PE 313
>gi|421587735|ref|ZP_16033100.1| extracellular solute-binding protein [Rhizobium sp. Pop5]
gi|403707696|gb|EJZ22629.1| extracellular solute-binding protein [Rhizobium sp. Pop5]
Length = 365
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 116/279 (41%), Gaps = 49/279 (17%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIE--DWKDLWR 133
LS+ W V + DP G ++ Y WGT I + K K L E +W L+
Sbjct: 106 LSNMWDVVTKG--VATFDP-GNEYSVDYMWGTTGIGFNVDKV-KAALGTDEKPNWDALFD 161
Query: 134 PELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQ 187
P A + I M++SP +VI SVL Y+G NS DL A Q+ L +
Sbjct: 162 PAKAAKLKDCGIYMLDSPTDVIPSVLAYLGLDPNSKKPDDLNKA------QEVLLAVRPF 215
Query: 188 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 241
R F S+ Y+ A GD+ +A+G+S DV A R + NV VP GA ++ D++
Sbjct: 216 VRKFHSSEYISALANGDICIALGFSGDVFQARDRAAEAKAGVNVDYSVPNQGAQIFFDVF 275
Query: 242 AIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
IP A +E H +I + + K EV AS K
Sbjct: 276 GIPKDAPHVEEA-------------HAFINYMM--------KPEVAAKASNFVFYANGNK 314
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT 339
++ L DT + P EI+A+ + PL T
Sbjct: 315 ASQQFLNKDVIDDTAIY---PTPEIMAKLFTVPPLDPKT 350
>gi|331268532|ref|YP_004395024.1| extracellular solute-binding protein [Clostridium botulinum
BKT015925]
gi|329125082|gb|AEB75027.1| Bacterial extracellular solute-binding protein, putative
[Clostridium botulinum BKT015925]
Length = 347
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ + ++ PY WGT+ I Y + I+ W LW P+ +I MV+S R+ I
Sbjct: 120 FDPKNQ-YSVPYMWGTVGIIYNTKLIKDK----IDSWDALWNPKYKDQILMVDSQRDAIA 174
Query: 152 SVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK +G S N+ N D L+ A ++ Q+ L +A + D L G + AV
Sbjct: 175 VALKKLGYSINTRNKDELKKAEQELMKQKPLV----RAYVGDEVKDLMVDEEGSI--AVV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 247
WS D + +K N+ V+PK G++LW D IP S
Sbjct: 229 WSGDAVTMMKNNPNLRYVIPKEGSNLWFDNMVIPKGS 265
>gi|166030942|ref|ZP_02233771.1| hypothetical protein DORFOR_00623 [Dorea formicigenerans ATCC
27755]
gi|166029209|gb|EDR47966.1| ABC transporter, solute-binding protein [Dorea formicigenerans ATCC
27755]
Length = 576
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
E DP K ++ P+ WGT+ I Y K+ P++ W LW + I M +S R+
Sbjct: 347 EFDPENK-YSVPHLWGTVGILYNKTMVDD----PVDSWGILWNEKYKDSILMQDSVRDAF 401
Query: 151 GSVLKYMGASYNSNNID-LQVAGGKISVQQNL--ALLANQARLFDSTHYLKAFGIGDVWV 207
G LKY+G S NS ++D L A K+ Q+ L A + +QAR K G + +
Sbjct: 402 GITLKYLGYSLNSTDLDELTEAKNKLIEQKPLVQAYVVDQAR-------DKMIG-NEAAL 453
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
AV +S + + ++ V+PK G+++W D W IP ++
Sbjct: 454 AVIYSGEAITCQLENPDLEYVIPKEGSNMWIDSWVIPKNAK 494
>gi|119775774|ref|YP_928514.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
gi|119768274|gb|ABM00845.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
Length = 366
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G A PY WGT I + +K ++ AP++ W ++ P A + I++++S
Sbjct: 121 DP-GNEHAVPYLWGTTGIGFNVAKVKEVLGEDAPVDSWDLIFNPANAEKLAKCGIAVLDS 179
Query: 146 PREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
P E++ L Y+G + NS + D + AG + L + + F S+ Y+ G+
Sbjct: 180 PDEILPPALNYLGLNPNSTDPADYEKAG------EVLLKIRPYLKYFHSSRYISDLANGE 233
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
+ A+GWS DVL A R V +PK GA LW D+ AIP
Sbjct: 234 ICAAIGWSGDVLQAQARAEEAGNGQQVDYRIPKEGAPLWFDMMAIP 279
>gi|346994151|ref|ZP_08862223.1| polyamine ABC transporter periplasmic polyamine-binding protein
PotD [Ruegeria sp. TW15]
Length = 387
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 43/263 (16%)
Query: 85 RRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPI-EDWKDLWRPEL---AGRI 140
R +DAG +D G+++A P WGT A SK + AP WK+ W + +GR
Sbjct: 150 RFSDAGSVD--GQLYAVPKNWGTTGFAVNTSKL---DGAPTPTTWKEFWDLTMEGYSGRT 204
Query: 141 SMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAF 200
+ + IG+ LKY G S+NS V +++ + L L A S+ Y
Sbjct: 205 MVHDYQLTTIGNALKYFGYSFNS------VDEKELADAEKLLLDAKPHLFAISSDYQPPM 258
Query: 201 GIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASRLETKQIGGRVR 259
GD W+ + W+ D M +A V+ G LW+D +AIP A ++
Sbjct: 259 RNGDAWMTMCWTGDGKQMNVDMPEIAYVLGAEGGELWSDYYAIPKGAPHMDAA------- 311
Query: 260 GPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVG 319
+ I+F L +EV+ PSA T LP+ELL+ +
Sbjct: 312 ------YALIDFLLNPEVN---AKEVLAHGYPSADARTNALLPKELLEDP--------IL 354
Query: 320 VPPAEILARCEFLEPLSEATLSD 342
P A++L EF + ATL+D
Sbjct: 355 YPAADLLNALEF---GAAATLTD 374
>gi|398824613|ref|ZP_10582939.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. YR681]
gi|398224754|gb|EJN11050.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. YR681]
Length = 370
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP---I 125
D+ L++ W V R DP G ++AA Y WGT I Y +K K L P I
Sbjct: 103 DKTKLPNLANAWPVVTER--LAIYDP-GNVYAANYMWGTTGIGYNVAKV-KQILGPDAKI 158
Query: 126 EDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQ 179
+ W +++PE + + M++S ++ + L Y+G NS DL+ A +
Sbjct: 159 DSWDIVFKPENLAKFKDCGVHMLDSADDIFPAALSYLGLDPNSTKQADLEKAADIV---- 214
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 233
A + R F S+ YL A G++ VGWS D++ A R + + +PK G
Sbjct: 215 --AKVRPSVRKFHSSEYLSALATGEICFVVGWSGDIMQARARAAEAKSGVEIGYTIPKEG 272
Query: 234 ASLWADLWAIPAASR 248
A ++ D AIPA ++
Sbjct: 273 AQMFFDNLAIPADAK 287
>gi|145628878|ref|ZP_01784678.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
gi|144979348|gb|EDJ89034.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
Length = 350
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|386057442|ref|YP_005973964.1| polyamine transport protein PotD [Pseudomonas aeruginosa M18]
gi|347303748|gb|AEO73862.1| polyamine transport protein PotD [Pseudomonas aeruginosa M18]
Length = 353
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 34/219 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 164 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 217
Query: 201 GIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 218 TLGNIWVAHGYSSDMYQARADAESAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 270
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 293
+ P L +++I+F L A ++ G +P+A
Sbjct: 271 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNA 303
>gi|242239712|ref|YP_002987893.1| putrescine ABC transporter periplasmic-binding protein [Dickeya
dadantii Ech703]
gi|242131769|gb|ACS86071.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech703]
Length = 369
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 143
E DP G +A PY W T I Y K + P+ W + +PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVEKVKAALGKDVPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
++P E+ +VL Y+G NS + + L L R F S+ Y+ G
Sbjct: 180 DAPAEIYATVLNYLGKDPNST----KESDYSKDATDLLLKLRPSIRYFHSSQYINDLANG 235
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
D+ VA+GW+ DV+ A R N++ +PK GA + D++AIP ++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNISYAIPKEGALAFFDVFAIPKDAK 286
>gi|398925409|ref|ZP_10661845.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398172050|gb|EJM59932.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 368
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 32/200 (16%)
Query: 88 DAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----IS 141
D DP G ++APY WG+ + Y K ++ API ++ P++ R ++
Sbjct: 119 DLQGFDP-GTTYSAPYTWGSNGVTYNVDKIKERMPDAPIGSLAMIFDPKIVSRFADCGVT 177
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAF 200
++++P EVI LKY+G NS A + Q+L L + R FDS +YL +
Sbjct: 178 LLDAPTEVIPMALKYLGRDPNS------AAPADLKAAQDLLLSVRPYIRKFDSVNYLTSL 231
Query: 201 GIGDVWVAVGWSSDV------LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
GDV +A+ WS D K+ N+A +PK G+ +W D IPA + +
Sbjct: 232 PNGDVCMAMTWSGDYATAMARAAEAKKQINLAYFIPKEGSLIWFDNMYIPA----DAPHV 287
Query: 255 GGRVRGPSPLIHQWIEFCLQ 274
H+++E+ +Q
Sbjct: 288 ANA--------HKFLEYLMQ 299
>gi|378953501|ref|YP_005210989.1| protein SpuE/PotF2 [Pseudomonas fluorescens F113]
gi|359763515|gb|AEV65594.1| SpuE/PotF2 [Pseudomonas fluorescens F113]
Length = 365
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G ++A PY WGT I Y K + + I+ W L+ PE + +S ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVEKIKAVLGVDKIDSWAMLFEPENIKKLSSCGVSFLDSG 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E+I ++L Y+G + NS + D + A + L + F+S+ Y+ G++
Sbjct: 180 DEMIPAMLNYLGLNPNSEDPEDYKKA------EAQLLKIRPYVTYFNSSKYISDLANGEI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S D+ A +R S ++A V+PK G +LW D+ AIP
Sbjct: 234 CVAAGFSGDIFQARERASEAGKGVDIAYVIPKEGGNLWFDMLAIP 278
>gi|355640046|ref|ZP_09051536.1| hypothetical protein HMPREF1030_00622 [Pseudomonas sp. 2_1_26]
gi|354831566|gb|EHF15578.1| hypothetical protein HMPREF1030_00622 [Pseudomonas sp. 2_1_26]
Length = 353
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 89 AGEID---PRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRIS 141
AG +D +G ++ PY + T ++ Y K++ K + P DW ++ P ++ GR++
Sbjct: 105 AGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVT 163
Query: 142 MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAF 200
+++ P+E+ G+ LKY+G S +N+ D Q Q L L A F+S+ Y+K
Sbjct: 164 VMDDPQELFGAALKYLGHS--ANDTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKEL 217
Query: 201 GIGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQI 254
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 218 TLGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS------- 270
Query: 255 GGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 303
+ P L +++I+F L A ++ G +P+A ++ PE
Sbjct: 271 ----KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIR-PE 312
>gi|407776772|ref|ZP_11124044.1| extracellular solute-binding protein [Nitratireductor pacificus
pht-3B]
gi|407301468|gb|EKF20588.1| extracellular solute-binding protein [Nitratireductor pacificus
pht-3B]
Length = 365
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP-IED 127
D+ L++ W + R DP G ++ Y WGT I Y +K + P I+
Sbjct: 99 DKSKLPNLANMWDMISERT--ATYDP-GNEYSINYMWGTTGIGYNAAKAEEILGTPKIDT 155
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 182
W L++PE+A + I M++S EV+ + L Y G + N+ + D ++ L
Sbjct: 156 WDVLFQPEVAAKFKDCGIHMLDSASEVVRAALIYQGLNPNTPSAD-----DLARAEELLT 210
Query: 183 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASL 236
+ R F S+ Y+ GD+ +A+G+S D+ A R + V +PK GA L
Sbjct: 211 AVRPNVRKFHSSEYINGLANGDICLALGYSGDIFQARDRAAEADQGVAVGYAIPKEGALL 270
Query: 237 WADLWAIPA 245
W D AIPA
Sbjct: 271 WFDQMAIPA 279
>gi|398839011|ref|ZP_10596261.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398113641|gb|EJM03485.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 365
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + L I+ W ++ P+ + ++ ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGLDKIDSWDVVFEPQNIKKLHSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 234 CVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|339624373|ref|ZP_08660162.1| spermidine/putrescine-binding periplasmic protein [Fructobacillus
fructosus KCTC 3544]
Length = 359
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 14/161 (8%)
Query: 95 RGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
RG ++ PY WGT+ I Y K ++ N + + +W LW + ++ +V+S R+++G L
Sbjct: 130 RGNQYSIPYFWGTLGILYNK---KEVNGSELTNWSALWSAKYRNQVLLVDSARDILGMTL 186
Query: 155 KYMGASYNSNNI-DLQVAGGKISVQQNLALLAN-QARLFDSTHYLKAFGIGDVWVAVGWS 212
G S N N+ DL A GK+S +L+ N +A + D A G G +AV +S
Sbjct: 187 ISQGKSVNDQNVADLAAAQGKLS-----SLMPNVKAIVGDELKLYMAQGEGS--LAVTYS 239
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQ 253
+ A++R ++A VP+ G++LW D IP ++ E KQ
Sbjct: 240 GEAKNAMERNPDLAYTVPEDGSNLWLDNLVIPKSA--EHKQ 278
>gi|117621460|ref|YP_858560.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117562867|gb|ABK39815.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 361
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++L+ IK + + D L++ V L++ D ++DP G +A P
Sbjct: 73 DLVVPSNNFLAKQIKAGAFQKL----DPALLPNLANLDPVLLKQLD--KVDP-GHQYAVP 125
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W ++ PE + ++ ++S E+I + L Y
Sbjct: 126 YLWGTNGIGYNIDKVKAVLGVDKIDSWAVIFEPENMQKLARCGVAFLDSADEMIPAALNY 185
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G + NS + DL+ A ++ L + F S+ Y+ GD+ VA G+S D+
Sbjct: 186 LGLNPNSQDPADLKRA------EEQLLKVRPYVAYFHSSKYIGDLANGDICVAAGFSGDI 239
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
L A R +A +PK G +LW D+ AIPA
Sbjct: 240 LQAAARADEAGKGIKIAYSIPKEGGNLWFDMMAIPA 275
>gi|116513745|ref|YP_812651.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|385815365|ref|YP_005851756.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|418035487|ref|ZP_12673944.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|116093060|gb|ABJ58213.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125402|gb|ADY84732.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|354690476|gb|EHE90424.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 360
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 83/153 (54%), Gaps = 14/153 (9%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y +K I+ W DLW+ + G+I +V+S R+++G L MG
Sbjct: 134 YSVPYFWGTLGIVYNDRYVKK---GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMG 190
Query: 159 ASYN-SNNIDLQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N+ L+ A K+ + +N+ A++A++ +++ + + W+ V +S +
Sbjct: 191 YSMNDTNSAHLKAAKAKLDKIGKNVKAIVADELKMYMVQN--------EAWIGVTYSGEA 242
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ + S++ VVP G++LW D IP +
Sbjct: 243 AMMMDQDSHIHYVVPAQGSNLWFDNIVIPKTCK 275
>gi|425899671|ref|ZP_18876262.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397890487|gb|EJL06969.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 362
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + +L+ +K + A+ +W + L K L +ND G ++ P
Sbjct: 74 DLVVPSNHFLARQVKAGAFLKLDRAQLPNW-QNLDPKLLALLEQNDPG------NQYSVP 126
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT I Y K ++ + I+ W + P+ + +SM++SP EV ++L Y
Sbjct: 127 YLWGTNGIGYNVDKVKQVLGIDSIDSWAVFFEPQNLKKLSQCGVSMMDSPDEVFPAMLNY 186
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G S N D + A K L + F S+ Y+ G++ +A G+S DV
Sbjct: 187 LGLDPRSENPADYKKAEAK------LLAIRPYITYFHSSKYVSDLANGNICLAFGYSGDV 240
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
A R +A +PK G++LW DL AIPA
Sbjct: 241 FQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|126173349|ref|YP_001049498.1| extracellular solute-binding protein [Shewanella baltica OS155]
gi|386340106|ref|YP_006036472.1| extracellular solute-binding protein [Shewanella baltica OS117]
gi|418023188|ref|ZP_12662173.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS625]
gi|125996554|gb|ABN60629.1| extracellular solute-binding protein, family 1 [Shewanella baltica
OS155]
gi|334862507|gb|AEH12978.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS117]
gi|353537071|gb|EHC06628.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS625]
Length = 366
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ IK +P+ A+ + FK L+ L + D G +A P
Sbjct: 77 DIVVPSNHFLAKQIKAGAFKPLDRAKLPN-FKNLNPALMKLLEKADPG------NQYAVP 129
Query: 103 YRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLK 155
Y WGT I Y K + AP + ++ P+ A +IS M++S +++ L
Sbjct: 130 YLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDSADDMVPQALI 189
Query: 156 YMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS+N D + AG + L + F S+ Y+ GD+ VA G+S D
Sbjct: 190 YLGLDPNSSNPSDYEKAG------ELLEKIRPYVTYFHSSRYISDLANGDICVAFGFSGD 243
Query: 215 VLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 247
V A R + + +PK GA+LW D+ AIPA S
Sbjct: 244 VFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|372276175|ref|ZP_09512211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. SL1_M5]
Length = 369
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G N+++ + +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYLGKDPNTSDAK-EYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GWS D+L A R ++ VPK GA + D+ AIP ++
Sbjct: 238 CVAIGWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|346306552|ref|ZP_08848707.1| hypothetical protein HMPREF9457_00416 [Dorea formicigenerans
4_6_53AFAA]
gi|345908255|gb|EGX77912.1| hypothetical protein HMPREF9457_00416 [Dorea formicigenerans
4_6_53AFAA]
Length = 632
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
E DP K ++ P+ WGT+ I Y K+ P++ W LW + I M +S R+
Sbjct: 403 EFDPENK-YSVPHLWGTVGILYNKTMVDD----PVDSWGILWNEKYKDSILMQDSVRDAF 457
Query: 151 GSVLKYMGASYNSNNID-LQVAGGKISVQQNL--ALLANQARLFDSTHYLKAFGIGDVWV 207
G LKY+G S NS ++D L A K+ Q+ L A + +QAR K G + +
Sbjct: 458 GITLKYLGYSLNSTDLDELTEAKNKLIEQKPLVQAYVVDQAR-------DKMIG-NEAAL 509
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
AV +S + + ++ V+PK G+++W D W IP ++
Sbjct: 510 AVIYSGEAITCQLENPDLEYVIPKEGSNMWIDSWVIPKNAK 550
>gi|357049604|ref|ZP_09110823.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
gi|355383069|gb|EHG30156.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
Length = 359
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 130/322 (40%), Gaps = 55/322 (17%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPI-----AGAEDQDWFKCLSHKWKVYLR 85
KVK Y DL+ +S + I+++L+ P+ G+ED F + ++
Sbjct: 79 KVKQGGTRY---DLIFPSESMIPKMIEEQLLIPLEHDKLVGSEDLSDF-LMDQRFD---- 130
Query: 86 RNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 145
+ ++ PY WGT+ I + I W DLWRPE A I +V+
Sbjct: 131 ---------KNNHYSIPYFWGTIGIMVNSDQIDP---TTIHGWADLWRPEFANDILVVDG 178
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLAN-QARLFDSTHYLKAFGIGD 204
RE +G L+ + S N +L A + ++++ AL N +A L D L D
Sbjct: 179 ARETLGMALQTLDLSQN----ELDTANLQQAIEKLEALRPNVKAVLTDEIKTLMVN--ND 232
Query: 205 VWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL 264
+ +G+S D + + VVP G ++W D +AIP G + G
Sbjct: 233 APIGIGYSGDAAYVMSENPAITYVVPNDGGAIWTDNFAIPKTV--------GNLEGA--- 281
Query: 265 IHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE 324
+ +I F L+ A E + A+PS ET LP EL K P E
Sbjct: 282 -YAFINFMLRPENAAQ-NAEYVGYATPS--ETAKQLLPTELTSNKAF--------YPEPE 329
Query: 325 ILARCEFLEPLSEATLSDYEWL 346
+ + E E L + + Y L
Sbjct: 330 AMQQMEHYEYLGKNAVEQYNDL 351
>gi|347736466|ref|ZP_08869099.1| putrescine-binding periplasmic protein PotF [Azospirillum
amazonense Y2]
gi|346920037|gb|EGY01308.1| putrescine-binding periplasmic protein PotF [Azospirillum
amazonense Y2]
Length = 360
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMV 143
E+DP G +AA Y+WGT+ I Y K + A I+ WK ++ PE A + I ++
Sbjct: 117 AEVDP-GNEYAAIYQWGTVGIGYNPDKVKAALGTATIDSWKQVFDPENAKKLASCGIVVL 175
Query: 144 NSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHY---LKAF 200
+SP +++ SVL Y+G +S D G+ L + R + T +
Sbjct: 176 DSPADILPSVLNYLGLPPSSEKSDDVKKAGE---------LMSSIRPYIKTFVPSVIDPL 226
Query: 201 GIGDVWVAVGWSSDVLPAVKRMSN---VAVVVPKSGASLWADLWAIPAAS 247
GD VA+G+S DVL A R + +PK GA LW D AIPA +
Sbjct: 227 ASGDACVAIGYSGDVLQAQARSGGKVKIDYAIPKEGAQLWFDTLAIPAGA 276
>gi|422642389|ref|ZP_16705807.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440745316|ref|ZP_20924611.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
gi|330954771|gb|EGH55031.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440372683|gb|ELQ09469.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
Length = 364
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LLAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKSRAEEAGKGVKIAYSIPKEGGNLWFDMLAIPADSK 281
>gi|304397032|ref|ZP_07378911.1| extracellular solute-binding protein family 1 [Pantoea sp. aB]
gi|304355181|gb|EFM19549.1| extracellular solute-binding protein family 1 [Pantoea sp. aB]
Length = 369
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G NS++ +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAK-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GWS D+L A R ++ VPK GA + D+ AIP ++
Sbjct: 238 CVAIGWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|449468189|ref|XP_004151804.1| PREDICTED: putrescine-binding periplasmic protein-like, partial
[Cucumis sativus]
Length = 292
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ + +W K+ + DP K +A P
Sbjct: 8 DLVVPSASFLERQLTAGVFQPLDKNKLSNWKNLDPEVLKLVAKH------DPDNK-YAMP 60
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y W T I + K K L P ++ W + +PE + +S +++P E+ +VL
Sbjct: 61 YLWATTGIGFNVDKV-KAALGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVL 119
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ D
Sbjct: 120 NYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGD 175
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
V A R NV+ +PK GA + D++A+PA ++
Sbjct: 176 VWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 215
>gi|260772830|ref|ZP_05881746.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
gi|260611969|gb|EEX37172.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
Length = 345
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 133/312 (42%), Gaps = 43/312 (13%)
Query: 29 FNKVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND 88
+ K+K + A Y DLV ++S K+ +++PI D++ + +L ++
Sbjct: 65 YAKLKTQGAGY---DLVVPSTYFVSKMRKEGMLQPI----DKNQLSHFADLDPNFLNKS- 116
Query: 89 AGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPRE 148
DP + ++ PY WG I K L +W DLW + G++ +++ RE
Sbjct: 117 ---FDPENR-YSIPYIWGATGIGINTDMLDKSALT---NWNDLWDAKWRGQLMLMDDARE 169
Query: 149 VIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
V L +G S NS N + A Q L L +F+S F G+V +
Sbjct: 170 VFHMALSKLGYSPNSTNPEEIEAA-----YQELTKLMPNVLVFNSDFPANPFLAGEVSLG 224
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
+ W+ A + +N+ ++ P+ GA W D AIPA + K I H+
Sbjct: 225 MLWNGSAYMARQEGANIEIIWPEKGAIFWMDSIAIPAGA----KNIEAA--------HKM 272
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I+F L+ A E+ P+ ++T LP E + D N+ PP ++
Sbjct: 273 IDFLLRPENAAKIALEI---GYPTPVKTAHKLLPAEFV-----NDPNIF---PPQSVMES 321
Query: 329 CEFLEPLSEATL 340
E+ + + EA++
Sbjct: 322 GEWQDDVGEASI 333
>gi|222147628|ref|YP_002548585.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
gi|221734616|gb|ACM35579.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
Length = 371
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIE 126
D+ L++ W + + R DP G +A Y WGT I Y K + + ++
Sbjct: 104 DKSKLPNLTNMWPMVMER--LANYDP-GNQYAVNYMWGTTGIGYNVKKIKAIFGDDVKVD 160
Query: 127 DWKDLWRPELAGRI-----SMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 181
W +++PE A ++ +++++ E + Y+G +S AG K+
Sbjct: 161 SWDFIFKPENAKKLKQCGLNILDASDETFAIAMNYIGKPADSKKTADLEAGAKV-----Y 215
Query: 182 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGAS 235
+ A+ F+S+ YL GD+ +GWS DV+ A KR +A V+PK G
Sbjct: 216 QAIRPSAKTFNSSSYLNDLANGDICATIGWSGDVIQAKKRAEEAKNGVEIAYVIPKEGTY 275
Query: 236 LWADLWAIPAASR 248
+W D AIPA ++
Sbjct: 276 MWFDNLAIPADAK 288
>gi|83941880|ref|ZP_00954342.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. EE-36]
gi|83847700|gb|EAP85575.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. EE-36]
Length = 361
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIE 126
D+D +++ W V R + DP G +A Y WGT + +K ++ AP++
Sbjct: 94 DKDKLPNITNMWDVIEDR--VSKYDP-GNEYAVNYMWGTTGLGVNMTKVKEVLGEDAPVD 150
Query: 127 DWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 181
+++PE +++ +++P E+I + LK++G S + D+ + L
Sbjct: 151 SLDLVFKPENMEKLAECGVHFLDAPTEMIPAALKFLGEDPQSQDPDVIAKAEPV-----L 205
Query: 182 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGAS 235
+A + F S+ Y+ A GD+ VA GWS D+L + R + +A PK GA
Sbjct: 206 TAVAPHVQKFHSSEYINALANGDICVAFGWSGDILQSRDRAAEADNGVEIAYYAPKEGAL 265
Query: 236 LWADLWAIPA 245
+W D AIPA
Sbjct: 266 MWFDNMAIPA 275
>gi|373948568|ref|ZP_09608529.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS183]
gi|386325590|ref|YP_006021707.1| extracellular solute-binding protein [Shewanella baltica BA175]
gi|333819735|gb|AEG12401.1| extracellular solute-binding protein family 1 [Shewanella baltica
BA175]
gi|373885168|gb|EHQ14060.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS183]
Length = 366
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ IK +P+ A+ + FK L+ L + D G +A P
Sbjct: 77 DIVVPSNHFLAKQIKAGAFKPLDRAKLPN-FKNLNPALMKLLEKADPG------NQYAVP 129
Query: 103 YRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLK 155
Y WGT I Y K + AP + ++ P+ A +IS M++S +++ L
Sbjct: 130 YLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDSADDMVPQALI 189
Query: 156 YMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS+N D + AG + L + F S+ Y+ GD+ VA G+S D
Sbjct: 190 YLGLDPNSSNPSDYEKAG------ELLEKIRPYVTYFHSSRYISDLANGDICVAFGFSGD 243
Query: 215 VLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 247
V A R + + +PK GA+LW D+ AIPA S
Sbjct: 244 VFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|148825225|ref|YP_001289978.1| cytoplasmic sugar-binding protein [Haemophilus influenzae PittEE]
gi|229846583|ref|ZP_04466691.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
gi|148715385|gb|ABQ97595.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittEE]
gi|229810676|gb|EEP46394.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
Length = 350
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP +++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPNSAQ--------NVEG----AHKFIDFLLRPENA 287
>gi|294852922|ref|ZP_06793595.1| putrescine transport system substrate-binding protein [Brucella sp.
NVSL 07-0026]
gi|294821511|gb|EFG38510.1| putrescine transport system substrate-binding protein [Brucella sp.
NVSL 07-0026]
Length = 369
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIED 127
D+D L + W R A DP G + Y WGT I Y K+K ++ I+
Sbjct: 102 DKDKLPNLKNMWDEISTR--AATYDP-GNEYFVNYMWGTTGIGYNKAKIKEALGTDTIDS 158
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 181
W L+ PE + I +++S E++ L Y+G NS + DLQ A Q+L
Sbjct: 159 WDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKA-------QDL 211
Query: 182 AL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS-------NVAVVVPKSG 233
L + R F S+ Y+ A GD+ +AVG+S D+ A R + +PK G
Sbjct: 212 YLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEKAKQEGVEIGYSIPKEG 271
Query: 234 ASLWADLWAIPAASR 248
A +W D AIPA ++
Sbjct: 272 ALIWFDQMAIPADAK 286
>gi|381182867|ref|ZP_09891648.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
gi|380317249|gb|EIA20587.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
Length = 357
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W LW +L +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKKMFPDKNF---DHWDSLWDKDLENQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N L+ A K+ + N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNEKHLEEALLKLKKMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ +++ V+PK G++LW D IP ++ V G HQ+I F L+
Sbjct: 241 SEMLSENADLDYVIPKEGSNLWFDNMVIPKTAK--------NVDGA----HQFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+ L LP+E+ SQD P L E + L
Sbjct: 289 ENA-AINAEYVGYATPNKAAIKL--LPKEI-----SQDKRF---YPDMNELDNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSHYNELFLEFK 353
>gi|222084921|ref|YP_002543450.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
gi|221722369|gb|ACM25525.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
Length = 374
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 26/192 (13%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK---HNLAPI 125
D+ +S+ W +R DP G +A Y WGT + Y K ++ + AP
Sbjct: 108 DKSKLPNISNMWDTVQQR--IAAYDP-GNQYAVDYMWGTSGVGYNVDKVKQILGTDEAP- 163
Query: 126 EDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQ 179
D ++ P LA + I +++SP +VI + L+Y+G NS D + A ++
Sbjct: 164 -DINVIFDPALAAKFKDCGIYVLDSPTDVIPAALRYLGLDPNSTKPEDFKKA------EE 216
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 233
L + R F S+ Y+ A GD+ + G+S DVL A R + N++ +PK G
Sbjct: 217 LLTAVRPNIRKFHSSEYINALANGDICLTFGYSGDVLQARNRAAEAKNGINISYSIPKKG 276
Query: 234 ASLWADLWAIPA 245
A +W D+ AIPA
Sbjct: 277 AQMWFDVMAIPA 288
>gi|308186216|ref|YP_003930347.1| spermidine/putrescine-binding periplasmic protein 2 [Pantoea vagans
C9-1]
gi|390433313|ref|ZP_10221851.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea agglomerans IG1]
gi|308056726|gb|ADO08898.1| Spermidine/putrescine-binding periplasmic protein 2 precursor
[Pantoea vagans C9-1]
Length = 369
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y+G N+++ + +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYLGKDPNTSDAK-EYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GWS D+L A R ++ VPK GA + D+ AIP ++
Sbjct: 238 CVAIGWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|385787871|ref|YP_005818980.1| putrescine ABC transporter periplasmic-binding protein [Erwinia sp.
Ejp617]
gi|310767143|gb|ADP12093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Erwinia sp. Ejp617]
Length = 369
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY W T I Y K + AP+ W + +PE R +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLARLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y G NS++ +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYQGKDPNSSDAK-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP--AASRLETKQIGGR 257
VA+GW+ DVL A R ++A +PK GA + D AIP A + E Q
Sbjct: 238 CVAIGWAGDVLQAKNRALAAKNGVDIAYSIPKEGALAFFDTLAIPKDAKNVDEAYQFLNY 297
Query: 258 VRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 293
+ P + I + + ++PF I PG P A
Sbjct: 298 LLKPEVMAQISNAVFYASGNKASVPFVDAAIRNNPGVYPPA 338
>gi|319775579|ref|YP_004138067.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae F3047]
gi|329122378|ref|ZP_08250965.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
gi|317450170|emb|CBY86384.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae F3047]
gi|327473660|gb|EGF19079.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
Length = 350
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+V + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP +++ V G H++I+F L+ A
Sbjct: 243 NQSLQFVYPKEGAIFWMDNYAIPNSAQ--------NVEGA----HKFIDFLLRPENA 287
>gi|257868707|ref|ZP_05648360.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257802871|gb|EEV31693.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 356
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 130/322 (40%), Gaps = 55/322 (17%)
Query: 31 KVKAKSAPYMAADLVSVGDSWLSFAIKKRLIEPI-----AGAEDQDWFKCLSHKWKVYLR 85
KVK Y DL+ +S + I+++L+ P+ G+ED F + ++
Sbjct: 76 KVKQGGTRY---DLIFPSESMIPKMIEEQLLIPLEHDKLVGSEDLSDF-LMDQRFD---- 127
Query: 86 RNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNS 145
+ ++ PY WGT+ I + I W DLWRPE A I +V+
Sbjct: 128 ---------KNNHYSIPYFWGTIGIMVNSDQIDP---TTIHGWADLWRPEFANDILVVDG 175
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLAN-QARLFDSTHYLKAFGIGD 204
RE +G L+ + S N +L A + ++++ AL N +A L D L D
Sbjct: 176 ARETLGMALQTLDLSQN----ELDTANLQQAIEKLEALRPNVKAVLTDEIKTLMVN--ND 229
Query: 205 VWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL 264
+ +G+S D + + VVP G ++W D +AIP G + G
Sbjct: 230 APIGIGYSGDAAYVMSENPAITYVVPNDGGAIWTDNFAIPKTV--------GNLEGA--- 278
Query: 265 IHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE 324
+ +I F L+ A E + A+PS ET LP EL K P E
Sbjct: 279 -YAFINFMLRPENAAQ-NAEYVGYATPS--ETAKQLLPTELTSNKAF--------YPEPE 326
Query: 325 ILARCEFLEPLSEATLSDYEWL 346
+ + E E L + + Y L
Sbjct: 327 AMQQMEHYEYLGKNAVEQYNDL 348
>gi|229549230|ref|ZP_04437955.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis ATCC
29200]
gi|255971945|ref|ZP_05422531.1| extracellular solute-binding protein [Enterococcus faecalis T1]
gi|256957883|ref|ZP_05562054.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300860252|ref|ZP_07106339.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Enterococcus
faecalis TUSoD Ef11]
gi|312953676|ref|ZP_07772513.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0102]
gi|384519446|ref|YP_005706751.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis 62]
gi|422693431|ref|ZP_16751445.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0031]
gi|422710807|ref|ZP_16767742.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0027]
gi|422725774|ref|ZP_16782231.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0312]
gi|428767801|ref|YP_007153912.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Enterococcus faecalis str. Symbioflor 1]
gi|229305467|gb|EEN71463.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis ATCC
29200]
gi|255962963|gb|EET95439.1| extracellular solute-binding protein [Enterococcus faecalis T1]
gi|256948379|gb|EEU65011.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300849291|gb|EFK77041.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Enterococcus
faecalis TUSoD Ef11]
gi|310628514|gb|EFQ11797.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0102]
gi|315035159|gb|EFT47091.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0027]
gi|315151943|gb|EFT95959.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0031]
gi|315159176|gb|EFU03193.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0312]
gi|323481579|gb|ADX81018.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis 62]
gi|427185974|emb|CCO73198.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Enterococcus faecalis str. Symbioflor 1]
Length = 357
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|227329301|ref|ZP_03833325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 369
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP+ W + +PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVEKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y G NS G + +L L L R F S+ Y+ GD
Sbjct: 182 PEEIFATVLNYQGKDPNSTK-----PGDYTTSATDLLLKLRPNIRYFHSSQYINDLANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VAVGW+ D+L A R N+ +PK GA + D+ AIP ++
Sbjct: 237 ICVAVGWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|50121601|ref|YP_050768.1| putrescine ABC transporter periplasmic-binding protein
[Pectobacterium atrosepticum SCRI1043]
gi|49612127|emb|CAG75577.1| putrescine-binding periplasmic protein [Pectobacterium atrosepticum
SCRI1043]
Length = 369
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVDKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E+ +VL Y G NS G + +L L L R F S+ Y+ GD
Sbjct: 182 PEEIFATVLNYQGKDPNSTK-----PGDYTTSATDLLLKLRPSIRYFHSSQYINDLANGD 236
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ VAVGW+ D++ A R N+ +PK GA + D+ AIP ++
Sbjct: 237 ICVAVGWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|350270463|ref|YP_004881771.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Oscillibacter valericigenes Sjm18-20]
gi|348595305|dbj|BAK99265.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Oscillibacter valericigenes Sjm18-20]
Length = 357
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 40/269 (14%)
Query: 88 DAGEIDPR--------GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGR 139
+A ++DP+ ++ PY WGT+ I Y + + I W L+ P+ AG+
Sbjct: 115 NAADVDPQFLNPAYDPDNAYSVPYMWGTVGIIYNTTMVDEA----ITSWDALFDPKYAGQ 170
Query: 140 ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKA 199
+ M+N+ R+ IG LK +G SYN+ + + +QQ + QA + D + K
Sbjct: 171 VLMINNSRDAIGVALKDLGYSYNTTDQAQITEAVNLLIQQKKDGIV-QAYVMDEI-FDKL 228
Query: 200 FGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVR 259
G G+ + V ++ D L ++ VVP G++++ D IPA + Q G
Sbjct: 229 EG-GEAAIGVYYAGDYLTMHDNNPDLTFVVPSEGSNIFTDAMCIPAGA---ANQENGE-- 282
Query: 260 GPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVG 319
++I F T + + + T L+ + + L P+ +N V
Sbjct: 283 -------KFINFMCSTEVGVANCEAI-------GYSTPLMSVKDAL---DPAITSN-PVA 324
Query: 320 VPPAEILARCEFLEPLSEATLS--DYEWL 346
P +LA CE L +ATL D EWL
Sbjct: 325 YPSDAVLASCEPFLNLPDATLKFYDSEWL 353
>gi|256616843|ref|ZP_05473689.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
4200]
gi|307276893|ref|ZP_07558003.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2134]
gi|421514559|ref|ZP_15961247.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecalis ATCC 29212]
gi|256596370|gb|EEU15546.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
4200]
gi|306506316|gb|EFM75476.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2134]
gi|401672347|gb|EJS78817.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecalis ATCC 29212]
Length = 357
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|259908954|ref|YP_002649310.1| putrescine ABC transporter periplasmic-binding protein [Erwinia
pyrifoliae Ep1/96]
gi|387871873|ref|YP_005803248.1| putrescine ABC transporter substrate-binding protein [Erwinia
pyrifoliae DSM 12163]
gi|224964576|emb|CAX56089.1| Putrescine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96]
gi|283478961|emb|CAY74877.1| putrescine ABC transport system, periplasmic component [Erwinia
pyrifoliae DSM 12163]
Length = 369
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY W T I Y K + AP+ W + +PE R +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLARLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y G NS++ +G + L L R F S+ Y+ G++
Sbjct: 182 PEEIFATVLNYQGKDPNSSDAK-DYSGAATDL---LLKLRPNIRYFHSSQYINDLANGNI 237
Query: 206 WVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP--AASRLETKQIGGR 257
VA+GW+ DVL A R ++A +PK GA + D AIP A + E Q
Sbjct: 238 CVAIGWAGDVLQAKNRALAAKNGVDIAYSIPKEGALAFFDTLAIPKDAKNVDEAYQFLNY 297
Query: 258 VRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 293
+ P + I + + ++PF I PG P A
Sbjct: 298 LLKPEVMAQISNAVFYASGNKASVPFVDAAIRNNPGVYPPA 338
>gi|29377133|ref|NP_816287.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Enterococcus faecalis V583]
gi|227554141|ref|ZP_03984188.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
HH22]
gi|256853954|ref|ZP_05559319.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8]
gi|257084376|ref|ZP_05578737.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
gi|257420047|ref|ZP_05597041.1| extracellular solute-binding protein [Enterococcus faecalis T11]
gi|307290343|ref|ZP_07570258.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0411]
gi|422684915|ref|ZP_16743140.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4000]
gi|422701166|ref|ZP_16759007.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1342]
gi|422712163|ref|ZP_16768939.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309A]
gi|422715506|ref|ZP_16772225.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309B]
gi|422720055|ref|ZP_16776678.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0017]
gi|422731739|ref|ZP_16788090.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0645]
gi|422741529|ref|ZP_16795554.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2141]
gi|29344599|gb|AAO82357.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecalis V583]
gi|227176767|gb|EEI57739.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
HH22]
gi|256710897|gb|EEU25940.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8]
gi|256992406|gb|EEU79708.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
gi|257161875|gb|EEU91835.1| extracellular solute-binding protein [Enterococcus faecalis T11]
gi|295113614|emb|CBL32251.1| Spermidine/putrescine-binding periplasmic protein [Enterococcus sp.
7L76]
gi|306498536|gb|EFM68038.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0411]
gi|315030300|gb|EFT42232.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4000]
gi|315032776|gb|EFT44708.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0017]
gi|315143826|gb|EFT87842.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2141]
gi|315162146|gb|EFU06163.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0645]
gi|315170420|gb|EFU14437.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1342]
gi|315576248|gb|EFU88439.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309B]
gi|315582893|gb|EFU95084.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309A]
Length = 357
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|423093076|ref|ZP_17080872.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q2-87]
gi|397882270|gb|EJK98757.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q2-87]
Length = 365
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR--- 139
L RND G +A PY WGT I Y +K + + I+ W L+ PE +
Sbjct: 117 LERNDPG------NQYAVPYLWGTNGIGYNVAKIKAVLGVDKIDSWAMLFEPENIKKLSS 170
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHY 196
+S ++S E+I ++L Y+G S NS + D + A + L + F+S+ Y
Sbjct: 171 CGVSFLDSGDEMIPAMLNYLGLSPNSEDPEDYKKA------EAQLLKIRPYVTYFNSSKY 224
Query: 197 LKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
+ G++ VA G+S D+ A R S +A V+PK G +LW D+ AIP
Sbjct: 225 ISDLANGEICVAAGFSGDIFQARARASEAGKGVEIAYVIPKEGGNLWFDMLAIP 278
>gi|227519669|ref|ZP_03949718.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX0104]
gi|424677622|ref|ZP_18114473.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV103]
gi|424680384|ref|ZP_18117191.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV116]
gi|424684841|ref|ZP_18121550.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV129]
gi|424687545|ref|ZP_18124181.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV25]
gi|424690852|ref|ZP_18127381.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV31]
gi|424693828|ref|ZP_18130240.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV37]
gi|424698568|ref|ZP_18134851.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV41]
gi|424701209|ref|ZP_18137385.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV62]
gi|424705404|ref|ZP_18141456.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV63]
gi|424706470|ref|ZP_18142473.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV65]
gi|424717522|ref|ZP_18146812.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV68]
gi|424719423|ref|ZP_18148570.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV72]
gi|424723843|ref|ZP_18152797.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV73]
gi|424728208|ref|ZP_18156820.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV81]
gi|424734849|ref|ZP_18163330.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV85]
gi|424750919|ref|ZP_18178974.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV93]
gi|227072893|gb|EEI10856.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX0104]
gi|402354118|gb|EJU88933.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV103]
gi|402354612|gb|EJU89418.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV116]
gi|402360329|gb|EJU94932.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV129]
gi|402363223|gb|EJU97715.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV31]
gi|402363828|gb|EJU98285.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV25]
gi|402371717|gb|EJV05864.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV41]
gi|402372422|gb|EJV06543.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV62]
gi|402372588|gb|EJV06701.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV37]
gi|402379302|gb|EJV13115.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV63]
gi|402384678|gb|EJV18221.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV68]
gi|402387632|gb|EJV21105.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV65]
gi|402394436|gb|EJV27609.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV81]
gi|402396334|gb|EJV29397.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV72]
gi|402396922|gb|EJV29965.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV73]
gi|402405698|gb|EJV38284.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV85]
gi|402406149|gb|EJV38712.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV93]
Length = 357
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|90021014|ref|YP_526841.1| transcription factor jumonji, jmjC [Saccharophagus degradans 2-40]
gi|89950614|gb|ABD80629.1| extracellular solute-binding protein, family 1 [Saccharophagus
degradans 2-40]
Length = 365
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 23/169 (13%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 143
++DP+ PY WGT I Y K + P+ W ++ PE+AG+ IS++
Sbjct: 118 DLDPQNN-HMVPYMWGTTGIGYNVDKIKSLLGKDVPVNTWALIFNPEIAGKLASCGISLM 176
Query: 144 NSPREVIGSVLKYMG--ASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
+ EV + Y+G AS S VA ++N+ R F S+ Y+
Sbjct: 177 DDATEVFAAAKIYLGIDASDFSKATQEAVAALVAKTRKNI-------RYFHSSQYINDLA 229
Query: 202 IGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
GD+ VA G+S DVL A R NVA VP+ GA +W+D+ IP
Sbjct: 230 NGDLCVAHGYSGDVLQARARAEEAEKGVNVAYTVPQEGAVVWSDVMVIP 278
>gi|399519023|ref|ZP_10759831.1| putrescine transport system substrate-binding protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112847|emb|CCH36389.1| putrescine transport system substrate-binding protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 363
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 31/197 (15%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVN 144
E + G +A PY WGT I Y K + + I+ W L+ E ++S ++
Sbjct: 116 ETNDPGNQYAVPYLWGTNGIGYNVEKVKAVLGVEEIDSWAVLFEAENIKKLSQCGVAFLD 175
Query: 145 SPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
S E+I ++L Y+G NS N D + L + F S+ Y+ G+
Sbjct: 176 SGDEMIPAMLNYLGLDPNSTNPD-----DYAKAEAKLLEVRPYVTYFHSSKYIGDLANGN 230
Query: 205 VWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLETKQIGGR 257
+ +A G+S DVL A R +A V+PK GA+LW D+ AIPA A+ +E
Sbjct: 231 ICIAAGFSGDVLQAADRADEAGKGIEIAYVIPKEGANLWFDMMAIPADAANVEQA----- 285
Query: 258 VRGPSPLIHQWIEFCLQ 274
H +I F L+
Sbjct: 286 --------HAFINFLLE 294
>gi|398857090|ref|ZP_10612793.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398241404|gb|EJN27056.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 365
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + L I+ W ++ P+ + ++ ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGLDKIDSWDVVFEPQNIKKLHSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA+G+S D+ A R + N+A +PK G +LW D+ AIP
Sbjct: 234 CVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIP 278
>gi|255974999|ref|ZP_05425585.1| extracellular solute-binding protein [Enterococcus faecalis T2]
gi|256961096|ref|ZP_05565267.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
gi|293384042|ref|ZP_06629936.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis R712]
gi|293386855|ref|ZP_06631425.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis S613]
gi|307285507|ref|ZP_07565646.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0860]
gi|312908008|ref|ZP_07766991.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 512]
gi|312978464|ref|ZP_07790202.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 516]
gi|422729370|ref|ZP_16785771.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0012]
gi|424757827|ref|ZP_18185555.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis R508]
gi|255967871|gb|EET98493.1| extracellular solute-binding protein [Enterococcus faecalis T2]
gi|256951592|gb|EEU68224.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
gi|291078522|gb|EFE15886.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis R712]
gi|291083689|gb|EFE20652.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis S613]
gi|306502731|gb|EFM71996.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0860]
gi|310626099|gb|EFQ09382.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 512]
gi|311288613|gb|EFQ67169.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 516]
gi|315149971|gb|EFT93987.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0012]
gi|402406292|gb|EJV38850.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis R508]
Length = 357
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|398905160|ref|ZP_10652641.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398174878|gb|EJM62659.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 365
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + L I+ W ++ P+ + ++ ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGLDKIDSWDVVFEPQNIKKLHSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKAEAK------LLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA+G+S D+ A R + N+A +PK G +LW D+ AIP
Sbjct: 234 CVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIP 278
>gi|312863574|ref|ZP_07723812.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus vestibularis F0396]
gi|311101110|gb|EFQ59315.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus vestibularis F0396]
Length = 355
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 36/230 (15%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WGT+ I Y +K AP + W DLW PE +I +V+ REVIG
Sbjct: 125 FDPHND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMLVDGAREVIG 179
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G S N+ N+ +L++A K+ S+ N+ A++ ++ +K + I GD +
Sbjct: 180 LSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDE---------MKGYMIQGDAAI 230
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
V +S + + + ++ VVP G++LW D IP + E + +
Sbjct: 231 GVTFSGEASEMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YA 278
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQDT 314
+I F L+ A E I A+P+ L LP+ + K PS+ T
Sbjct: 279 FINFMLKPENAAQ-NAEYIGYATPNEAAKAL--LPKSITDDKAFYPSEST 325
>gi|257079820|ref|ZP_05574181.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
gi|294779472|ref|ZP_06744868.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis PC1.1]
gi|256987850|gb|EEU75152.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
gi|294453429|gb|EFG21835.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis PC1.1]
Length = 357
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|229544963|ref|ZP_04433688.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX1322]
gi|229309855|gb|EEN75842.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX1322]
Length = 357
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|345298511|ref|YP_004827869.1| family 1 extracellular solute-binding protein [Enterobacter
asburiae LF7a]
gi|345092448|gb|AEN64084.1| extracellular solute-binding protein family 1 [Enterobacter
asburiae LF7a]
Length = 370
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 28/240 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
Y W T I + K K L P ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGFNVDKV-KAALGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVL 191
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ D
Sbjct: 192 NYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGD 247
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
V A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 248 VWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307
>gi|357417210|ref|YP_004930230.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
gi|355334788|gb|AER56189.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
Length = 381
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y K + N W +++PE + ++ +++
Sbjct: 136 DP-GNRYAVPYMWGTTGIGYNVDKVKAAFGNTDVANSWDLVFKPENLAKLKDCGVTFLDT 194
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E++ L Y+G NS D +V ++ + + +Q F S+ Y+ A GD
Sbjct: 195 PSEIVPIALNYLGEDPNS--TDPKVIDKAAALLKTIRPSISQ---FHSSSYIDAMANGDT 249
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
+ VGWS DV+ A R +A +PK GA LW D+ AIP +R
Sbjct: 250 CLVVGWSGDVIQARDRAEEAGNGVKIAYSIPKEGAPLWFDMLAIPKDAR 298
>gi|307270639|ref|ZP_07551930.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4248]
gi|307287531|ref|ZP_07567574.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0109]
gi|397700780|ref|YP_006538568.1| spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis D32]
gi|422693944|ref|ZP_16751949.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4244]
gi|422703511|ref|ZP_16761331.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1302]
gi|306501269|gb|EFM70572.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0109]
gi|306512949|gb|EFM81590.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4248]
gi|315148619|gb|EFT92635.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4244]
gi|315164929|gb|EFU08946.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1302]
gi|397337419|gb|AFO45091.1| spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis D32]
Length = 357
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|229593214|ref|YP_002875333.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens SBW25]
gi|229365080|emb|CAY53278.1| putrescine ABC transport system, substrate-binding periplasmic
protein precursor [Pseudomonas fluorescens SBW25]
Length = 364
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K ++ + I+ W L+ PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS N D + A K L + F S+ Y+ G++
Sbjct: 179 DEMLPAVLNYMGLDPNSTNPEDYKKAEAK------LLKVRPYVTYFHSSKYISDLANGNI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 233 CVAAGFSGDVFQAKARAAEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|334706307|ref|ZP_08522173.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas caviae
Ae398]
Length = 359
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVN 144
++DP G +A PY WGT I Y K ++ + I+ W ++ PE ++S ++
Sbjct: 113 KVDP-GHQYAVPYLWGTNGIGYNVDKIKEVLGVDKIDSWATIFEPENMKKLSHCGVAFLD 171
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E+I + L Y+G + NS+ D++ A ++ L + F S+ Y+ G
Sbjct: 172 SADEMIPAALNYLGLNPNSHEPADIKRA------EEQLLKVRPYVAYFHSSKYIGDLANG 225
Query: 204 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
++ VA G+S D+L A R +A +PK G +LW D+ AIPA
Sbjct: 226 NICVAAGFSGDILQAASRAEEAGKGIKIAYSIPKEGGNLWFDMMAIPA 273
>gi|388470108|ref|ZP_10144317.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
synxantha BG33R]
gi|388006805|gb|EIK68071.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
synxantha BG33R]
Length = 366
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y +K + AP++ W +++ E R ++M+++
Sbjct: 121 DP-GNRFAVPYLWGTTGIGYDVAKVHALLGDNAPVDSWDLIFKEENLARLGECGVAMLDA 179
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+I L Y+G YNS N D + Q L L R FDS+ ++ GD+
Sbjct: 180 PAEIIPIALHYLGLPYNSQNPD-----DYVKAQALLLKLRPHIRYFDSSRFITDLANGDI 234
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 239
VGW+ V+ A K + +PK GA +W +
Sbjct: 235 CAVVGWAGGVMDARKAADAAGNGRRIQYSIPKEGAPIWVE 274
>gi|326797025|ref|YP_004314845.1| extracellular solute-binding protein [Marinomonas mediterranea
MMB-1]
gi|326547789|gb|ADZ93009.1| extracellular solute-binding protein family 1 [Marinomonas
mediterranea MMB-1]
Length = 373
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNS 145
DP G PY WG+ I Y K ++ + AP++ W +++ E ++ ++S
Sbjct: 125 DP-GNEHGVPYMWGSTGIGYNVDKVKEVLGDDAPVDSWDLVFKAENMKKLQSCGVMFLDS 183
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ L Y+G N N+ D + + L + R F S+ Y+ A G++
Sbjct: 184 PDELYPLALNYVGK--NPNSHDRKDYSTDSEAAKVLKSVRPYVRQFHSSQYISALANGEI 241
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VA+GWS DV+ A R S N+ +PK G +W D+ AIP ++
Sbjct: 242 CVAIGWSGDVIQAQDRASEAENGVNIEYSIPKEGTQIWFDMLAIPKGAK 290
>gi|440225582|ref|YP_007332673.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
gi|440037093|gb|AGB70127.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
Length = 365
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 27/195 (13%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK---HNLAPIEDWKDLW 132
+S+ W +R DP G +A Y WGT + Y K ++ + AP D ++
Sbjct: 106 ISNMWDTVQKR--IATYDP-GNQYAIDYMWGTSGVGYNVDKVKQILGTDDAP--DINVIF 160
Query: 133 RPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLAN 186
P+LA + I +++SP +VI + L+Y+G NS D + A + L +
Sbjct: 161 DPKLAAKFKDCGIYVLDSPTDVIPAALRYLGLDPNSTKQEDFKKA------EDLLTAIRP 214
Query: 187 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 240
R F S+ Y+ A GD+ +A G+S DVL A R + N+A +P GA +W D+
Sbjct: 215 FVRKFHSSEYINALANGDICLAFGYSGDVLQARNRAAEAKNGVNIAYSIPTKGAQMWFDV 274
Query: 241 WAIPA-ASRLETKQI 254
AIPA A +E I
Sbjct: 275 MAIPADAPHVEEAHI 289
>gi|304440193|ref|ZP_07400083.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371242|gb|EFM24858.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 353
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 100/244 (40%), Gaps = 37/244 (15%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
+ PY GTM I Y K+ + P WKDLW PE +I M NS R+ I LK +G
Sbjct: 128 YTVPYFSGTMGIVYNKTMVK----TPPTSWKDLWNPEYKRQIIMYNSQRDSIAIALKMLG 183
Query: 159 ASYNS-NNIDLQVAGGKISVQQNL--ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S NS + +LQ A + Q+ L A L + R GD + +S D
Sbjct: 184 YSMNSVDPFELQEAKEALIEQKPLVYAYLTDDGR--------DVMVQGDGAIMPMYSGDA 235
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK GA++W D IP + K + G H++I + L+
Sbjct: 236 AYMISENKDLDYVIPKEGANIWMDSMCIPK----DAKNVDGA--------HEFINYLLRK 283
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
+ + SP ++ LPEEL K V P L E+ + L
Sbjct: 284 DVGILNADYCMGYTSP--IKGVKEGLPEELRNSK--------VAYPDYNHLPPLEYFKDL 333
Query: 336 SEAT 339
E +
Sbjct: 334 GENS 337
>gi|381352990|pdb|3TTN|A Chain A, Crystal Structures Of Polyamine Receptors Spud And Spue
From Pseudomonas Aeruginosa
gi|381352991|pdb|3TTN|B Chain B, Crystal Structures Of Polyamine Receptors Spud And Spue
From Pseudomonas Aeruginosa
Length = 340
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 38/254 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 144
E+ G +A PY WGT I Y +K ++ PI+ W L+ PE + ++ +
Sbjct: 96 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENXKKLAKCGVAFXD 155
Query: 145 SPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S E + + L Y+G N+++ D + A ++ L + F S+ Y+ G
Sbjct: 156 SGDEXLPAALNYLGLDPNTHDPKDYKKA------EEVLTKVRPYVSYFHSSKYISDLANG 209
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGR 257
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 210 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLXAIPADAKAADNA---- 265
Query: 258 VRGPSPLIHQWIEFCLQTARALPFKQEV-----IPGASPSALETTLVKLPEELLKGKPSQ 312
+ +I++ L+ V IPGA P L V EE+ +
Sbjct: 266 --------YAFIDYLLRPEVIAKVSDYVGYANAIPGARP--LXDKSVSDSEEVYPPQAVL 315
Query: 313 DTNLIVGVPPAEIL 326
D + V PA++L
Sbjct: 316 DKLYVSAVLPAKVL 329
>gi|452750134|ref|ZP_21949886.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
gi|452005784|gb|EMD98064.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
Length = 365
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G ++ PY WGT+ I Y K + AP++ W +++PE + +S ++S
Sbjct: 120 DP-GNQYSIPYMWGTIGIGYNVDKVKAVLGENAPVDSWDLVFKPENIEKLKSCGVSFLDS 178
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E++ + L Y+G + +S D ++ +Q + F S+ Y+ G+
Sbjct: 179 PTEILPAALHYLGYAPDSGKADELKKAEELFMQ-----IRPHVAYFHSSKYISDLANGES 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQ-IGGR 257
VA+G+S D+ A R NV +PK GA + D+ A+PA A +++
Sbjct: 234 CVAIGYSGDIYQAKARAEEAGNGVNVGYKIPKEGAGSFFDMLAVPADAKNVDSAHAFINY 293
Query: 258 VRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 292
+ P + I +++F A A P E I PG PS
Sbjct: 294 LMKPEVMASITDYVQFPNGNAAATPLVDEAIRTDPGIYPS 333
>gi|398381287|ref|ZP_10539397.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
gi|397719592|gb|EJK80159.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
Length = 365
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 26/192 (13%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK---HNLAPI 125
D+ +S+ W +R DP G +A Y WGT + Y K ++ + AP
Sbjct: 99 DKSKLPNISNMWDTVQQR--IAAYDP-GNQYAVDYMWGTSGVGYNVDKVKQILGTDEAP- 154
Query: 126 EDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQ 179
D ++ P LA + I +++SP +VI + L+Y+G NS D + A ++
Sbjct: 155 -DINVIFDPALAAKFKDCGIYVLDSPTDVIPAALRYLGLDPNSTKPEDFKKA------EE 207
Query: 180 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 233
L + R F S+ Y+ A GD+ + G+S DVL A R + N++ +PK G
Sbjct: 208 LLTAVRPNIRKFHSSEYINALANGDICLTFGYSGDVLQARNRAAEAKNGINISYSIPKKG 267
Query: 234 ASLWADLWAIPA 245
A +W D+ AIPA
Sbjct: 268 AQMWFDVMAIPA 279
>gi|411011631|ref|ZP_11387960.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas
aquariorum AAK1]
gi|423198744|ref|ZP_17185327.1| hypothetical protein HMPREF1171_03359 [Aeromonas hydrophila SSU]
gi|404629934|gb|EKB26659.1| hypothetical protein HMPREF1171_03359 [Aeromonas hydrophila SSU]
Length = 359
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++L+ IK + + D L++ V L++ D ++DP G +A P
Sbjct: 71 DLVVPSNNFLAKQIKAGAFQKL----DPALLPNLANLDPVLLKQLD--KVDP-GHQYAVP 123
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W ++ PE ++S ++S E+I + L Y
Sbjct: 124 YLWGTNGIGYNVEKVKAVLGVDKIDSWATIFEPENMKKLSHCGVAFLDSADEMIPAALNY 183
Query: 157 MGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
+G NS+ DL+ A ++ L + F S+ Y+ G++ VA G+S D+
Sbjct: 184 LGLDPNSHEPADLKRA------EEQLLKVRPYVAYFHSSKYIGDLANGNICVAAGFSGDI 237
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
L A R +A +PK G +LW D+ AIPA
Sbjct: 238 LQAAARAEEAGKGIKIAYSIPKEGGNLWFDMMAIPA 273
>gi|359781089|ref|ZP_09284314.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
gi|359371149|gb|EHK71715.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
Length = 366
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 22/172 (12%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMV 143
E++ G + PY +GT++I + +K + AP++ W +++PE + ++M+
Sbjct: 118 EVNDPGNQYGVPYMYGTILIGFNPAKVKAALGADAPVDSWDLVFKPENMAKLKSCGVAML 177
Query: 144 NSPREVIGSVLKYMGASYNSNNI-DLQVAGG-KISVQQNLALLANQARLFDSTHYLKAFG 201
+SP +++ VL Y+G NS N D + A + ++ +A F+ST Y+
Sbjct: 178 DSPSDILPVVLHYLGLDPNSANAKDYEKATALMLKIRPYMAY-------FNSTKYMTDIA 230
Query: 202 IGDVWVAVGWSSDVLP---AVKRMSNVAVV---VPKSGASLWADLWAIPAAS 247
GD+ VAVG+S K N VV +P+ GA +W D WAIPA++
Sbjct: 231 NGDICVAVGYSGSFYQFGNRAKEAGNGVVVDWRLPREGAPIWFDTWAIPASA 282
>gi|114048491|ref|YP_739041.1| extracellular solute-binding protein [Shewanella sp. MR-7]
gi|113889933|gb|ABI43984.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-7]
Length = 387
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 50/300 (16%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ IK +P+ A+ + FK L+ L + D G +A P
Sbjct: 98 DIVVPSNHFLAKQIKAGAFKPLDRAKLSN-FKNLNADLMKQLEKADPG------NQYAVP 150
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLK 155
Y WGT I Y K + AP + + ++ P+ A +IS M++S +++ +
Sbjct: 151 YLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKISKCGFAMLDSADDMVPQAMI 210
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS + G++ L + F S+ Y+ GD+ VA G+S DV
Sbjct: 211 YLGLDPNSTKAEDYEKAGEL-----LEKIRPYVTYFHSSRYISDLANGDICVAFGFSGDV 265
Query: 216 LPAVKRM------SNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQW 268
A R + + +PK GA+LW D+ AIPA A+ +E H+
Sbjct: 266 FQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAANVENA-------------HKL 312
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I + L+ P V A+P+ LV +E ++ P+ PP E+L +
Sbjct: 313 INYLLRPEVIAPISNYV-AYANPNDPAQPLV---DEAIRNDPAI-------YPPKEVLDK 361
>gi|289672275|ref|ZP_06493165.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. syringae FF5]
gi|422633838|ref|ZP_16698957.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|422668304|ref|ZP_16728162.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440724022|ref|ZP_20904372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34876]
gi|440728705|ref|ZP_20908910.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34881]
gi|330944393|gb|EGH46414.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330980671|gb|EGH78774.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440358665|gb|ELP96011.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34876]
gi|440360838|gb|ELP98093.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34881]
Length = 364
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LLAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|424069748|ref|ZP_17807192.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|424074540|ref|ZP_17811948.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407994030|gb|EKG34642.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407994062|gb|EKG34667.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 364
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LLAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|312902419|ref|ZP_07761625.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0635]
gi|310634089|gb|EFQ17372.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0635]
Length = 357
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNK-FSVPYFWGTLGIIYN-DKFI--DGRQIQHWHDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|256963762|ref|ZP_05567933.1| extracellular solute-binding protein [Enterococcus faecalis
HIP11704]
gi|257416832|ref|ZP_05593826.1| extracellular solute-binding protein [Enterococcus faecalis
ARO1/DG]
gi|307271709|ref|ZP_07552980.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0855]
gi|256954258|gb|EEU70890.1| extracellular solute-binding protein [Enterococcus faecalis
HIP11704]
gi|257158660|gb|EEU88620.1| extracellular solute-binding protein [Enterococcus faecalis
ARO1/DG]
gi|306511587|gb|EFM80586.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0855]
Length = 357
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNK-FSVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|94987274|ref|YP_595207.1| spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis PHE/MN1-00]
gi|94731523|emb|CAJ54886.1| Spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis PHE/MN1-00]
Length = 350
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WG + + + K + + I + DL RPE GR+ + + R+ G
Sbjct: 121 FDPHND-YSIPYMWGALGLLFNK---KVVDPTVITSFNDLNRPEFKGRVLLSDDMRDTFG 176
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
LK G S N+ N D ++ G +QQ L + R+FD T +AF +V + W
Sbjct: 177 VALKVRGYSVNTTNPD-EIKAGYEWLQQ----LKPEIRVFDITATKQAFIGEEVLAGISW 231
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 243
+ D A+K N+ + PK G LW D ++I
Sbjct: 232 NGDAFIAMKENPNLQFIFPKEGFILWIDNFSI 263
>gi|443641720|ref|ZP_21125570.1| Sperimdine/putrescine ABC-type transport system, substrate-binding
protein [Pseudomonas syringae pv. syringae B64]
gi|443281737|gb|ELS40742.1| Sperimdine/putrescine ABC-type transport system, substrate-binding
protein [Pseudomonas syringae pv. syringae B64]
Length = 364
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LLAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|376297850|ref|YP_005169080.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323460412|gb|EGB16277.1| extracellular solute-binding protein family 1 [Desulfovibrio
desulfuricans ND132]
Length = 344
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 111/254 (43%), Gaps = 34/254 (13%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WG+ IA + + + + DLW+PE+ R+ + N PREV
Sbjct: 114 FDPD-NTFSVPYMWGSTAIAVNTGTLGE---SAVTSYADLWKPEMKDRLLLPNDPREVFA 169
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
LK +G S N D A K + ++ L L R+FDS +A G+V V V W
Sbjct: 170 IALKSLGYSLN----DTDPAHLKQAYEK-LKGLMPYVRVFDSDSPKQALLSGEVAVGVIW 224
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF 271
+ + A + + V PK G SLW D IP ++ + H ++ +
Sbjct: 225 NGEAYVANQENPEIKYVYPKEGFSLWMDSLCIPKGAKNLDEA------------HTFLNY 272
Query: 272 CLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
L+ A E + ++P+ + + LP E+ +D ++ P A +R EF
Sbjct: 273 LLRPDVAAAISTE-MGYSTPNEVASEF--LPAEV------RDNPIV--YPDATTASRGEF 321
Query: 332 LEPLSEA--TLSDY 343
+ + EA T DY
Sbjct: 322 QDDIGEAMKTYEDY 335
>gi|374705415|ref|ZP_09712285.1| ABC transporter substrate-binding protein [Pseudomonas sp. S9]
Length = 358
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 32/249 (12%)
Query: 20 GIVNNLSVPFNKVKAKSAPYMAA----DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKC 75
GI N+ V ++ + A MA D+V D +++ IK ++ + ++ +W K
Sbjct: 43 GIGNHYDV-YDSNETLDAKLMAGHSGYDVVFPSDHFMARQIKGGALKILDKSQLPNW-KN 100
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWR 133
L+ L+ ND G + PY WGT I Y K R + P++ W +++
Sbjct: 101 LNPALLKALQTNDPGNQ------YGFPYLWGTTGIGYNVDKVRAVLGDDVPLDSWDIIFK 154
Query: 134 PELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQ 187
PE ++S ++++ E++ L Y+G ++S + D + A + L +
Sbjct: 155 PENMKKLSKCGVAILDNGPELLPIALHYLGLPHHSKDPADYKKA------EALLLQMREN 208
Query: 188 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 241
F S+ Y+ GD+ VAVG+S D+L + R ++ + VVPK GA LW D+
Sbjct: 209 VLYFHSSKYVSDLANGDICVAVGFSGDILQSATRAADANNGVHIDYVVPKEGAPLWFDMV 268
Query: 242 AIPAASRLE 250
A+PA S+ E
Sbjct: 269 AMPADSKNE 277
>gi|256763281|ref|ZP_05503861.1| extracellular solute-binding protein [Enterococcus faecalis T3]
gi|257081834|ref|ZP_05576195.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
gi|257087625|ref|ZP_05581986.1| extracellular solute-binding protein [Enterococcus faecalis D6]
gi|257090787|ref|ZP_05585148.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
gi|422687689|ref|ZP_16745860.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0630]
gi|424672163|ref|ZP_18109144.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis 599]
gi|256684532|gb|EEU24227.1| extracellular solute-binding protein [Enterococcus faecalis T3]
gi|256989864|gb|EEU77166.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
gi|256995655|gb|EEU82957.1| extracellular solute-binding protein [Enterococcus faecalis D6]
gi|256999599|gb|EEU86119.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
gi|315579171|gb|EFU91362.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0630]
gi|402357208|gb|EJU91922.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis 599]
Length = 357
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNK-FSVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|261339163|ref|ZP_05967021.1| hypothetical protein ENTCAN_05386 [Enterobacter cancerogenus ATCC
35316]
gi|288319007|gb|EFC57945.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Enterobacter cancerogenus ATCC 35316]
Length = 370
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLSNWKNLDPEVLKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAVLGKDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAH 307
>gi|313889189|ref|ZP_07822843.1| ABC transporter, solute-binding protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312844743|gb|EFR32150.1| ABC transporter, solute-binding protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 289
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP K ++ PY WGT+ I + K++ + ++ W LW + +I M NS R+ +G
Sbjct: 121 FDPENK-YSVPYFWGTVGIVFNKAEVKDK----VDSWDILWNEKYKNQIIMYNSQRDTLG 175
Query: 152 SVLKYMGASYNSNN-IDLQVAGGKISVQQNL--ALLANQARLFDSTHYLKAFGIGDVWVA 208
LK +G S NS N +LQ A + Q+ L A L + R GD ++
Sbjct: 176 VALKRLGYSLNSTNEKELQEAKKSLIEQKPLVYAYLDDDGR--------DVVVQGDANLS 227
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
V +S D L +++ ++ VVPK G+++W D IP ++ V G I+
Sbjct: 228 VMYSGDALLMMQQNEDLDYVVPKEGSNIWYDSMVIPKNAQ--------NVEGAEKFINYM 279
Query: 269 IEFCLQTARA 278
+E +Q +
Sbjct: 280 LEKEVQAKKC 289
>gi|398863959|ref|ZP_10619500.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398246009|gb|EJN31510.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 368
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 32/201 (15%)
Query: 87 NDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----I 140
+D DP G ++APY WG+ I Y K ++ API ++ P++ R +
Sbjct: 118 HDLQGFDP-GPTYSAPYTWGSNGITYNVDKIKERMPDAPIGSLAMIFDPKIVSRFADCGV 176
Query: 141 SMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKA 199
++V++P EVI LKY+G S DL+ A Q+ L + R FDS +YL +
Sbjct: 177 TLVDAPTEVIPLALKYLGRDPRSAKPEDLKAA------QELLLSVRPYIRKFDSVNYLTS 230
Query: 200 FGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQ 253
GDV +A+ WS D A+ R N++ +PK G+ +W D IPA +
Sbjct: 231 LPNGDVCMAMTWSGDYATAMARAEEAKLNINLSYFIPKEGSLIWFDNMYIPA----DAPH 286
Query: 254 IGGRVRGPSPLIHQWIEFCLQ 274
+ H+++E+ +Q
Sbjct: 287 VANA--------HKFLEYLMQ 299
>gi|152989077|ref|YP_001345787.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452878415|ref|ZP_21955626.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
gi|150964235|gb|ABR86260.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452184919|gb|EME11937.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
Length = 365
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 36/253 (14%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVN 144
E+ G +A PY WGT I Y +K ++ PI+ W L+ PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 145 SPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
S E++ + L Y+G N+++ ++ L + F S+ Y+ G+
Sbjct: 178 SGDEMLPAALNYLGLDPNTHD-----PKEYKKAEEVLTKVRPYVSYFHSSKYISDLANGN 232
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRV 258
+ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 233 ICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNA----- 287
Query: 259 RGPSPLIHQWIEFCLQTARALPFKQEV-----IPGASPSALETTLVKLPEELLKGKPSQD 313
+ +I++ L+ V +PGA P L V EE+ + D
Sbjct: 288 -------YAFIDYLLRPEVIAKVSDYVGYANAVPGARP--LMDKSVSDSEEVYPPQAVLD 338
Query: 314 TNLIVGVPPAEIL 326
+ V PA++L
Sbjct: 339 KAYVSAVLPAKVL 351
>gi|442556116|ref|YP_007365941.1| spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis N343]
gi|441493563|gb|AGC50257.1| spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis N343]
Length = 345
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WG + + + K + + I + DL RPE GR+ + + R+ G
Sbjct: 116 FDPHND-YSIPYMWGALGLLFNK---KVVDPTVITSFNDLNRPEFKGRVLLSDDMRDTFG 171
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
LK G S N+ N D ++ G +QQ L + R+FD T +AF +V + W
Sbjct: 172 VALKVRGYSVNTTNPD-EIKAGYEWLQQ----LKPEIRVFDITATKQAFIGEEVLAGISW 226
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 243
+ D A+K N+ + PK G LW D ++I
Sbjct: 227 NGDAFIAMKENPNLQFIFPKEGFILWIDNFSI 258
>gi|422697722|ref|ZP_16755654.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1346]
gi|315173742|gb|EFU17759.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1346]
Length = 357
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPKNK-FSVPYFWGTLGIIYN-DKFI--DGRQIKHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|261821238|ref|YP_003259344.1| putrescine ABC transporter periplasmic-binding protein
[Pectobacterium wasabiae WPP163]
gi|261605251|gb|ACX87737.1| extracellular solute-binding protein family 1 [Pectobacterium
wasabiae WPP163]
Length = 369
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y G NS + S L L R F S+ Y+ GD+
Sbjct: 182 PEEIFATVLNYQGKDPNST----KPGDYSTSATDLLLKLRPSIRYFHSSQYINDLANGDI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VAVGW+ D++ A R N+ +PK GA + D+ AIP ++
Sbjct: 238 CVAVGWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|424923175|ref|ZP_18346536.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304335|gb|EJZ58297.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 363
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVY----LRRNDAGEIDPRGKI 98
D+V +LS I+ +P+ + L + WK + ++R A DP G
Sbjct: 74 DVVVPSSQFLSKQIRAGAYQPLQ--------RGLLNNWKHFDPRLMQRLQAA--DP-GNQ 122
Query: 99 WAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIG 151
+A PY WGT+ I Y + K R P++ W ++ P+ + ++ +++P ++I
Sbjct: 123 YAVPYMWGTVGIGYNEEKVRAVLGKDVPLDSWSMVFDPQNLAKLKNCGVAFLDAPVKIIP 182
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
L Y+G NS D K+ L L F+S+ Y GD+ VA+G+
Sbjct: 183 QALLYLGLDPNSVKPDDYKQASKL-----LMTLRPSVTYFNSSKYTSDLANGDICVAIGY 237
Query: 212 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
S DV+ A R ++ ++PK G +LW D+ AIP
Sbjct: 238 SGDVMQAQTRAREAGKNIDIRYLIPKEGVNLWFDMLAIP 276
>gi|104784200|ref|YP_610698.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas entomophila L48]
gi|95113187|emb|CAK17915.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas entomophila L48]
Length = 364
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + I+ W L+ PE + ++ ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGTDKIDSWAVLFEPENMKKLAKCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS+N D Q A ++ L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSSNPKDYQKA------EEKLLAVRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIP 244
VA G+S DV A K+ +A +PK G +LW D+ AIP
Sbjct: 233 CVAAGFSGDVFQAKARAEEAKKGVKLAYAIPKEGGNLWFDVLAIP 277
>gi|333898570|ref|YP_004472443.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333113835|gb|AEF20349.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 366
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 40/282 (14%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK ++ +P+ ++ +W + K E+ G ++ P
Sbjct: 77 DIVVPSNSFLAKQIKAKVYQPLDKSKLPNWDNLDKNLLKTV-------EVSDPGNKYSFP 129
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WGT+ I + K + AP++ W L++PE + +S ++SP E++ ++
Sbjct: 130 YMWGTVGIGFNPEKVKAALGENAPVDSWDLLFKPENIEKLKSCGVSFLDSPTEILPIAMQ 189
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G Y + D + +++ AL F S+ Y+ G++ VAVG+S
Sbjct: 190 YLG--YEPTSTDPK------QLKEAEALFMKIRPSVTYFHSSKYISDLANGNLCVAVGYS 241
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLETKQ-IGGRVRGPSPL 264
D+ A R V+ +PK GA + D+ AIPA A +E+ + P +
Sbjct: 242 GDIYQAKSRAEEAGGKVKVSYNIPKQGAGAFFDMVAIPADAENVESAHAFLNFLLKPEIM 301
Query: 265 --IHQWIEFCLQTARALPFKQEVI---PGASPSALETTLVKL 301
I + F A+A P E I PG P+ + T+ KL
Sbjct: 302 AEITNEVHFPNGNAKATPLVDEAIRNDPGVYPT--QETMGKL 341
>gi|115524028|ref|YP_780939.1| extracellular solute-binding protein [Rhodopseudomonas palustris
BisA53]
gi|115517975|gb|ABJ05959.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas
palustris BisA53]
Length = 370
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 25/208 (12%)
Query: 53 SFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAY 112
++ +++++ + D+ L+H W+V +R DP G +AA Y WGT I Y
Sbjct: 87 AYFLQRQIAANVFQKLDKTKLPNLAHAWEVVTKR--LAVYDP-GNQYAANYMWGTTGIGY 143
Query: 113 KKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN 164
K + L P ++ W +++PE + I M++S +++ + L Y+G NS
Sbjct: 144 N-VKTIQSILGPGAVVDSWDIVFKPENISKFKDCGIHMLDSADDILPAALNYLGLDPNST 202
Query: 165 N-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 223
D++ A + A + R F S+ YL + G++ + VGWS D++ A R +
Sbjct: 203 KPADIEKAADLV------AAIRPNVRKFHSSEYLNSLATGEICLVVGWSGDIMQARSRAA 256
Query: 224 ------NVAVVVPKSGASLWADLWAIPA 245
+ +PK GA ++ D AIPA
Sbjct: 257 EAKGGVEIGYAIPKQGAQMFFDNLAIPA 284
>gi|312900019|ref|ZP_07759336.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0470]
gi|311292776|gb|EFQ71332.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0470]
Length = 357
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNK-FSVPYFWGTLGIIYN-DKFIDGR--QIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|251794433|ref|YP_003009164.1| extracellular solute-binding protein [Paenibacillus sp. JDR-2]
gi|247542059|gb|ACS99077.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
JDR-2]
Length = 356
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 116/267 (43%), Gaps = 47/267 (17%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKK--SKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREV 149
DP K ++ PY WGT+ I Y + + H+ W DLW P L +I +++ REV
Sbjct: 126 FDPDNK-YSIPYFWGTVGIVYNPDLTDLKFHS------WNDLWDPSLKNQILLLDGAREV 178
Query: 150 IGSVLKYMGASYNSNNID-LQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVW 206
IG L + S N N + LQ A K+S + N+ A++ ++ +L + +
Sbjct: 179 IGMGLNSLHYSLNDTNEEHLQAAKAKLSTLTPNVKAIVGDEIKLL----------LANEE 228
Query: 207 VAVG--WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL 264
AVG WS D + + VVP+ G++LW D IP + K I G
Sbjct: 229 AAVGLVWSGDASEIMSENEKLDYVVPEEGSNLWFDNMVIPKTA----KNIEGA------- 277
Query: 265 IHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAE 324
H++I F L A E + ++P+A L LPEE+ S D P E
Sbjct: 278 -HKFINFMLDPEHAAQ-NAEYVGYSTPNA--KALEYLPEEI-----SGDKRF---YPDKE 325
Query: 325 ILARCEFLEPLSEATLSDYEWLVADLQ 351
+ + E + L + L Y L + +
Sbjct: 326 LTEKLEVYKNLGKKMLVHYNELFLEFK 352
>gi|422724570|ref|ZP_16781046.1| putative spermidine/putrescine-binding periplasmic protein PotD,
partial [Enterococcus faecalis TX2137]
gi|315025577|gb|EFT37509.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2137]
Length = 367
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y KF + I+ W DLWRPEL + +++ REV+G
Sbjct: 126 FDPQNK-FSVPYFWGTLGIIYN-DKFI--DGRQIQHWDDLWRPELKNNVMLIDGAREVLG 181
Query: 152 SVLKYMGASYNS-NNIDLQVAGGKISVQQN--LALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N+ L+ A K++ N A++A++ +++ + + VA
Sbjct: 182 LSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANE--------ESAVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + ++ ++ V+P G++LW D +P ++
Sbjct: 234 VTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAK 273
>gi|13475456|ref|NP_107020.1| polyamine ABC transporter substrate-binding protein [Mesorhizobium
loti MAFF303099]
gi|14026208|dbj|BAB52806.1| ABC transporter, polyamine transport protein, periplasmic protein
[Mesorhizobium loti MAFF303099]
Length = 365
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 20/182 (10%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRP 134
+S+ W V R + DP G ++ Y WGT+ I Y K + I+ W + P
Sbjct: 106 ISNMWDVISER--TAKYDP-GNEYSVNYMWGTVGIGYNVKKVKAALGTDKIDSWDVFFNP 162
Query: 135 ELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR 189
E + + +++SP ++I + LKY+G NS + D +A + ++ + + R
Sbjct: 163 ESLAKLKDCGVYVLDSPADIIPAALKYVGLDPNSTSPD-DIAKAEEALMKVRPFI----R 217
Query: 190 LFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAI 243
F S+ Y+ A GD+ +A+G+S DV A R + VPK GA +W D AI
Sbjct: 218 KFHSSEYINALANGDICLAIGFSGDVFQARNRAQEAKQGVEIGYSVPKEGAQIWFDQMAI 277
Query: 244 PA 245
PA
Sbjct: 278 PA 279
>gi|398969425|ref|ZP_10682877.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398142127|gb|EJM31031.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 365
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + ++ ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGIDKIDSWSVLFEPENIKKLHSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D A K L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPKDYAKATDK------LLAVRPYVTYFHSSKYIGDLANGDI 233
Query: 206 WVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAAS 247
VA+G+S D+ A K+ +A +PK G +LW D+ AIP S
Sbjct: 234 CVAIGFSGDIFQAKHRAEEAKKGVTIAYSIPKEGGALWFDMLAIPKDS 281
>gi|385871473|gb|AFI89993.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Pectobacterium sp. SCC3193]
Length = 369
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y G NS + S L L R F S+ Y+ GD+
Sbjct: 182 PEEIFATVLNYQGKDPNST----KPGDYSTSATDLLLKLRPSIRYFHSSQYINDLANGDI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VAVGW+ D++ A R N+ +PK GA + D+ AIP ++
Sbjct: 238 CVAVGWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|437834124|ref|ZP_20844892.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435301414|gb|ELO77442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 240
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 102 PYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVL 154
PY W T I Y K + + AP+ W + +PE + +S +++P E+ +VL
Sbjct: 2 PYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVL 61
Query: 155 KYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS+ D G + L L R F S+ Y+ GD VA+GW+ D
Sbjct: 62 NYLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGD 117
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
V A R N++ +PK GA + D++A+PA ++
Sbjct: 118 VWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 157
>gi|288940868|ref|YP_003443108.1| family 1 extracellular solute-binding protein [Allochromatium
vinosum DSM 180]
gi|288896240|gb|ADC62076.1| extracellular solute-binding protein family 1 [Allochromatium
vinosum DSM 180]
Length = 368
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 90 GEIDPRGKIWAAPYRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGR-----ISM 142
+IDP G PY WGT I K R P++ W ++ PE A + IS+
Sbjct: 120 AKIDP-GNAHLLPYLWGTTGIGLNPDKVRAALGEDTPLDTWALIFDPEKASKLAGCGISL 178
Query: 143 VNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
++ P EV + L Y+G NS DL+ A I + R F S+ Y+
Sbjct: 179 LDDPTEVFAAALVYLGKDPNSQAPEDLEAAAELIKA------VRPHIRYFHSSQYISDLA 232
Query: 202 IGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
G VA G+S DVL A +R VA +P+ GA LW D+ AIP
Sbjct: 233 NGATCVAHGYSGDVLQARERAEEAGKGVTVAYRIPREGAVLWTDVMAIP 281
>gi|148547784|ref|YP_001267886.1| extracellular solute-binding protein [Pseudomonas putida F1]
gi|395449383|ref|YP_006389636.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|421521263|ref|ZP_15967922.1| extracellular solute-binding protein [Pseudomonas putida LS46]
gi|148511842|gb|ABQ78702.1| extracellular solute-binding protein, family 1 [Pseudomonas putida
F1]
gi|388563380|gb|AFK72521.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|402755203|gb|EJX15678.1| extracellular solute-binding protein [Pseudomonas putida LS46]
Length = 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E+ +VL Y+G S + G + L L F S+ Y+ GDV
Sbjct: 177 DELFPAVLNYLGMDPRS-----EKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVC 231
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
VA G+S DV A R VA +PK G++LW DL AIP
Sbjct: 232 VAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|399519022|ref|ZP_10759830.1| Putrescine transporter periplasmic protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112846|emb|CCH36388.1| Putrescine transporter periplasmic protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 365
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G ++ PY WGT+ I Y K + + AP++ W +++PE + +S ++S
Sbjct: 120 DP-GNQYSIPYMWGTIGIGYNVEKVKAVLGDNAPVDSWDLVFKPENIEKLKSCGVSFLDS 178
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGD 204
P E++ + L Y+G + +S D ++ + L L + F S+ Y+ G+
Sbjct: 179 PTEILPAALHYLGYAPDSGKAD------ELKKAEELFLSIRPSVTYFHSSKYISDLANGN 232
Query: 205 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG-G 256
+ VA+G+S D+ + R V +PK GA + D+ A+PA A +E +
Sbjct: 233 ICVAIGYSGDIYQSKARAEEAKNGVEVGYNIPKEGAGSFFDMLAVPADAKNVEAAHVFLN 292
Query: 257 RVRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 292
+ P + I +++F A A P E + PG PS
Sbjct: 293 YLMKPEVMASITNYVQFPNANAAATPLVDEALRTDPGVYPS 333
>gi|397693845|ref|YP_006531725.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|397330575|gb|AFO46934.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
Length = 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E+ +VL Y+G S + G + L L F S+ Y+ GDV
Sbjct: 177 DELFPAVLNYLGMDPRS-----EKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVC 231
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
VA G+S DV A R VA +PK G++LW DL AIP
Sbjct: 232 VAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|422608005|ref|ZP_16679996.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330891638|gb|EGH24299.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
Length = 364
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LMAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVR 259
VA G+S DV A R +A +PK G +LW D+ AIPA S+ ++
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK--------NIK 284
Query: 260 GPSPLIHQWIE 270
S I+ +E
Sbjct: 285 AASAFINYMLE 295
>gi|409422830|ref|ZP_11259910.1| periplasmic putrescine-binding protein [Pseudomonas sp. HYS]
Length = 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 85/182 (46%), Gaps = 27/182 (14%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR--- 139
L+ NDA + PY WGT I Y K ++ + ++ W ++ PE +
Sbjct: 114 LQENDADNQH------SVPYLWGTNGIGYNVDKVKQVLGVDHVDSWAVMFEPENLKKLSQ 167
Query: 140 --ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHY 196
+S ++S E+ ++L YMG SNN D + A K L L F S+ Y
Sbjct: 168 CGVSFMDSADELFPAILNYMGMDPRSNNPEDYKKAEAK------LLTLRPYITYFHSSKY 221
Query: 197 LKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASR 248
+ GD+ VA G+S DV A R N+A +PK G++LW DL AIP A++R
Sbjct: 222 VSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPSDASNR 281
Query: 249 LE 250
E
Sbjct: 282 KE 283
>gi|408482246|ref|ZP_11188465.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. R81]
Length = 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 73 FKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDL 131
FK L K L +ND G + PY WGT I Y K ++ + I+ W L
Sbjct: 103 FKNLDPKLLKLLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKEVLGIDAIDSWAVL 156
Query: 132 WRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLA 185
+ PE + ++ ++S E+ ++L YMG S N D + A K L L
Sbjct: 157 FEPENIKKLNQCGVAFLDSADELFPAILNYMGKDPRSENPEDYKQAEAK------LLTLR 210
Query: 186 NQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWAD 239
F S+ Y+ G++ VA G+S DV A R +A +PK G++LW D
Sbjct: 211 PYITYFHSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFD 270
Query: 240 LWAIPA 245
L AIPA
Sbjct: 271 LLAIPA 276
>gi|384919869|ref|ZP_10019899.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
gi|384466255|gb|EIE50770.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
Length = 361
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWR 133
+ + W V R + DP G +A Y WGT + K ++ + AP+ W +++
Sbjct: 101 IDNMWDVISDR--TSKYDP-GNEYAINYMWGTTGLGVNLPKVKEILGDDAPVTSWDLVFK 157
Query: 134 PELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA 188
PE +++ +++P E+I + L Y+G +S++ D+ + + + +
Sbjct: 158 PENMEKLADCGVMFLDAPAEMIPAALNYIGEDPDSHDPDVIAKAEAVYMP-----IRDHI 212
Query: 189 RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWA 242
+ F+S+ Y+ A GD+ VAVGWS DVL A R + +A P GA +W D A
Sbjct: 213 QKFNSSEYVNALANGDICVAVGWSGDVLQARDRAAEAGNGVEIAYYAPDEGAQMWFDEMA 272
Query: 243 IPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQ 274
IP V P+P H+++ F +
Sbjct: 273 IP-------------VDAPNPEAAHRFLNFIMD 292
>gi|261418972|ref|YP_003252654.1| extracellular solute-binding protein [Geobacillus sp. Y412MC61]
gi|297531063|ref|YP_003672338.1| family 1 extracellular solute-binding protein [Geobacillus sp.
C56-T3]
gi|319765789|ref|YP_004131290.1| extracellular solute-binding protein [Geobacillus sp. Y412MC52]
gi|261375429|gb|ACX78172.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC61]
gi|297254315|gb|ADI27761.1| extracellular solute-binding protein family 1 [Geobacillus sp.
C56-T3]
gi|317110655|gb|ADU93147.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC52]
Length = 357
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 34/256 (13%)
Query: 53 SFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAY 112
+AI K + E + D D L + +L DP + ++ PY WGT+ I Y
Sbjct: 91 DYAISKMIEENLLLPLDHDKLPNLQYIEPRFLNL----PFDPHNR-YSVPYFWGTVGIVY 145
Query: 113 KKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVA 171
+ I W DLW P+L +I +V+ REV+G L +G S N +N LQ A
Sbjct: 146 NRDMLGGKT---ITSWNDLWNPDLRNQILLVDGAREVMGMALNSLGYSLNDTNKAHLQEA 202
Query: 172 GGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 229
K+ + N+ A++ ++ +L + + + V WS D + + VV
Sbjct: 203 KRKLDRLMPNVKAIVGDEIKLLLANE--------EAAIGVVWSGDAAEIIAENDKLDYVV 254
Query: 230 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 289
PK G++LW D IP + K I G H +I F L A E + +
Sbjct: 255 PKEGSNLWFDNMVIPKTA----KNIEGA--------HAFINFMLDPKHAAQ-NAEYVGYS 301
Query: 290 SPSALETTLVKLPEEL 305
+P+ + L LP+++
Sbjct: 302 TPN--KKALAYLPKDI 315
>gi|421078994|ref|ZP_15539939.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium wasabiae CFBP 3304]
gi|401706181|gb|EJS96359.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium wasabiae CFBP 3304]
Length = 369
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP K +A PY W T I Y K + AP++ W + +PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E+ +VL Y G NS + S L L R F S+ Y+ GD+
Sbjct: 182 PEEIFATVLNYQGKDPNST----KPGDYSTSATDLLLKLRPSIRYFHSSQYINDLANGDI 237
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
VAVGW+ D++ A R N+ +PK GA + D+ AIP ++
Sbjct: 238 CVAVGWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|385333806|ref|YP_005887757.1| spermidine/putrescine ABC transporter substrate-binding protein
[Marinobacter adhaerens HP15]
gi|311696956|gb|ADP99829.1| spermidine/putrescine ABC transporter periplasmic substrate-binding
protein [Marinobacter adhaerens HP15]
Length = 346
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 103/253 (40%), Gaps = 32/253 (12%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVI 150
+IDP + ++ PY WGT +A + P+ W+DLW GR+ + N REV
Sbjct: 115 DIDPENQ-FSVPYLWGTTGLAVDTADIEGE---PVTAWEDLWEDRFDGRVMLTNDMREVF 170
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
L+ +G S NS N D A + LA L R F+S + G+ V +
Sbjct: 171 HVGLRVLGYSGNSTNPDEIEAA-----YEKLAELMPSVRTFNSDAPRMPYLEGEADVGMI 225
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
W+ + + M ++ V P+ G W D + IP + P HQ+I
Sbjct: 226 WNGEAVMGKDTMESLEYVYPEEGIIAWLDSFVIPK-----------NAKNPEA-AHQFIS 273
Query: 271 FCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 330
F LQ + +E I A+P+ L LP+E+ + S P A + E
Sbjct: 274 FVLQPEISALISEE-IGYATPNLAARDL--LPDEVANNRAS--------YPNATDMINAE 322
Query: 331 FLEPLSEATLSDY 343
F + + L Y
Sbjct: 323 FQTDIGDDALQVY 335
>gi|398992247|ref|ZP_10695265.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399014630|ref|ZP_10716917.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398110386|gb|EJM00291.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398133067|gb|EJM22308.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV LS AI+ I+P+ A F + +++ ++ DP G +A
Sbjct: 77 DLVLTAGQHLSRAIESGAIQPLDQAR-VPHFAGVGEEFRQHM-----AVFDP-GNRYAGI 129
Query: 103 YRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKY 156
Y WGT Y++ ++ AP + W L+ P + + +S++N P EV +V+KY
Sbjct: 130 YAWGTTGFGYQEEAIKQRLPEAPTDSWAMLFDPAVVSKFADCGVSLLNDPNEVFAAVMKY 189
Query: 157 MGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
MG N N+ DL++A +Q LA + R FD+ + G+ VA+ W+ +V
Sbjct: 190 MGLDINRQNLDDLKLA------EQQLAKIRPYIRYFDNDLNISDLANGNTCVAMSWNGNV 243
Query: 216 ------LPAVKRMSNVAVVVPKSGASLWADLWAIP 244
A K+ ++ +PK G +W D +P
Sbjct: 244 AIAAGQAEAAKKPFTLSYRIPKEGTLIWFDAMVVP 278
>gi|398960848|ref|ZP_10678347.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398153501|gb|EJM42000.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + ++ IK + + + ++ +W SH+ L+ DA DP G + P
Sbjct: 77 DLVVPSNQFIDTQIKAGVFQKLDKSKLPNW----SHQDPALLKLLDAN--DP-GNQYGVP 129
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y +GT++I + +K + + AP++ W +++PE + ++M++SP E++ L
Sbjct: 130 YMYGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSEILPLALH 189
Query: 156 YMGASYNSNN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
Y+G NS N D + A ++L L + F+S Y+ GD+ VA+G+S
Sbjct: 190 YLGLDPNSQNPADYEKA-------KDLMLKIRPYVTYFNSAKYMTDIANGDICVAIGYSG 242
Query: 214 DVLP---AVKRMSNVAVV---VPKSGASLWADLWAIPAASR 248
K N VV +PK GA +W D +AIP +++
Sbjct: 243 SFYQFGNRAKEAGNGVVVDWRLPKEGAPIWFDTFAIPKSAK 283
>gi|398963475|ref|ZP_10679632.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398149693|gb|EJM38332.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 365
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + +P+ ++ +W K L+ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQPLDKSKLSNW-KNLN---PVLLKNAAASDPD---NAHAFP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I Y K ++ AP W L++PE A + IS ++SP E+I + L
Sbjct: 129 YMWGSIGIGYNPDKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPAALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G Y N+ D K + + AL F S+ Y+ G++ VAVG+S
Sbjct: 189 YLG--YPVNDKD------KAHILEAEALFMKIRPYVAYFHSSKYISDLANGNICVAVGYS 240
Query: 213 SDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP-AASRLETKQIGGRVRGPSPLI 265
DVL A R + +PK GA + D+ AIP A+ ++ + +I
Sbjct: 241 GDVLQAKARAVEAGNKVQIDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDII 300
Query: 266 HQWIE---FCLQTARALPFKQEVI---PGASPS-ALETTLVKLPEE 304
+ + A A P E I PG+ PS A+ TL +P++
Sbjct: 301 AEITNSNGYSNANAAATPLVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|217974349|ref|YP_002359100.1| family 1 extracellular solute-binding protein [Shewanella baltica
OS223]
gi|217499484|gb|ACK47677.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS223]
Length = 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ IK +P+ A+ + FK L+ L + D G +A P
Sbjct: 77 DIVVPSNHFLAKQIKAGAFKPLDRAKLPN-FKNLNPALMKLLEKADPG------NQYAVP 129
Query: 103 YRWGTMVIAYKKSKFRKH--NLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLK 155
Y WGT I Y K + AP + ++ P+ A +IS M++S +++ L
Sbjct: 130 YLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDSADDMVPQALI 189
Query: 156 YMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS N D + AG + L + F S+ Y+ GD+ VA G+S D
Sbjct: 190 YLGLDPNSANPSDYEKAG------ELLEKIRPYVTYFHSSRYISDLANGDICVAFGFSGD 243
Query: 215 VLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 247
V A R + + +PK GA+LW D+ AIPA S
Sbjct: 244 VFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|410697229|gb|AFV76297.1| spermidine/putrescine-binding periplasmic protein [Thermus oshimai
JL-2]
Length = 351
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 42/259 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELA-GRISMVNSPREVIG 151
DP G ++ PY WGT +AY++ P++ + + PE A G +++ RE +G
Sbjct: 123 DP-GLQYSVPYLWGTTGLAYREDLVT----GPVDSYAVFFDPEKAVGPFLLLDEMRETVG 177
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG---IGDVWVA 208
+ LKY+G S N+ + K + LL+ +AR ++A GD V
Sbjct: 178 AALKYLGYSVNATD-------PKALEEAKALLLSAKARSVGFAGGIEALNRLLAGDAAVT 230
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS-PLIHQ 267
+ +S DVL A + + + +PK G +LW D + RGP+ L ++
Sbjct: 231 LAYSGDVLQARQEDARLRYAIPKEGGTLWTDAMVV-------------LKRGPAQDLAYR 277
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILA 327
+I+F L+ A E A+P A L LPEE+ QD V PP E+ +
Sbjct: 278 FIDFLLEPENAAALA-EYTRYATPVAAAIPL--LPEEM-----RQDP---VVFPPEEVRS 326
Query: 328 RCEFLEPLS-EATLSDYEW 345
+ E+L+ L + L D W
Sbjct: 327 KLEYLKDLGPDIALFDQVW 345
>gi|254476380|ref|ZP_05089766.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Ruegeria sp. R11]
gi|214030623|gb|EEB71458.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Ruegeria sp. R11]
Length = 361
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 39/246 (15%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V S+L+ I+ +P+ D+ ++ W+V R DP +++
Sbjct: 72 DVVVPTGSFLARQIQAGAFQPL----DKSKLSNAANMWEVIEDR--TARYDPD-NVYSIN 124
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLK 155
Y WGT I +K ++ + API+ ++ P+ +++ +++P E+I + LK
Sbjct: 125 YMWGTTGIGANLAKVKEVLGDDAPIDSLDLVFNPDNMAKLAECGVYFLDAPDEMIPAALK 184
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS + D+ + L + + F S+ Y+ A GD+ VA GWS D+
Sbjct: 185 YIGEDPNSMDADVVAKAEPV-----LTAVRPHVKKFHSSEYINALANGDICVAFGWSGDI 239
Query: 216 LPAVKRMSN----VAVV--VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQW 268
L A R + V +V PK GA +W D AIP V P+P H++
Sbjct: 240 LQARDRAAEADNGVEIVYNAPKEGALMWFDQMAIP-------------VDAPNPEAAHKF 286
Query: 269 IEFCLQ 274
+ F ++
Sbjct: 287 LNFIME 292
>gi|365969713|ref|YP_004951274.1| putrescine-binding periplasmic protein [Enterobacter cloacae
EcWSU1]
gi|365748626|gb|AEW72853.1| Putrescine-binding periplasmic protein [Enterobacter cloacae
EcWSU1]
Length = 370
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 26/239 (10%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S+L + + +P+ ++ +W K+ + DP K +A P
Sbjct: 80 DLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKH------DPDNK-YAMP 132
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y W T I Y K + ++ W + +PE + +S +++P E+ +VL
Sbjct: 133 YLWATTGIGYNVDKVKAVLGKDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLN 192
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS+ D G + L L R F S+ Y+ GD+ VA+GW+ DV
Sbjct: 193 YLGKDPNSSKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDV 248
Query: 216 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 266
A R NV+ +PK GA + D++A+P A ++ E Q + P + H
Sbjct: 249 WQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAH 307
>gi|347755505|ref|YP_004863069.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Chloracidobacterium thermophilum B]
gi|347588023|gb|AEP12553.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Chloracidobacterium thermophilum B]
Length = 614
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 126/311 (40%), Gaps = 52/311 (16%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRND-AGEIDPRGKIWAA 101
DL+ D I++ L+ PI + +W YL + DP + +
Sbjct: 346 DLIVPSDYMAGVLIRQGLLRPIDRSRLTNWH---------YLDPDFLHAPYDPENR-YTV 395
Query: 102 PYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASY 161
PY + I Y++ K + P+E W LW GRI+M++ RE + L+ GAS
Sbjct: 396 PYTFVVTGIGYRRDKVPE----PVEHWDALWDTRYRGRIAMLDDQRECFAAALRRRGASP 451
Query: 162 NSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 220
NS + ++ A ++ Q+ L + +DS + + G+ W+ G++ + A +
Sbjct: 452 NSQDEQEIARAADDLAAQKPL------VKTYDSATFEQLLLNGEAWLVHGFNGQIAKAAR 505
Query: 221 RMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARAL 279
+ N+A VVP+ G + D AIP V P L Q+I++ L+
Sbjct: 506 QNPNIAFVVPQEGGTRAVDCLAIP-------------VNAAHPELAEQFIDYVLE----- 547
Query: 280 PFKQEVIPGASPSALETTLVKLPEELLKG--KPSQDTNLIVGVPPAEILARCEFLEPLSE 337
P AS ++ T P ++ P N V PP L RC +E +
Sbjct: 548 -------PQASAEIVQVTGYGTPNRAVRDFLPPDWANNPYV-FPPETWLRRCAVIEDVGA 599
Query: 338 AT-LSDYEWLV 347
DY W V
Sbjct: 600 ILPRYDYYWTV 610
>gi|257483767|ref|ZP_05637808.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422596916|ref|ZP_16671194.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|422682743|ref|ZP_16741007.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330987211|gb|EGH85314.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331012081|gb|EGH92137.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 364
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LMAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|283779715|ref|YP_003370470.1| family 1 extracellular solute-binding protein [Pirellula staleyi
DSM 6068]
gi|283438168|gb|ADB16610.1| extracellular solute-binding protein family 1 [Pirellula staleyi
DSM 6068]
Length = 367
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 59/300 (19%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPR------- 95
D+V D + I ++L+EP+ Y R +A +DPR
Sbjct: 100 DVVFPSDRTMDLLISRKLVEPLD-----------------YARLTNASHLDPRFLGHEFD 142
Query: 96 -GKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVL 154
++ PY WGT+ +A + + + D+ L+ P+ RI ++ ++ L
Sbjct: 143 LQNEFSLPYFWGTVAVAIRDDFVSEK----VVDFAPLFDPKYRSRIVALDDAENMVAVAL 198
Query: 155 KYMGASYNSNNID-LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
++G NS + + L++AG + Q L + + S Y + GD WVAVGW+
Sbjct: 199 LHLGLPMNSTDPEHLRLAGKLLKSQVPLV------QAYTSDAYKEKLIAGDAWVAVGWNG 252
Query: 214 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL 273
D+ A ++ V+ G +W D IP+ + + L H+ I F L
Sbjct: 253 DLRQAADEEPHIQVINRAQGTMVWLDSMVIPSGA------------PHAELAHELINFLL 300
Query: 274 QTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLE 333
A A E + SP+ L LP+EL DT + PP +++A+ +L+
Sbjct: 301 DPAIAAR-NAEFVHFGSPNTAARAL--LPDEL-----KNDTAIY---PPDDVIAKSVYLK 349
>gi|389684687|ref|ZP_10176014.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis O6]
gi|388551424|gb|EIM14690.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis O6]
Length = 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + +L IK + + + ++ +W H+ V L+ D+ DP G + P
Sbjct: 77 DLVVPSNQFLDTQIKAGVFQKLDKSKLPNW----QHQDPVLLKLLDSN--DP-GNQYGVP 129
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y +GT++I + +K + + AP++ W +++PE + ++M++SP E++ L
Sbjct: 130 YMYGTVLIGFNPAKVKAALGDKAPVDSWDLVFKPENMEKLKSCGVAMLDSPTEILPLALH 189
Query: 156 YMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS N D + A ++ + + F+S Y+ GD+ VA+G+S
Sbjct: 190 YLGLDPNSQNPQDYEKA------KELMLKIRPYVTYFNSAKYMTDIANGDICVAIGYSGS 243
Query: 215 VLP---AVKRMSNVAVV---VPKSGASLWADLWAIPAASR 248
K N VV +PK GA +W D +AIP +++
Sbjct: 244 FYQFGNRAKEAGNGVVVDWRLPKEGAPIWFDTFAIPKSAK 283
>gi|168185699|ref|ZP_02620334.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
gi|169296261|gb|EDS78394.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
Length = 347
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ + ++ PY WGT+ I Y +K K N I+ W LW P+ +I MV+S R+ I
Sbjct: 120 FDPKNE-YSVPYMWGTVGIIYN-TKLIKDN---IDSWDALWNPKYKEQILMVDSQRDAIA 174
Query: 152 SVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK +G S N+ N L+ A ++ Q+ A + D L G +AV
Sbjct: 175 VALKRLGYSMNTTNKSQLEKAKQELIKQKPFV----HAYVGDEVKDLMTDEEG--AIAVV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
WS D + +K N+ V+PK G++LW D IP ++
Sbjct: 229 WSGDAVTMMKNNKNLKYVIPKEGSNLWFDNMVIPKGTK 266
>gi|146280464|ref|YP_001170617.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|339492153|ref|YP_004712446.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|386018709|ref|YP_005936733.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|145568669|gb|ABP77775.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|327478681|gb|AEA81991.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|338799525|gb|AEJ03357.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 365
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G ++ PY WGT+ I Y K + + AP++ W +++PE + ++ ++S
Sbjct: 120 DP-GNQYSIPYMWGTIGIGYNVDKVKAALGDNAPVDSWDLVFKPENIEKLKSCGVAFLDS 178
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E++ + L Y+G + +S D + +Q + F S+ Y+ G++
Sbjct: 179 PTEMLPAALHYLGYATDSGKADELKKAEDLFMQ-----IRPHVAYFHSSKYISDLANGNI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG-GR 257
VA+G+S D+ R NV +PK GA + D+ A+PA A +E +
Sbjct: 234 CVAIGYSGDIYQGKSRAEEAANGVNVGYKIPKEGAGSFFDMLAVPADAKNVENAHVFLNY 293
Query: 258 VRGPSPL--IHQWIEFCLQTARALPFKQEVI 286
+ P + I +++F A A P E I
Sbjct: 294 LMKPDVMASITNYVQFPNGNAAATPLLDEAI 324
>gi|289626089|ref|ZP_06459043.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289651117|ref|ZP_06482460.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 2250]
gi|422584131|ref|ZP_16659245.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330868952|gb|EGH03661.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 364
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LMAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|422408927|ref|ZP_16485888.1| spermidine/putrescine-binding periplasmic protein 2, partial
[Listeria monocytogenes FSL F2-208]
gi|313609957|gb|EFR85339.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes FSL F2-208]
Length = 312
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ PEL +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N LQ A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPS 292
A E + A+P+
Sbjct: 289 ENA-AINAEYVGYATPN 304
>gi|399002045|ref|ZP_10704741.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398125789|gb|EJM15252.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 365
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + L I+ W ++ P+ + ++ ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVDKIKAVLGLDKIDSWDVVFEPQNIKKLHSCGVAFLDSA 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG + NS N D + A + L + F S+ Y+ GD+
Sbjct: 180 DEMMPTVLNYMGLNANSTNPEDYKKA------EVKLLAVRPYVTYFHSSKYIADLANGDI 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
VA+G+S D+ A R + N+A +PK G +LW D+ AIP
Sbjct: 234 CVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIP 278
>gi|383772683|ref|YP_005451749.1| substrate-binding protein [Bradyrhizobium sp. S23321]
gi|381360807|dbj|BAL77637.1| substrate-binding protein [Bradyrhizobium sp. S23321]
Length = 370
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWR 133
L + W V +R G DP G ++AA Y WGT I Y +K ++ A I+ W +++
Sbjct: 110 LGNAWPVVTQR--LGIYDP-GNVYAANYMWGTTGIGYNVAKLKQILGADARIDSWDIVFK 166
Query: 134 PELAGR-----ISMVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQ 187
PE + + M++S ++ + L ++G NS DL+ A + A +
Sbjct: 167 PENLSKFRDCGVHMLDSADDIFPAALSWLGLDPNSTKQADLEKAADVV------AKVRPS 220
Query: 188 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 241
R F S+ YL A G++ VGWS D++ A R + + +PK GA ++ D
Sbjct: 221 VRKFHSSEYLSALATGEICFVVGWSGDIMQARARAAEAKSGIEIGYTIPKEGAQMFFDNL 280
Query: 242 AIPAASR 248
AIPA ++
Sbjct: 281 AIPADAK 287
>gi|336392100|ref|ZP_08573499.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. torquens KCTC 3535]
Length = 357
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 14/153 (9%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y N + I+ W DLW P+L I +V+S R+++G L G
Sbjct: 132 YSVPYFWGTLGIIYNDQMI---NGSQIQHWNDLWSPKLRNNIMLVDSARDIMGMALISQG 188
Query: 159 ASYNSNNI-DLQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N+ NI +L+ A K+ + N+ A++A++ +++ + + + VAV WS +
Sbjct: 189 HSVNTTNIAELEQAKLKLEGLMPNVKAVVADEIKMYMAQN--------EAAVAVTWSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ S++ VVP G++LW D IP ++
Sbjct: 241 AEMMANNSHLHYVVPTEGSNLWFDNLVIPKTAK 273
>gi|424923630|ref|ZP_18346991.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304790|gb|EJZ58752.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + ++ IK + + + ++ +W SH+ L+ DA DP G + P
Sbjct: 77 DLVVPSNQFIDTQIKAGVFQKLDKSKLPNW----SHQDPALLKLLDAN--DP-GNQYGVP 129
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y +GT++I + +K + + AP++ W +++PE + ++M++SP E++ L
Sbjct: 130 YMYGTVLIGFNPAKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSEILPLALH 189
Query: 156 YMGASYNSNN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSS 213
Y+G NS N D + A ++L L + F+S Y+ GD+ VA+G+S
Sbjct: 190 YLGLDPNSQNPADYEKA-------KDLMLKIRPYVTYFNSAKYMTDIANGDICVAIGYSG 242
Query: 214 DVLP---AVKRMSNVAVV---VPKSGASLWADLWAIPAASR 248
K N VV +PK GA +W D +AIP +++
Sbjct: 243 SFYQFGNRAKEAGNGVVVDWRLPKEGAPIWFDTFAIPKSAK 283
>gi|424880107|ref|ZP_18303739.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392516470|gb|EIW41202.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 365
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 118/275 (42%), Gaps = 47/275 (17%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIE--DWKDLWR 133
L + W V ++ DP G ++ Y WGT I Y K K L E +W L+
Sbjct: 106 LVNMWDVIMKG--VASFDP-GNEYSVDYMWGTTGIGYNVDKV-KAALGTDEKPNWDALFD 161
Query: 134 PELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQ 187
P A + I M++SP +V+ SVL Y+G + NS + DL+ A Q L +
Sbjct: 162 PAKAAKLKDCGIYMLDSPTDVVPSVLAYLGLNPNSTDAADLKKA------QAVLTAVRPF 215
Query: 188 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLW 241
R F S+ Y+ A GD+ +A+G+S D+ A R + V VP GA ++ D++
Sbjct: 216 VRKFHSSEYISALANGDICIALGYSGDMFQARDRAAEANAGVKVDYSVPSQGAQIFFDVF 275
Query: 242 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 301
IP + + H++I + + K EV+ AS K
Sbjct: 276 GIPKDAPHVAEA------------HEFINYMM--------KPEVVAKASNFVFYANGNKA 315
Query: 302 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLS 336
++ L + DT + P E++A+ + PL
Sbjct: 316 SQQFLDKEVLDDTAIY---PTPEVMAKLFTVPPLD 347
>gi|347732884|ref|ZP_08865955.1| potD [Desulfovibrio sp. A2]
gi|347518360|gb|EGY25534.1| potD [Desulfovibrio sp. A2]
Length = 345
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP G ++ PY WG+ + + + + A I W DL RPE AG++ + + R+ +G
Sbjct: 116 FDP-GNEYSVPYMWGSAGLMVNR---KVVDPASITSWNDLNRPEFAGKVILSDDQRDSMG 171
Query: 152 SVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK +G S NS N +++ A + L L R+FD T +AF +V +
Sbjct: 172 VALKALGYSVNSTNEAEIKAA------YEWLKKLLPAVRVFDVTASKQAFISEEVAAGLI 225
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
W+ D A N+ + PK G LW D AIP ++ + H++I+
Sbjct: 226 WNGDAYIAASENKNLVYIYPKEGVPLWVDSLAIPVGAKHKENA------------HKFID 273
Query: 271 FCLQ 274
F L+
Sbjct: 274 FLLR 277
>gi|308048856|ref|YP_003912422.1| extracellular solute-binding protein [Ferrimonas balearica DSM
9799]
gi|307631046|gb|ADN75348.1| extracellular solute-binding protein family 1 [Ferrimonas balearica
DSM 9799]
Length = 364
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRI----SMVNSP 146
DP G +A PY WGT + Y + + W +++PE+ +I + +N+P
Sbjct: 120 DP-GNQFAVPYLWGTTGLGYNVEAMARIFGEDFEVNSWDLVFKPEMISKIDCGVAFLNAP 178
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E+I + + Y+G NS N D++ A ++ L + F S+ ++ GD+
Sbjct: 179 SEIIPAAMHYLGMDPNSTNPKDVEPA------EELLLKVRPYITYFHSSQFINDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+AVGWS D+L A R + V+P+ G +W DL AIP +R
Sbjct: 233 CLAVGWSGDILQAADRADEADNGITIEYVIPQEGTLVWFDLMAIPRDAR 281
>gi|163790907|ref|ZP_02185331.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
gi|159873860|gb|EDP67940.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
Length = 357
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP + ++ PY WGT+ I Y KF + + I+ W DLW PEL + +++ RE+IG
Sbjct: 126 FDPSNQ-FSIPYFWGTLGIIYN-DKFVEED--AIQHWDDLWNPELKNEVMLIDGAREIIG 181
Query: 152 SVLKYMGASYNSNNID-LQVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVWVA 208
L G S NS D L A K+S + N+ A++A++ +++ + VA
Sbjct: 182 LALDSEGNSLNSKEDDQLAAAAKKLSGLTPNVKAIVADEIKMYMIQE--------EASVA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + + N+ V+P G++LW D + IP ++
Sbjct: 234 VTFSGEASEMLYENENLHYVIPSEGSNLWFDNFVIPKTAK 273
>gi|398921870|ref|ZP_10660034.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398164240|gb|EJM52383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV + ++ IK + + + ++ +W SH+ L+ D DP G + P
Sbjct: 77 DLVVPSNQFIETQIKAGVFQKLDKSKLPNW----SHQDPALLKLLDKN--DP-GNQYGVP 129
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPE-----LAGRISMVNSPREVIGSVLK 155
Y +GT++I + +K + AP++ W +++PE A ++M++SP E++ L
Sbjct: 130 YMYGTVLIGFNPAKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLDSPSEILPLALH 189
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS N D + ++ + F+S Y+ GD+ VA+G+S
Sbjct: 190 YLGLDPNSQNPDDYEKAKALMLK-----VRPYVTYFNSAKYMTDIANGDICVAIGYSGSF 244
Query: 216 LP---AVKRMSNVAVV---VPKSGASLWADLWAIPAASR 248
K N VV +PK GA +W D +AIP ++R
Sbjct: 245 YQFGNRAKEAGNGVVVDWRLPKEGAPIWFDTFAIPKSAR 283
>gi|422620565|ref|ZP_16689242.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. japonica str. M301072]
gi|330900922|gb|EGH32341.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. japonica str. M301072]
Length = 364
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LLAIRPYVTYFHSAKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|390450397|ref|ZP_10235990.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
gi|389662745|gb|EIM74302.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
Length = 365
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIED 127
D+D +S+ W + R DP G + Y WGT + Y K + A ++
Sbjct: 99 DKDKLPNISNMWDMISDR--VAVYDP-GNEHSINYMWGTTGVGYNVGKAEEILGTAKVDT 155
Query: 128 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNL 181
W ++ PELA + I M++S EV+ S L Y+G N+ ++ DL A ++ L
Sbjct: 156 WDVMFTPELAAKFKDCGIYMLDSASEVVRSALIYLGLDPNTPSSDDLAKA------EELL 209
Query: 182 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGAS 235
+ R F S+ Y+ GD+ +A+G+S D+ A R + V +PK GA
Sbjct: 210 LSVRPYVRKFHSSEYINGLANGDICLALGYSGDIFQARDRAAEADQGVTVGYAIPKEGAM 269
Query: 236 LWADLWAIPAASR 248
LW D AIPA ++
Sbjct: 270 LWFDQMAIPADAK 282
>gi|386396044|ref|ZP_10080822.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM1253]
gi|385736670|gb|EIG56866.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM1253]
Length = 368
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 53 SFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAY 112
++ +++++ I D+ L++ W V R DP G ++AA Y WGT I Y
Sbjct: 85 AYFLQRQIKANIFQKLDKSKLPNLANAWPVVTER--LAIYDP-GNVYAANYMWGTTGIGY 141
Query: 113 KKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN- 164
+K ++ A I+ W +++PE + + M++S ++ + L ++G NS
Sbjct: 142 NVAKLKQILGADAKIDSWDIVFKPENLAKFKDCGVHMLDSADDIFPAALSWLGLDPNSTK 201
Query: 165 NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 223
DL+ A + A + R F S+ YL A G++ + VGWS D++ A R +
Sbjct: 202 QADLEKAADVV------AKVRPSVRKFHSSEYLSALATGEICLVVGWSGDIMQARARAAE 255
Query: 224 -----NVAVVVPKSGASLWADLWAIPAASR 248
+ +PK GA ++ D AIPA +R
Sbjct: 256 AKSGIEIGYAIPKEGAQMFFDNLAIPADAR 285
>gi|426410011|ref|YP_007030110.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426268228|gb|AFY20305.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 365
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 131/284 (46%), Gaps = 35/284 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + + + ++ +W ++ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQTLDKSKLPNW----NNLNPVLLKNASASDPD---NAHAIP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + +K ++ AP W L++PE A + IS ++SP E+I + L
Sbjct: 129 YMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPTALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G Y N+ D Q I+ Q L + + F S+ Y+ G++ VAVG+S D
Sbjct: 189 YLG--YPVNDQDKQ----HIAQAQALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGD 242
Query: 215 VLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL-- 264
VL A R + +PK GA+ + D+ A+P AA+ + P +
Sbjct: 243 VLQAKARAQEAGDKVKIDYSIPKEGAASFYDMLAMPRDAANVENAYLFMNFLMRPDVIAD 302
Query: 265 IHQWIEFCLQTARALPFKQEVI---PGASPS-ALETTLVKLPEE 304
I I + A A P E I PG+ PS A+ L +P++
Sbjct: 303 ITNNIGYSNANAAATPLVDEAIRNEPGSYPSEAVMAKLYAVPDQ 346
>gi|71733632|ref|YP_276985.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554185|gb|AAZ33396.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. phaseolicola 1448A]
Length = 364
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LLAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|254500570|ref|ZP_05112721.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
gi|222436641|gb|EEE43320.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
Length = 359
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 99 WAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIG 151
++ Y WGT + Y K + AP++ W L++PE A + I ++++P E+
Sbjct: 119 YSINYMWGTTGLGYNVEKVKAALGEDAPVDSWDLLFKPENAAKLQECGIHVLDAPTELFP 178
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
+ L Y+G +S + G + L + + F S+ Y+ A GD+ +AVGW
Sbjct: 179 AALNYLGLDPDSKD-----TGDIEKATELLKSVRPYVQKFHSSEYINALANGDICLAVGW 233
Query: 212 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
S DVL A R + V +PK GA +W D AIPA ++
Sbjct: 234 SGDVLQARDRAAEADNGVTVEYAIPKEGALMWFDQMAIPADAK 276
>gi|408416127|ref|YP_006626834.1| polyamine transport protein [Bordetella pertussis 18323]
gi|401778297|emb|CCJ63698.1| putative polyamine transport protein [Bordetella pertussis 18323]
Length = 367
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 25/169 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVN 144
IDP G + P+ +GT + Y +K R+ + +W L++PE A + ISM++
Sbjct: 121 IDP-GNQYVIPWGYGTNGLGYNVTKVRQIMGEGVDLANWDMLFKPENAAKLKECGISMLD 179
Query: 145 SPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFG 201
+V +VLKY+G NS N D ++ LALL R F S+ Y+
Sbjct: 180 EAAQVFPAVLKYLGKDPNSANTD--------DYKEALALLKQIRPYIRQFSSSGYIDELA 231
Query: 202 IGDVWVAVGWSSDVLPAVKR------MSNVAVVVPKSGASLWADLWAIP 244
+GD+ + G+S DV+ A +R + + +PK GA W D+ AIP
Sbjct: 232 VGDLCMVYGFSGDVMIARRRAQEARKLYEINYFIPKGGAPAWFDVMAIP 280
>gi|330501318|ref|YP_004378187.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915604|gb|AEB56435.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 365
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 92 IDPR--GKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISM 142
+DP G ++ PY WGT+ I Y K + AP++ W +++PE + +S
Sbjct: 116 LDPSDPGNQYSVPYMWGTIGIGYNVEKVKAALGEDAPVDSWDLVFKPENMEKLKSCGVSF 175
Query: 143 VNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFG 201
++SP E++ + L Y+G + +S++ G++ + L + + F S+ Y+
Sbjct: 176 LDSPTEILPAALHYLGYAPDSSD------KGELQKAEELFMKIRPSVAYFHSSKYISDLA 229
Query: 202 IGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQI 254
G++ VA+G+S D+ + R V +PK GA + D+ A+PA A +E +
Sbjct: 230 NGNICVAIGYSGDIYQSKARAEEAKNGVEVGYNIPKEGAGSFFDMLAVPADAKNVEAAHV 289
Query: 255 G-GRVRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 292
+ P + I +++F A A P E + PG PS
Sbjct: 290 FLNYLMKPEVMASITNYVQFPNGNAAATPLVDEALRTDPGVYPS 333
>gi|26989866|ref|NP_745291.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
putida KT2440]
gi|24984773|gb|AAN68755.1|AE016507_6 periplasmic polyamine-binding protein, putative [Pseudomonas putida
KT2440]
Length = 362
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E+ +VL Y+G S + G + L L F S+ Y+ GDV
Sbjct: 177 DELFPAVLNYLGMDPRS-----EKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVC 231
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
+A G+S DV A R VA +PK G++LW DL AIP
Sbjct: 232 IAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|410089930|ref|ZP_11286537.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas viridiflava UASWS0038]
gi|409762797|gb|EKN47796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas viridiflava UASWS0038]
Length = 364
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 37/224 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ ++L Y+G NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAMLNYLGLDPNSTKEADYKKAEAK------LMAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR----------- 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSKNVKAASAFINY 292
Query: 249 -LETK---QIGGRV--RGPSPLIHQWIEFCLQTARALPFKQEVI 286
L+ K Q+ V P+P ++++ ++T A+ QEV+
Sbjct: 293 LLDPKVIAQVSDEVGYANPNPASGEFMDQAIRTDEAVYPPQEVL 336
>gi|416022126|ref|ZP_11567366.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|422403034|ref|ZP_16480093.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|320331741|gb|EFW87679.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330872512|gb|EGH06661.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 364
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 147 REVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E++ +VL YMG NS D + A K L + F S+ Y+ GD+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAK------LLAIRPYVTYFHSSKYITDLANGDI 232
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 248
VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 233 CVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|338174752|ref|YP_004651562.1| spermidine/putrescine-binding periplasmic protein [Parachlamydia
acanthamoebae UV-7]
gi|336479110|emb|CCB85708.1| spermidine/putrescine-binding periplasmic protein [Parachlamydia
acanthamoebae UV-7]
Length = 343
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 40/245 (16%)
Query: 100 AAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 159
A PY I Y+ K ++ ++P W+ R +L GR++M+N RE +G+ LK +G
Sbjct: 122 AVPYMVSYTGIGYRIDKVQR--VSPT--WEIFARRDLKGRMTMLNDVREALGAALKSLGY 177
Query: 160 SYNSNNIDLQVAGGK---ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
S NS + D Q+A I+ ++NLA FDS Y + V G+S D++
Sbjct: 178 SLNSTD-DFQIAQAASTLINWKRNLA-------KFDSEQYKNGIASAEYLVVQGYSGDLI 229
Query: 217 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS-PLIHQWIEFCLQT 275
++ +N+ ++ P+ G ++ D IP P L H +I F L+
Sbjct: 230 QVMQEDANIGILYPQEGTAISIDEIIIPK-------------HAPEVQLAHAFINFLLEP 276
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
RA E + SP+ T + ++ P+ + P EIL R E + L
Sbjct: 277 KRAAE-NMEFVFFISPN---TAAAQYLSPKVRNNPALNL-------PNEILQRSEVIHDL 325
Query: 336 SEATL 340
SE +
Sbjct: 326 SENNI 330
>gi|282892024|ref|ZP_06300501.1| hypothetical protein pah_c205o044 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498066|gb|EFB40408.1| hypothetical protein pah_c205o044 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 343
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 40/245 (16%)
Query: 100 AAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA 159
A PY I Y+ K ++ ++P W+ R +L GR++M+N RE +G+ LK +G
Sbjct: 122 AVPYMVSYTGIGYRIDKVQR--VSPT--WEIFARRDLKGRMTMLNDVREALGAALKSLGY 177
Query: 160 SYNSNNIDLQVAGGK---ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
S NS + D Q+A I+ ++NLA FDS Y + V G+S D++
Sbjct: 178 SLNSTD-DFQIAQAASTLINWKRNLA-------KFDSEQYKNGIASAEYLVVQGYSGDLI 229
Query: 217 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS-PLIHQWIEFCLQT 275
++ +N+ ++ P+ G ++ D IP P L H +I F L+
Sbjct: 230 QVMQEDANIGILYPQEGTAISIDEIIIPK-------------HAPEVQLAHAFINFLLEP 276
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
RA E + SP+ T + ++ P+ + P EIL R E + L
Sbjct: 277 KRAAE-NMEFVFFISPN---TAAAQYLSPKVRNNPALNL-------PNEILQRSEVIHDL 325
Query: 336 SEATL 340
SE +
Sbjct: 326 SENNI 330
>gi|114331324|ref|YP_747546.1| extracellular solute-binding protein [Nitrosomonas eutropha C91]
gi|114308338|gb|ABI59581.1| extracellular solute-binding protein, family 1 [Nitrosomonas
eutropha C91]
Length = 369
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 37/197 (18%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPR 147
DP + ++ PY + T +I + + K + NL P + W ++ PE + GRI++++S R
Sbjct: 128 FDPDNR-YSVPYAYTTTLIGFNREKLAELNL-PTDSWAIIFEPEYLKKIKGRITVLDSQR 185
Query: 148 EVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQA---RLFDSTHYLKAFGIGD 204
E++ + LKY+G Y++++ D + QQ AL+ F +T Y++ IG+
Sbjct: 186 ELMAAALKYLG--YSASDTD------ENHWQQAKALIIRAKPYWAAFSNTSYIRELAIGN 237
Query: 205 VWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRV 258
+WVA G+S+D+ A R +V V+P+ GA L D + +
Sbjct: 238 LWVAHGYSNDMYQAALDAKKTGRRFSVDFVIPREGAVLSLDSMVLHHS------------ 285
Query: 259 RGPSP-LIHQWIEFCLQ 274
G P L H++I F L+
Sbjct: 286 -GHRPDLAHRFINFMLE 301
>gi|421600517|ref|ZP_16043511.1| hypothetical protein BCCGELA001_21544 [Bradyrhizobium sp.
CCGE-LA001]
gi|404267373|gb|EJZ32059.1| hypothetical protein BCCGELA001_21544 [Bradyrhizobium sp.
CCGE-LA001]
Length = 350
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAP---IEDWKDLWRPELAGR-----ISMVN 144
DP G +AA Y WGT I Y +K K L P I+ W +++PE + + M++
Sbjct: 105 DP-GNDYAANYMWGTTGIGYNVAKV-KQILGPDAKIDSWDIVFKPENLAKFRDCGVHMLD 162
Query: 145 SPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIG 203
S ++ + L Y+G NS DL+ A + A + R F S+ YL A G
Sbjct: 163 SADDIFPAALNYLGLDPNSTKQADLEKAADAV------AKVRPSVRKFHSSEYLSALATG 216
Query: 204 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
++ VGWS D++ A R + + VPK GA ++ D AIPA ++
Sbjct: 217 EICFVVGWSGDIMQARARAAEAKSGVEIGYAVPKEGAQMFFDNLAIPADAK 267
>gi|417843859|ref|ZP_12489924.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21127]
gi|341948322|gb|EGT74952.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21127]
Length = 350
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNSDEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+ + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NPSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|83855357|ref|ZP_00948887.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. NAS-14.1]
gi|83843200|gb|EAP82367.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. NAS-14.1]
Length = 361
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 69 DQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIE 126
D+D +++ W V R + DP G +A Y WGT + +K ++ AP++
Sbjct: 94 DKDKLPNITNMWDVIEDR--VSKYDP-GNEYAVNYMWGTTGLGVNMTKVKEVLGEDAPVD 150
Query: 127 DWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 181
+++PE +++ +++P E+I + LK++G + + D+ + L
Sbjct: 151 SLDLVFKPENMEKLAECGVHFLDAPTEMIPAALKFLGEDPQTQDPDVIAKAEPV-----L 205
Query: 182 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGAS 235
+A + F S+ Y+ A GD+ VA GWS D+L + R + +A PK GA
Sbjct: 206 TAVAPHVQKFHSSEYINALANGDICVAFGWSGDILQSRDRAAEADNGVEIAYYAPKEGAL 265
Query: 236 LWADLWAIPA 245
+W D AIPA
Sbjct: 266 MWFDNMAIPA 275
>gi|421505530|ref|ZP_15952468.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|400343939|gb|EJO92311.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 363
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 24/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L I+ +P+ A+ +W L L ND G ++ P
Sbjct: 75 DVVVPSNHFLGKQIRAGAFQPLDRAKLPNW-DNLDQALLKQLETNDPG------NQYSVP 127
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W L+ E ++S ++S E+I ++L Y
Sbjct: 128 YLWGTNGIGYNMEKIKAVLGVEEIDSWAVLFEAENIKKLSQCGVAFLDSADEMIPAMLNY 187
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
+G NS N D + L + F S+ Y+ G++ VA G+S D+L
Sbjct: 188 LGLDPNSTNPD-----DYAKAEAKLLEVRPYVTYFHSSKYIGDLANGNICVAAGFSGDIL 242
Query: 217 PAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
A R +A +PK GA+LW D+ AIPA
Sbjct: 243 QAADRAEEAGKGIEIAYAIPKEGANLWFDMLAIPA 277
>gi|381205079|ref|ZP_09912150.1| extracellular solute-binding protein [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 360
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLW-RPELAGRISMVNSPREVI 150
DP+ + ++ PY WGT+ I Y+KSK K P + W L+ E +GRI+++NSP E I
Sbjct: 131 FDPK-RAYSMPYMWGTVGIGYRKSKVSK---VP-DSWASLFASSEYSGRIALLNSPSETI 185
Query: 151 GSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
+KY+G S N+ + ++ + ++Q ++F + G+V + +
Sbjct: 186 PIAMKYLGHSINTADSEVVQTVEDLMIKQK-----KHIKVFAEDNGQDLLLSGEVDLTME 240
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 247
++ D++ + ++A +VPK G LW D IP +
Sbjct: 241 YNGDIIQVQEEDDDIAYIVPKEGTLLWEDCLCIPKGA 277
>gi|163847330|ref|YP_001635374.1| extracellular solute-binding protein [Chloroflexus aurantiacus
J-10-fl]
gi|163668619|gb|ABY34985.1| extracellular solute-binding protein family 1 [Chloroflexus
aurantiacus J-10-fl]
Length = 312
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP G+ + Y+WGT + + + PI W DLW+P+LAG+I + PR+ I
Sbjct: 80 FDPGGR-HSIVYQWGTTGLLVRTDLVEQ----PITRWADLWKPDLAGKIVLWPIPRDTIN 134
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISV-QQNLALLANQARLF-DSTHYLKAFGIGDVW-VA 208
+LK +G S N+ + G+++V ++ A LA++ L + + + + D VA
Sbjct: 135 VLLKSLGYSINTTD------PGQLAVARERAAELAHRVTLTQEGDEVVTPYLLSDEHVVA 188
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 247
+GW+ D A + N+A ++P G LW D + IP S
Sbjct: 189 LGWTYDAFDAQAQNENIAYIIPAEGTILWFDNFVIPTTS 227
>gi|91794381|ref|YP_564032.1| extracellular solute-binding protein [Shewanella denitrificans
OS217]
gi|91716383|gb|ABE56309.1| extracellular solute-binding protein, family 1 [Shewanella
denitrificans OS217]
Length = 366
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNS 145
DP G +A PY WGT I Y + K + + AP++ + ++ P+ + + I+M++S
Sbjct: 121 DP-GNKFAVPYLWGTNGIGYNEGKVKALLGDDAPVDSLELIFNPKYSSKLAECGIAMLDS 179
Query: 146 PREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGD 204
+++ L Y+G + NS NI D Q A + + F S+ Y+ G+
Sbjct: 180 SEDMMPEALIYLGLNPNSKNIGDYQKAADL------MMTIRPYITYFHSSRYISDLANGN 233
Query: 205 VWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
+ VA G+S DV A R + +PK GA+LW D+ AIPA
Sbjct: 234 ICVAYGFSGDVFQAAARADEAKNGHKIGYAIPKEGANLWFDMLAIPA 280
>gi|395647669|ref|ZP_10435519.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 365
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + +P+ + +W K L+ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQPLDKSRLPNW-KNLN---PVLLKNAAASDPD---NAHAFP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I Y K R+ AP+ W L+ P A + IS ++SP E++ + L
Sbjct: 129 YMWGSIGIGYNPEKVRQALGTDAPLNSWDLLFNPRNAEKLKACGISFLDSPTEMLPAALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G N+ + D Q+A Q + F S+ Y+ G++ VAVG+S DV
Sbjct: 189 YLGYPVNTQDKD-QLA----QAQAVFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDV 243
Query: 216 LPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
L A R + +PK GA + D+ AIP
Sbjct: 244 LQARARAEEANNGVKIDYSIPKEGAGSFYDMVAIP 278
>gi|322373437|ref|ZP_08047973.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
C150]
gi|321278479|gb|EFX55548.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus sp.
C150]
Length = 355
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 36/230 (15%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WGT+ I Y +K AP + W DLW P+ +I +V+ REVIG
Sbjct: 125 FDPHND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPDYKDQIMLVDGAREVIG 179
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGI-GDVWV 207
L +G S N+ N+ +L++A K+ S+ N+ A++ ++ +K + I GD +
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDE---------MKGYMIQGDAAI 230
Query: 208 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQ 267
V +S + + + N+ VVP G++LW D IP + + + +
Sbjct: 231 GVTFSGEASEMLDKNENLRYVVPSEGSNLWFDNLVIPKTVKHKKEA------------YA 278
Query: 268 WIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQDT 314
+I F L+ A E I A+P+ L LP+ + K PS+ T
Sbjct: 279 FINFMLKPENAAQ-NAEYIGYATPNDAAKAL--LPKRITDDKAFYPSEST 325
>gi|309782676|ref|ZP_07677397.1| polyamine ABC transporter protein [Ralstonia sp. 5_7_47FAA]
gi|404397371|ref|ZP_10989162.1| hypothetical protein HMPREF0989_02854 [Ralstonia sp. 5_2_56FAA]
gi|308918454|gb|EFP64130.1| polyamine ABC transporter protein [Ralstonia sp. 5_7_47FAA]
gi|348614022|gb|EGY63585.1| hypothetical protein HMPREF0989_02854 [Ralstonia sp. 5_2_56FAA]
Length = 370
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 31/193 (16%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPRE 148
DP +++ PY + +I Y +++ R+ L P W ++ P+ + G++++++ PRE
Sbjct: 129 DPH-NVFSLPYDFTITLIGYNEARIRELGLDPT-SWSLVFDPKVLSKIRGKVTVLDDPRE 186
Query: 149 VIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
VI + L+Y G S NS + Q++ +++Q + A F+S Y++ +G++WVA
Sbjct: 187 VIAAALRYKGYSANSTSA-AQLSEAIEAIRQAMPYWA----AFNSQSYIRELTVGNIWVA 241
Query: 209 VGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS 262
+G+S+D+ A KR ++ + K G + D + I SR P
Sbjct: 242 LGYSNDIFQAKTDALNAKRPFSIKEALQKEGNGMTGDSFVI---SRT----------APH 288
Query: 263 P-LIHQWIEFCLQ 274
P L H++I F LQ
Sbjct: 289 PELAHRFINFMLQ 301
>gi|167033710|ref|YP_001668941.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166860198|gb|ABY98605.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 362
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E+ ++L Y+G S + G + L L F S+ Y+ GDV
Sbjct: 177 DELFPAILNYLGMDPRS-----EKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVC 231
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
VA G+S DV A R VA +PK G++LW DL AIP
Sbjct: 232 VAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|347548214|ref|YP_004854542.1| putative spermidine/putrescine-binding protein [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346981285|emb|CBW85222.1| Putative spermidine/putrescine-binding protein [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 357
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ P+L +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWDALFDPDLKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N L A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLMEARDKLETMTPNVKAVVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVNGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+ E + LP+E+ S D P + L E + L
Sbjct: 289 ENA-AINAEYVGYATPN--EKAVKLLPKEI-----SSDERF---YPNMDELTNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|366052509|ref|ZP_09450231.1| spermidine/putrescine ABC transporter binding protein
[Lactobacillus suebicus KCTC 3549]
Length = 357
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WGT+ I Y KF K + +E WK LW P+ I + +S R+++
Sbjct: 126 FDPHND-YSVPYFWGTLGIVYN-DKFVKR--SQVEHWKQLWNPQFKNDIMLTDSARDMMA 181
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKIS--VQQNLALLANQARLFDSTHYLKAFGIGDVWVA 208
L +G S NS N LQ A K+ A++A++ +++ + +A
Sbjct: 182 VALITLGYSVNSTNYHHLQQASQKLDQLAPNTKAVVADEIKMY--------MEQNEAPIA 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + + + S++ VVP G+++W D W IP ++
Sbjct: 234 VTYSGEAAEMMSQNSHLHYVVPSEGSNMWFDNWVIPKTAK 273
>gi|417005447|ref|ZP_11944040.1| spermidine/putrescine-binding protein [Streptococcus agalactiae FSL
S3-026]
gi|341577260|gb|EGS27668.1| spermidine/putrescine-binding protein [Streptococcus agalactiae FSL
S3-026]
Length = 357
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ K ++ PY WGT+ I Y + P + W DLWRPE +I +V+S REVIG
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLAN-QARLFDSTHYLKAFGIG-DVWVA 208
L +G N+ NI +L+ A K+ AL N +A + D +K + I D +
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLD-----ALTPNVKAIVADE---MKGYMIQVDAAIG 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V +S + + ++ VVP G++LW D IP +
Sbjct: 234 VTFSGEAREMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|422418309|ref|ZP_16495264.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL N1-067]
gi|422421436|ref|ZP_16498389.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL S4-171]
gi|313634214|gb|EFS00853.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL N1-067]
gi|313638842|gb|EFS03905.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL S4-171]
Length = 357
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 37/256 (14%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y K F N + W L+ P+L +I +++ REV+G L +G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWDALFDPDLKNQILLIDGAREVMGLGLNSLG 188
Query: 159 ASYN-SNNIDLQVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
S N +N L A K+ ++ N+ A++ ++ +L + + + VAV +S +
Sbjct: 189 YSLNDTNKAHLMEARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEA 240
Query: 216 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQT 275
+ ++ V+PK G++LW D IP + K + G H++I F L+
Sbjct: 241 AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKP 288
Query: 276 ARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
A E + A+P+ E + LP+E+ S D P + L E + L
Sbjct: 289 ENA-AINAEYVGYATPN--EKAVKLLPKEI-----SSDERF---YPNMDELTNLEVYDNL 337
Query: 336 SEATLSDYEWLVADLQ 351
+ LS Y L + +
Sbjct: 338 GKRMLSYYNELFLEFK 353
>gi|357239072|ref|ZP_09126408.1| ABC transporter, solute-binding protein [Streptococcus ictaluri
707-05]
gi|356752794|gb|EHI69919.1| ABC transporter, solute-binding protein [Streptococcus ictaluri
707-05]
Length = 357
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 16/162 (9%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ ++ PY WGT+ I Y K AP+ W+DLWRPE +I +++ RE++G
Sbjct: 127 FDPKND-YSIPYFWGTVGIVYNDKLVDK---APLH-WEDLWRPEYKNQIMLIDGAREMLG 181
Query: 152 SVLKYMGASYNSNNID-LQVAGGKISVQQNLALLAN-QARLFDSTHYLKAFGIG-DVWVA 208
L +G S NS N+D LQ A K+ AL N +A + D +K + I D +
Sbjct: 182 VGLTTLGHSVNSKNLDHLQAAEKKLQ-----ALTPNVKAIVADE---MKGYMIQEDAAIG 233
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 250
+ +S + + ++ VVP G++LW D +P + E
Sbjct: 234 ITFSGEASEMIDSNEHLHYVVPSEGSNLWFDNLVLPKTMKHE 275
>gi|386012138|ref|YP_005930415.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida
BIRD-1]
gi|313498844|gb|ADR60210.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida
BIRD-1]
Length = 362
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDRIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E+ +VL Y+G S + G + L L F S+ Y+ GDV
Sbjct: 177 DELFPAVLNYLGMDPRS-----EKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVC 231
Query: 207 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
+A G+S DV A R VA +PK G++LW DL AIP
Sbjct: 232 IAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|222525176|ref|YP_002569647.1| family 1 extracellular solute-binding protein [Chloroflexus sp.
Y-400-fl]
gi|222449055|gb|ACM53321.1| extracellular solute-binding protein family 1 [Chloroflexus sp.
Y-400-fl]
Length = 350
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP G+ + Y+WGT + + + PI W DLW+P+LAG+I + PR+ I
Sbjct: 119 DPGGR-HSIVYQWGTTGLLVRTDLVEQ----PITRWADLWKPDLAGKIVLWPIPRDTINV 173
Query: 153 VLKYMGASYNSNNIDLQVAGGKISV-QQNLALLANQARLF-DSTHYLKAFGIGDVW-VAV 209
+LK +G S N+ + G+++V ++ A LA++ L + + + + D VA+
Sbjct: 174 LLKSLGYSINTTD------PGQLAVARERAAELAHRVTLTQEGDEVVTPYLLSDEHVVAL 227
Query: 210 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 247
GW+ D A + N+A ++P G LW D + IP S
Sbjct: 228 GWTYDAFDAQAQNENIAYIIPAEGTILWFDNFVIPTTS 265
>gi|378824967|ref|YP_005187699.1| Spermidine/putrescine-binding periplasmic protein SPBP
[Sinorhizobium fredii HH103]
gi|365178019|emb|CCE94874.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Sinorhizobium fredii HH103]
Length = 364
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 117/275 (42%), Gaps = 49/275 (17%)
Query: 76 LSHKWKVYLRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK---HNLAPIEDWKDLW 132
LS+ W V + R + DP G +A Y WGT I Y K ++ + P W ++
Sbjct: 105 LSNMWDVIMERT--AKYDP-GNEYAVDYMWGTTGIGYNVDKMKEILGTDAKP--GWDVIF 159
Query: 133 RPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQNLALLAN 186
PE+A + I +++S +++ S L Y+G +S+ DL+ A L +
Sbjct: 160 NPEIAAKFKDCGIHLLDSATDIMPSALAYLGLDPDSHKQADLEKAADL------LMKVRP 213
Query: 187 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 240
R F S+ Y+ A GD+ +AVG+S D+ A R + V +P GA +W D+
Sbjct: 214 YIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEAKAGVTVDYSIPPQGAQMWFDM 273
Query: 241 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 300
A+PA + + H++I + + K EVI AS K
Sbjct: 274 LAMPADAPHAAEA------------HEFINYMM--------KPEVIAKASNYVFYANGNK 313
Query: 301 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 335
++ L + +DT + P E++ + P
Sbjct: 314 ASQQFLDKEVIEDTAI---YPSDEVMQKLFTTTPF 345
>gi|325267774|ref|ZP_08134424.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Kingella denitrificans ATCC 33394]
gi|324980655|gb|EGC16317.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Kingella denitrificans ATCC 33394]
Length = 394
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 91 EIDPRGKIWAAPYRWGTMVIAYKKSKFRK---HNLAPIEDWKDLWRPELAGR-----ISM 142
++DP G +A PY WG +A + K P +W ++ P+ + IS
Sbjct: 146 QVDP-GNKYAVPYFWGINTLAINTEQVAKALGDTPMPANEWDLVFNPQYTAKLKSCGISF 204
Query: 143 VNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFG 201
+SP E VLKYMG NS N DL+ A L + + F S+ Y+
Sbjct: 205 FDSPTEQYPLVLKYMGKDPNSENPADLEAANAL------LKQVRGDVKRFSSSGYIDGLA 258
Query: 202 IGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
GD+ VA+G+ D+ A +R N+ V+ PK+G +W D + IP
Sbjct: 259 NGDLCVAIGYGGDLNIAKRRAQEAGGKHNIQVLAPKTGVGIWIDSFMIP 307
>gi|399001732|ref|ZP_10704442.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398126856|gb|EJM16279.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 365
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + + + ++ +W K L+ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQELDKSKLPNW-KNLN---PVLLKNASASDPD---NGHAFP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + +K ++ AP+ W L++PE A + IS ++SP E++ + L
Sbjct: 129 YMWGSIGIGFNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWS 212
Y+G NS + K + + AL F S+ Y+ G++ VAVG+S
Sbjct: 189 YLGYPVNSRD--------KAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYS 240
Query: 213 SDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL 264
DVL A R + +PK GA + D+ AIP AA+ + P +
Sbjct: 241 GDVLQAKARAQEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDII 300
Query: 265 --IHQWIEFCLQTARALPFKQEVI---PGA-SPSALETTLVKLPE 303
+ I + A A P E I PG+ P A+ TL +P+
Sbjct: 301 AEVTNSIGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|419838750|ref|ZP_14362170.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
haemolyticus HK386]
gi|386909978|gb|EIJ74640.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
haemolyticus HK386]
Length = 350
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+ + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NPSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|325291998|ref|YP_004277862.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
sp. H13-3]
gi|418408087|ref|ZP_12981404.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
gi|325059851|gb|ADY63542.1| putrescine ABC transporter, substrate binding protein
[Agrobacterium sp. H13-3]
gi|358006073|gb|EHJ98398.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
Length = 365
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A Y WGT I Y +K + P++ W L++PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDILFKPENAEKLKSCGINILDAS 179
Query: 147 REVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E + Y+G + +S DL+ G S + + F+S+ Y+ GD
Sbjct: 180 DETFAIAMNYLGKNPDSKETADLEAGGAVYSKIRPFV------KTFNSSAYIDELANGDS 233
Query: 206 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ +GWS D+L A KR V V+PK G +W D AIPA ++
Sbjct: 234 CITIGWSGDILQAKKRAEEAKNGVEVNYVIPKEGTYMWFDNLAIPADAK 282
>gi|399925056|ref|ZP_10782414.1| extracellular solute-binding protein [Peptoniphilus rhinitidis
1-13]
Length = 347
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V D + IK+ LI I E+ F + K K DP K ++ P
Sbjct: 76 DVVVPSDYMIERLIKEDLIREI-NFENIKNFDGVEDKLK-------NPTFDPENK-YSVP 126
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y WGT+ I Y K++ + ++ W LW + +I M NS R+ IG LK +G S N
Sbjct: 127 YFWGTVGIVYNKAEVKDK----VDSWDILWDKKYKDQIIMYNSQRDTIGVALKRLGYSLN 182
Query: 163 SNN-IDLQVAGGKISVQQNL--ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 219
S N +L+ A + Q+ L A L + R GD ++V +S D L +
Sbjct: 183 STNEKELEEAKKSLIEQKPLVYAYLDDDGR--------DVIVQGDANLSVMYSGDALLMM 234
Query: 220 KRMSNVAVVVPKSGASLWADLWAIPAASR 248
+ ++ V+PK G+++W D IP ++
Sbjct: 235 DQNEDLDYVIPKEGSNIWYDSMVIPKNAK 263
>gi|398993424|ref|ZP_10696374.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398134794|gb|EJM23930.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 368
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 31/192 (16%)
Query: 96 GKIWAAPYRWGTMVIAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----ISMVNSPREV 149
G +++APY WG+ I Y K ++ API ++ P++ R +++V++P EV
Sbjct: 126 GTLYSAPYTWGSNGITYNVDKIKERMPDAPIGSLAMIFDPKIVSRFADCGVTLVDAPTEV 185
Query: 150 IGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVA 208
I LKY+G S A + Q L L + + FDS +YL + GDV +A
Sbjct: 186 IPLALKYLGRDPRS------AAPEDLKAAQELLLSVRPYIKKFDSVNYLTSLPNGDVCMA 239
Query: 209 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS 262
+ WS D A+ R N+A +PK G+ +W D IPA + +
Sbjct: 240 MTWSGDYATAMARAEEAKLNINLAYFIPKEGSLIWFDNMYIPA----DAPHVAN------ 289
Query: 263 PLIHQWIEFCLQ 274
H+++E+ +Q
Sbjct: 290 --AHKFLEYLMQ 299
>gi|157960774|ref|YP_001500808.1| extracellular solute-binding protein [Shewanella pealeana ATCC
700345]
gi|157845774|gb|ABV86273.1| extracellular solute-binding protein family 1 [Shewanella pealeana
ATCC 700345]
Length = 366
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNS 145
DP G ++ PY WGT I Y K + AP++ + ++ P+ A ++S +++S
Sbjct: 121 DP-GNQYSVPYLWGTNGIGYNVEKVKAVLGEDAPVDSLELIFNPKYAEKVSQCGLSLLDS 179
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E+I L Y+G NS D G++ LA + F S+ Y+ GD+
Sbjct: 180 ADEMIPMALIYLGLDPNSTKADDFKKAGEV-----LAKVRPYITYFHSSRYITDLANGDI 234
Query: 206 WVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 245
VA G+S D+ A R + + +PK G++LW D+ AIPA
Sbjct: 235 CVAFGYSGDIFQAADRADEAENGNTIEYSIPKEGSNLWFDMLAIPA 280
>gi|262403152|ref|ZP_06079712.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
gi|262350651|gb|EEY99784.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
Length = 344
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 35/253 (13%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP+ K ++ PY WG + Y + I W DLW + ++ +++ R+V G
Sbjct: 117 DPQNK-YSLPYIWGITGLYYNSATLPNG----ITKWADLWDKQYEQQVMLIDDIRDVFGM 171
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWS 212
LK G S N+ N D ++ ++L L N L++S + G+ + + W+
Sbjct: 172 ALKLNGFSINTKNED-EIK----KAYESLVALKNNVLLYNSDAPHVPYVSGEATLGMQWN 226
Query: 213 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFC 272
+ M + V+P+ GA LW D + IP+ S+ PL H++I F
Sbjct: 227 GNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSK------------NIPLAHKFINFM 274
Query: 273 LQTARALPFKQEVIPG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEF 331
Q + E++ SA + LP EL +D I P E + + EF
Sbjct: 275 YQPEN----QAEIVKSLGYASATKGGRALLPAEL------RDNPTI--FPSEEDMKKGEF 322
Query: 332 LEPLSEATLSDYE 344
+ + TL+ YE
Sbjct: 323 INDVGPETLAIYE 335
>gi|313679879|ref|YP_004057618.1| extracellular solute-binding protein [Oceanithermus profundus DSM
14977]
gi|313152594|gb|ADR36445.1| extracellular solute-binding protein family 1 [Oceanithermus
profundus DSM 14977]
Length = 341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 51/296 (17%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV D +++ + LI+P+ D D L + + + + DP G ++ P
Sbjct: 71 DLVVPPDYYVAEMARAGLIQPL----DHDRIPNLKNLYPEFQNPD----YDP-GNRYSVP 121
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRP-ELAGRISMVNSPREVIGSVLKYMGASY 161
Y+WGT IAY+ S+ ++ P++ W + P + G +++ RE IG+ LKY+G S
Sbjct: 122 YQWGTTGIAYRASEVKQ----PVDSWGVFFDPAQYQGPFLLLDEMRETIGAALKYLGYSL 177
Query: 162 NSNNIDLQVAGGKISVQQNLALLANQAR----LFDSTHYLKAFGIGDVWVAVGWSSDVLP 217
N + +++ LL + R S GD V +S D+
Sbjct: 178 NDTD--------PAHLEEAKQLLIDAKRRGLGFAGSVEGRSRLLAGDAVVVHNYSGDIFQ 229
Query: 218 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTA 276
+ ++ V+PK G ++W D A+PA + P P L + ++ F L+
Sbjct: 230 IQEEDDDIVYVIPKEGGTIWMDAVAMPAGA-------------PHPDLAYAFLNFILEP- 275
Query: 277 RALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFL 332
E+ S + V+ E L + D + PP E+ A+ EF+
Sbjct: 276 -------EIAAAISNYNYYASPVQAAEPYLDPELLNDPAV---YPPPEVRAKLEFI 321
>gi|424909501|ref|ZP_18332878.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845532|gb|EJA98054.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 365
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A Y WGT I Y +K + P++ W L++PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDILFKPENAEKLKSCGINILDAS 179
Query: 147 REVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E + Y+G + +S AGG + ++ + + F+S+ Y+ GD
Sbjct: 180 DETFAIAMNYLGKNPDSKETADLEAGGDVYMK-----IRPYVKTFNSSAYIDELANGDSC 234
Query: 207 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 248
+ +GWS D+L A R V V+PK G +W D AIPA ++
Sbjct: 235 ITIGWSGDILQAKSRAEEAKNGVEVNYVIPKEGTYMWFDNLAIPADAK 282
>gi|253681534|ref|ZP_04862331.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
gi|253561246|gb|EES90698.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
Length = 347
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ + ++ PY WGT+ I Y + I+ W LW P+ +I MV+S R+ I
Sbjct: 120 FDPKNQ-YSVPYMWGTVGIIYNTKLIKDK----IDSWNALWNPKYKDQILMVDSQRDAIA 174
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK +G S N+ N +L+ A ++ Q+ L +A + D L G +AV
Sbjct: 175 VALKKLGYSINTTNKGELKKAEQELMKQKPLV----RAYVGDEVKDLMVDEEG--AIAVV 228
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 247
WS D + +K N+ V+PK G++LW D IP S
Sbjct: 229 WSGDAITMMKNNPNLRYVIPKEGSNLWFDNMVIPKGS 265
>gi|406707040|ref|YP_006757392.1| extracellular solute-binding protein [alpha proteobacterium HIMB59]
gi|406652816|gb|AFS48215.1| extracellular solute-binding protein [alpha proteobacterium HIMB59]
Length = 354
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV S++ IK + + + D+ LS+ L + DA DP G+ ++
Sbjct: 70 DLVVPSGSFMENQIKAGVFQKL----DKSKLSNLSNLDPSVLEKTDAH--DPGGE-YSVN 122
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYM 157
Y +GT I Y + + +E W ++ P+ + ++M+++P EV+ L Y+
Sbjct: 123 YMYGTTGIGYNVAAVEERG-GDVESWDIIFNPDEISKYADCGVAMLDAPSEVVEIALNYL 181
Query: 158 GASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSD 214
G N+ N ++ L LL + FDS+ Y+ G++ +AVGWS D
Sbjct: 182 GYDPNTENTKAN--------EEALELLKQIRPYIKYFDSSQYIDDLANGEICLAVGWSGD 233
Query: 215 V-LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 248
V + A + + V +P G +W D+ IPA ++
Sbjct: 234 VFIAAYEEIEEVWYSIPNEGTVIWFDMMGIPADAK 268
>gi|335357864|ref|ZP_08549734.1| spermidine/putrescine-binding protein [Lactobacillus animalis KCTC
3501]
Length = 357
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 33/254 (12%)
Query: 99 WAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG 158
++ PY WGT+ I Y KF + + + W DLW P+L +I ++ RE +G L MG
Sbjct: 132 YSVPYFWGTLGIIYN-DKF--YQASQFKTWNDLWDPQLKNKIMFIDGAREFMGIGLASMG 188
Query: 159 ASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLP 217
S NS N+ DL A K L L A+ S + VAV +S +
Sbjct: 189 RSLNSKNDADLDRAYNK------LKALTPNAKAIVSDEIKTYMANEESSVAVTFSGEAAD 242
Query: 218 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 277
+++ S++ V+P+ G +LW D IP ++ KQ +++I F L
Sbjct: 243 MMEKNSHLHYVIPEGGTNLWFDNLVIPKTAK--NKQGA----------YEFINFMLDPKN 290
Query: 278 ALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 337
A E I ++P+ + L LP+ + K P A + + E E L
Sbjct: 291 AAQ-NTEYIGYSTPN--KAALKYLPKAITSNKEF--------YPSAARIKQMEIYEDLGP 339
Query: 338 ATLSDYEWLVADLQ 351
L Y L +L+
Sbjct: 340 KYLEKYNDLFLELK 353
>gi|398995885|ref|ZP_10698753.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398128443|gb|EJM17832.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 365
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 35/283 (12%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V +S+L+ IK + + + ++ +W K L+ V L+ A + D A P
Sbjct: 76 DIVVPSNSFLAKQIKAGVYQTLDKSKLPNW-KNLN---PVLLKNASASDPD---NAHAFP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + +K ++ AP W L++PE A + IS ++SP E++ + L
Sbjct: 129 YMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPAALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSD 214
Y+G NS + G+I+ + L + + F S+ Y+ G++ VAVG+S D
Sbjct: 189 YLGYPVNSQD------KGQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGD 242
Query: 215 VLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL-- 264
VL A R + +PK GA + D+ AIP AA+ + P +
Sbjct: 243 VLQAKARAQESGNSVQIDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAE 302
Query: 265 IHQWIEFCLQTARALPFKQEVI---PGASPSA-LETTLVKLPE 303
I I + A A P E I PG+ PS + TL +P+
Sbjct: 303 ITNNIGYSNANAAATPLVDEAIRDDPGSYPSQDVMATLYAIPD 345
>gi|417845005|ref|ZP_12491038.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21639]
gi|341955897|gb|EGT82342.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21639]
Length = 350
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKS---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+ + + W+ A K
Sbjct: 189 TTNEEDIKTAYERLE-----KLLPNIAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NPSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|218887047|ref|YP_002436368.1| extracellular solute-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758001|gb|ACL08900.1| extracellular solute-binding protein family 1 [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 358
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP G ++ PY WG+ + + + + A I W DL RPE AG++ + + R+ +G
Sbjct: 129 FDP-GNEYSVPYMWGSAGLMVNR---KVVDPASITSWNDLNRPEFAGKVILSDDQRDSMG 184
Query: 152 SVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVG 210
LK +G S NS N +++ A + L L R+FD T +AF +V +
Sbjct: 185 VALKALGYSVNSTNEAEIKAA------YEWLKKLLPAVRVFDVTASKQAFISEEVAAGLI 238
Query: 211 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIE 270
W+ D A N+ V P+ G LW D AIP ++ + H++I+
Sbjct: 239 WNGDAYIAASENENLVYVYPREGVPLWVDSLAIPVGAKHKDNA------------HKFID 286
Query: 271 FCLQ 274
F L+
Sbjct: 287 FLLR 290
>gi|442804688|ref|YP_007372837.1| spermidine/putrescine transport system substarte-binding protein
PotD [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442740538|gb|AGC68227.1| spermidine/putrescine transport system substarte-binding protein
PotD [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 352
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 47/255 (18%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS 152
DP + ++ PY WGT+ I Y + ++ W LW + AG+I M++S R+ IG
Sbjct: 122 DPTNE-YSVPYFWGTLGILYNTEMVDEE----VDSWDILWNEKYAGKILMLDSMRDTIGV 176
Query: 153 VLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHY--LKAFGI-GDVWVAV 209
LK +G S N+ + + ++Q LL Q L + + +K I GD +AV
Sbjct: 177 ALKKLGYSLNTTDTE--------KLEQAKQLLIQQRPLVNGYYVDEIKDMMINGDAAIAV 228
Query: 210 GWSSDVLPAV-KRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
WS + + + + VVPK G++LW D IP S+ + + +
Sbjct: 229 DWSGSAMDIYWEGIDYIKYVVPKEGSNLWFDCMVIPKTSQHKKEA------------EMF 276
Query: 269 IEFCLQTARALPFKQEVIPG-ASP--SALETTLVKLPE--ELLKGKPSQDTNLIVGVPPA 323
I F L A ++ + G ASP A E + + PE E+ PS+
Sbjct: 277 INFMLDPENA--YQNSLYVGYASPVTEAFERIMQENPEVAEMDAYNPSE----------- 323
Query: 324 EILARCEFLEPLSEA 338
E+L +CE L ++
Sbjct: 324 EVLDKCEVFIDLGDS 338
>gi|113971253|ref|YP_735046.1| extracellular solute-binding protein [Shewanella sp. MR-4]
gi|117921535|ref|YP_870727.1| extracellular solute-binding protein [Shewanella sp. ANA-3]
gi|113885937|gb|ABI39989.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-4]
gi|117613867|gb|ABK49321.1| extracellular solute-binding protein, family 1 [Shewanella sp.
ANA-3]
Length = 387
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 50/300 (16%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L+ IK +P+ ++ + FK L+ L + D G +A P
Sbjct: 98 DIVVPSNHFLAKQIKAGAFKPLDRSKLSN-FKNLNADLMKQLEKADPG------NQYAVP 150
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLK 155
Y WGT I Y K + AP + + ++ P+ A +IS M++S +++ +
Sbjct: 151 YLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKISKCGFAMLDSADDMVPQAMI 210
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G NS + G++ L + F S+ Y+ GD+ VA G+S DV
Sbjct: 211 YLGLDPNSTKAEDYEKAGEL-----LEKIRPYVTYFHSSRYISDLANGDICVAFGFSGDV 265
Query: 216 LPAVKRM------SNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQW 268
A R + + +PK GA+LW D+ AIPA A+ +E H+
Sbjct: 266 FQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAANVENA-------------HKL 312
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 328
I + L+ P V A+P+ LV +E ++ P+ PP E+L +
Sbjct: 313 INYLLRPEVIAPISNYV-AYANPNDPAQPLV---DEAIRNDPAI-------YPPKEVLDK 361
>gi|146305386|ref|YP_001185851.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|145573587|gb|ABP83119.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
Length = 363
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 24/215 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
D+V + +L I+ +P+ A+ +W L L ND G ++ P
Sbjct: 75 DVVVPSNHFLGKQIRAGAFQPLDRAKLPNW-DNLDQALLKQLETNDPG------NQYSVP 127
Query: 103 YRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKY 156
Y WGT I Y K + + I+ W L+ E ++S ++S E+I ++L Y
Sbjct: 128 YLWGTNGIGYNVEKIKAVLGVEEIDSWAVLFEAENIKKLSQCGVAFLDSADEMIPAMLNY 187
Query: 157 MGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVL 216
+G NS N D + L + F S+ Y+ G++ VA G+S D+L
Sbjct: 188 LGLDPNSTNPD-----DYAKAEAKLLEVRPYVTYFHSSKYIGDLANGNICVAAGFSGDIL 242
Query: 217 PAVKRMSN------VAVVVPKSGASLWADLWAIPA 245
A R +A +PK GA+LW D+ AIPA
Sbjct: 243 QAADRAEEAGKGIEIAYAIPKEGANLWFDMLAIPA 277
>gi|429330947|ref|ZP_19211721.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas putida CSV86]
gi|428764274|gb|EKX86415.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas putida CSV86]
Length = 364
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 84 LRRNDAGEIDPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGRIS- 141
L RND G +A PY WGT I Y K + I+ W L+ PE ++S
Sbjct: 116 LERNDPGNQ------YAVPYLWGTNGIGYNVEKVKAVLGTDKIDSWATLFEPENIKKLSS 169
Query: 142 ----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHY 196
++S E++ ++L Y+G NS + D + A + L + F S+ Y
Sbjct: 170 CGVAFLDSADEMLPAMLNYLGLDPNSQDPKDYKKA------EDKLLAIRPYVTYFHSSKY 223
Query: 197 LKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
+ GD+ VA G+S DV A R +VA V+PK G +LW D+ AIP
Sbjct: 224 ISDLANGDICVAAGFSGDVFQAKARAEEAGKGVDVAYVIPKEGGNLWFDMLAIP 277
>gi|421452923|ref|ZP_15902279.1| Spermidine/putrescine-binding protein [Streptococcus salivarius
K12]
gi|400181232|gb|EJO15499.1| Spermidine/putrescine-binding protein [Streptococcus salivarius
K12]
Length = 355
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP ++ PY WGT+ I Y +K AP + W DLW PE +I +V+ REV+G
Sbjct: 125 FDPNND-YSIPYFWGTVGIVYNTKLVKK---AP-QHWNDLWSPEYRNQIMLVDGAREVLG 179
Query: 152 SVLKYMGASYNSNNI-DLQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGI-GDVWVA 208
L +G S N+ N+ +L++A K+ S+ N+ + +K + + GD +
Sbjct: 180 FSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDE--------MKGYMVQGDAAIG 231
Query: 209 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQW 268
V +S + + + ++ VVP G++LW D IP + E + + +
Sbjct: 232 VTFSGEASEMLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEA------------YAF 279
Query: 269 IEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGK---PSQDT 314
I F L+ A E I A+P+ L LP+ + K PS+ T
Sbjct: 280 INFMLKPENAAQ-NAEYIGYATPNEAAKAL--LPKSITDDKAFYPSEST 325
>gi|373466353|ref|ZP_09557671.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sp. oral taxon 851 str. F0397]
gi|371760719|gb|EHO49392.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sp. oral taxon 851 str. F0397]
Length = 350
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 31/237 (13%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +++ IK+++++PI DQ + K L + E DP K ++ P
Sbjct: 81 DLVFPSSYYVNKMIKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLP 131
Query: 103 YRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN 162
Y +G I + I W DLW+PE G++ M + REV L G S N
Sbjct: 132 YVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPN 188
Query: 163 SNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 221
+ N D++ A ++ LL N A F+S + G+ + + W+ A K
Sbjct: 189 TTNEEDIRTAYERLE-----KLLPNVAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKE 242
Query: 222 MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 278
++ V PK GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 243 NPSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|13194613|gb|AAK15488.1|AF323694_3 PotF2 [Pseudomonas fluorescens]
Length = 365
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSP 146
DP G +A PY WGT I Y K + + I+ W L+ PE + +S ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVEKIKAVLGVEKIDSWAMLFEPENIKKLSSCGVSFLDSG 179
Query: 147 REVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
E+I ++L Y+G + NS + D + A + L + F+S+ Y+ G++
Sbjct: 180 DEMIPAMLNYLGLNPNSEDPEDYKKA------EAQLLKIRPYVTYFNSSKYISDLANGEI 233
Query: 206 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 244
VA G+S D+ A R S +A V+PK G +LW D+ AIP
Sbjct: 234 CVAAGFSGDIFQAAARASEAGKGVEIAYVIPKEGGNLWFDMLAIP 278
>gi|404378409|ref|ZP_10983503.1| hypothetical protein HMPREF9021_00368 [Simonsiella muelleri ATCC
29453]
gi|294484281|gb|EFG31964.1| hypothetical protein HMPREF9021_00368 [Simonsiella muelleri ATCC
29453]
Length = 381
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 44/260 (16%)
Query: 96 GKIWAAPYRWGTMVIAYKKSKFRK---HNLAPIEDWKDLWRPELAGR-----ISMVNSPR 147
G +A PY WG +A K K + P W +++PE + IS +SP
Sbjct: 137 GNQYAVPYFWGINTLAINKDMVVKALGTDKLPENTWDLVFKPEYTNKLKSCGISFFDSPT 196
Query: 148 EVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVW 206
E I VLKY+G + NS N D+Q A L + + + + S+ Y+ GD+
Sbjct: 197 EQIPLVLKYLGKNPNSENEADIQAAFDL------LKTVHHDVKRYTSSGYIDNLAKGDLC 250
Query: 207 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRG 260
V++G+ D+ A +R N+ V+ PK+G +W D + IP + K +
Sbjct: 251 VSIGYGGDLNIAKRRAKEAGNQVNIDVLTPKTGVGIWIDSFMIPK----DAKNVANA--- 303
Query: 261 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGV 320
H++I + L+ A V +P+A + EL+K + SQD ++
Sbjct: 304 -----HKYINYTLEPKVAAQNGDFVT--YAPAATQA------RELMKPEFSQDASIF--- 347
Query: 321 PPAEILARCEFLEPLSEATL 340
P E+ A + P S A +
Sbjct: 348 PSEEVKANSFVVLPKSPAVV 367
>gi|33596323|ref|NP_883966.1| polyamine transport protein [Bordetella parapertussis 12822]
gi|33566092|emb|CAE36992.1| putative polyamine transport protein [Bordetella parapertussis]
Length = 400
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 25/169 (14%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVN 144
IDP G + P+ +GT + Y +K R+ + +W L++PE A + ISM++
Sbjct: 154 IDP-GNQYVIPWGYGTNGLGYNVTKVRQIMGEGVDLANWDMLFKPENAAKLKECGISMLD 212
Query: 145 SPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFG 201
+V +VLKY+G NS N D ++ LALL R F S+ Y+
Sbjct: 213 EAAQVFPAVLKYLGKDPNSANTD--------DYKEALALLKQIRPYIRQFSSSGYIDELA 264
Query: 202 IGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 244
+GD+ + G+S DV+ A +R + +PK GA W D+ AIP
Sbjct: 265 VGDLCMVYGFSGDVMIARRRAQEARKPYEINYFIPKGGAPAWFDVMAIP 313
>gi|398854682|ref|ZP_10611228.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398235060|gb|EJN20915.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 134/283 (47%), Gaps = 33/283 (11%)
Query: 43 DLVSVGDSWLSFAIKKRLIEPIAGAEDQDWFKCLSHKWKVYLRRNDAGEIDPRGKIWAAP 102
DLV +S+L+ IK + + + ++ +W K L+ V L+ A + D A P
Sbjct: 76 DLVVPSNSFLAKQIKAGVYQTLDKSKLPNW-KNLN---PVLLKNAAASDPD---NAHAFP 128
Query: 103 YRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLK 155
Y WG++ I + +K ++ AP W L++PE A + IS ++SP E+I + L
Sbjct: 129 YMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPAALH 188
Query: 156 YMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDV 215
Y+G N D A K + + + N A F S+ Y+ G++ VAVG+S DV
Sbjct: 189 YLGYPVN----DKDTAHIKEAEALFMKIRPNVA-YFHSSKYISDLANGNICVAVGYSGDV 243
Query: 216 LP----AVKRMSNVAV--VVPKSGASLWADLWAIP-AASRLETKQIGGRVRGPSPLIHQW 268
L AV+ +NV + +PK GA + D+ AIP A+ ++ + +I +
Sbjct: 244 LQAKARAVESGNNVVIDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMDFLMRPDIIAEI 303
Query: 269 IE---FCLQTARALPFKQEVI---PGASPS-ALETTLVKLPEE 304
+ A A P E I PG+ PS A+ TL +P++
Sbjct: 304 TNSNGYSNANAAATPLVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|226946878|ref|YP_002801951.1| polyamine transporter periplasmic protein PotF [Azotobacter
vinelandii DJ]
gi|226721805|gb|ACO80976.1| Polyamine transporter periplasmic protein PotF [Azotobacter
vinelandii DJ]
Length = 371
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 42/228 (18%)
Query: 93 DPRGKIWAAPYRWGTMVIAYKKSKFRK--HNLAPIEDWKDLWRPE-----LAGRISMVNS 145
DP G +A PY WGT+ I Y K + + AP++ W +++PE A +S ++S
Sbjct: 126 DP-GNQYAVPYMWGTIGIGYNVDKVKAALGDHAPVDSWDLVFKPENIEKLKACGVSFLDS 184
Query: 146 PREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDV 205
P E++ + L Y+G + +S N + K + + L + N A F S+ Y+ GD
Sbjct: 185 PTEMLPAALHYLGFAPDSGNPEEL----KKAEELFLKIRPNVA-YFHSSKYISDLANGDT 239
Query: 206 WVAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR----------- 248
VAVG+S D+ + R V +PK GA + D+ AIPA ++
Sbjct: 240 CVAVGYSGDIYQSKARAEEVGNNVKIGYSIPKEGAGSFFDVLAIPADAKNVDQAHAFIDY 299
Query: 249 -LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI---PGASPS 292
++ + I G I + F A A P E I PG PS
Sbjct: 300 LMKPQVIAG--------ITNEVRFPNGNAAATPLVDEAIRTDPGIYPS 339
>gi|78358712|ref|YP_390161.1| ABC transporter substrate-binding protein [Desulfovibrio alaskensis
G20]
gi|78221117|gb|ABB40466.1| extracellular solute-binding protein family 1 [Desulfovibrio
alaskensis G20]
Length = 348
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 92 IDPRGKIWAAPYRWGTMVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIG 151
DP+ + ++ PY WG+ + + A + W DL RPE G+I + + R+ +G
Sbjct: 119 FDPKNE-YSVPYMWGSTSLLVNTDHV---DPASVTSWHDLLRPEFKGKIILSDDLRDTMG 174
Query: 152 SVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGW 211
L G S NS + D ++ ++Q L R+FD T +AF +V + + W
Sbjct: 175 MALLATGHSVNSRS-DAELKEAYEFLKQ----LYPSVRVFDVTATKQAFASEEVIIGMSW 229
Query: 212 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 244
+ D + M N+ + P+ GA LW D IP
Sbjct: 230 NGDATVLTQEMPNLQYIYPREGAPLWLDSLCIP 262
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,111,818,968
Number of Sequences: 23463169
Number of extensions: 256342572
Number of successful extensions: 572025
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 3263
Number of HSP's that attempted gapping in prelim test: 564093
Number of HSP's gapped (non-prelim): 4243
length of query: 380
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 236
effective length of database: 8,980,499,031
effective search space: 2119397771316
effective search space used: 2119397771316
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)