Query 016930
Match_columns 380
No_of_seqs 264 out of 820
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 04:05:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016930.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016930hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2458 Endoplasmic reticulum 100.0 3E-123 7E-128 919.0 26.7 372 1-377 156-528 (528)
2 PF05686 Glyco_transf_90: Glyc 100.0 4E-113 8E-118 863.5 30.7 368 1-369 28-395 (395)
3 smart00672 CAP10 Putative lipo 100.0 2.7E-72 5.8E-77 536.2 21.5 248 50-299 1-256 (256)
4 PF13524 Glyco_trans_1_2: Glyc 97.9 4.9E-05 1.1E-09 60.7 8.5 82 198-285 9-90 (92)
5 PRK10307 putative glycosyl tra 80.1 8.5 0.00018 38.6 8.6 82 203-291 323-407 (412)
6 cd03801 GT1_YqgM_like This fam 79.5 8.5 0.00018 35.9 7.9 86 198-287 286-371 (374)
7 COG4641 Uncharacterized protei 78.9 8.5 0.00018 39.1 7.9 71 199-275 275-345 (373)
8 PRK15427 colanic acid biosynth 78.5 11 0.00023 38.4 8.8 87 200-290 317-404 (406)
9 cd04962 GT1_like_5 This family 76.4 15 0.00033 35.6 8.9 85 202-290 285-369 (371)
10 cd05844 GT1_like_7 Glycosyltra 72.5 14 0.00031 35.7 7.6 82 200-285 283-364 (367)
11 cd03808 GT1_cap1E_like This fa 71.5 20 0.00043 33.5 8.2 81 199-283 275-355 (359)
12 TIGR02472 sucr_P_syn_N sucrose 70.5 13 0.00028 38.1 7.1 82 203-289 356-438 (439)
13 cd03822 GT1_ecORF704_like This 69.9 22 0.00048 33.7 8.2 79 199-283 281-359 (366)
14 TIGR03088 stp2 sugar transfera 69.7 29 0.00063 34.0 9.2 86 200-289 285-370 (374)
15 cd03794 GT1_wbuB_like This fam 69.6 15 0.00033 34.7 7.0 78 201-282 313-390 (394)
16 cd03807 GT1_WbnK_like This fam 68.8 25 0.00055 32.9 8.3 78 199-283 280-358 (365)
17 TIGR02149 glgA_Coryne glycogen 68.6 23 0.00049 34.7 8.2 77 205-285 298-380 (388)
18 TIGR03087 stp1 sugar transfera 68.0 26 0.00057 35.0 8.6 83 199-289 310-394 (397)
19 cd03825 GT1_wcfI_like This fam 66.8 29 0.00062 33.2 8.3 81 200-285 277-358 (365)
20 PF00534 Glycos_transf_1: Glyc 66.6 16 0.00035 31.4 6.0 69 199-271 104-172 (172)
21 cd03795 GT1_like_4 This family 66.3 16 0.00034 34.9 6.4 78 200-281 278-356 (357)
22 PRK15484 lipopolysaccharide 1, 64.6 30 0.00066 34.6 8.3 84 204-292 294-378 (380)
23 cd03818 GT1_ExpC_like This fam 63.6 37 0.00079 33.9 8.7 75 203-281 316-390 (396)
24 cd03817 GT1_UGDG_like This fam 62.1 43 0.00093 31.5 8.5 72 200-276 291-362 (374)
25 cd03799 GT1_amsK_like This is 61.9 24 0.00052 33.6 6.8 78 200-281 274-351 (355)
26 cd03792 GT1_Trehalose_phosphor 61.6 38 0.00082 33.4 8.3 81 203-289 289-369 (372)
27 PRK05749 3-deoxy-D-manno-octul 60.5 15 0.00033 37.1 5.4 68 204-275 337-406 (425)
28 PF03016 Exostosin: Exostosin 60.0 41 0.00089 32.0 8.0 126 91-236 152-284 (302)
29 cd04955 GT1_like_6 This family 59.8 32 0.00069 33.0 7.2 81 200-288 281-361 (363)
30 cd03805 GT1_ALG2_like This fam 49.2 40 0.00087 33.0 6.1 74 204-282 316-389 (392)
31 cd03798 GT1_wlbH_like This fam 48.7 71 0.0015 29.7 7.5 86 199-290 290-375 (377)
32 cd03821 GT1_Bme6_like This fam 47.3 77 0.0017 29.7 7.5 77 199-282 293-370 (375)
33 cd03823 GT1_ExpE7_like This fa 46.4 82 0.0018 29.5 7.6 73 198-274 274-346 (359)
34 cd03800 GT1_Sucrose_synthase T 45.0 71 0.0015 31.0 7.1 76 204-283 319-394 (398)
35 TIGR03449 mycothiol_MshA UDP-N 45.0 1.1E+02 0.0025 30.1 8.7 85 200-289 315-399 (405)
36 cd03813 GT1_like_3 This family 43.5 1.1E+02 0.0023 31.8 8.4 81 200-282 383-467 (475)
37 cd04946 GT1_AmsK_like This fam 42.1 76 0.0016 32.1 7.0 80 200-282 323-402 (407)
38 cd03814 GT1_like_2 This family 41.9 1E+02 0.0022 29.0 7.5 78 200-282 279-356 (364)
39 PLN02871 UDP-sulfoquinovose:DA 36.4 1.1E+02 0.0024 31.4 7.2 36 244-280 387-422 (465)
40 cd03809 GT1_mtfB_like This fam 35.2 78 0.0017 29.9 5.5 75 200-281 285-359 (365)
41 cd03819 GT1_WavL_like This fam 34.2 1.1E+02 0.0024 29.2 6.4 77 199-279 276-353 (355)
42 cd03816 GT1_ALG1_like This fam 33.3 83 0.0018 31.9 5.7 75 197-277 327-404 (415)
43 cd03820 GT1_amsD_like This fam 31.8 1.6E+02 0.0036 27.0 7.0 79 199-282 264-343 (348)
44 TIGR02470 sucr_synth sucrose s 28.8 2E+02 0.0043 32.4 7.9 80 206-289 662-745 (784)
45 cd04951 GT1_WbdM_like This fam 28.4 2.4E+02 0.0052 26.7 7.7 83 200-289 275-358 (360)
46 cd03796 GT1_PIG-A_like This fa 28.2 2E+02 0.0043 28.6 7.3 82 202-289 284-365 (398)
47 PRK09922 UDP-D-galactose:(gluc 23.0 1.7E+02 0.0036 28.7 5.6 82 200-284 270-353 (359)
48 cd03872 M14_CPA6 Carboxypeptid 20.7 1.8E+02 0.004 28.7 5.2 67 285-354 87-170 (300)
49 KOG2619 Fucosyltransferase [Ca 20.5 5.4E+02 0.012 26.4 8.6 119 126-254 190-313 (372)
No 1
>KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only]
Probab=100.00 E-value=3.1e-123 Score=918.97 Aligned_cols=372 Identities=59% Similarity=1.202 Sum_probs=364.5
Q ss_pred ChhhhhccCeEEEEEECCEEEEEccccccCCcchhHHHHHHHHHHhCCCCCCCeEEEEecCcccceeccccCCCCCCCCC
Q 016930 1 MVERARKTANFRLVIVKGKAYVETYTKAFQSRDTFTLWGILQLLRRYPGRIPDLDLMFDCVDWPVVLRNAYCAPDAPAPP 80 (380)
Q Consensus 1 ~~~~a~~~~~~r~~I~~G~lYv~~~~~~~~~R~~ft~~~il~ll~~~p~~lPDvef~~n~~D~P~~~~~~~~g~~~~~~~ 80 (380)
|+|+|+++++||++|++|++||+.|++++|+|++||+|||+|||++|||+|||+||||||+|||++++.+++| + ..|+
T Consensus 156 ~~erak~~a~fr~vI~~g~~yv~~Y~ks~qtrd~ft~wgilqLlr~ypgklPDlElmf~~~D~P~v~~~~~~~-~-~~pp 233 (528)
T KOG2458|consen 156 MAERAKRKAHFRLVIKEGRLYVENYRKSIQTRDVFTIWGILQLLRTYPGKLPDLELMFNCGDWPLVRKKDFQG-T-PPPP 233 (528)
T ss_pred HhhhhhcccceeeeeecCceehhhhhhhhcccchHHHHHHHHHHHhcCCCCCCceeeeecCCccccchhhccC-C-CCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999987 3 4899
Q ss_pred CeeeeccCCCCCceecCCCCCCCCCccccCChHHHHHHhhhccCCCCCCCCCCceeeeeCCCCc-hhHHHHHHhhhhCCC
Q 016930 81 PLFRYCANDQTYDIVFPDWSFWGWPEVNIKSWEPQLKDLEEGNGRIKWSDREPYAYWKGNPTVA-PTRQDLMKCNVSEGQ 159 (380)
Q Consensus 81 Pifs~ck~~~~~DIl~Pd~~fwgwpe~~i~~w~~~~~~i~~~~~~~pW~~K~~~afWRG~~~~~-~~R~~Lv~~~~~~~~ 159 (380)
|||+||++.++.||+||||+||||+|+||++|+.++..|.+||.+.+|.+|.++||||||+++. +.|..|++|+++.-.
T Consensus 234 PlF~yCg~~~s~DIVfPdwsfwgw~e~nik~w~~~~~~~~egn~~~~W~~r~~yAywrGnp~v~e~~rl~ll~cn~s~~~ 313 (528)
T KOG2458|consen 234 PLFSYCGSSESLDIVFPDWSFWGWAEVNIKPWEKLLEDIVEGNKRPKWKNKNPYAYWRGNPSVAERLRLDLLSCNNSELV 313 (528)
T ss_pred CeEeecCCcccccccccCccccCChhhcccccchHHHHHHhhccCCCcccCCceeEecCCCCccccchhhhhhcCCchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999987 899999999977777
Q ss_pred CccceeeehhhhhhhhcCCCCCChhhhcccceeeeecCcccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEec
Q 016930 160 EWNARVFAQDWIKEQQEGYKQSDLASQCRDRFKIYIEGSAWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPIN 239 (380)
Q Consensus 160 ~~~a~i~~~~w~~~~~~g~~~~~l~~~~~yKYli~ieG~~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~ 239 (380)
+|+++++.|+|.+|++.||+.++|++||+|||+|||||.+||+|+||||+|+||+|++++.|+|||+++|+||+|||||+
T Consensus 314 d~~~~~y~qdw~~E~~~G~k~s~l~dqc~hrYkIyiEG~awsvs~kYilacDS~tL~v~p~YydfF~r~l~P~~HYwPIk 393 (528)
T KOG2458|consen 314 DANATLYFQDWSKESKLGFKQSNLFDQCKHRYKIYIEGTAWSVSEKYILACDSMTLKVKPEYYDFFYRGLQPWKHYWPIK 393 (528)
T ss_pred chhhhhHHHhhhhhhhccccccchhhhcceeeEEEEeeeeeeeecceeeecceeEEeecchHHHHHhhcccchhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHHhhcccCCCCCCCccccccccccccCC
Q 016930 240 DHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYVYDYMFHLLNQYSKLLRYQPTVPPEAVEYCAERLACAEE 319 (380)
Q Consensus 240 ~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eYakl~~~~P~~~~~~~e~c~~~~~c~~~ 319 (380)
++ |+||++||+|+|+|+++||.||++|++|+++.|.|++|||||+|||+|||+||+|+|+||+||+|||+|+|+|+++
T Consensus 394 ~~--c~slkfaV~Wgn~h~~~Aq~Igk~gs~f~r~~L~m~~vYdYmfhllqeYakL~k~kpevp~~a~evc~~~m~cp~~ 471 (528)
T KOG2458|consen 394 SN--CRSLKFAVDWGNNHDEEAQKIGKEGSEFARKNLKMDYVYDYMFHLLQEYAKLQKFKPEVPEGATEVCPETMACPED 471 (528)
T ss_pred cc--hhHHHHHHHhcccChHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHhhcCCcCCCCccccCchhccCCcc
Confidence 98 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhhhhhccCCCCCCCCCCCCCCCchHHHHHHHHhhhHHHHHHHHHHHHHhhhh
Q 016930 320 GPARKFMEESLVQSPKETSPCTLPPSYDPSSLNDVLQKKENSILQVESWQRAYWENQT 377 (380)
Q Consensus 320 ~~~~~f~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (380)
|++|+||+||+|+ ||.+.||.|||||+|.+|++|++||+++++|||+||++||++|+
T Consensus 472 g~~r~~m~~slv~-ps~~~pC~~p~p~~~~~l~~~~~~k~~~~~~ve~we~~y~~~~~ 528 (528)
T KOG2458|consen 472 GRERKFMDESLVM-PSDTAPCEMPPPYDPNELKEFLEKKESTTRQVEKWENKYWQKQN 528 (528)
T ss_pred chhhhhhhhcccc-ccccCcccCCCCCCcHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 9999999999998 99999999999999999999999999999999999999999875
No 2
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=100.00 E-value=3.5e-113 Score=863.49 Aligned_cols=368 Identities=51% Similarity=1.045 Sum_probs=356.2
Q ss_pred ChhhhhccCeEEEEEECCEEEEEccccccCCcchhHHHHHHHHHHhCCCCCCCeEEEEecCcccceeccccCCCCCCCCC
Q 016930 1 MVERARKTANFRLVIVKGKAYVETYTKAFQSRDTFTLWGILQLLRRYPGRIPDLDLMFDCVDWPVVLRNAYCAPDAPAPP 80 (380)
Q Consensus 1 ~~~~a~~~~~~r~~I~~G~lYv~~~~~~~~~R~~ft~~~il~ll~~~p~~lPDvef~~n~~D~P~~~~~~~~g~~~~~~~ 80 (380)
|||+|++.|++|++|+||||||+.|++++++|++||+|||+||++++|++||||||+|||+|+|.+.+.++.|.+. +++
T Consensus 28 ~l~~~~~~~~~r~~I~~g~lYv~~~~~~~~tR~~~t~~~l~~ll~~~p~~lPD~Ef~~n~~D~P~~~~~~~~~~~~-~~~ 106 (395)
T PF05686_consen 28 MLDRARRRAMFRYVIKDGRLYVESYREMFQTRDMFTLWGLLQLLRRYPGRLPDVEFMFNCDDWPVVRKDDYQGPSA-PPP 106 (395)
T ss_pred HHHHHHhcCceEEEEECCEEEEEecccccchhHHHHHHHHHHHHHhCcCCCCCeeEEeECCCCccccccccCCCCc-chh
Confidence 5899999999999999999999999999999999999999999999999999999999999999998877655443 799
Q ss_pred CeeeeccCCCCCceecCCCCCCCCCccccCChHHHHHHhhhccCCCCCCCCCCceeeeeCCCCchhHHHHHHhhhhCCCC
Q 016930 81 PLFRYCANDQTYDIVFPDWSFWGWPEVNIKSWEPQLKDLEEGNGRIKWSDREPYAYWKGNPTVAPTRQDLMKCNVSEGQE 160 (380)
Q Consensus 81 Pifs~ck~~~~~DIl~Pd~~fwgwpe~~i~~w~~~~~~i~~~~~~~pW~~K~~~afWRG~~~~~~~R~~Lv~~~~~~~~~ 160 (380)
||||||++.++.|||||||+|||||+++|++|+..+..+.+++..+||++|+|+|||||+++++..|++|++|+++++.+
T Consensus 107 Pifs~~~~~~~~DIl~Pd~~fwgw~e~~i~~w~~~~~~i~~~~~~~pW~~K~p~afWRG~~~~~~~R~~L~~~~~~~~~~ 186 (395)
T PF05686_consen 107 PIFSYCKSSDTADILFPDFSFWGWPEINIGPWDEDRKDIKEGNERVPWEDKKPKAFWRGSPTVAETRQRLVRCSRSHPDL 186 (395)
T ss_pred hheeeccccCcCccccCCccccccccccCCchHHHhhhhhccccCCChhhcccceEECCCcCCCcchhHHHHHhccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999998888899999999888999
Q ss_pred ccceeeehhhhhhhhcCCCCCChhhhcccceeeeecCcccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecC
Q 016930 161 WNARVFAQDWIKEQQEGYKQSDLASQCRDRFKIYIEGSAWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPIND 240 (380)
Q Consensus 161 ~~a~i~~~~w~~~~~~g~~~~~l~~~~~yKYli~ieG~~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~ 240 (380)
|+|+++.++|..+...+++.+++++||+|||+|||||++||+||||||+||||||++++.|+|||+++|+||+|||||+.
T Consensus 187 ~~a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~~S~RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~ 266 (395)
T PF05686_consen 187 WDARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNAWSGRLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKR 266 (395)
T ss_pred ceeeechhhhhhhccccccccCHHHHhhhheeecCCCceeehhHHHHHcCCceEEEeCCcHHHHHHhhhcccccEEEecc
Confidence 99999999999887788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHHhhcccCCCCCCCccccccccccccCCC
Q 016930 241 HDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYVYDYMFHLLNQYSKLLRYQPTVPPEAVEYCAERLACAEEG 320 (380)
Q Consensus 241 d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eYakl~~~~P~~~~~~~e~c~~~~~c~~~~ 320 (380)
+.+|+||+++|+|+++||++|++||++|++|++++|++++++|||++||+|||+||+|+|+++++++|||+|+|+|.++|
T Consensus 267 ~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eYa~l~~~~p~~~~~~~ev~~~~~~~~~~~ 346 (395)
T PF05686_consen 267 DDDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREYLTMEDVYCYWRRLLLEYAKLLRFKPTVPPGAEEVCPESMACPAEG 346 (395)
T ss_pred ccchhhHHHHhhhcccChHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCCCcCCCCceEechhhcCCCccc
Confidence 54599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhccCCCCCCCCCCCCCCCchHHHHHHHHhhhHHHHHHHHH
Q 016930 321 PARKFMEESLVQSPKETSPCTLPPSYDPSSLNDVLQKKENSILQVESWQ 369 (380)
Q Consensus 321 ~~~~f~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (380)
.+++||++|+|++|+++.||+|||||+|++|++|++||+++++|||+||
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (395)
T PF05686_consen 347 RERKFMMESMVKSPSDTDPCTMPPPYDPEELKEFLERKENVIRQVEKWE 395 (395)
T ss_pred chhhHHHHhhccCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999997
No 3
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=100.00 E-value=2.7e-72 Score=536.16 Aligned_cols=248 Identities=57% Similarity=1.162 Sum_probs=230.9
Q ss_pred CCCCeEEEEecCcccceeccccCCCCCCCCCCeeeeccCCCCCceecCCCCCC-CCCccccCChHHHHHHhhhccCCCCC
Q 016930 50 RIPDLDLMFDCVDWPVVLRNAYCAPDAPAPPPLFRYCANDQTYDIVFPDWSFW-GWPEVNIKSWEPQLKDLEEGNGRIKW 128 (380)
Q Consensus 50 ~lPDvef~~n~~D~P~~~~~~~~g~~~~~~~Pifs~ck~~~~~DIl~Pd~~fw-gwpe~~i~~w~~~~~~i~~~~~~~pW 128 (380)
+|||+||+||++|+|.+.+.+..+.+...++||||+||..++.|||||||+|| |||+.++++|+..+..|.+++.++||
T Consensus 1 ~lPD~ef~~n~~D~p~~~~~~~~~~~~~~~~Pifs~~k~~~~~DIl~P~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~pW 80 (256)
T smart00672 1 RVPDLELMFNCRDWPLINKKSFASYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAGWPEVNGRPWDKDLMELEEGNKRTKW 80 (256)
T ss_pred CCCCeeeeeeCCCccccccCCCCCcccCCCCCeEEecCCCCCCceEecCHHHhCCCccccCcchHHHHHHHHhhhcCCCc
Confidence 58999999999999999877654433457899999999999999999999999 99999999999999999998999999
Q ss_pred CCCCCceeeeeCCCCchhHHHHHHhhhhCCCCccceeeehhhh-----hhhhcCCCCCChhhhcccceeeeecCcccccc
Q 016930 129 SDREPYAYWKGNPTVAPTRQDLMKCNVSEGQEWNARVFAQDWI-----KEQQEGYKQSDLASQCRDRFKIYIEGSAWSVS 203 (380)
Q Consensus 129 ~~K~~~afWRG~~~~~~~R~~Lv~~~~~~~~~~~a~i~~~~w~-----~~~~~g~~~~~l~~~~~yKYli~ieG~~~S~r 203 (380)
++|+++|||||+++++.+|++|++++++++..|||+++.++|. .+...+++.+++++||+|||+|++||++||+|
T Consensus 81 ~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~~S~r 160 (256)
T smart00672 81 SDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVAWSVR 160 (256)
T ss_pred cccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCccchhh
Confidence 9999999999999877799999999988888999999988875 23345667799999999999999999999999
Q ss_pred hHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCccc--HHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhH
Q 016930 204 EKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRS--IKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYV 281 (380)
Q Consensus 204 lk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sd--l~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~ 281 (380)
|+++|+||||||++++.|+|||+++|+||+|||||+.|. +| |+++|+|+++||++||+||+||++|++++|+++++
T Consensus 161 l~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~--sd~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~ 238 (256)
T smart00672 161 LKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDL--SCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSMEDV 238 (256)
T ss_pred HHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCC--chhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 999999999999999999999999999999999999985 66 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccC
Q 016930 282 YDYMFHLLNQYSKLLRYQ 299 (380)
Q Consensus 282 ~~Y~~~LL~eYakl~~~~ 299 (380)
+|||++||+|||+||+|+
T Consensus 239 ~~Y~~~ll~eya~l~~~~ 256 (256)
T smart00672 239 YDYMFHLLQEYAKLLKYK 256 (256)
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 999999999999999986
No 4
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.95 E-value=4.9e-05 Score=60.70 Aligned_cols=82 Identities=6% Similarity=0.019 Sum_probs=69.7
Q ss_pred cccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhC
Q 016930 198 SAWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELK 277 (380)
Q Consensus 198 ~~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~ 277 (380)
.+.+.|+--.|+||++||...+ .-+...+.+..|++-++ + .+|+.++++++.+||++.++||++|++++++..+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~-~--~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t 82 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYN-D--PEELAEKIEYLLENPEERRRIAKNARERVLKRHT 82 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEEC-C--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCC
Confidence 4567788889999999999865 44445588899999998 4 4899999999999999999999999999999998
Q ss_pred hhhHHHHH
Q 016930 278 LDYVYDYM 285 (380)
Q Consensus 278 ~~~~~~Y~ 285 (380)
-+.+..++
T Consensus 83 ~~~~~~~i 90 (92)
T PF13524_consen 83 WEHRAEQI 90 (92)
T ss_pred HHHHHHHH
Confidence 87776654
No 5
>PRK10307 putative glycosyl transferase; Provisional
Probab=80.09 E-value=8.5 Score=38.64 Aligned_cols=82 Identities=9% Similarity=0.011 Sum_probs=57.4
Q ss_pred chHHHHhcCCeeeeecCc---chhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChh
Q 016930 203 SEKYILACDSVTLIVTPK---YYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLD 279 (380)
Q Consensus 203 rlk~lL~~~Svvl~~~~~---~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~ 279 (380)
.+--.|+||-.|+..... ..+.. . . +=+=+..++ .++|.++|..+.++++..++++++|++++.+.++.+
T Consensus 323 kl~eama~G~PVi~s~~~g~~~~~~i----~-~-~G~~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~ 395 (412)
T PRK10307 323 KLTNMLASGRNVVATAEPGTELGQLV----E-G-IGVCVEPES-VEALVAAIAALARQALLRPKLGTVAREYAERTLDKE 395 (412)
T ss_pred HHHHHHHcCCCEEEEeCCCchHHHHH----h-C-CcEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 344458899888887532 12211 1 2 212223322 478999999999999999999999999999999988
Q ss_pred hHHHHHHHHHHH
Q 016930 280 YVYDYMFHLLNQ 291 (380)
Q Consensus 280 ~~~~Y~~~LL~e 291 (380)
.+..-+..++++
T Consensus 396 ~~~~~~~~~~~~ 407 (412)
T PRK10307 396 NVLRQFIADIRG 407 (412)
T ss_pred HHHHHHHHHHHH
Confidence 877776555543
No 6
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=79.47 E-value=8.5 Score=35.87 Aligned_cols=86 Identities=9% Similarity=-0.039 Sum_probs=60.9
Q ss_pred cccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhC
Q 016930 198 SAWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELK 277 (380)
Q Consensus 198 ~~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~ 277 (380)
.+++..+---|+||-.|+.... ..+.+.+....+-+-+..++ .+++.+++..+.++++..+++++++++.+.+.++
T Consensus 286 ~~~~~~~~Ea~~~g~pvI~~~~---~~~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03801 286 EGFGLVLLEAMAAGLPVVASDV---GGIPEVVEDGETGLLVPPGD-PEALAEAILRLLDDPELRRRLGEAARERVAERFS 361 (374)
T ss_pred ccccchHHHHHHcCCcEEEeCC---CChhHHhcCCcceEEeCCCC-HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcC
Confidence 3456667777889999998773 22333333344444444432 4789999999999999999999999998889988
Q ss_pred hhhHHHHHHH
Q 016930 278 LDYVYDYMFH 287 (380)
Q Consensus 278 ~~~~~~Y~~~ 287 (380)
.+.+..=+..
T Consensus 362 ~~~~~~~~~~ 371 (374)
T cd03801 362 WDRVAARTEE 371 (374)
T ss_pred HHHHHHHHHH
Confidence 7766554333
No 7
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.90 E-value=8.5 Score=39.10 Aligned_cols=71 Identities=13% Similarity=0.160 Sum_probs=56.2
Q ss_pred ccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHh
Q 016930 199 AWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDE 275 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~ 275 (380)
+.+.|.--+++|+...+ +.|.+-....+.|+.-.+--.+. .|+.++++++.+||+++++||++|-+=+...
T Consensus 275 ~~~~RvFeiagc~~~li---T~~~~~~e~~f~pgk~~iv~~d~---kdl~~~~~yll~h~~erkeiae~~ye~V~~~ 345 (373)
T COG4641 275 SPTNRVFEIAGCGGFLI---TDYWKDLEKFFKPGKDIIVYQDS---KDLKEKLKYLLNHPDERKEIAECAYERVLAR 345 (373)
T ss_pred CchhhHHHHhhcCCccc---cccHHHHHHhcCCchheEEecCH---HHHHHHHHHHhcCcchHHHHHHhhHHHHHHh
Confidence 35788888999998433 35777777778888877755543 7999999999999999999999998765443
No 8
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=78.54 E-value=11 Score=38.44 Aligned_cols=87 Identities=8% Similarity=0.056 Sum_probs=62.9
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccc-cHHHHHHHHHHHHHHHHHhhCh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNS-HKKKAKAMGRAASKFIQDELKL 278 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~-h~~~A~~IA~~g~~f~~~~L~~ 278 (380)
+...+.--|+||-.|+..... -..+.+....+=+-+..++ ..+|.++|..+.+ ++++.++++++|++++.+.++.
T Consensus 317 ~p~~llEAma~G~PVI~t~~~---g~~E~v~~~~~G~lv~~~d-~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 317 IPVALMEAMAVGIPVVSTLHS---GIPELVEADKSGWLVPEND-AQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred ccHHHHHHHhCCCCEEEeCCC---CchhhhcCCCceEEeCCCC-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 445566788999988876532 2233445555544454433 4789999999888 9999999999999999999998
Q ss_pred hhHHHHHHHHHH
Q 016930 279 DYVYDYMFHLLN 290 (380)
Q Consensus 279 ~~~~~Y~~~LL~ 290 (380)
+.+..=+.+++.
T Consensus 393 ~~~~~~l~~~~~ 404 (406)
T PRK15427 393 QVINRELASLLQ 404 (406)
T ss_pred HHHHHHHHHHHh
Confidence 877666666554
No 9
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=76.37 E-value=15 Score=35.56 Aligned_cols=85 Identities=8% Similarity=-0.026 Sum_probs=59.8
Q ss_pred cchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhH
Q 016930 202 VSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYV 281 (380)
Q Consensus 202 ~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~ 281 (380)
..+---|+||-.|+..+.. -..+.+..+..-+-+..++ ..++.+++..+.+++++.++++++|++++.+.++.+.+
T Consensus 285 ~~~~EAma~g~PvI~s~~~---~~~e~i~~~~~G~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~ 360 (371)
T cd04962 285 LAALEAMACGVPVVASNAG---GIPEVVKHGETGFLVDVGD-VEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERI 360 (371)
T ss_pred cHHHHHHHcCCCEEEeCCC---CchhhhcCCCceEEcCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 3455667788888776542 2334445544434344433 57899999988889999999999999999899998877
Q ss_pred HHHHHHHHH
Q 016930 282 YDYMFHLLN 290 (380)
Q Consensus 282 ~~Y~~~LL~ 290 (380)
..-+..+++
T Consensus 361 ~~~~~~~y~ 369 (371)
T cd04962 361 VPQYEALYR 369 (371)
T ss_pred HHHHHHHHH
Confidence 766655543
No 10
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=72.49 E-value=14 Score=35.72 Aligned_cols=82 Identities=10% Similarity=-0.010 Sum_probs=58.1
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLD 279 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~ 279 (380)
++..+--.|+||-.|+..+.. -..+.+.....-+-+..++ .++|.+++..+.++++..++++++|++++.+.++.+
T Consensus 283 ~~~~~~EA~a~G~PvI~s~~~---~~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 283 LPVVLLEAQASGVPVVATRHG---GIPEAVEDGETGLLVPEGD-VAALAAALGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred CchHHHHHHHcCCCEEEeCCC---CchhheecCCeeEEECCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 445566778899988876542 1233344444444444332 478999999888999999999999999999999877
Q ss_pred hHHHHH
Q 016930 280 YVYDYM 285 (380)
Q Consensus 280 ~~~~Y~ 285 (380)
.+..-+
T Consensus 359 ~~~~~l 364 (367)
T cd05844 359 RQTAKL 364 (367)
T ss_pred HHHHHH
Confidence 665543
No 11
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=71.52 E-value=20 Score=33.45 Aligned_cols=81 Identities=12% Similarity=0.051 Sum_probs=57.9
Q ss_pred ccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhCh
Q 016930 199 AWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKL 278 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~ 278 (380)
+++..+---|+||-.|+..+.. -..+.+....+=+-+..++ ..++.+++..+.++++..++++++|++++.+.++.
T Consensus 275 ~~~~~~~Ea~~~G~Pvi~s~~~---~~~~~i~~~~~g~~~~~~~-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 350 (359)
T cd03808 275 GLPRVLLEAMAMGRPVIATDVP---GCREAVIDGVNGFLVPPGD-AEALADAIERLIEDPELRARMGQAARKRAEEEFDE 350 (359)
T ss_pred CcchHHHHHHHcCCCEEEecCC---CchhhhhcCcceEEECCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 4556667778899988886532 1223333344444455443 47899999999999999999999999999898887
Q ss_pred hhHHH
Q 016930 279 DYVYD 283 (380)
Q Consensus 279 ~~~~~ 283 (380)
+.+..
T Consensus 351 ~~~~~ 355 (359)
T cd03808 351 EIVVK 355 (359)
T ss_pred HHHHH
Confidence 76543
No 12
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=70.52 E-value=13 Score=38.07 Aligned_cols=82 Identities=12% Similarity=0.059 Sum_probs=55.5
Q ss_pred chHHHHhcCCeeeeecCc-chhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhH
Q 016930 203 SEKYILACDSVTLIVTPK-YYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYV 281 (380)
Q Consensus 203 rlk~lL~~~Svvl~~~~~-~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~ 281 (380)
-.---|+||-.|+..+.. ..|. +....+=+=+..++ ..+|.++|..+.++++.+++++++|++++.+.++.+.+
T Consensus 356 ~~lEAma~G~PvV~s~~gg~~ei----v~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fsw~~~ 430 (439)
T TIGR02472 356 TLLEAAACGLPIVATDDGGPRDI----IANCRNGLLVDVLD-LEAIASALEDALSDSSQWQLWSRNGIEGVRRHYSWDAH 430 (439)
T ss_pred HHHHHHHhCCCEEEeCCCCcHHH----hcCCCcEEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 355667788888776532 2222 22333222233222 37899999999999999999999999999999998776
Q ss_pred HHHHHHHH
Q 016930 282 YDYMFHLL 289 (380)
Q Consensus 282 ~~Y~~~LL 289 (380)
..=+..+|
T Consensus 431 ~~~~~~l~ 438 (439)
T TIGR02472 431 VEKYLRIL 438 (439)
T ss_pred HHHHHHHh
Confidence 65555544
No 13
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=69.94 E-value=22 Score=33.73 Aligned_cols=79 Identities=10% Similarity=0.033 Sum_probs=56.0
Q ss_pred ccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhCh
Q 016930 199 AWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKL 278 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~ 278 (380)
+++..+-.-|+||-.|+..+... .+.+.....-+-+..++ .+++.+++..+.++++..+++++++.+++++ ++.
T Consensus 281 ~~~~~~~Ea~a~G~PvI~~~~~~----~~~i~~~~~g~~~~~~d-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~ 354 (366)
T cd03822 281 TQSGVLAYAIGFGKPVISTPVGH----AEEVLDGGTGLLVPPGD-PAALAEAIRRLLADPELAQALRARAREYARA-MSW 354 (366)
T ss_pred ccchHHHHHHHcCCCEEecCCCC----hheeeeCCCcEEEcCCC-HHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCH
Confidence 56666777789999998876432 22333333333344332 4789999999999999999999999999987 876
Q ss_pred hhHHH
Q 016930 279 DYVYD 283 (380)
Q Consensus 279 ~~~~~ 283 (380)
+.+..
T Consensus 355 ~~~~~ 359 (366)
T cd03822 355 ERVAE 359 (366)
T ss_pred HHHHH
Confidence 65543
No 14
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=69.69 E-value=29 Score=34.00 Aligned_cols=86 Identities=10% Similarity=-0.080 Sum_probs=57.2
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLD 279 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~ 279 (380)
++..+---|+||-.|+..+.. -..+.+....+=+-+..++ .+++.+++..+.++++..+.++++|++.+.+.++.+
T Consensus 285 ~~~~~lEAma~G~Pvv~s~~~---g~~e~i~~~~~g~~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~ 360 (374)
T TIGR03088 285 ISNTILEAMASGLPVIATAVG---GNPELVQHGVTGALVPPGD-AVALARALQPYVSDPAARRAHGAAGRARAEQQFSIN 360 (374)
T ss_pred CchHHHHHHHcCCCEEEcCCC---CcHHHhcCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 344455567888888776531 1122233333323343332 478999999998999999999999999999999988
Q ss_pred hHHHHHHHHH
Q 016930 280 YVYDYMFHLL 289 (380)
Q Consensus 280 ~~~~Y~~~LL 289 (380)
.+..-+..+.
T Consensus 361 ~~~~~~~~~y 370 (374)
T TIGR03088 361 AMVAAYAGLY 370 (374)
T ss_pred HHHHHHHHHH
Confidence 7665554444
No 15
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=69.64 E-value=15 Score=34.66 Aligned_cols=78 Identities=8% Similarity=-0.003 Sum_probs=53.7
Q ss_pred ccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhh
Q 016930 201 SVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDY 280 (380)
Q Consensus 201 S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~ 280 (380)
+..+---|+||-.|+..+.... ...+.....-.-+..++ .+++.++|.-+.+++++.++++++|++++.+..+.+.
T Consensus 313 p~~~~Ea~~~G~pvi~~~~~~~---~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 388 (394)
T cd03794 313 PSKLFEYMAAGKPVLASVDGES---AELVEEAGAGLVVPPGD-PEALAAAILELLDDPEERAEMGENGRRYVEEKFSREK 388 (394)
T ss_pred chHHHHHHHCCCcEEEecCCCc---hhhhccCCcceEeCCCC-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHHH
Confidence 4445567888988888764322 22222323323333322 4789999999889999999999999999998888776
Q ss_pred HH
Q 016930 281 VY 282 (380)
Q Consensus 281 ~~ 282 (380)
+.
T Consensus 389 ~~ 390 (394)
T cd03794 389 LA 390 (394)
T ss_pred HH
Confidence 54
No 16
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=68.79 E-value=25 Score=32.91 Aligned_cols=78 Identities=12% Similarity=0.103 Sum_probs=54.8
Q ss_pred ccccchHHHHhcCCeeeeecCcc-hhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhC
Q 016930 199 AWSVSEKYILACDSVTLIVTPKY-YDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELK 277 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~~-~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~ 277 (380)
+++..+-=-|+||-.|+..+... .++..+ .--.+ ..++ .+++.+++..+.+++++.+++++++.+++++.++
T Consensus 280 ~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----~g~~~--~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 352 (365)
T cd03807 280 GFPNVLLEAMACGLPVVATDVGDNAELVGD----TGFLV--PPGD-PEALAEAIEALLADPALRQALGEAARERIEENFS 352 (365)
T ss_pred cCCcHHHHHHhcCCCEEEcCCCChHHHhhc----CCEEe--CCCC-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCC
Confidence 45566667788888888865432 233332 11222 2222 4789999999999999999999999999999998
Q ss_pred hhhHHH
Q 016930 278 LDYVYD 283 (380)
Q Consensus 278 ~~~~~~ 283 (380)
.+.+..
T Consensus 353 ~~~~~~ 358 (365)
T cd03807 353 IEAMVE 358 (365)
T ss_pred HHHHHH
Confidence 776544
No 17
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=68.62 E-value=23 Score=34.73 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=53.0
Q ss_pred HHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCc------ccHHHHHHhccccHHHHHHHHHHHHHHHHHhhCh
Q 016930 205 KYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKC------RSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKL 278 (380)
Q Consensus 205 k~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~------sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~ 278 (380)
.--|+||-.|+..+.. -..+.+.....-+-+..++ . .+|.++|..+.+++++.++++++|++.+.+.++.
T Consensus 298 lEA~a~G~PvI~s~~~---~~~e~i~~~~~G~~~~~~~-~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 373 (388)
T TIGR02149 298 LEAMACGTPVVASATG---GIPEVVVDGETGFLVPPDN-SDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSW 373 (388)
T ss_pred HHHHHcCCCEEEeCCC---CHHHHhhCCCceEEcCCCC-CcccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 4557788888876532 2223344444333444332 2 5789999988899999999999999999988887
Q ss_pred hhHHHHH
Q 016930 279 DYVYDYM 285 (380)
Q Consensus 279 ~~~~~Y~ 285 (380)
+.+..-+
T Consensus 374 ~~~~~~~ 380 (388)
T TIGR02149 374 GSIAKKT 380 (388)
T ss_pred HHHHHHH
Confidence 7665433
No 18
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=67.97 E-value=26 Score=35.00 Aligned_cols=83 Identities=11% Similarity=0.039 Sum_probs=59.4
Q ss_pred ccccchHHHHhcCCeeeeecCcchhhhhccc--CCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhh
Q 016930 199 AWSVSEKYILACDSVTLIVTPKYYDFYTRGL--MPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDEL 276 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L--~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L 276 (380)
+....+---|+||-.|+..... ...+ ....+++- ..| ..++.++|..+.++++..++++++|++++.+..
T Consensus 310 G~~~~~lEAma~G~PVV~t~~~-----~~~i~~~~~~g~lv-~~~--~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~f 381 (397)
T TIGR03087 310 GIQNKVLEAMAMAKPVVASPEA-----AEGIDALPGAELLV-AAD--PADFAAAILALLANPAEREELGQAARRRVLQHY 381 (397)
T ss_pred CcccHHHHHHHcCCCEEecCcc-----cccccccCCcceEe-CCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhC
Confidence 3444566778899988886531 1122 24456653 344 478999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHH
Q 016930 277 KLDYVYDYMFHLL 289 (380)
Q Consensus 277 ~~~~~~~Y~~~LL 289 (380)
+.+.+..-+..+|
T Consensus 382 sw~~~~~~~~~~l 394 (397)
T TIGR03087 382 HWPRNLARLDALL 394 (397)
T ss_pred CHHHHHHHHHHHh
Confidence 8776665555444
No 19
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=66.79 E-value=29 Score=33.23 Aligned_cols=81 Identities=12% Similarity=0.134 Sum_probs=54.0
Q ss_pred cccchHHHHhcCCeeeeecCc-chhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhCh
Q 016930 200 WSVSEKYILACDSVTLIVTPK-YYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKL 278 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~-~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~ 278 (380)
++..+---|+||-.|+..+.. ..| .+.....=+.+..++ ..++.+++..+.+++++.+++++++++++.+..+.
T Consensus 277 ~g~~~~Eam~~g~PvI~~~~~~~~e----~~~~~~~g~~~~~~~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~ 351 (365)
T cd03825 277 FPNTAIEALACGTPVVAFDVGGIPD----IVDHGVTGYLAKPGD-PEDLAEGIEWLLADPDEREELGEAARELAENEFDS 351 (365)
T ss_pred ccHHHHHHHhcCCCEEEecCCCChh----heeCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 445556678888888876532 222 222222223343332 47899999998899999999999999999888886
Q ss_pred hhHHHHH
Q 016930 279 DYVYDYM 285 (380)
Q Consensus 279 ~~~~~Y~ 285 (380)
+.+..=+
T Consensus 352 ~~~~~~~ 358 (365)
T cd03825 352 RVQAKRY 358 (365)
T ss_pred HHHHHHH
Confidence 6554433
No 20
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=66.61 E-value=16 Score=31.40 Aligned_cols=69 Identities=10% Similarity=0.064 Sum_probs=49.7
Q ss_pred ccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHH
Q 016930 199 AWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKF 271 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f 271 (380)
+++..+---|+||.+||... ...+.+.+.+..+-+-+...+ -.++.++|.-+.++++..+.++++|+++
T Consensus 104 ~~~~~~~Ea~~~g~pvI~~~---~~~~~e~~~~~~~g~~~~~~~-~~~l~~~i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 104 GFGLSLLEAMACGCPVIASD---IGGNNEIINDGVNGFLFDPND-IEELADAIEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp SS-HHHHHHHHTT-EEEEES---STHHHHHSGTTTSEEEESTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeecc---ccCCceeeccccceEEeCCCC-HHHHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 45556677889999999876 344445555666444444332 4799999999999999999999999875
No 21
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=66.31 E-value=16 Score=34.92 Aligned_cols=78 Identities=10% Similarity=-0.001 Sum_probs=52.2
Q ss_pred cccchHHHHhcCCeeeeecCc-chhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhCh
Q 016930 200 WSVSEKYILACDSVTLIVTPK-YYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKL 278 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~-~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~ 278 (380)
++..+---|+||-.|+..+.. ..+.... ....=.-+..++ .+++.++|..+.+++++.++++++|++++.++.+.
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~~~~~~d-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGLVVPPGD-PAALAEAIRRLLEDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhh---CCCceEEeCCCC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcch
Confidence 334455567888888876532 1222211 122222233332 57899999999999999999999999999999887
Q ss_pred hhH
Q 016930 279 DYV 281 (380)
Q Consensus 279 ~~~ 281 (380)
+.+
T Consensus 354 ~~~ 356 (357)
T cd03795 354 DRM 356 (357)
T ss_pred Hhh
Confidence 643
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=64.63 E-value=30 Score=34.59 Aligned_cols=84 Identities=12% Similarity=0.056 Sum_probs=56.7
Q ss_pred hHHHHhcCCeeeeecCcchhhhhcccCCcce-EEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhHH
Q 016930 204 EKYILACDSVTLIVTPKYYDFYTRGLMPLHH-YWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYVY 282 (380)
Q Consensus 204 lk~lL~~~Svvl~~~~~~~e~f~~~L~P~~H-YvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~~ 282 (380)
+---|+||-.|+..... -..+.+....+ |+=+..++ .++|.+++..+.++++. ++++++|++.+.+.++.+.+.
T Consensus 294 ~lEAma~G~PVI~s~~g---g~~Eiv~~~~~G~~l~~~~d-~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~~fsw~~~a 368 (380)
T PRK15484 294 AVEAMAAGKPVLASTKG---GITEFVLEGITGYHLAEPMT-SDSIISDINRTLADPEL-TQIAEQAKDFVFSKYSWEGVT 368 (380)
T ss_pred HHHHHHcCCCEEEeCCC---CcHhhcccCCceEEEeCCCC-HHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHhCCHHHHH
Confidence 44557788777776531 12223333332 21122222 47899999999888875 789999999999999988888
Q ss_pred HHHHHHHHHH
Q 016930 283 DYMFHLLNQY 292 (380)
Q Consensus 283 ~Y~~~LL~eY 292 (380)
.=+.++|..|
T Consensus 369 ~~~~~~l~~~ 378 (380)
T PRK15484 369 QRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHh
Confidence 7777777766
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=63.62 E-value=37 Score=33.89 Aligned_cols=75 Identities=13% Similarity=-0.041 Sum_probs=53.1
Q ss_pred chHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhH
Q 016930 203 SEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYV 281 (380)
Q Consensus 203 rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~ 281 (380)
.+---|+||-.|+..+.. -..+.+....+=+-+..++ -.+|.++|..+.++++..++++++|++.+.++++.+.+
T Consensus 316 ~llEAmA~G~PVIas~~~---g~~e~i~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~ 390 (396)
T cd03818 316 SLLEAMACGCLVVGSDTA---PVREVITDGENGLLVDFFD-PDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVC 390 (396)
T ss_pred HHHHHHHCCCCEEEcCCC---CchhhcccCCceEEcCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHH
Confidence 355668899998887642 2223344444433343322 47899999999999999999999999999988886543
No 24
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=62.08 E-value=43 Score=31.53 Aligned_cols=72 Identities=7% Similarity=-0.101 Sum_probs=54.4
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDEL 276 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L 276 (380)
++..+---|+||-.|+.... ..+.+.+....+-.-+..++ .++.+++..+.++++..+++++++++++.++.
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~---~~~~~~i~~~~~g~~~~~~~--~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDA---PGLPDLVADGENGFLFPPGD--EALAEALLRLLQDPELRRRLSKNAEESAEKFS 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCC---CChhhheecCceeEEeCCCC--HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 44556667889999988664 23445556666666666553 28999999999999999999999999987765
No 25
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=61.95 E-value=24 Score=33.63 Aligned_cols=78 Identities=10% Similarity=-0.011 Sum_probs=55.0
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLD 279 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~ 279 (380)
++..+---|+||-.|+..... ...+.+.....=+-+..++ .+++.+++..+.++++..++++++|++++.+.++.+
T Consensus 274 ~~~~~~Ea~a~G~Pvi~~~~~---~~~~~i~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~ 349 (355)
T cd03799 274 LPVVLMEAMAMGLPVISTDVS---GIPELVEDGETGLLVPPGD-PEALADAIERLLDDPELRREMGEAGRARVEEEFDIR 349 (355)
T ss_pred ccHHHHHHHHcCCCEEecCCC---CcchhhhCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 455556677888888876532 2233444443333344432 578999999999999999999999999999888876
Q ss_pred hH
Q 016930 280 YV 281 (380)
Q Consensus 280 ~~ 281 (380)
.+
T Consensus 350 ~~ 351 (355)
T cd03799 350 KQ 351 (355)
T ss_pred HH
Confidence 54
No 26
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=61.61 E-value=38 Score=33.37 Aligned_cols=81 Identities=6% Similarity=-0.013 Sum_probs=53.4
Q ss_pred chHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhHH
Q 016930 203 SEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYVY 282 (380)
Q Consensus 203 rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~~ 282 (380)
.+---|+||-.|+..+..- ..+.+..+..-+-+... +++.+++..+.++++..++++++|.+.+.+.++.+.+.
T Consensus 289 ~~lEA~a~G~Pvv~s~~~~---~~~~i~~~~~g~~~~~~---~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~ 362 (372)
T cd03792 289 TVTEALWKGKPVIAGPVGG---IPLQIEDGETGFLVDTV---EEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHL 362 (372)
T ss_pred HHHHHHHcCCCEEEcCCCC---chhhcccCCceEEeCCc---HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 3445667777666654221 12234445545545432 56778888888899999999999999998888877766
Q ss_pred HHHHHHH
Q 016930 283 DYMFHLL 289 (380)
Q Consensus 283 ~Y~~~LL 289 (380)
.=|..++
T Consensus 363 ~~~~~~~ 369 (372)
T cd03792 363 KDYLYLI 369 (372)
T ss_pred HHHHHHH
Confidence 5444443
No 27
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=60.55 E-value=15 Score=37.11 Aligned_cols=68 Identities=12% Similarity=0.154 Sum_probs=44.3
Q ss_pred hHHHHhcCCeeeeecC--cchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHh
Q 016930 204 EKYILACDSVTLIVTP--KYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDE 275 (380)
Q Consensus 204 lk~lL~~~Svvl~~~~--~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~ 275 (380)
.---|+||..|+.... .+.+-. ..+...---+++. | .++|.+++..+.++++.+++++++|++++.++
T Consensus 337 ~lEAma~G~PVI~g~~~~~~~e~~-~~~~~~g~~~~~~-d--~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 337 PLEPAAFGVPVISGPHTFNFKEIF-ERLLQAGAAIQVE-D--AEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred HHHHHHhCCCEEECCCccCHHHHH-HHHHHCCCeEEEC-C--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC
Confidence 3456778887776431 122222 1222222233433 2 37899999999999999999999999999776
No 28
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=59.97 E-value=41 Score=32.03 Aligned_cols=126 Identities=17% Similarity=0.230 Sum_probs=76.1
Q ss_pred CCceecCCCCCCCCCccccCChHHHHHHhhhccCCCCCCCCCCceeeeeCCCCc------hhHHHHHHhhhhCCCCccce
Q 016930 91 TYDIVFPDWSFWGWPEVNIKSWEPQLKDLEEGNGRIKWSDREPYAYWKGNPTVA------PTRQDLMKCNVSEGQEWNAR 164 (380)
Q Consensus 91 ~~DIl~Pd~~fwgwpe~~i~~w~~~~~~i~~~~~~~pW~~K~~~afWRG~~~~~------~~R~~Lv~~~~~~~~~~~a~ 164 (380)
..||++|.+.... ....+.. ....+..+|.-.++++|+.... ..|..|+..-...+. +..
T Consensus 152 ~~Di~~P~~~~~~----~~~~~~~--------~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~~-~~~- 217 (302)
T PF03016_consen 152 GFDIVIPPFVPPS----SLPDWRP--------WPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDPD-FRC- 217 (302)
T ss_pred CCCeecccccccc----ccCCccc--------cccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCCc-cee-
Confidence 5789999985421 1111110 0245677899999999997542 468888764322221 111
Q ss_pred eeehhhhhhhhcCCCCCChhhhcccceeeeecCcc-cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEE
Q 016930 165 VFAQDWIKEQQEGYKQSDLASQCRDRFKIYIEGSA-WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYW 236 (380)
Q Consensus 165 i~~~~w~~~~~~g~~~~~l~~~~~yKYli~ieG~~-~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYv 236 (380)
...... . .-...-.+...+-||-+...|.+ +|.||-=-|++|++.+.....+..=|.+.| +|.-+.
T Consensus 218 -~~~~~~---~-~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l-dw~~fs 284 (302)
T PF03016_consen 218 -SDGSET---C-PSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVL-DWSRFS 284 (302)
T ss_pred -eecccc---c-ccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCccccc-CHHHEE
Confidence 110000 0 00011245667889999999997 899999999999999988665554455555 565554
No 29
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=59.81 E-value=32 Score=32.96 Aligned_cols=81 Identities=16% Similarity=0.092 Sum_probs=54.6
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLD 279 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~ 279 (380)
++..+---|+||-.|+..+.. -..+.+.....+++ .+ +++.+++..+.++++..++++++|++.+.+.++.+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~---~~~e~~~~~g~~~~--~~---~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNP---FNREVLGDKAIYFK--VG---DDLASLLEELEADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCC---ccceeecCCeeEec--Cc---hHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 444466678888888876532 11222322333332 22 23999999999999999999999999998888877
Q ss_pred hHHHHHHHH
Q 016930 280 YVYDYMFHL 288 (380)
Q Consensus 280 ~~~~Y~~~L 288 (380)
.+..=+..+
T Consensus 353 ~~~~~~~~~ 361 (363)
T cd04955 353 KIADQYEEL 361 (363)
T ss_pred HHHHHHHHH
Confidence 665544333
No 30
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=49.20 E-value=40 Score=33.05 Aligned_cols=74 Identities=8% Similarity=-0.048 Sum_probs=53.9
Q ss_pred hHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhHH
Q 016930 204 EKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYVY 282 (380)
Q Consensus 204 lk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~~ 282 (380)
.---|+||-.|+..+... ..+.+..+..-+-+..| -.++.+++..+.++++..++++++|.+++.+..+.+.+.
T Consensus 316 ~lEAma~G~PvI~s~~~~---~~e~i~~~~~g~~~~~~--~~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~ 389 (392)
T cd03805 316 PLEAMYAGKPVIACNSGG---PLETVVDGETGFLCEPT--PEEFAEAMLKLANDPDLADRMGAAGRKRVKEKFSTEAFA 389 (392)
T ss_pred HHHHHHcCCCEEEECCCC---cHHHhccCCceEEeCCC--HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhcCHHHHh
Confidence 345678999888876432 22334454544435444 378999999999999999999999999999988877654
No 31
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=48.70 E-value=71 Score=29.75 Aligned_cols=86 Identities=12% Similarity=0.073 Sum_probs=57.5
Q ss_pred ccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhCh
Q 016930 199 AWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKL 278 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~ 278 (380)
+++..+---|+||..|+..+... ..+.+.....=+-+..++ ..++.+++..+.++++. +++.+++..+.+.++.
T Consensus 290 ~~~~~~~Ea~~~G~pvI~~~~~~---~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~ 363 (377)
T cd03798 290 GFGLVLLEAMACGLPVVATDVGG---IPEIITDGENGLLVPPGD-PEALAEAILRLLADPWL--RLGRAARRRVAERFSW 363 (377)
T ss_pred cCChHHHHHHhcCCCEEEecCCC---hHHHhcCCcceeEECCCC-HHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhH
Confidence 45666777788999998865422 223344444322334332 47899999999888877 7888899988888887
Q ss_pred hhHHHHHHHHHH
Q 016930 279 DYVYDYMFHLLN 290 (380)
Q Consensus 279 ~~~~~Y~~~LL~ 290 (380)
+.+..-+..++.
T Consensus 364 ~~~~~~~~~~~~ 375 (377)
T cd03798 364 ENVAERLLELYR 375 (377)
T ss_pred HHHHHHHHHHHh
Confidence 766555544443
No 32
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=47.29 E-value=77 Score=29.72 Aligned_cols=77 Identities=12% Similarity=0.229 Sum_probs=53.1
Q ss_pred ccccchHHHHhcCCeeeeecCc-chhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhC
Q 016930 199 AWSVSEKYILACDSVTLIVTPK-YYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELK 277 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~-~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~ 277 (380)
+++..+---|+||-.|+..+.. ..+... ....++ +..+ -+++.+++..+.+++++.+.+++++.+++.+.++
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~----~~~~~~-~~~~--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 365 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIE----YGCGWV-VDDD--VDALAAALRRALELPQRLKAMGENGRALVEERFS 365 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhh----cCceEE-eCCC--hHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 3445556678899888886532 222222 222232 2233 2789999999999999999999999999988888
Q ss_pred hhhHH
Q 016930 278 LDYVY 282 (380)
Q Consensus 278 ~~~~~ 282 (380)
.+.+.
T Consensus 366 ~~~~~ 370 (375)
T cd03821 366 WTAIA 370 (375)
T ss_pred HHHHH
Confidence 76553
No 33
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=46.35 E-value=82 Score=29.50 Aligned_cols=73 Identities=5% Similarity=-0.118 Sum_probs=48.7
Q ss_pred cccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHH
Q 016930 198 SAWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQD 274 (380)
Q Consensus 198 ~~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~ 274 (380)
-+++..+---|+||-.|+..+... ..+.+.....=+-+..++ ..++.+++..+.++++..+.+++++++....
T Consensus 274 e~~~~~~~Ea~a~G~Pvi~~~~~~---~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 346 (359)
T cd03823 274 ENFPLVIREALAAGVPVIASDIGG---MAELVRDGVNGLLFPPGD-AEDLAAALERLIDDPDLLERLRAGIEPPRSI 346 (359)
T ss_pred CCCChHHHHHHHCCCCEEECCCCC---HHHHhcCCCcEEEECCCC-HHHHHHHHHHHHhChHHHHHHHHhHHHhhhH
Confidence 345555666788999888876432 222333332223333332 4789999999999999999999999887654
No 34
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=45.05 E-value=71 Score=31.05 Aligned_cols=76 Identities=9% Similarity=-0.017 Sum_probs=51.3
Q ss_pred hHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhHHH
Q 016930 204 EKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYVYD 283 (380)
Q Consensus 204 lk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~~~ 283 (380)
+-=-|+||-.||..+.. ...+.+.....=+-+..++ ..++.++|..+.+++++.++++++|++++.+.++.+.+..
T Consensus 319 l~Ea~a~G~Pvi~s~~~---~~~e~i~~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~ 394 (398)
T cd03800 319 ALEAMACGLPVVATAVG---GPRDIVVDGVTGLLVDPRD-PEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAA 394 (398)
T ss_pred HHHHHhcCCCEEECCCC---CHHHHccCCCCeEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 44557788777765432 2223333333323333322 4789999998889999999999999999988888776544
No 35
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=45.05 E-value=1.1e+02 Score=30.14 Aligned_cols=85 Identities=12% Similarity=0.028 Sum_probs=55.8
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLD 279 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~ 279 (380)
++..+---|+||-.|+..+.. .....+.....-+.+..++ .+++.++|..+.++++..++++++|.+++ +.++.+
T Consensus 315 ~g~~~lEAma~G~Pvi~~~~~---~~~e~i~~~~~g~~~~~~d-~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~~fsw~ 389 (405)
T TIGR03449 315 FGLVAMEAQACGTPVVAARVG---GLPVAVADGETGLLVDGHD-PADWADALARLLDDPRTRIRMGAAAVEHA-AGFSWA 389 (405)
T ss_pred cChHHHHHHHcCCCEEEecCC---CcHhhhccCCceEECCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHH
Confidence 344466677788888776532 1222334445555555433 47899999988889999999999999987 457766
Q ss_pred hHHHHHHHHH
Q 016930 280 YVYDYMFHLL 289 (380)
Q Consensus 280 ~~~~Y~~~LL 289 (380)
.+..=+..++
T Consensus 390 ~~~~~~~~~y 399 (405)
T TIGR03449 390 ATADGLLSSY 399 (405)
T ss_pred HHHHHHHHHH
Confidence 6554433333
No 36
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=43.53 E-value=1.1e+02 Score=31.80 Aligned_cols=81 Identities=11% Similarity=-0.029 Sum_probs=51.7
Q ss_pred cccchHHHHhcCCeeeeecCc-chhhhhcccCC---cceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHh
Q 016930 200 WSVSEKYILACDSVTLIVTPK-YYDFYTRGLMP---LHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDE 275 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~-~~e~f~~~L~P---~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~ 275 (380)
++..+-=-|+||-.|+..+.. ..|...+. .. +..=+=+..++ .++|.+++..+.++++..++++++|++.+.++
T Consensus 383 ~p~~vlEAma~G~PVVatd~g~~~elv~~~-~~~~~g~~G~lv~~~d-~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~ 460 (475)
T cd03813 383 QPLVILEAMAAGIPVVATDVGSCRELIEGA-DDEALGPAGEVVPPAD-PEALARAILRLLKDPELRRAMGEAGRKRVERY 460 (475)
T ss_pred CChHHHHHHHcCCCEEECCCCChHHHhcCC-cccccCCceEEECCCC-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 334455667888888875432 22322220 00 11111222222 47899999999999999999999999999998
Q ss_pred hChhhHH
Q 016930 276 LKLDYVY 282 (380)
Q Consensus 276 L~~~~~~ 282 (380)
.+.+.+.
T Consensus 461 ~s~~~~~ 467 (475)
T cd03813 461 YTLERMI 467 (475)
T ss_pred CCHHHHH
Confidence 8865443
No 37
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=42.08 E-value=76 Score=32.09 Aligned_cols=80 Identities=6% Similarity=-0.075 Sum_probs=54.5
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLD 279 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~ 279 (380)
.+..+---|+||-.|+..+.. -..+.+....+=+-+..+..-+++.++|..+.++++..++++++|++++.+.++.+
T Consensus 323 ~p~~llEAma~G~PVIas~vg---g~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~ 399 (407)
T cd04946 323 LPVSIMEAMSFGIPVIATNVG---GTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNAS 399 (407)
T ss_pred ccHHHHHHHHcCCCEEeCCCC---CcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 445566788899888876532 12233444432222222111478999999998899999999999999999999877
Q ss_pred hHH
Q 016930 280 YVY 282 (380)
Q Consensus 280 ~~~ 282 (380)
..+
T Consensus 400 ~~~ 402 (407)
T cd04946 400 KNY 402 (407)
T ss_pred HhH
Confidence 554
No 38
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=41.86 E-value=1e+02 Score=29.01 Aligned_cols=78 Identities=6% Similarity=-0.090 Sum_probs=53.1
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLD 279 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~ 279 (380)
++..+---|+||-.||..... -..+.+.....-+-+..++ ..++.+++..+.+|++..+++++++.+++ +..+.+
T Consensus 279 ~~~~~lEa~a~g~PvI~~~~~---~~~~~i~~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~ 353 (364)
T cd03814 279 FGLVVLEAMASGLPVVAPDAG---GPADIVTDGENGLLVEPGD-AEAFAAALAALLADPELRRRMAARARAEA-ERRSWE 353 (364)
T ss_pred CCcHHHHHHHcCCCEEEcCCC---CchhhhcCCcceEEcCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hhcCHH
Confidence 445566778899999887643 2333444433333344332 35688999999999999999999999988 556655
Q ss_pred hHH
Q 016930 280 YVY 282 (380)
Q Consensus 280 ~~~ 282 (380)
.+.
T Consensus 354 ~~~ 356 (364)
T cd03814 354 AFL 356 (364)
T ss_pred HHH
Confidence 543
No 39
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=36.41 E-value=1.1e+02 Score=31.43 Aligned_cols=36 Identities=11% Similarity=0.016 Sum_probs=29.6
Q ss_pred cccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhh
Q 016930 244 CRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDY 280 (380)
Q Consensus 244 ~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~ 280 (380)
-.++.++|..+.++++..++++++|++.+. .++-+.
T Consensus 387 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-~fsw~~ 422 (465)
T PLN02871 387 VDDCVEKLETLLADPELRERMGAAAREEVE-KWDWRA 422 (465)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-hCCHHH
Confidence 478999999999999999999999999885 455443
No 40
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=35.17 E-value=78 Score=29.89 Aligned_cols=75 Identities=5% Similarity=-0.001 Sum_probs=50.1
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLD 279 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~ 279 (380)
++..+---|++|-.|+..... -+.+.+.....+++.. + ..++.+++..+.++++..++++++|.+++ +..+.+
T Consensus 285 ~~~~~~Ea~a~G~pvI~~~~~---~~~e~~~~~~~~~~~~-~--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~-~~~sw~ 357 (365)
T cd03809 285 FGLPVLEAMACGTPVIASNIS---SLPEVAGDAALYFDPL-D--PEALAAAIERLLEDPALREELRERGLARA-KRFSWE 357 (365)
T ss_pred CCCCHHHHhcCCCcEEecCCC---CccceecCceeeeCCC-C--HHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HhCCHH
Confidence 455566678889888876542 2222233333344333 2 47899999999999999999999999766 446654
Q ss_pred hH
Q 016930 280 YV 281 (380)
Q Consensus 280 ~~ 281 (380)
.+
T Consensus 358 ~~ 359 (365)
T cd03809 358 KT 359 (365)
T ss_pred HH
Confidence 43
No 41
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=34.20 E-value=1.1e+02 Score=29.16 Aligned_cols=77 Identities=10% Similarity=-0.028 Sum_probs=49.7
Q ss_pred ccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHH-HhccccHHHHHHHHHHHHHHHHHhhC
Q 016930 199 AWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAV-DWGNSHKKKAKAMGRAASKFIQDELK 277 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v-~w~~~h~~~A~~IA~~g~~f~~~~L~ 277 (380)
+++..+--.|+||-.|+..+.. -..+.+.....-+-+..++ ..++.++| ..+..++++.++++++|++++.++.+
T Consensus 276 ~~~~~l~EA~a~G~PvI~~~~~---~~~e~i~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~ 351 (355)
T cd03819 276 AFGRTAVEAQAMGRPVIASDHG---GARETVRPGETGLLVPPGD-AEALAQALDQILSLLPEGRAKMFAKARMCVETLFS 351 (355)
T ss_pred CCchHHHHHHhcCCCEEEcCCC---CcHHHHhCCCceEEeCCCC-HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhh
Confidence 3444556677888888776532 1222233332222233332 47899999 46777899999999999999988876
Q ss_pred hh
Q 016930 278 LD 279 (380)
Q Consensus 278 ~~ 279 (380)
.+
T Consensus 352 ~~ 353 (355)
T cd03819 352 YD 353 (355)
T ss_pred hc
Confidence 54
No 42
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=33.33 E-value=83 Score=31.88 Aligned_cols=75 Identities=8% Similarity=-0.036 Sum_probs=52.1
Q ss_pred CcccccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhcccc---HHHHHHHHHHHHHHHH
Q 016930 197 GSAWSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSH---KKKAKAMGRAASKFIQ 273 (380)
Q Consensus 197 G~~~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h---~~~A~~IA~~g~~f~~ 273 (380)
|.+.+..+--.|+||-.|+..... -..+.+.....=+-+. | ..+|.+++..+.++ +++.++++++|+++.+
T Consensus 327 ~~~~p~~~~Eama~G~PVI~s~~~---~~~eiv~~~~~G~lv~-d--~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 327 GLDLPMKVVDMFGCGLPVCALDFK---CIDELVKHGENGLVFG-D--SEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred ccCCcHHHHHHHHcCCCEEEeCCC---CHHHHhcCCCCEEEEC-C--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 334555566678999999886532 1223444444444443 4 58999999998888 9999999999999986
Q ss_pred HhhC
Q 016930 274 DELK 277 (380)
Q Consensus 274 ~~L~ 277 (380)
+...
T Consensus 401 ~~~~ 404 (415)
T cd03816 401 LRWD 404 (415)
T ss_pred cCHH
Confidence 6554
No 43
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=31.75 E-value=1.6e+02 Score=27.00 Aligned_cols=79 Identities=9% Similarity=-0.032 Sum_probs=51.0
Q ss_pred ccccchHHHHhcCCeeeeecCc-chhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhC
Q 016930 199 AWSVSEKYILACDSVTLIVTPK-YYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELK 277 (380)
Q Consensus 199 ~~S~rlk~lL~~~Svvl~~~~~-~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~ 277 (380)
+++..+---|+||-.|+..+.. ..+. .+.....=+-++..+ .+++.+++..+.++++..++++++|++++ +.++
T Consensus 264 ~~~~~~~Ea~a~G~Pvi~~~~~~~~~~---~~~~~~~g~~~~~~~-~~~~~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFGLPVISFDCPTGPSE---IIEDGVNGLLVPNGD-VEALAEALLRLMEDEELRKRMGANARESA-ERFS 338 (348)
T ss_pred ccCHHHHHHHHcCCCEEEecCCCchHh---hhccCcceEEeCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-HHhC
Confidence 3455567778899998876532 1111 122222223334332 47899999999999999999999997776 5566
Q ss_pred hhhHH
Q 016930 278 LDYVY 282 (380)
Q Consensus 278 ~~~~~ 282 (380)
.+.+.
T Consensus 339 ~~~~~ 343 (348)
T cd03820 339 IENII 343 (348)
T ss_pred HHHHH
Confidence 55543
No 44
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=28.79 E-value=2e+02 Score=32.40 Aligned_cols=80 Identities=6% Similarity=-0.072 Sum_probs=48.8
Q ss_pred HHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhc----cccHHHHHHHHHHHHHHHHHhhChhhH
Q 016930 206 YILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWG----NSHKKKAKAMGRAASKFIQDELKLDYV 281 (380)
Q Consensus 206 ~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~----~~h~~~A~~IA~~g~~f~~~~L~~~~~ 281 (380)
--|+||-.|+....- =.-+.+...+.=.-|...+ ..++.+++..+ .++++..++|+++|.+.+.+..+-+.+
T Consensus 662 EAMAcGlPVVAT~~G---G~~EiV~dg~tGfLVdp~D-~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~ 737 (784)
T TIGR02470 662 EAMTCGLPTFATRFG---GPLEIIQDGVSGFHIDPYH-GEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIY 737 (784)
T ss_pred HHHHcCCCEEEcCCC---CHHHHhcCCCcEEEeCCCC-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 456677766665421 0112233444333344432 46777777654 478999999999999988888776655
Q ss_pred HHHHHHHH
Q 016930 282 YDYMFHLL 289 (380)
Q Consensus 282 ~~Y~~~LL 289 (380)
..=+..|+
T Consensus 738 A~~ll~l~ 745 (784)
T TIGR02470 738 SERLLTLA 745 (784)
T ss_pred HHHHHHHH
Confidence 55444444
No 45
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=28.36 E-value=2.4e+02 Score=26.69 Aligned_cols=83 Identities=10% Similarity=0.082 Sum_probs=50.4
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhcc-ccHHHHHHHHHHHHHHHHHhhCh
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGN-SHKKKAKAMGRAASKFIQDELKL 278 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~-~h~~~A~~IA~~g~~f~~~~L~~ 278 (380)
++..+---|+||-.|+..+.. ...+.+.+.--.++. .| .+++.+++..+. ..++..+.++++ ++++.+.++.
T Consensus 275 ~~~~~~Ea~a~G~PvI~~~~~---~~~e~i~~~g~~~~~-~~--~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~ 347 (360)
T cd04951 275 FGLVVAEAMACELPVVATDAG---GVREVVGDSGLIVPI-SD--PEALANKIDEILKMSGEERDIIGAR-RERIVKKFSI 347 (360)
T ss_pred CChHHHHHHHcCCCEEEecCC---ChhhEecCCceEeCC-CC--HHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCH
Confidence 344555667888888776532 222333333333332 23 368889998876 455566666665 8888888888
Q ss_pred hhHHHHHHHHH
Q 016930 279 DYVYDYMFHLL 289 (380)
Q Consensus 279 ~~~~~Y~~~LL 289 (380)
+.+..-+..++
T Consensus 348 ~~~~~~~~~~y 358 (360)
T cd04951 348 NSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHHHh
Confidence 77666555543
No 46
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=28.22 E-value=2e+02 Score=28.61 Aligned_cols=82 Identities=10% Similarity=-0.040 Sum_probs=54.5
Q ss_pred cchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHHHHHHHHHHHHHHHHHhhChhhH
Q 016930 202 VSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKKKAKAMGRAASKFIQDELKLDYV 281 (380)
Q Consensus 202 ~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~~A~~IA~~g~~f~~~~L~~~~~ 281 (380)
..+---|+||-.|+..... -..+.+......+ +..| -.++.+++..+.+++.+.+.+.+++.+++.+.++.+.+
T Consensus 284 ~~~~EAma~G~PVI~s~~g---g~~e~i~~~~~~~-~~~~--~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~ 357 (398)
T cd03796 284 IAIVEAASCGLLVVSTRVG---GIPEVLPPDMILL-AEPD--VESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDV 357 (398)
T ss_pred HHHHHHHHcCCCEEECCCC---CchhheeCCceee-cCCC--HHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHH
Confidence 4566788999999886532 1222222332333 2333 37899999988888887878889999999998887766
Q ss_pred HHHHHHHH
Q 016930 282 YDYMFHLL 289 (380)
Q Consensus 282 ~~Y~~~LL 289 (380)
..-+..+.
T Consensus 358 ~~~~~~~y 365 (398)
T cd03796 358 AKRTEKVY 365 (398)
T ss_pred HHHHHHHH
Confidence 55444443
No 47
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=22.96 E-value=1.7e+02 Score=28.70 Aligned_cols=82 Identities=5% Similarity=-0.142 Sum_probs=51.5
Q ss_pred cccchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhccccHH--HHHHHHHHHHHHHHHhhC
Q 016930 200 WSVSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWGNSHKK--KAKAMGRAASKFIQDELK 277 (380)
Q Consensus 200 ~S~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~~~h~~--~A~~IA~~g~~f~~~~L~ 277 (380)
++..+-=-|+||-.|+..... .-..+.+....+=.=+..++ -+++.++|..+.++++ .-.++.+++++|.++.+.
T Consensus 270 f~~~~lEAma~G~Pvv~s~~~--~g~~eiv~~~~~G~lv~~~d-~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (359)
T PRK09922 270 FPMTLLEAMSYGIPCISSDCM--SGPRDIIKPGLNGELYTPGN-IDEFVGKLNKVISGEVKYQHDAIPNSIERFYEVLYF 346 (359)
T ss_pred cChHHHHHHHcCCCEEEeCCC--CChHHHccCCCceEEECCCC-HHHHHHHHHHHHhCcccCCHHHHHHHHHHhhHHHHH
Confidence 445556678999999887611 11223444444322223222 4799999999988887 467777888888887776
Q ss_pred hhhHHHH
Q 016930 278 LDYVYDY 284 (380)
Q Consensus 278 ~~~~~~Y 284 (380)
..-..+|
T Consensus 347 ~~~~~~~ 353 (359)
T PRK09922 347 KNLNNAL 353 (359)
T ss_pred HHHHHHH
Confidence 5544443
No 48
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=20.74 E-value=1.8e+02 Score=28.68 Aligned_cols=67 Identities=19% Similarity=0.273 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCccccccc-------------cccccCCChhhhhhhhhhccCCCCCCCCCC----CCCCC
Q 016930 285 MFHLLNQYSKLLRYQPTVPPEAVEYCAE-------------RLACAEEGPARKFMEESLVQSPKETSPCTL----PPSYD 347 (380)
Q Consensus 285 ~~~LL~eYakl~~~~P~~~~~~~e~c~~-------------~~~c~~~~~~~~f~~~~~~~~~~~~~~c~~----~~~~~ 347 (380)
...||..+ . +-+-|.+.|+..+.+.+ .-.|.+-..-|.|-..-.. ..+.+.||.- |.||+
T Consensus 87 ~~~lL~~~-~-~~ivP~vNPDGy~ys~~~~r~wrknR~~~~~~~c~GVDLNRNf~~~w~~-~g~s~~Pcs~~Y~G~~pfS 163 (300)
T cd03872 87 MKKMLNQL-Y-FYVMPVFNVDGYHYSWTNDRFWRKTRSKNSRYQCRGVDANRNWKVKWCD-EGASLHPCDDTYCGPFPES 163 (300)
T ss_pred HHHHHhhC-e-EEEEeeecCCcceeeeccchhhhccCCCCCCCCccccccccccCcccCC-CCCCCCCCCCCCCCCCCCC
Confidence 34555543 1 22347777777766422 2357777777777432222 3466789998 78998
Q ss_pred chHHHHH
Q 016930 348 PSSLNDV 354 (380)
Q Consensus 348 ~~~~~~~ 354 (380)
..|-+++
T Consensus 164 EpEt~al 170 (300)
T cd03872 164 EPEVKAV 170 (300)
T ss_pred cHHHHHH
Confidence 8887755
No 49
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=20.50 E-value=5.4e+02 Score=26.37 Aligned_cols=119 Identities=15% Similarity=0.166 Sum_probs=69.5
Q ss_pred CCCCCCCCceeeeeCCCC-chhHHHHHHhhhhCCCCccceeeehhhhhhhhcCCCCCChhhhcccceeeeecCcccc---
Q 016930 126 IKWSDREPYAYWKGNPTV-APTRQDLMKCNVSEGQEWNARVFAQDWIKEQQEGYKQSDLASQCRDRFKIYIEGSAWS--- 201 (380)
Q Consensus 126 ~pW~~K~~~afWRG~~~~-~~~R~~Lv~~~~~~~~~~~a~i~~~~w~~~~~~g~~~~~l~~~~~yKYli~ieG~~~S--- 201 (380)
-.|..|...+.|..+... ...|.++++--..+ +...++..--.+....+...--++-..+|||.|-+|-..--
T Consensus 190 ~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~---l~iD~YG~c~~~~~~~~~~~~~~~~~s~YKFyLAfENS~c~DYV 266 (372)
T KOG2619|consen 190 SILSAKTKLAAWLVSNCIPRSARLDYYKELMKH---LEIDSYGECLRKNANRDPSDCLLETLSHYKFYLAFENSNCEDYV 266 (372)
T ss_pred cccccccceeeeeccccCcchHHHHHHHHHHhh---CceeeccccccccccCCCCCcceeecccceEEEEecccCCcccc
Confidence 457899999999998633 24688887643323 33334432222111111111123444599999999975421
Q ss_pred -cchHHHHhcCCeeeeecCcchhhhhcccCCcceEEEecCCCCcccHHHHHHhc
Q 016930 202 -VSEKYILACDSVTLIVTPKYYDFYTRGLMPLHHYWPINDHDKCRSIKFAVDWG 254 (380)
Q Consensus 202 -~rlk~lL~~~Svvl~~~~~~~e~f~~~L~P~~HYvPv~~d~~~sdl~~~v~w~ 254 (380)
=.|-..|-.+||.+...+.. +....|-.=||-|++ +.+++|.++++
T Consensus 267 TEKfw~al~~gsVPVvlg~~n----~e~fvP~~SfI~vdD---F~s~~ela~yl 313 (372)
T KOG2619|consen 267 TEKFWNALDAGSVPVVLGPPN----YENFVPPDSFIHVDD---FQSPQELAAYL 313 (372)
T ss_pred cHHHHhhhhcCcccEEECCcc----ccccCCCcceEehhh---cCCHHHHHHHH
Confidence 12225677888888877643 445677777887765 45666655444
Done!