Query 016933
Match_columns 380
No_of_seqs 144 out of 1475
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 04:07:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016933.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016933hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 1.7E-67 3.6E-72 461.8 31.3 366 9-378 1-366 (366)
2 COG1064 AdhP Zn-dependent alco 100.0 2.6E-66 5.7E-71 465.0 30.4 335 8-379 1-338 (339)
3 KOG0022 Alcohol dehydrogenase, 100.0 1.6E-65 3.4E-70 441.9 31.1 374 5-378 2-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.2E-59 2.5E-64 408.8 30.0 343 9-380 3-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 1.8E-59 4E-64 406.4 28.7 349 1-379 1-355 (360)
6 PLN02740 Alcohol dehydrogenase 100.0 2.5E-56 5.4E-61 423.6 35.5 377 2-378 2-381 (381)
7 cd08301 alcohol_DH_plants Plan 100.0 1.5E-55 3.3E-60 417.1 35.2 368 9-376 1-368 (369)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.1E-55 4.6E-60 415.3 35.5 367 11-378 2-368 (368)
9 cd08281 liver_ADH_like1 Zinc-d 100.0 4.5E-55 9.7E-60 413.9 36.4 361 11-376 1-370 (371)
10 cd08300 alcohol_DH_class_III c 100.0 5.1E-55 1.1E-59 413.1 35.6 367 10-377 2-368 (368)
11 PLN02827 Alcohol dehydrogenase 100.0 8.1E-55 1.7E-59 412.2 35.1 371 5-379 5-377 (378)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 7.6E-54 1.6E-58 403.7 33.7 356 10-378 1-358 (358)
13 cd08277 liver_alcohol_DH_like 100.0 4.9E-53 1.1E-57 399.1 35.3 365 9-377 1-365 (365)
14 cd08239 THR_DH_like L-threonin 100.0 5.5E-52 1.2E-56 388.6 32.9 337 11-378 1-339 (339)
15 PRK09880 L-idonate 5-dehydroge 100.0 2.9E-51 6.4E-56 383.9 32.2 336 9-378 3-343 (343)
16 COG1063 Tdh Threonine dehydrog 100.0 6.1E-51 1.3E-55 380.0 32.1 343 11-378 1-350 (350)
17 TIGR02819 fdhA_non_GSH formald 100.0 7.6E-51 1.6E-55 385.7 31.2 346 10-379 2-391 (393)
18 COG0604 Qor NADPH:quinone redu 100.0 7.4E-51 1.6E-55 374.4 28.5 315 11-378 1-326 (326)
19 PLN02586 probable cinnamyl alc 100.0 6.7E-50 1.5E-54 376.4 31.2 342 6-378 8-353 (360)
20 PRK10309 galactitol-1-phosphat 100.0 6E-49 1.3E-53 369.2 33.5 339 11-379 1-347 (347)
21 cd08299 alcohol_DH_class_I_II_ 100.0 3E-48 6.4E-53 367.1 36.0 369 7-378 4-373 (373)
22 TIGR03201 dearomat_had 6-hydro 100.0 2.3E-48 4.9E-53 365.2 33.3 333 14-378 2-349 (349)
23 cd08230 glucose_DH Glucose deh 100.0 2.2E-48 4.7E-53 366.3 31.6 334 11-378 1-355 (355)
24 PLN02178 cinnamyl-alcohol dehy 100.0 1.7E-48 3.7E-53 367.9 30.9 333 15-378 11-348 (375)
25 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.2E-48 4.8E-53 361.8 30.7 320 14-376 2-328 (329)
26 KOG1197 Predicted quinone oxid 100.0 4.3E-49 9.2E-54 330.1 23.0 317 6-379 4-331 (336)
27 cd05279 Zn_ADH1 Liver alcohol 100.0 4E-47 8.8E-52 358.8 35.2 364 11-377 1-365 (365)
28 cd08231 MDR_TM0436_like Hypoth 100.0 6.6E-47 1.4E-51 357.2 34.7 348 12-378 2-361 (361)
29 cd08233 butanediol_DH_like (2R 100.0 8.7E-47 1.9E-51 355.1 33.8 335 11-377 1-351 (351)
30 PLN02514 cinnamyl-alcohol dehy 100.0 4.7E-47 1E-51 357.0 31.3 338 11-379 10-351 (357)
31 cd08278 benzyl_alcohol_DH Benz 100.0 3E-46 6.5E-51 352.8 34.0 362 9-377 1-365 (365)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 2.1E-44 4.6E-49 338.8 34.1 342 11-378 1-351 (351)
33 PRK10083 putative oxidoreducta 100.0 1.7E-44 3.7E-49 338.0 33.2 335 11-380 1-339 (339)
34 cd08237 ribitol-5-phosphate_DH 100.0 1.9E-45 4.1E-50 343.9 26.5 322 10-379 2-340 (341)
35 cd08279 Zn_ADH_class_III Class 100.0 5.5E-44 1.2E-48 337.4 35.1 360 11-376 1-362 (363)
36 cd08296 CAD_like Cinnamyl alco 100.0 3.9E-44 8.5E-49 334.6 32.1 330 11-377 1-333 (333)
37 cd08238 sorbose_phosphate_red 100.0 5.9E-44 1.3E-48 341.8 31.6 331 9-378 1-368 (410)
38 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.2E-43 4.8E-48 331.8 33.2 336 11-376 1-350 (350)
39 cd08283 FDH_like_1 Glutathione 100.0 2.6E-43 5.5E-48 335.1 32.8 357 11-378 1-386 (386)
40 cd05278 FDH_like Formaldehyde 100.0 4.4E-43 9.5E-48 329.5 33.1 341 11-378 1-347 (347)
41 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.2E-43 2.7E-48 327.1 27.6 303 10-377 1-308 (308)
42 cd05284 arabinose_DH_like D-ar 100.0 1.3E-42 2.8E-47 325.4 32.9 332 11-378 1-340 (340)
43 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2E-42 4.3E-47 327.3 32.7 359 11-377 1-367 (367)
44 cd08246 crotonyl_coA_red croto 100.0 1.9E-42 4E-47 330.4 32.7 342 6-377 8-392 (393)
45 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.5E-42 5.4E-47 324.8 32.2 336 11-377 1-349 (350)
46 cd08286 FDH_like_ADH2 formalde 100.0 2.5E-42 5.4E-47 324.1 32.1 337 11-378 1-345 (345)
47 PRK05396 tdh L-threonine 3-deh 100.0 3.9E-42 8.4E-47 322.3 33.3 337 11-379 1-341 (341)
48 cd08260 Zn_ADH6 Alcohol dehydr 100.0 3.9E-42 8.5E-47 322.8 33.2 338 11-377 1-344 (345)
49 TIGR01751 crot-CoA-red crotony 100.0 6.1E-42 1.3E-46 327.0 32.5 344 6-379 3-388 (398)
50 PLN02702 L-idonate 5-dehydroge 100.0 1.4E-41 3E-46 321.2 33.9 338 10-377 17-363 (364)
51 cd08291 ETR_like_1 2-enoyl thi 100.0 4.5E-42 9.8E-47 319.5 28.5 309 11-377 1-324 (324)
52 cd08282 PFDH_like Pseudomonas 100.0 3.8E-41 8.3E-46 319.2 32.4 343 11-378 1-375 (375)
53 cd08284 FDH_like_2 Glutathione 100.0 5.6E-41 1.2E-45 314.9 32.9 338 11-377 1-343 (344)
54 PRK13771 putative alcohol dehy 100.0 2.4E-41 5.2E-46 316.0 29.5 330 11-378 1-333 (334)
55 cd05283 CAD1 Cinnamyl alcohol 100.0 4.1E-41 8.9E-46 314.8 30.7 334 12-377 1-337 (337)
56 cd08262 Zn_ADH8 Alcohol dehydr 100.0 7.5E-41 1.6E-45 313.6 32.2 325 11-377 1-341 (341)
57 PLN03154 putative allyl alcoho 100.0 3E-41 6.4E-46 316.2 29.0 314 7-379 5-346 (348)
58 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.4E-40 3.1E-45 311.2 33.5 333 11-378 1-337 (337)
59 cd08287 FDH_like_ADH3 formalde 100.0 1.2E-40 2.5E-45 312.8 32.5 335 11-378 1-345 (345)
60 cd08242 MDR_like Medium chain 100.0 1E-40 2.2E-45 309.9 31.4 319 11-378 1-319 (319)
61 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.7E-40 3.7E-45 315.6 33.1 328 22-376 38-383 (384)
62 cd08235 iditol_2_DH_like L-idi 100.0 2.4E-40 5.2E-45 310.4 32.9 336 11-377 1-343 (343)
63 cd05285 sorbitol_DH Sorbitol d 100.0 2.3E-40 5.1E-45 310.4 32.4 334 13-376 1-341 (343)
64 cd05281 TDH Threonine dehydrog 100.0 4.6E-40 9.9E-45 308.2 33.3 337 11-378 1-341 (341)
65 PRK09422 ethanol-active dehydr 100.0 3.3E-40 7.1E-45 308.9 32.1 333 11-379 1-337 (338)
66 KOG0025 Zn2+-binding dehydroge 100.0 1.1E-40 2.4E-45 284.5 26.0 318 7-379 16-353 (354)
67 TIGR03366 HpnZ_proposed putati 100.0 4.8E-41 1E-45 305.9 23.8 269 67-359 1-280 (280)
68 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.2E-39 2.6E-44 305.0 32.6 334 11-378 1-338 (338)
69 cd08236 sugar_DH NAD(P)-depend 100.0 1.7E-39 3.6E-44 304.8 32.7 336 11-376 1-343 (343)
70 cd08295 double_bond_reductase_ 100.0 5.2E-40 1.1E-44 307.4 29.0 310 11-378 8-338 (338)
71 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.3E-39 2.9E-44 303.8 31.4 329 11-377 1-332 (332)
72 cd08292 ETR_like_2 2-enoyl thi 100.0 9.4E-40 2E-44 303.9 29.5 309 11-377 1-324 (324)
73 cd08232 idonate-5-DH L-idonate 100.0 3.7E-39 8E-44 301.9 32.4 332 16-378 3-339 (339)
74 cd08297 CAD3 Cinnamyl alcohol 100.0 6.7E-39 1.5E-43 300.4 33.7 334 11-378 1-341 (341)
75 TIGR00692 tdh L-threonine 3-de 100.0 9.4E-39 2E-43 299.2 33.3 332 17-378 5-340 (340)
76 cd08234 threonine_DH_like L-th 100.0 1.1E-38 2.5E-43 298.0 32.8 331 11-376 1-333 (334)
77 cd08293 PTGR2 Prostaglandin re 100.0 5.6E-39 1.2E-43 301.4 30.7 299 23-378 23-345 (345)
78 cd08294 leukotriene_B4_DH_like 100.0 2.4E-39 5.1E-44 301.9 27.4 304 10-378 2-329 (329)
79 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.1E-38 2.3E-43 298.6 31.3 335 11-378 1-342 (342)
80 cd08298 CAD2 Cinnamyl alcohol 100.0 8.2E-39 1.8E-43 298.3 30.3 323 11-376 1-329 (329)
81 TIGR02825 B4_12hDH leukotriene 100.0 5.6E-39 1.2E-43 298.9 28.7 291 23-377 19-325 (325)
82 cd08264 Zn_ADH_like2 Alcohol d 100.0 8.9E-39 1.9E-43 297.6 29.1 320 11-374 1-324 (325)
83 cd08245 CAD Cinnamyl alcohol d 100.0 3E-38 6.5E-43 294.6 30.3 327 12-376 1-330 (330)
84 cd08274 MDR9 Medium chain dehy 100.0 8.6E-38 1.9E-42 293.9 29.4 323 11-378 1-350 (350)
85 PRK10754 quinone oxidoreductas 100.0 8.6E-38 1.9E-42 291.2 27.1 314 10-377 1-326 (327)
86 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.4E-37 5.3E-42 289.2 29.1 308 12-377 1-334 (336)
87 cd08290 ETR 2-enoyl thioester 100.0 1.8E-37 3.8E-42 290.8 27.8 314 11-378 1-341 (341)
88 cd08258 Zn_ADH4 Alcohol dehydr 100.0 4.9E-37 1.1E-41 283.2 29.7 300 11-342 1-306 (306)
89 cd08276 MDR7 Medium chain dehy 100.0 5.6E-36 1.2E-40 279.8 31.9 330 11-378 1-336 (336)
90 cd08244 MDR_enoyl_red Possible 100.0 3.4E-36 7.3E-41 280.0 30.3 312 11-378 1-324 (324)
91 COG2130 Putative NADP-dependen 100.0 1.4E-36 3E-41 262.2 24.7 293 23-380 27-340 (340)
92 cd08250 Mgc45594_like Mgc45594 100.0 1.9E-36 4E-41 282.4 27.8 311 10-377 1-329 (329)
93 PTZ00354 alcohol dehydrogenase 100.0 4.3E-36 9.4E-41 280.4 29.7 315 10-379 1-329 (334)
94 KOG1198 Zinc-binding oxidoredu 100.0 7.5E-37 1.6E-41 281.5 24.0 302 23-380 20-347 (347)
95 cd08249 enoyl_reductase_like e 100.0 3.5E-36 7.7E-41 281.6 28.6 315 11-378 1-339 (339)
96 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.2E-35 2.6E-40 276.3 30.5 312 11-378 1-325 (325)
97 cd08270 MDR4 Medium chain dehy 100.0 2.2E-35 4.8E-40 272.2 27.2 297 11-378 1-305 (305)
98 cd05282 ETR_like 2-enoyl thioe 100.0 4.9E-35 1.1E-39 272.1 29.1 298 23-377 14-323 (323)
99 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.3E-34 2.9E-39 267.8 31.7 301 18-376 3-311 (312)
100 cd08243 quinone_oxidoreductase 100.0 4.1E-35 8.9E-40 272.0 27.6 311 11-376 1-319 (320)
101 cd08252 AL_MDR Arginate lyase 100.0 1.6E-34 3.4E-39 270.3 30.6 312 11-377 1-336 (336)
102 cd08289 MDR_yhfp_like Yhfp put 100.0 1.3E-34 2.8E-39 269.7 29.0 314 11-378 1-326 (326)
103 TIGR02823 oxido_YhdH putative 100.0 3E-34 6.5E-39 266.9 29.8 310 12-378 1-323 (323)
104 cd08248 RTN4I1 Human Reticulon 100.0 1.2E-34 2.7E-39 272.5 24.6 311 11-377 1-350 (350)
105 cd08288 MDR_yhdh Yhdh putative 100.0 1.5E-33 3.3E-38 262.2 28.9 312 11-378 1-324 (324)
106 cd08247 AST1_like AST1 is a cy 100.0 1.4E-33 3.1E-38 265.5 28.3 317 12-378 2-352 (352)
107 cd05288 PGDH Prostaglandin deh 100.0 8.3E-34 1.8E-38 264.6 26.4 305 11-376 2-329 (329)
108 cd08253 zeta_crystallin Zeta-c 100.0 4.3E-33 9.4E-38 258.6 29.7 315 11-378 1-325 (325)
109 cd05276 p53_inducible_oxidored 100.0 4.9E-33 1.1E-37 257.8 29.1 309 11-376 1-323 (323)
110 cd05286 QOR2 Quinone oxidoredu 100.0 6.8E-33 1.5E-37 256.6 29.9 309 12-378 1-320 (320)
111 cd05188 MDR Medium chain reduc 100.0 5.1E-33 1.1E-37 251.6 26.0 268 37-338 1-270 (271)
112 cd08273 MDR8 Medium chain dehy 100.0 8.6E-33 1.9E-37 257.9 27.3 305 12-376 2-330 (331)
113 cd08271 MDR5 Medium chain dehy 100.0 1.2E-32 2.7E-37 255.9 27.7 312 11-378 1-325 (325)
114 cd08272 MDR6 Medium chain dehy 100.0 2.6E-32 5.6E-37 253.7 28.6 311 11-378 1-326 (326)
115 cd08268 MDR2 Medium chain dehy 100.0 8.5E-32 1.8E-36 250.3 29.1 316 11-378 1-328 (328)
116 cd08251 polyketide_synthase po 100.0 9.5E-32 2.1E-36 247.3 29.1 292 30-376 2-303 (303)
117 TIGR02824 quinone_pig3 putativ 100.0 2E-31 4.3E-36 247.6 30.2 311 11-378 1-325 (325)
118 cd08275 MDR3 Medium chain dehy 100.0 9.4E-31 2E-35 244.5 30.6 309 13-378 2-337 (337)
119 cd05289 MDR_like_2 alcohol deh 100.0 2E-31 4.3E-36 245.7 25.4 302 11-376 1-309 (309)
120 cd08241 QOR1 Quinone oxidoredu 100.0 8.1E-31 1.8E-35 243.1 28.7 309 11-377 1-323 (323)
121 cd08267 MDR1 Medium chain dehy 100.0 1.8E-30 4E-35 240.7 25.9 295 24-376 15-319 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 3.5E-30 7.6E-35 235.1 25.7 282 36-376 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 1.4E-29 3E-34 230.8 26.0 277 40-376 2-288 (288)
124 KOG1196 Predicted NAD-dependen 100.0 5.8E-28 1.3E-32 208.2 24.0 295 25-379 26-341 (343)
125 cd08255 2-desacetyl-2-hydroxye 100.0 1.1E-27 2.5E-32 217.8 23.9 247 62-376 18-277 (277)
126 KOG1202 Animal-type fatty acid 99.9 2.5E-27 5.4E-32 232.8 15.9 293 23-379 1429-1742(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 2.2E-23 4.7E-28 161.8 8.4 108 35-164 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 3.4E-17 7.3E-22 131.4 12.4 128 206-341 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.8E-12 3.9E-17 121.8 15.3 176 184-379 189-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 9.5E-12 2.1E-16 119.9 15.3 155 192-351 161-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.2 1.8E-12 3.8E-17 103.4 1.4 119 239-376 1-127 (127)
132 TIGR00561 pntA NAD(P) transhyd 98.6 1.6E-06 3.6E-11 83.7 16.2 107 194-302 162-289 (511)
133 PRK11873 arsM arsenite S-adeno 98.5 3.9E-07 8.4E-12 82.6 7.9 167 190-370 72-252 (272)
134 PF11017 DUF2855: Protein of u 98.5 1.9E-06 4.1E-11 77.7 11.7 204 149-370 90-311 (314)
135 PRK05476 S-adenosyl-L-homocyst 98.4 6.8E-06 1.5E-10 78.0 13.6 103 183-300 198-302 (425)
136 PRK08306 dipicolinate synthase 98.3 2.3E-05 5E-10 71.6 14.4 99 195-305 151-249 (296)
137 TIGR00936 ahcY adenosylhomocys 98.2 2.5E-05 5.5E-10 73.7 12.3 102 184-300 182-285 (406)
138 TIGR01035 hemA glutamyl-tRNA r 98.1 1.6E-07 3.4E-12 90.0 -3.5 159 68-278 90-253 (417)
139 PLN02494 adenosylhomocysteinas 98.1 4.4E-05 9.5E-10 72.8 11.8 101 184-299 241-343 (477)
140 PRK00517 prmA ribosomal protei 98.1 7.6E-05 1.6E-09 66.6 12.6 131 149-299 78-215 (250)
141 cd05213 NAD_bind_Glutamyl_tRNA 98.1 1.1E-05 2.3E-10 74.5 7.2 107 160-278 140-251 (311)
142 COG2518 Pcm Protein-L-isoaspar 97.9 0.00013 2.8E-09 61.9 9.5 105 179-296 58-168 (209)
143 PTZ00075 Adenosylhomocysteinas 97.8 0.0002 4.3E-09 68.6 11.9 101 185-300 242-344 (476)
144 TIGR00518 alaDH alanine dehydr 97.8 0.00016 3.5E-09 68.2 11.3 99 195-301 166-271 (370)
145 PRK12771 putative glutamate sy 97.8 2E-05 4.3E-10 79.0 4.7 81 192-278 133-235 (564)
146 TIGR02853 spore_dpaA dipicolin 97.7 0.00075 1.6E-08 61.3 13.5 99 195-305 150-248 (287)
147 PRK00045 hemA glutamyl-tRNA re 97.6 0.00011 2.4E-09 70.8 5.5 90 179-278 162-255 (423)
148 PRK08324 short chain dehydroge 97.6 0.00075 1.6E-08 69.3 11.9 137 149-299 386-559 (681)
149 PF01488 Shikimate_DH: Shikima 97.5 0.00045 9.8E-09 55.4 7.6 73 195-276 11-86 (135)
150 TIGR00406 prmA ribosomal prote 97.4 0.00045 9.8E-09 63.0 7.7 97 193-299 157-261 (288)
151 COG4221 Short-chain alcohol de 97.3 0.0018 3.8E-08 56.2 9.0 79 195-275 5-91 (246)
152 PRK13943 protein-L-isoaspartat 97.3 0.0025 5.4E-08 58.8 10.4 102 188-296 73-179 (322)
153 PRK11705 cyclopropane fatty ac 97.2 0.0027 5.8E-08 60.2 10.5 110 179-298 151-268 (383)
154 PRK00377 cbiT cobalt-precorrin 97.2 0.0048 1E-07 52.9 11.1 102 189-296 34-144 (198)
155 PRK05693 short chain dehydroge 97.2 0.0072 1.6E-07 54.6 12.5 77 197-275 2-82 (274)
156 PRK05993 short chain dehydroge 97.1 0.0033 7.1E-08 57.0 9.9 79 195-275 3-86 (277)
157 PRK06182 short chain dehydroge 97.1 0.0078 1.7E-07 54.4 12.3 79 195-275 2-84 (273)
158 PRK05786 fabG 3-ketoacyl-(acyl 97.1 0.011 2.3E-07 52.1 12.9 104 195-300 4-138 (238)
159 PF01262 AlaDh_PNT_C: Alanine 97.0 0.0027 5.9E-08 52.9 7.4 101 196-299 20-141 (168)
160 PF13460 NAD_binding_10: NADH( 97.0 0.0096 2.1E-07 50.1 10.6 93 199-299 1-99 (183)
161 KOG1209 1-Acyl dihydroxyaceton 96.9 0.0099 2.2E-07 50.3 9.9 81 194-275 5-91 (289)
162 COG3967 DltE Short-chain dehyd 96.9 0.0059 1.3E-07 51.4 8.5 79 195-275 4-88 (245)
163 PF02826 2-Hacid_dh_C: D-isome 96.9 0.0078 1.7E-07 50.7 9.5 90 194-298 34-128 (178)
164 PF01135 PCMT: Protein-L-isoas 96.9 0.0024 5.2E-08 55.1 6.4 104 187-298 64-174 (209)
165 COG2242 CobL Precorrin-6B meth 96.8 0.014 3.1E-07 48.6 10.0 104 189-299 28-137 (187)
166 PRK12742 oxidoreductase; Provi 96.8 0.032 6.9E-07 49.0 12.8 101 195-300 5-134 (237)
167 COG0686 Ald Alanine dehydrogen 96.8 0.0098 2.1E-07 53.3 9.0 98 196-300 168-271 (371)
168 TIGR00438 rrmJ cell division p 96.7 0.024 5.1E-07 48.2 11.1 100 190-297 27-146 (188)
169 PRK07326 short chain dehydroge 96.7 0.036 7.7E-07 48.7 12.4 79 195-275 5-92 (237)
170 PRK13942 protein-L-isoaspartat 96.7 0.021 4.5E-07 49.6 10.6 101 187-296 68-175 (212)
171 PRK04148 hypothetical protein; 96.6 0.059 1.3E-06 42.7 11.8 90 194-294 15-105 (134)
172 PF02353 CMAS: Mycolic acid cy 96.6 0.0058 1.3E-07 55.1 7.0 102 186-299 53-168 (273)
173 PRK07060 short chain dehydroge 96.6 0.019 4.2E-07 50.7 10.3 77 195-275 8-87 (245)
174 PRK08017 oxidoreductase; Provi 96.6 0.015 3.3E-07 51.8 9.7 78 197-275 3-84 (256)
175 PLN03209 translocon at the inn 96.6 0.059 1.3E-06 53.3 14.1 105 189-300 73-210 (576)
176 COG2264 PrmA Ribosomal protein 96.6 0.027 5.9E-07 50.9 10.8 100 193-300 160-266 (300)
177 COG0300 DltE Short-chain dehyd 96.6 0.018 3.9E-07 51.3 9.6 79 194-275 4-94 (265)
178 TIGR02469 CbiT precorrin-6Y C5 96.6 0.029 6.2E-07 43.7 10.0 101 189-297 13-122 (124)
179 TIGR01470 cysG_Nterm siroheme 96.6 0.1 2.2E-06 45.0 13.9 116 195-321 8-124 (205)
180 PF00670 AdoHcyase_NAD: S-aden 96.6 0.038 8.2E-07 45.2 10.4 92 193-299 20-112 (162)
181 PRK08177 short chain dehydroge 96.5 0.018 4E-07 50.2 9.5 77 197-275 2-81 (225)
182 PRK06718 precorrin-2 dehydroge 96.5 0.092 2E-06 45.1 13.4 114 195-321 9-124 (202)
183 PF12847 Methyltransf_18: Meth 96.5 0.0094 2E-07 45.7 6.5 94 195-296 1-110 (112)
184 PRK13944 protein-L-isoaspartat 96.5 0.025 5.5E-07 48.8 9.7 100 188-296 65-172 (205)
185 PRK13940 glutamyl-tRNA reducta 96.5 0.014 3E-07 55.9 8.7 76 194-278 179-255 (414)
186 COG1748 LYS9 Saccharopine dehy 96.5 0.037 8.1E-07 52.0 11.3 95 197-298 2-100 (389)
187 PRK06139 short chain dehydroge 96.5 0.018 3.9E-07 53.7 9.3 79 195-275 6-94 (330)
188 KOG1205 Predicted dehydrogenas 96.4 0.025 5.3E-07 50.8 9.5 106 195-302 11-154 (282)
189 PRK03369 murD UDP-N-acetylmura 96.4 0.025 5.4E-07 55.7 10.5 73 193-276 9-81 (488)
190 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.038 8.3E-07 45.9 10.0 97 174-300 22-119 (168)
191 COG3288 PntA NAD/NADP transhyd 96.4 0.032 6.9E-07 49.9 9.7 131 190-322 158-308 (356)
192 COG4122 Predicted O-methyltran 96.3 0.053 1.1E-06 46.9 10.7 106 190-299 54-168 (219)
193 PRK06949 short chain dehydroge 96.3 0.032 6.9E-07 49.7 9.9 80 194-275 7-96 (258)
194 PRK12939 short chain dehydroge 96.3 0.1 2.2E-06 46.1 13.0 79 195-275 6-94 (250)
195 PRK07109 short chain dehydroge 96.3 0.068 1.5E-06 49.9 12.2 79 195-275 7-95 (334)
196 PRK06719 precorrin-2 dehydroge 96.3 0.099 2.2E-06 42.9 11.8 113 195-321 12-124 (157)
197 PRK06057 short chain dehydroge 96.3 0.033 7.2E-07 49.6 9.8 79 195-275 6-89 (255)
198 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.064 1.4E-06 52.3 12.5 79 195-275 209-294 (450)
199 PRK12828 short chain dehydroge 96.3 0.031 6.7E-07 49.0 9.3 79 195-275 6-92 (239)
200 TIGR01318 gltD_gamma_fam gluta 96.2 0.025 5.3E-07 55.4 9.2 79 194-277 139-238 (467)
201 PRK14967 putative methyltransf 96.2 0.28 6E-06 42.9 15.0 97 190-296 31-158 (223)
202 PRK08265 short chain dehydroge 96.2 0.091 2E-06 47.0 12.2 79 195-275 5-90 (261)
203 PRK07806 short chain dehydroge 96.2 0.086 1.9E-06 46.6 11.9 101 195-298 5-135 (248)
204 PRK08267 short chain dehydroge 96.2 0.13 2.7E-06 46.0 13.0 77 197-275 2-87 (260)
205 PF13241 NAD_binding_7: Putati 96.2 0.049 1.1E-06 41.2 8.7 95 195-306 6-100 (103)
206 COG0169 AroE Shikimate 5-dehyd 96.2 0.016 3.5E-07 52.2 6.9 45 194-238 124-168 (283)
207 PRK07831 short chain dehydroge 96.1 0.045 9.6E-07 49.0 9.8 81 193-275 14-107 (262)
208 COG2230 Cfa Cyclopropane fatty 96.1 0.12 2.6E-06 46.3 12.2 106 182-302 59-181 (283)
209 PRK12549 shikimate 5-dehydroge 96.1 0.05 1.1E-06 49.5 10.1 43 195-237 126-168 (284)
210 PRK06953 short chain dehydroge 96.1 0.046 9.9E-07 47.6 9.6 77 197-275 2-80 (222)
211 PRK00107 gidB 16S rRNA methylt 96.1 0.051 1.1E-06 46.1 9.4 97 193-297 43-145 (187)
212 cd01075 NAD_bind_Leu_Phe_Val_D 96.1 0.092 2E-06 45.1 11.2 82 194-288 26-108 (200)
213 PLN02780 ketoreductase/ oxidor 96.1 0.048 1E-06 50.6 10.1 80 195-275 52-142 (320)
214 PRK07814 short chain dehydroge 96.1 0.041 9E-07 49.3 9.3 79 195-275 9-97 (263)
215 PRK12809 putative oxidoreducta 96.1 0.032 6.9E-07 56.9 9.4 76 195-276 309-406 (639)
216 TIGR00080 pimt protein-L-isoas 96.1 0.066 1.4E-06 46.5 10.2 102 188-296 70-176 (215)
217 TIGR02356 adenyl_thiF thiazole 96.1 0.069 1.5E-06 45.9 10.1 34 196-229 21-54 (202)
218 TIGR03325 BphB_TodD cis-2,3-di 96.0 0.045 9.8E-07 49.0 9.3 78 195-274 4-88 (262)
219 TIGR01809 Shik-DH-AROM shikima 96.0 0.031 6.6E-07 50.8 8.2 75 195-275 124-200 (282)
220 PRK08261 fabG 3-ketoacyl-(acyl 96.0 0.019 4.1E-07 56.0 7.3 94 188-299 26-125 (450)
221 PRK05872 short chain dehydroge 96.0 0.034 7.3E-07 50.9 8.5 79 195-275 8-95 (296)
222 PRK12829 short chain dehydroge 96.0 0.037 8E-07 49.4 8.7 80 194-275 9-96 (264)
223 COG2910 Putative NADH-flavin r 96.0 0.023 4.9E-07 47.1 6.4 92 198-299 2-106 (211)
224 PRK14175 bifunctional 5,10-met 96.0 0.071 1.5E-06 48.1 10.2 95 175-300 137-233 (286)
225 PRK06200 2,3-dihydroxy-2,3-dih 96.0 0.059 1.3E-06 48.2 9.9 79 195-275 5-90 (263)
226 PRK00536 speE spermidine synth 96.0 0.029 6.2E-07 50.0 7.5 101 194-298 71-172 (262)
227 PRK12550 shikimate 5-dehydroge 95.9 0.057 1.2E-06 48.7 9.4 70 192-275 118-188 (272)
228 COG2519 GCD14 tRNA(1-methylade 95.9 0.094 2E-06 45.9 10.0 105 188-299 87-197 (256)
229 COG0373 HemA Glutamyl-tRNA red 95.9 0.067 1.4E-06 50.7 9.8 97 194-300 176-277 (414)
230 PRK06180 short chain dehydroge 95.8 0.06 1.3E-06 48.7 9.3 79 195-275 3-88 (277)
231 PRK07825 short chain dehydroge 95.8 0.079 1.7E-06 47.7 10.1 78 196-275 5-88 (273)
232 PRK06841 short chain dehydroge 95.8 0.053 1.1E-06 48.2 8.8 79 195-275 14-99 (255)
233 PRK05866 short chain dehydroge 95.8 0.077 1.7E-06 48.5 10.0 79 195-275 39-127 (293)
234 PLN02781 Probable caffeoyl-CoA 95.8 0.084 1.8E-06 46.5 9.8 106 189-298 62-179 (234)
235 PRK08217 fabG 3-ketoacyl-(acyl 95.8 0.1 2.2E-06 46.2 10.6 80 195-275 4-92 (253)
236 PRK07832 short chain dehydroge 95.8 0.16 3.5E-06 45.7 11.9 76 198-275 2-88 (272)
237 cd05311 NAD_bind_2_malic_enz N 95.8 0.18 4E-06 44.1 11.7 90 194-296 23-127 (226)
238 PRK09291 short chain dehydroge 95.7 0.078 1.7E-06 47.2 9.5 74 196-275 2-83 (257)
239 PRK12429 3-hydroxybutyrate deh 95.7 0.16 3.5E-06 45.1 11.6 79 195-275 3-91 (258)
240 PRK07231 fabG 3-ketoacyl-(acyl 95.7 0.068 1.5E-06 47.3 9.1 79 195-275 4-91 (251)
241 PRK08628 short chain dehydroge 95.7 0.067 1.5E-06 47.7 9.0 79 195-275 6-93 (258)
242 KOG1014 17 beta-hydroxysteroid 95.7 0.089 1.9E-06 47.4 9.5 79 194-275 47-136 (312)
243 PRK07774 short chain dehydroge 95.7 0.081 1.8E-06 46.8 9.5 79 195-275 5-93 (250)
244 PRK06505 enoyl-(acyl carrier p 95.7 0.088 1.9E-06 47.5 9.7 79 195-275 6-95 (271)
245 PRK08339 short chain dehydroge 95.7 0.094 2E-06 47.1 9.9 79 195-275 7-95 (263)
246 PRK05867 short chain dehydroge 95.7 0.076 1.6E-06 47.2 9.2 79 195-275 8-96 (253)
247 KOG1252 Cystathionine beta-syn 95.7 0.44 9.6E-06 43.4 13.6 56 189-245 96-155 (362)
248 PLN02366 spermidine synthase 95.7 0.09 2E-06 48.3 9.6 99 194-297 90-206 (308)
249 PRK08618 ornithine cyclodeamin 95.7 0.17 3.6E-06 47.0 11.6 94 194-300 125-224 (325)
250 PRK09072 short chain dehydroge 95.7 0.098 2.1E-06 46.8 9.9 79 195-275 4-90 (263)
251 PRK08263 short chain dehydroge 95.7 0.21 4.5E-06 45.1 12.1 79 196-275 3-87 (275)
252 COG0031 CysK Cysteine synthase 95.6 0.51 1.1E-05 42.8 14.1 61 188-248 54-116 (300)
253 PRK07502 cyclohexadienyl dehyd 95.6 0.09 1.9E-06 48.4 9.8 92 197-299 7-102 (307)
254 PRK12769 putative oxidoreducta 95.6 0.053 1.1E-06 55.5 8.9 76 194-275 325-422 (654)
255 PRK15116 sulfur acceptor prote 95.6 0.24 5.2E-06 44.4 11.9 103 195-299 29-155 (268)
256 PRK08862 short chain dehydroge 95.6 0.086 1.9E-06 46.2 9.1 79 195-274 4-92 (227)
257 TIGR01832 kduD 2-deoxy-D-gluco 95.6 0.1 2.2E-06 46.2 9.7 79 195-275 4-90 (248)
258 PRK07677 short chain dehydroge 95.6 0.093 2E-06 46.6 9.4 79 196-275 1-88 (252)
259 PRK08703 short chain dehydroge 95.5 0.063 1.4E-06 47.3 8.1 80 195-275 5-97 (239)
260 PRK07574 formate dehydrogenase 95.5 0.12 2.5E-06 49.0 10.2 46 195-241 191-236 (385)
261 COG1179 Dinucleotide-utilizing 95.5 0.19 4.2E-06 43.6 10.5 103 196-299 30-155 (263)
262 PRK00811 spermidine synthase; 95.5 0.1 2.2E-06 47.5 9.5 98 194-296 75-190 (283)
263 PRK05653 fabG 3-ketoacyl-(acyl 95.5 0.099 2.1E-06 45.9 9.4 78 196-275 5-92 (246)
264 PRK06196 oxidoreductase; Provi 95.5 0.12 2.5E-06 47.9 10.1 79 195-275 25-109 (315)
265 PRK06128 oxidoreductase; Provi 95.5 0.21 4.5E-06 45.8 11.6 79 195-275 54-144 (300)
266 PRK06500 short chain dehydroge 95.5 0.11 2.4E-06 45.8 9.5 79 195-275 5-90 (249)
267 PRK07533 enoyl-(acyl carrier p 95.5 0.13 2.8E-06 46.0 9.9 79 195-275 9-98 (258)
268 PRK07454 short chain dehydroge 95.4 0.15 3.2E-06 45.0 10.1 80 194-275 4-93 (241)
269 PRK06484 short chain dehydroge 95.4 0.28 6.1E-06 48.7 13.2 103 194-299 267-402 (520)
270 PLN02476 O-methyltransferase 95.4 0.16 3.4E-06 45.8 10.2 106 189-298 112-229 (278)
271 PRK06483 dihydromonapterin red 95.4 0.14 3E-06 44.9 9.9 78 196-275 2-84 (236)
272 PRK05884 short chain dehydroge 95.4 0.14 3.1E-06 44.7 9.8 74 198-274 2-78 (223)
273 PRK06463 fabG 3-ketoacyl-(acyl 95.4 0.12 2.7E-06 45.9 9.6 79 195-275 6-89 (255)
274 PRK06482 short chain dehydroge 95.4 0.12 2.6E-06 46.7 9.5 77 197-275 3-86 (276)
275 PRK06198 short chain dehydroge 95.4 0.11 2.3E-06 46.4 9.1 80 195-275 5-94 (260)
276 PRK07062 short chain dehydroge 95.4 0.11 2.3E-06 46.6 9.1 79 195-275 7-97 (265)
277 PF03446 NAD_binding_2: NAD bi 95.4 0.32 6.9E-06 40.2 11.2 90 197-300 2-97 (163)
278 PRK07402 precorrin-6B methylas 95.4 0.32 7E-06 41.5 11.6 105 188-298 33-143 (196)
279 cd01078 NAD_bind_H4MPT_DH NADP 95.4 0.21 4.6E-06 42.6 10.5 76 195-277 27-109 (194)
280 PRK07478 short chain dehydroge 95.3 0.12 2.7E-06 45.8 9.4 79 195-275 5-93 (254)
281 CHL00194 ycf39 Ycf39; Provisio 95.3 0.12 2.6E-06 47.8 9.5 95 198-299 2-111 (317)
282 PRK13394 3-hydroxybutyrate deh 95.3 0.13 2.8E-06 45.9 9.4 79 195-275 6-94 (262)
283 PRK07024 short chain dehydroge 95.3 0.14 3.1E-06 45.6 9.7 78 196-275 2-88 (257)
284 PRK07523 gluconate 5-dehydroge 95.3 0.14 3E-06 45.6 9.4 79 195-275 9-97 (255)
285 PRK07890 short chain dehydroge 95.3 0.13 2.9E-06 45.7 9.4 79 195-275 4-92 (258)
286 PRK05717 oxidoreductase; Valid 95.3 0.17 3.7E-06 45.0 10.0 79 195-275 9-94 (255)
287 PF03435 Saccharop_dh: Sacchar 95.2 0.19 4.2E-06 47.9 10.9 90 199-295 1-96 (386)
288 PRK06172 short chain dehydroge 95.2 0.14 2.9E-06 45.5 9.3 79 195-275 6-94 (253)
289 PRK07904 short chain dehydroge 95.2 0.19 4.1E-06 44.8 10.2 81 193-275 5-97 (253)
290 TIGR03840 TMPT_Se_Te thiopurin 95.2 0.26 5.5E-06 42.8 10.6 102 194-299 33-154 (213)
291 PRK08213 gluconate 5-dehydroge 95.2 0.15 3.2E-06 45.5 9.5 79 195-275 11-99 (259)
292 PRK06138 short chain dehydroge 95.2 0.13 2.7E-06 45.6 9.0 79 195-275 4-91 (252)
293 PRK04457 spermidine synthase; 95.2 0.27 5.8E-06 44.2 11.0 98 194-296 65-176 (262)
294 PRK05562 precorrin-2 dehydroge 95.2 0.93 2E-05 39.4 13.8 117 195-322 24-141 (223)
295 PRK12475 thiamine/molybdopteri 95.2 0.17 3.7E-06 47.2 10.0 35 196-230 24-58 (338)
296 PRK06194 hypothetical protein; 95.2 0.14 2.9E-06 46.5 9.3 79 196-275 6-93 (287)
297 PRK06125 short chain dehydroge 95.2 0.23 5E-06 44.2 10.7 77 195-275 6-91 (259)
298 PRK06181 short chain dehydroge 95.2 0.14 3.1E-06 45.7 9.4 78 196-275 1-88 (263)
299 PLN03139 formate dehydrogenase 95.2 0.18 3.8E-06 47.8 10.1 89 195-297 198-291 (386)
300 KOG0725 Reductases with broad 95.2 0.13 2.9E-06 46.3 9.0 81 194-275 6-99 (270)
301 PLN03075 nicotianamine synthas 95.2 0.17 3.7E-06 45.9 9.6 98 195-297 123-233 (296)
302 PRK06179 short chain dehydroge 95.2 0.058 1.3E-06 48.5 6.8 77 195-275 3-83 (270)
303 cd01065 NAD_bind_Shikimate_DH 95.2 0.21 4.6E-06 40.6 9.5 74 194-276 17-92 (155)
304 PRK08219 short chain dehydroge 95.1 0.5 1.1E-05 40.9 12.5 74 197-275 4-81 (227)
305 PRK11207 tellurite resistance 95.1 0.067 1.4E-06 45.8 6.6 97 191-297 26-134 (197)
306 TIGR00507 aroE shikimate 5-deh 95.1 0.19 4.1E-06 45.3 9.9 71 193-275 114-188 (270)
307 PRK05876 short chain dehydroge 95.1 0.16 3.5E-06 45.9 9.5 79 195-275 5-93 (275)
308 PRK06914 short chain dehydroge 95.1 0.19 4.1E-06 45.4 10.0 77 196-275 3-91 (280)
309 cd00755 YgdL_like Family of ac 95.1 0.26 5.6E-06 43.2 10.3 100 196-297 11-134 (231)
310 PRK06603 enoyl-(acyl carrier p 95.1 0.18 3.8E-06 45.2 9.6 79 195-275 7-96 (260)
311 PRK07576 short chain dehydroge 95.1 0.21 4.7E-06 44.7 10.1 78 195-274 8-95 (264)
312 PLN02253 xanthoxin dehydrogena 95.1 0.15 3.2E-06 46.1 9.2 79 195-275 17-104 (280)
313 PRK05854 short chain dehydroge 95.1 0.19 4E-06 46.5 9.9 79 195-275 13-103 (313)
314 PRK08589 short chain dehydroge 95.1 0.16 3.5E-06 45.7 9.3 79 195-275 5-92 (272)
315 PRK08415 enoyl-(acyl carrier p 95.1 0.2 4.3E-06 45.3 9.9 102 195-299 4-145 (274)
316 PRK08643 acetoin reductase; Va 95.1 0.22 4.8E-06 44.2 10.2 78 196-275 2-89 (256)
317 PRK12481 2-deoxy-D-gluconate 3 95.1 0.15 3.3E-06 45.3 9.0 79 195-275 7-93 (251)
318 PRK08317 hypothetical protein; 95.1 0.13 2.9E-06 45.0 8.6 102 188-298 12-125 (241)
319 PRK07688 thiamine/molybdopteri 95.0 0.18 4E-06 47.0 9.8 34 196-229 24-57 (339)
320 PRK12367 short chain dehydroge 95.0 0.2 4.2E-06 44.5 9.6 75 195-275 13-89 (245)
321 PRK15469 ghrA bifunctional gly 95.0 0.16 3.4E-06 46.8 9.2 88 195-298 135-227 (312)
322 PRK07453 protochlorophyllide o 95.0 0.24 5.2E-06 45.9 10.6 78 195-274 5-92 (322)
323 PF00106 adh_short: short chai 95.0 0.21 4.6E-06 41.0 9.3 79 197-275 1-90 (167)
324 TIGR03206 benzo_BadH 2-hydroxy 95.0 0.22 4.8E-06 43.9 10.0 80 195-275 2-90 (250)
325 PRK08340 glucose-1-dehydrogena 95.0 0.22 4.8E-06 44.4 10.0 77 198-275 2-86 (259)
326 PF06325 PrmA: Ribosomal prote 95.0 0.074 1.6E-06 48.4 6.8 96 193-300 159-262 (295)
327 PRK07856 short chain dehydroge 95.0 0.13 2.8E-06 45.7 8.4 75 195-275 5-85 (252)
328 PRK07035 short chain dehydroge 95.0 0.18 3.9E-06 44.7 9.3 79 195-275 7-95 (252)
329 cd01483 E1_enzyme_family Super 95.0 0.31 6.7E-06 39.2 9.8 32 198-229 1-32 (143)
330 PRK06079 enoyl-(acyl carrier p 95.0 0.13 2.8E-06 45.8 8.4 79 195-275 6-93 (252)
331 PRK05875 short chain dehydroge 95.0 0.22 4.8E-06 44.9 10.0 79 195-275 6-96 (276)
332 PRK07063 short chain dehydroge 95.0 0.21 4.6E-06 44.5 9.7 79 195-275 6-96 (260)
333 PRK12823 benD 1,6-dihydroxycyc 95.0 0.16 3.4E-06 45.3 8.9 79 195-275 7-94 (260)
334 TIGR02355 moeB molybdopterin s 95.0 0.24 5.2E-06 43.8 9.8 33 197-229 25-57 (240)
335 PF02254 TrkA_N: TrkA-N domain 94.9 0.43 9.3E-06 36.7 10.3 92 199-296 1-95 (116)
336 PF02558 ApbA: Ketopantoate re 94.9 0.022 4.7E-07 46.4 3.0 96 199-299 1-103 (151)
337 PRK09242 tropinone reductase; 94.9 0.2 4.3E-06 44.6 9.5 79 195-275 8-98 (257)
338 COG1648 CysG Siroheme synthase 94.9 0.54 1.2E-05 40.6 11.6 116 195-321 11-127 (210)
339 PRK12937 short chain dehydroge 94.9 0.52 1.1E-05 41.4 12.1 80 195-275 4-93 (245)
340 KOG1201 Hydroxysteroid 17-beta 94.9 0.11 2.4E-06 46.6 7.5 80 194-275 36-124 (300)
341 PRK08226 short chain dehydroge 94.9 0.19 4.2E-06 44.8 9.4 79 195-275 5-92 (263)
342 PRK06114 short chain dehydroge 94.9 0.19 4.2E-06 44.6 9.3 79 195-275 7-96 (254)
343 PRK10538 malonic semialdehyde 94.9 0.21 4.5E-06 44.3 9.4 76 198-275 2-84 (248)
344 PRK12384 sorbitol-6-phosphate 94.9 0.26 5.6E-06 43.9 10.1 79 196-275 2-91 (259)
345 PRK08264 short chain dehydroge 94.9 0.15 3.3E-06 44.7 8.5 75 195-275 5-83 (238)
346 PF02670 DXP_reductoisom: 1-de 94.8 0.36 7.8E-06 38.0 9.4 95 199-295 1-119 (129)
347 PRK08328 hypothetical protein; 94.8 0.25 5.5E-06 43.4 9.6 34 196-229 27-60 (231)
348 PRK06720 hypothetical protein; 94.8 0.39 8.4E-06 40.0 10.2 80 195-275 15-103 (169)
349 PRK06124 gluconate 5-dehydroge 94.8 0.25 5.4E-06 43.9 9.7 79 195-275 10-98 (256)
350 PRK06701 short chain dehydroge 94.8 0.52 1.1E-05 42.9 12.0 81 194-275 44-134 (290)
351 PRK08690 enoyl-(acyl carrier p 94.8 0.24 5.3E-06 44.3 9.6 79 195-275 5-94 (261)
352 PRK07067 sorbitol dehydrogenas 94.8 0.23 5E-06 44.2 9.5 78 196-275 6-90 (257)
353 PRK07074 short chain dehydroge 94.8 0.25 5.4E-06 44.0 9.6 79 196-275 2-87 (257)
354 PRK06197 short chain dehydroge 94.8 0.26 5.7E-06 45.2 10.0 79 195-275 15-105 (306)
355 PRK08251 short chain dehydroge 94.7 0.24 5.2E-06 43.8 9.4 77 196-274 2-90 (248)
356 PF08704 GCD14: tRNA methyltra 94.7 0.083 1.8E-06 46.7 6.2 107 187-299 32-148 (247)
357 PRK08993 2-deoxy-D-gluconate 3 94.7 0.32 6.9E-06 43.2 10.2 80 195-275 9-95 (253)
358 COG2226 UbiE Methylase involve 94.7 0.59 1.3E-05 41.1 11.4 106 189-301 45-160 (238)
359 PRK06398 aldose dehydrogenase; 94.7 0.13 2.8E-06 46.0 7.6 74 195-275 5-82 (258)
360 COG1052 LdhA Lactate dehydroge 94.7 0.35 7.6E-06 44.7 10.5 89 194-298 144-237 (324)
361 PRK12826 3-ketoacyl-(acyl-carr 94.7 0.25 5.5E-06 43.5 9.5 79 195-275 5-93 (251)
362 PRK07577 short chain dehydroge 94.7 0.17 3.7E-06 44.2 8.2 73 196-275 3-78 (234)
363 COG2227 UbiG 2-polyprenyl-3-me 94.7 0.32 6.9E-06 42.4 9.4 95 194-296 58-160 (243)
364 PRK06101 short chain dehydroge 94.6 0.31 6.6E-06 43.0 9.8 75 197-274 2-80 (240)
365 PRK08644 thiamine biosynthesis 94.6 0.31 6.7E-06 42.2 9.5 34 196-229 28-61 (212)
366 PRK09186 flagellin modificatio 94.6 0.24 5.3E-06 43.9 9.3 78 195-274 3-92 (256)
367 PLN02928 oxidoreductase family 94.6 0.28 6.1E-06 45.9 9.9 96 195-298 158-263 (347)
368 PRK14192 bifunctional 5,10-met 94.6 0.31 6.7E-06 44.2 9.8 77 193-299 156-233 (283)
369 PF01596 Methyltransf_3: O-met 94.6 0.08 1.7E-06 45.5 5.7 104 191-299 41-157 (205)
370 PRK13243 glyoxylate reductase; 94.6 0.29 6.4E-06 45.6 9.9 37 195-232 149-185 (333)
371 PRK08277 D-mannonate oxidoredu 94.6 0.31 6.8E-06 43.9 10.0 78 195-274 9-96 (278)
372 PRK07666 fabG 3-ketoacyl-(acyl 94.6 0.26 5.6E-06 43.3 9.2 79 196-275 7-94 (239)
373 PF01210 NAD_Gly3P_dh_N: NAD-d 94.6 0.49 1.1E-05 38.8 10.2 84 198-288 1-91 (157)
374 PRK08085 gluconate 5-dehydroge 94.6 0.29 6.4E-06 43.4 9.6 79 195-275 8-96 (254)
375 PRK00312 pcm protein-L-isoaspa 94.6 0.31 6.8E-06 42.1 9.5 101 188-297 71-175 (212)
376 PLN02657 3,8-divinyl protochlo 94.5 0.29 6.4E-06 46.7 10.0 81 192-275 56-146 (390)
377 PLN02589 caffeoyl-CoA O-methyl 94.5 0.4 8.6E-06 42.5 10.1 102 191-297 75-190 (247)
378 PLN00203 glutamyl-tRNA reducta 94.5 0.15 3.2E-06 50.4 8.0 82 196-286 266-352 (519)
379 PRK07985 oxidoreductase; Provi 94.5 0.67 1.4E-05 42.3 12.0 79 195-275 48-138 (294)
380 PRK01581 speE spermidine synth 94.5 0.85 1.8E-05 42.7 12.4 99 194-298 149-269 (374)
381 PRK08762 molybdopterin biosynt 94.5 0.24 5.1E-06 47.1 9.2 35 195-229 134-168 (376)
382 PRK12936 3-ketoacyl-(acyl-carr 94.5 0.31 6.6E-06 42.9 9.5 80 195-275 5-90 (245)
383 PF00899 ThiF: ThiF family; I 94.5 0.32 6.9E-06 38.7 8.7 94 196-294 2-120 (135)
384 PRK06077 fabG 3-ketoacyl-(acyl 94.4 0.87 1.9E-05 40.2 12.4 102 196-300 6-143 (252)
385 cd00757 ThiF_MoeB_HesA_family 94.4 0.39 8.4E-06 42.2 9.8 33 196-228 21-53 (228)
386 PRK05690 molybdopterin biosynt 94.4 0.41 8.9E-06 42.5 10.1 33 196-228 32-64 (245)
387 PRK08159 enoyl-(acyl carrier p 94.4 0.36 7.8E-06 43.5 9.9 82 193-275 7-98 (272)
388 COG0569 TrkA K+ transport syst 94.4 0.42 9.2E-06 41.8 10.0 74 198-276 2-77 (225)
389 PRK07984 enoyl-(acyl carrier p 94.4 0.39 8.4E-06 43.1 10.0 78 195-274 5-93 (262)
390 PRK07102 short chain dehydroge 94.4 0.42 9.1E-06 42.1 10.1 76 197-275 2-86 (243)
391 PRK06935 2-deoxy-D-gluconate 3 94.4 0.3 6.5E-06 43.5 9.2 79 195-275 14-101 (258)
392 PRK06484 short chain dehydroge 94.4 0.23 5E-06 49.3 9.3 79 195-275 4-89 (520)
393 PRK01438 murD UDP-N-acetylmura 94.3 0.48 1E-05 46.6 11.3 70 195-276 15-89 (480)
394 PRK08945 putative oxoacyl-(acy 94.3 0.42 9.1E-06 42.2 10.0 83 192-275 8-102 (247)
395 KOG1610 Corticosteroid 11-beta 94.3 0.95 2.1E-05 41.0 11.9 109 193-302 26-169 (322)
396 PLN00141 Tic62-NAD(P)-related 94.3 0.34 7.3E-06 43.1 9.3 100 195-299 16-133 (251)
397 TIGR03215 ac_ald_DH_ac acetald 94.3 0.68 1.5E-05 41.9 11.2 89 198-298 3-95 (285)
398 PRK14027 quinate/shikimate deh 94.2 0.19 4.1E-06 45.6 7.6 44 195-238 126-169 (283)
399 PF01408 GFO_IDH_MocA: Oxidore 94.2 1.1 2.4E-05 34.5 11.1 89 198-299 2-94 (120)
400 TIGR01963 PHB_DH 3-hydroxybuty 94.2 0.32 7E-06 43.0 9.1 78 196-275 1-88 (255)
401 PRK10669 putative cation:proto 94.2 0.35 7.6E-06 48.6 10.2 75 197-276 418-492 (558)
402 COG0421 SpeE Spermidine syntha 94.2 0.42 9.1E-06 43.2 9.6 97 197-296 78-189 (282)
403 PRK07340 ornithine cyclodeamin 94.2 0.28 6E-06 45.1 8.7 94 194-300 123-220 (304)
404 TIGR02622 CDP_4_6_dhtase CDP-g 94.2 0.14 3E-06 48.0 6.9 77 195-275 3-85 (349)
405 PLN02823 spermine synthase 94.2 0.48 1E-05 44.1 10.2 97 195-296 103-219 (336)
406 PRK14188 bifunctional 5,10-met 94.1 0.4 8.7E-06 43.6 9.4 94 175-300 137-233 (296)
407 PRK12743 oxidoreductase; Provi 94.1 0.37 7.9E-06 42.9 9.2 78 196-275 2-90 (256)
408 PRK14194 bifunctional 5,10-met 94.1 0.42 9E-06 43.5 9.4 94 175-299 138-233 (301)
409 PRK08303 short chain dehydroge 94.0 0.39 8.6E-06 44.1 9.5 34 195-229 7-41 (305)
410 PRK07791 short chain dehydroge 94.0 0.45 9.7E-06 43.3 9.7 36 194-230 4-40 (286)
411 PRK06113 7-alpha-hydroxysteroi 94.0 0.53 1.1E-05 41.8 9.9 79 195-275 10-98 (255)
412 TIGR00417 speE spermidine synt 94.0 0.55 1.2E-05 42.4 10.0 99 194-297 71-186 (270)
413 cd01492 Aos1_SUMO Ubiquitin ac 93.9 0.58 1.3E-05 40.0 9.6 90 196-288 21-133 (197)
414 TIGR01505 tartro_sem_red 2-hyd 93.9 0.58 1.3E-05 42.7 10.2 43 198-241 1-43 (291)
415 PRK01683 trans-aconitate 2-met 93.9 0.74 1.6E-05 41.1 10.7 100 188-297 24-130 (258)
416 PRK00258 aroE shikimate 5-dehy 93.9 0.18 3.9E-06 45.7 6.7 74 194-275 121-195 (278)
417 PF01113 DapB_N: Dihydrodipico 93.9 0.81 1.7E-05 35.9 9.6 92 198-300 2-100 (124)
418 PF10727 Rossmann-like: Rossma 93.9 0.2 4.4E-06 39.4 6.1 78 197-288 11-90 (127)
419 TIGR02354 thiF_fam2 thiamine b 93.9 0.7 1.5E-05 39.6 10.0 34 196-229 21-54 (200)
420 PRK06523 short chain dehydroge 93.8 0.3 6.5E-06 43.5 8.1 75 195-274 8-86 (260)
421 PRK12747 short chain dehydroge 93.8 1.3 2.8E-05 39.2 12.2 104 195-300 3-147 (252)
422 PF03807 F420_oxidored: NADP o 93.8 2 4.2E-05 31.7 12.1 84 198-295 1-92 (96)
423 TIGR00477 tehB tellurite resis 93.8 0.28 6E-06 41.9 7.4 98 189-297 24-133 (195)
424 PRK05557 fabG 3-ketoacyl-(acyl 93.8 0.49 1.1E-05 41.5 9.3 79 195-275 4-93 (248)
425 PRK07066 3-hydroxybutyryl-CoA 93.8 1.5 3.2E-05 40.6 12.5 39 197-236 8-46 (321)
426 PRK07097 gluconate 5-dehydroge 93.7 0.52 1.1E-05 42.1 9.6 79 195-275 9-97 (265)
427 PRK10792 bifunctional 5,10-met 93.7 0.54 1.2E-05 42.4 9.2 93 176-299 139-233 (285)
428 PRK08278 short chain dehydroge 93.7 0.4 8.8E-06 43.2 8.8 36 195-231 5-41 (273)
429 PRK03562 glutathione-regulated 93.7 0.52 1.1E-05 47.9 10.3 93 196-294 400-495 (621)
430 PRK14103 trans-aconitate 2-met 93.6 0.97 2.1E-05 40.3 11.0 97 188-296 22-125 (255)
431 TIGR00138 gidB 16S rRNA methyl 93.6 0.52 1.1E-05 39.7 8.6 93 196-296 43-141 (181)
432 cd01487 E1_ThiF_like E1_ThiF_l 93.6 0.57 1.2E-05 39.2 8.8 33 198-230 1-33 (174)
433 PRK14982 acyl-ACP reductase; P 93.5 0.44 9.6E-06 44.3 8.7 94 194-300 153-249 (340)
434 PRK05650 short chain dehydroge 93.5 0.49 1.1E-05 42.4 9.1 76 198-275 2-87 (270)
435 PRK07424 bifunctional sterol d 93.5 0.53 1.1E-05 45.1 9.5 74 195-275 177-255 (406)
436 PRK08300 acetaldehyde dehydrog 93.5 0.89 1.9E-05 41.4 10.5 93 197-298 5-101 (302)
437 PRK07417 arogenate dehydrogena 93.5 0.58 1.2E-05 42.4 9.4 43 198-241 2-44 (279)
438 PRK05447 1-deoxy-D-xylulose 5- 93.5 0.93 2E-05 42.7 10.8 97 197-295 2-120 (385)
439 PRK05600 thiamine biosynthesis 93.5 0.61 1.3E-05 44.1 9.8 34 196-229 41-74 (370)
440 PRK13984 putative oxidoreducta 93.5 0.43 9.2E-06 48.5 9.4 77 193-275 280-378 (604)
441 PRK08287 cobalt-precorrin-6Y C 93.5 1.5 3.2E-05 37.0 11.4 100 189-297 25-131 (187)
442 PRK08063 enoyl-(acyl carrier p 93.5 0.54 1.2E-05 41.5 9.1 80 195-275 3-92 (250)
443 PF05368 NmrA: NmrA-like famil 93.5 0.44 9.6E-06 41.7 8.5 71 199-275 1-74 (233)
444 PLN02520 bifunctional 3-dehydr 93.5 0.39 8.4E-06 47.8 8.8 71 195-275 378-449 (529)
445 PF02737 3HCDH_N: 3-hydroxyacy 93.4 0.67 1.5E-05 39.0 9.1 40 198-238 1-40 (180)
446 PRK08642 fabG 3-ketoacyl-(acyl 93.4 0.54 1.2E-05 41.6 9.0 77 196-274 5-90 (253)
447 PRK06940 short chain dehydroge 93.4 0.67 1.4E-05 41.8 9.7 77 196-275 2-86 (275)
448 PRK09135 pteridine reductase; 93.4 0.63 1.4E-05 40.9 9.4 79 195-275 5-95 (249)
449 COG2084 MmsB 3-hydroxyisobutyr 93.4 0.93 2E-05 41.0 10.3 88 198-299 2-97 (286)
450 PRK14618 NAD(P)H-dependent gly 93.4 1 2.2E-05 41.9 11.2 90 197-298 5-105 (328)
451 PRK11559 garR tartronate semia 93.4 0.55 1.2E-05 43.0 9.2 43 198-241 4-46 (296)
452 PRK12480 D-lactate dehydrogena 93.4 0.9 2E-05 42.3 10.6 86 195-298 145-235 (330)
453 PRK14191 bifunctional 5,10-met 93.4 0.81 1.8E-05 41.3 9.9 95 175-300 136-232 (285)
454 PRK08594 enoyl-(acyl carrier p 93.4 0.6 1.3E-05 41.7 9.3 78 195-274 6-96 (257)
455 PLN03013 cysteine synthase 93.4 1.8 4E-05 41.5 12.8 58 188-245 166-226 (429)
456 PRK07775 short chain dehydroge 93.4 0.95 2.1E-05 40.7 10.7 80 195-275 9-97 (274)
457 PRK11036 putative S-adenosyl-L 93.4 0.95 2.1E-05 40.4 10.5 96 194-296 43-148 (255)
458 PRK05597 molybdopterin biosynt 93.4 0.57 1.2E-05 44.1 9.3 35 196-230 28-62 (355)
459 PRK06522 2-dehydropantoate 2-r 93.3 0.42 9E-06 43.8 8.4 92 198-297 2-100 (304)
460 PRK12938 acetyacetyl-CoA reduc 93.3 0.72 1.6E-05 40.6 9.7 79 195-275 2-91 (246)
461 PRK03659 glutathione-regulated 93.3 0.63 1.4E-05 47.1 10.2 93 197-295 401-496 (601)
462 PLN02986 cinnamyl-alcohol dehy 93.3 0.53 1.2E-05 43.5 9.1 38 195-233 4-42 (322)
463 PRK06171 sorbitol-6-phosphate 93.3 0.33 7.1E-06 43.4 7.5 76 195-275 8-87 (266)
464 PF02719 Polysacc_synt_2: Poly 93.2 0.71 1.5E-05 41.8 9.2 77 199-275 1-87 (293)
465 TIGR02415 23BDH acetoin reduct 93.2 0.62 1.3E-05 41.2 9.0 77 197-275 1-87 (254)
466 PRK06997 enoyl-(acyl carrier p 93.2 0.67 1.4E-05 41.5 9.2 79 195-275 5-94 (260)
467 PF01370 Epimerase: NAD depend 93.2 0.59 1.3E-05 40.7 8.8 72 199-275 1-75 (236)
468 PLN02244 tocopherol O-methyltr 93.1 0.5 1.1E-05 44.2 8.6 98 194-298 117-224 (340)
469 PLN02256 arogenate dehydrogena 93.1 0.73 1.6E-05 42.3 9.5 45 195-241 35-79 (304)
470 PTZ00098 phosphoethanolamine N 93.1 0.97 2.1E-05 40.6 10.1 106 187-299 44-158 (263)
471 PRK07370 enoyl-(acyl carrier p 93.1 0.55 1.2E-05 41.9 8.5 102 195-299 5-149 (258)
472 PRK11064 wecC UDP-N-acetyl-D-m 93.0 1.5 3.2E-05 42.3 11.9 73 197-276 4-86 (415)
473 PRK07792 fabG 3-ketoacyl-(acyl 93.0 0.84 1.8E-05 41.9 9.9 78 195-275 11-99 (306)
474 PRK05565 fabG 3-ketoacyl-(acyl 93.0 0.84 1.8E-05 40.1 9.6 78 196-275 5-93 (247)
475 PRK06436 glycerate dehydrogena 93.0 0.6 1.3E-05 42.8 8.7 35 195-230 121-155 (303)
476 PRK13255 thiopurine S-methyltr 93.0 0.83 1.8E-05 39.7 9.2 101 192-296 34-154 (218)
477 PRK06849 hypothetical protein; 93.0 1.1 2.3E-05 42.9 10.7 93 195-289 3-100 (389)
478 PRK06141 ornithine cyclodeamin 92.9 1.4 3.1E-05 40.7 11.2 93 194-299 123-221 (314)
479 PRK13403 ketol-acid reductoiso 92.9 1.2 2.7E-05 40.9 10.3 82 194-289 14-99 (335)
480 PRK00121 trmB tRNA (guanine-N( 92.9 2 4.3E-05 36.8 11.3 98 195-297 40-156 (202)
481 PRK12548 shikimate 5-dehydroge 92.8 0.45 9.7E-06 43.4 7.6 36 195-230 125-160 (289)
482 PRK08223 hypothetical protein; 92.8 0.74 1.6E-05 41.6 8.8 34 196-229 27-60 (287)
483 TIGR01829 AcAcCoA_reduct aceto 92.8 0.83 1.8E-05 40.0 9.3 77 197-275 1-88 (242)
484 PF01564 Spermine_synth: Sperm 92.8 0.22 4.9E-06 44.2 5.5 97 195-297 76-191 (246)
485 COG1090 Predicted nucleoside-d 92.8 0.22 4.9E-06 44.2 5.3 66 199-276 1-67 (297)
486 TIGR02632 RhaD_aldol-ADH rhamn 92.8 0.78 1.7E-05 47.2 10.1 79 195-275 413-503 (676)
487 PRK09496 trkA potassium transp 92.8 0.95 2.1E-05 44.1 10.4 86 198-288 2-88 (453)
488 TIGR00872 gnd_rel 6-phosphoglu 92.8 0.89 1.9E-05 41.7 9.5 43 198-241 2-44 (298)
489 PTZ00079 NADP-specific glutama 92.7 2.9 6.3E-05 40.3 13.0 35 194-229 235-270 (454)
490 COG0673 MviM Predicted dehydro 92.7 3.3 7.1E-05 38.5 13.6 134 198-345 5-146 (342)
491 COG1893 ApbA Ketopantoate redu 92.7 0.55 1.2E-05 43.2 8.1 96 198-296 2-100 (307)
492 PRK12749 quinate/shikimate deh 92.7 0.43 9.4E-06 43.4 7.3 36 195-230 123-158 (288)
493 PRK14106 murD UDP-N-acetylmura 92.7 0.68 1.5E-05 45.1 9.2 70 195-275 4-78 (450)
494 PRK12745 3-ketoacyl-(acyl-carr 92.7 0.78 1.7E-05 40.6 8.9 77 197-275 3-90 (256)
495 PF08659 KR: KR domain; Inter 92.6 0.67 1.4E-05 39.0 8.0 45 198-242 2-54 (181)
496 PRK12814 putative NADPH-depend 92.6 0.62 1.3E-05 47.7 9.1 77 194-276 191-289 (652)
497 PRK06153 hypothetical protein; 92.6 1.7 3.7E-05 41.0 11.0 100 195-299 175-300 (393)
498 cd05212 NAD_bind_m-THF_DH_Cycl 92.6 1.7 3.7E-05 34.9 9.7 83 188-300 19-103 (140)
499 PRK05855 short chain dehydroge 92.6 0.68 1.5E-05 46.5 9.4 79 195-275 314-402 (582)
500 PRK08220 2,3-dihydroxybenzoate 92.6 0.68 1.5E-05 40.9 8.4 74 195-275 7-86 (252)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.7e-67 Score=461.81 Aligned_cols=366 Identities=48% Similarity=0.864 Sum_probs=347.2
Q ss_pred hhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCC
Q 016933 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 9 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
|++||.+.+++++||+++++++++|++||||||+.++|+|++|...++|..+.. +|.++|||++|+|++||++|+++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 467999999999999999999999999999999999999999999999988877 9999999999999999999999999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
||+|+..+..+||.|.+|++|.+++|...+...-.| ..++|..+++.+|...+++.|.++|++|.++++..+++++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG-~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKG-TMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccc-cccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 999999999999999999999999999887665556 3489999999999999999999999999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
+++.++.+.|...|.+.+....+++++|+++.|+|.|++|++++|-|+..|+++||+++.+++|++++++||+++++|..
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCC
Q 016933 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 328 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 328 (380)
+.+ +..+.+.+++++++|++|||+|+.+.+.+++++..+ ||+.+++|........++++..+....+++|+.++....
T Consensus 239 ~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p 316 (366)
T COG1062 239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP 316 (366)
T ss_pred hhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence 763 488999999999999999999999999999999999 599999999887778888888888779999999999999
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
+.++.++++++++|++++++++++.++|+|+++||+.+.+++..|-||.+
T Consensus 317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 99999999999999999999999999999999999999999999988864
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.6e-66 Score=464.96 Aligned_cols=335 Identities=35% Similarity=0.549 Sum_probs=301.7
Q ss_pred hhhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCC
Q 016933 8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 8 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
+++|||+++.++++|+++++++.|.|+++||+|+|+|+|+|++|++.++|.++...+|++||||++|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46899999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred CCCEEEe-cCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCC
Q 016933 88 VGDHVLP-VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (380)
Q Consensus 88 ~GdrV~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 166 (380)
+||||.+ ++..+|++|+||++|++++|++.... |+. -+|+||||+++++.+++++|+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~---gy~-------------------~~GGyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT---GYT-------------------TDGGYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccc---cee-------------------ecCcceeEEEEchHHeEECCC
Confidence 9999988 99999999999999999999997776 544 135999999999999999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
++++++||.+.|+..|+|++| +..+++||++|+|+|.|++|++|+|+||++|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999996 55999999999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecC
Q 016933 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGN 325 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~ 325 (380)
..+.+ +.+.+++. +|+++|+++ +..++.+++.|+++ |+++++|..........+.. .++++++|.|+..++
T Consensus 217 ~~~~~--~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~ 288 (339)
T COG1064 217 SSDSD--ALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT 288 (339)
T ss_pred cCCch--hhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence 77433 66666553 999999999 79999999999997 99999999852222334333 345999999998765
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 379 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~ 379 (380)
+.++++++++..++++.+. +.+.++++|+++|++.|.+++. +|.||++.
T Consensus 289 ---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 ---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred ---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 5689999999999988765 4479999999999999999988 69999874
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-65 Score=441.89 Aligned_cols=374 Identities=56% Similarity=1.017 Sum_probs=357.5
Q ss_pred cchhhhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCC
Q 016933 5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS 84 (380)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~ 84 (380)
...+.++||.+.+++++||.++++.+++|+..||+||+.++++|++|...|.|..+...+|.++|||++|+|+.+|.+|+
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 34577899999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred CCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeC
Q 016933 85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 164 (380)
Q Consensus 85 ~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~ 164 (380)
.|++||+|+..+...|+.|.+|+++..|+|...+.....+....||.+++..+|+.++++.+.-+|+||.+++...+.++
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence 99999999999999999999999999999999998877788888999999999999999999999999999999999999
Q ss_pred CCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE
Q 016933 165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (380)
Q Consensus 165 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v 244 (380)
++..+++.++.|.|..+|+|.|.+..+.+++|+++.|+|-|++|+++++-||+.|+.++|+++.+++|.+.++++|++++
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~ 241 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEF 241 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeec
Q 016933 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 324 (380)
Q Consensus 245 i~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 324 (380)
+|+.+......+.+.+.|++++|+.|||+|+.+++.+++.+...+||.-+++|.......+...+..+.+++++.|+.++
T Consensus 242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FG 321 (375)
T KOG0022|consen 242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFG 321 (375)
T ss_pred cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecc
Confidence 99985444588899999999999999999999999999999999999999999988788888888888899999999999
Q ss_pred CCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 325 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
.++.+.++..+++.+.++++.++++++|.+||+++++||+.|.+++..|.|+.+
T Consensus 322 G~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 322 GFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred cccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 999999999999999999999999999999999999999999999999998864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-59 Score=408.76 Aligned_cols=343 Identities=27% Similarity=0.452 Sum_probs=300.3
Q ss_pred hhhhhhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccchhhccCCCC---CCCCccccccccEEEEEeCCCCC
Q 016933 9 LTCKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVS 84 (380)
Q Consensus 9 ~~~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~---~~~p~v~G~e~vG~V~~vG~~v~ 84 (380)
.+|+|+++...+. ++++++++|++ .|+||+|++.++|||.+|++++...+.. .+.|+++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 3589999988887 99999999987 8999999999999999999999875433 34899999999999999999999
Q ss_pred CCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeC
Q 016933 85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 164 (380)
Q Consensus 85 ~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~ 164 (380)
++++||||++.|..+|+.|++|++|+||.|+...+. +.... +|++++|++.++++++++
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~------------------~G~la~y~~~~~dfc~KL 140 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPV------------------DGTLAEYYVHPADFCYKL 140 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCc------------------CCceEEEEEechHheeeC
Confidence 999999999999999999999999999999999887 33322 259999999999999999
Q ss_pred CCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE
Q 016933 165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (380)
Q Consensus 165 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v 244 (380)
||++|++++|.+. +++++|+| .+++.+++|+++||+|+|++|+++...||++|+.+|+.++..+.|+++++++|++.+
T Consensus 141 Pd~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~ 218 (354)
T KOG0024|consen 141 PDNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT 218 (354)
T ss_pred CCCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence 9999999998877 79999999 688999999999999999999999999999999999999999999999999999988
Q ss_pred ecCCCCC--ccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEee
Q 016933 245 VNTSEHD--RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 321 (380)
Q Consensus 245 i~~~~~~--~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 321 (380)
.+....+ ..+.+.++...+. .+|+.|||+|....++.++.+++.+ |+++++|+.....+++.... ..+++.+.|+
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v-~~kE~~~~g~ 296 (354)
T KOG0024|consen 219 DPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDV-ALKEVDLRGS 296 (354)
T ss_pred eeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhh-hhheeeeeee
Confidence 7665543 3455556665554 6999999999988999999999997 99999998754444443222 3499999998
Q ss_pred eecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEecCC
Q 016933 322 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISMED 380 (380)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~--~Kvvi~~~~ 380 (380)
+-+. ..++..+++++++|++++++++++.|+++++.+||+.++.+.. .|+++...+
T Consensus 297 fry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 297 FRYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 7432 2479999999999999999999999999999999999998875 599998753
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-59 Score=406.41 Aligned_cols=349 Identities=28% Similarity=0.462 Sum_probs=300.3
Q ss_pred CCCccchhhhhhhhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEE
Q 016933 1 MSSTAGLILTCKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVES 78 (380)
Q Consensus 1 m~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~ 78 (380)
|++ ++.|.++++|.++++++ ++++.+++.|+|+++||+|+++|||||++|++.+.|.++...+|.|+|||++|+|++
T Consensus 1 ~~~-~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvk 79 (360)
T KOG0023|consen 1 MSS-MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVK 79 (360)
T ss_pred CCc-ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEE
Confidence 444 66799999999999999 577799999999999999999999999999999999998899999999999999999
Q ss_pred eCCCCCCCCCCCEE-EecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEe
Q 016933 79 VGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH 157 (380)
Q Consensus 79 vG~~v~~~~~GdrV-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~ 157 (380)
+|++|++|++|||| +.....+|+.|++|..+++++|+...+. +.|+. .|| ...+|+||+|++++
T Consensus 80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~-~DG-------------t~~~ggf~~~~~v~ 144 (360)
T KOG0023|consen 80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVY-HDG-------------TITQGGFQEYAVVD 144 (360)
T ss_pred ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccc-cCC-------------CCccCccceeEEEe
Confidence 99999999999999 5677889999999999999999964332 22332 333 23357899999999
Q ss_pred ccceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHH
Q 016933 158 SGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEA 236 (380)
Q Consensus 158 ~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~-~~~~~~ 236 (380)
+.+++++|++++.+.||.+.|+..|+|.+| ...++.||+++.|.|+|++|.+++|+||++|. +|++++++. +|.+.+
T Consensus 145 ~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~ 222 (360)
T KOG0023|consen 145 EVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAI 222 (360)
T ss_pred eeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHH
Confidence 999999999999999999999999999995 67888899999999997799999999999999 999999987 778888
Q ss_pred HhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccc
Q 016933 237 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNE 315 (380)
Q Consensus 237 ~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~ 315 (380)
+.||++..++..++ .++.+++...+++++|-+.+. ....++.++.+++.+ |++|++|.+.. .+.+...++ .+.
T Consensus 223 ~~LGAd~fv~~~~d-~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~ 296 (360)
T KOG0023|consen 223 KSLGADVFVDSTED-PDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGR 296 (360)
T ss_pred HhcCcceeEEecCC-HHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhccc
Confidence 88999998887632 237888888777776766665 446789999999997 99999999874 444444433 488
Q ss_pred cEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 016933 316 RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 379 (380)
Q Consensus 316 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~ 379 (380)
++|.||..++ +.+.++++++...+.+... .+..+++++++||+.|++++. .|.||+++
T Consensus 297 ~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 297 KSIKGSIVGS---RKETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred EEEEeecccc---HHHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 9999999876 4689999999999987665 578899999999999999998 69999875
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.5e-56 Score=423.58 Aligned_cols=377 Identities=53% Similarity=1.021 Sum_probs=310.0
Q ss_pred CCccchhhhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeC
Q 016933 2 SSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVG 80 (380)
Q Consensus 2 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG 80 (380)
|.|.+.+++|||+++.++++++++++++.|+|+++||+|||+++|||++|+..+.|... ...+|.++|||++|+|+++|
T Consensus 2 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG 81 (381)
T PLN02740 2 SETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVG 81 (381)
T ss_pred ccccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeC
Confidence 34455778999999999887799999999999999999999999999999999888653 23578999999999999999
Q ss_pred CCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccC--CCccccccCCcceeeEEEEec
Q 016933 81 EGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN--GEPVNHFLGTSTFSEYTVVHS 158 (380)
Q Consensus 81 ~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~--g~~~~~~~~~G~~a~~~~v~~ 158 (380)
+++++|++||||++.+..+|+.|.+|++++++.|.+....+..+....+|..++... +....+....|+|+||+.++.
T Consensus 82 ~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~ 161 (381)
T PLN02740 82 EGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS 161 (381)
T ss_pred CCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence 999999999999999999999999999999999998664311100000110000000 000011122479999999999
Q ss_pred cceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 016933 159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 159 ~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~ 238 (380)
+.++++|+++++++++.+++++.|||+++.+.+.+++|++|||+|+|++|++++|+||.+|+.+|++++++++|++++++
T Consensus 162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~ 241 (381)
T PLN02740 162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241 (381)
T ss_pred HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH
Confidence 99999999999999999999999999987778899999999999999999999999999999679999999999999999
Q ss_pred cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEE
Q 016933 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL 318 (380)
Q Consensus 239 lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 318 (380)
+|++.++++++.+..+.+.+++++++++|++||++|.+..+..+++++++++|+++++|.......+.+....+.+++++
T Consensus 242 ~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i 321 (381)
T PLN02740 242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSI 321 (381)
T ss_pred cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeE
Confidence 99999998776433477778887766899999999987889999999988339999999875333344444334478899
Q ss_pred EeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 319 KGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 319 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
.|+..+.+....++.++++++.++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 322 TGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred EEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 998766554445689999999999998888899999999999999999988878999874
No 7
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.5e-55 Score=417.10 Aligned_cols=368 Identities=78% Similarity=1.307 Sum_probs=308.5
Q ss_pred hhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCC
Q 016933 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 9 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
++|||+++.+++++++++++++|+|+++||+||+.+++||++|+..+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 47999999988888999999999999999999999999999999999887665677999999999999999999999999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
||||++.+..+|+.|.+|+++.+++|.+.......|....++...+...|...+++...|+|+||+.++.+.++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 99999999999999999999999999986443222322111111122222222222234789999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
++++++.+++.+.|||.++.+...+++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|++.++++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999999999999887888999999999999999999999999999987799999999999999999999999876
Q ss_pred CCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCC
Q 016933 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 328 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 328 (380)
+.+..+.+.+++++++++|++||++|....+..+++++++++|+++++|.......+.+....+.+++++.|+..+.+..
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 320 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP 320 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence 53334777788877778999999999877889999999992299999998753333444443345789999987766555
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 376 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi 376 (380)
+.+++++++++.++++++.+++++.|+|+|+++||+.+++++..|+++
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 321 KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 567899999999999888878899999999999999999998889887
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.1e-55 Score=415.31 Aligned_cols=367 Identities=49% Similarity=0.923 Sum_probs=301.3
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++...++++++++++.|+|+++||+|||.++|+|++|+..+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 78999888888899999999999999999999999999999999888765556799999999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
||++.+..+||.|.+|+.|.+++|.+.......|+. .+|..++..+|....+..+.|+|+||+.+|.+.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999999999999999999999999874322111221 1221122122211122223579999999999999999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~ 250 (380)
++++.+++++.|||+++.+.+.+++|++|||+|+|++|++++|+||.+|+.+|++++++++|+++++++|++.++++++.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998778899999999999999999999999999999779999999999999999999999987753
Q ss_pred CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCCCC
Q 016933 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT 330 (380)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 330 (380)
+..+.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+......+.++..+.++..+......
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 33467778887777899999999987888999999988339999999764222233333333344456776544333345
Q ss_pred ChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 331 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
++.++++++.++++++.+++++.|+|+|+++|++.+.+++..|++|++
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 689999999999998888899999999999999999888778999875
No 9
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=4.5e-55 Score=413.88 Aligned_cols=361 Identities=40% Similarity=0.719 Sum_probs=300.9
Q ss_pred hhhhhhccCCC--------CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCC
Q 016933 11 CKAAVAWEAGK--------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82 (380)
Q Consensus 11 ~~a~~~~~~~~--------~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~ 82 (380)
|||+++.++|. .+++++++.|+|+++||+|||.+++||++|+.++.|..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 78999988763 389999999999999999999999999999999888653 356899999999999999999
Q ss_pred CCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceE
Q 016933 83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA 162 (380)
Q Consensus 83 v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~ 162 (380)
+++|++||||++.+...|+.|.+|++|++++|.+.......|.. .+|...+..++..+.+..+.|+|+||+.++.+.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999988889999999999999999876543222221 11211112222111122234799999999999999
Q ss_pred eCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 016933 163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242 (380)
Q Consensus 163 ~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~ 242 (380)
++|+++++++|+.+++++.|||.++.+.+.+++|++|||+|+|++|++++|+||.+|+++|++++++++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999987888999999999999999999999999999996799999999999999999999
Q ss_pred eEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEee
Q 016933 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGT 321 (380)
Q Consensus 243 ~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 321 (380)
+++++.+.+ +.+.+++++++++|++||++|.+..+..++++++++ |+++.+|...+.....++... +.+++++.|+
T Consensus 239 ~~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 239 ATVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred eEeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 999887654 778888887778999999999878899999999997 999999986533334444433 3489999998
Q ss_pred eecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 016933 322 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 376 (380)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi 376 (380)
+.+.+...+++.+++++++++++++.+++++.|+|+|+++||+.+.+++..|.||
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 7665444457899999999999988888999999999999999999988864443
No 10
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=5.1e-55 Score=413.07 Aligned_cols=367 Identities=56% Similarity=0.988 Sum_probs=304.2
Q ss_pred hhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 10 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
+|||+++...++++++++++.|.|+++||+|||+++|+|++|+.++.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999988888889999999999999999999999999999999988876555689999999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
|||++.+..+|++|.+|++++++.|.+.......|.. .+|..++..+|....++.+.|+|+||+.++.+.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999999999999999999999999875422111221 111111222222222233457999999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~ 249 (380)
+++++.+++++.|||+++.+.+.+++|++|||+|+|++|++++|+||.+|+.+|++++++++|+++++++|+++++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999998777888999999999999999999999999999977999999999999999999999998876
Q ss_pred CCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCCC
Q 016933 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 329 (380)
Q Consensus 250 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 329 (380)
.+..+.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+......+.+...+.++..+.+...
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 53347788888877789999999998778999999998734999999976422223333333334456777766555555
Q ss_pred CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 016933 330 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 377 (380)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~ 377 (380)
+++.+++++++++++++.++++++|+|+|+++||+.+.+++..|++|+
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 678999999999999888889999999999999999998887899875
No 11
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.1e-55 Score=412.18 Aligned_cols=371 Identities=56% Similarity=1.019 Sum_probs=302.8
Q ss_pred cchhh--hhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCC
Q 016933 5 AGLIL--TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82 (380)
Q Consensus 5 ~~~~~--~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~ 82 (380)
.+.|. .|||+++.++++.++++++++|+|+++||+|||.++|+|++|+..+.+.. .+|.++|||++|+|+++|++
T Consensus 5 ~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~ 81 (378)
T PLN02827 5 ISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEG 81 (378)
T ss_pred ccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCC
Confidence 34454 59999998877679999999999999999999999999999999887632 46889999999999999999
Q ss_pred CCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceE
Q 016933 83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA 162 (380)
Q Consensus 83 v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~ 162 (380)
+++|++||||++.+..+|+.|.+|+++++++|.+.... ..|....+....+..+|..+.++...|+|+||+.++.+.++
T Consensus 82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~ 160 (378)
T PLN02827 82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
T ss_pred CcccCCCCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheE
Confidence 99999999999999999999999999999999864321 00111001111111112111111224799999999999999
Q ss_pred eCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 016933 163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242 (380)
Q Consensus 163 ~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~ 242 (380)
++|+++++++++.+++++.++|.++++.+++++|++|||+|+|.+|++++|+|+.+|+.+|++++++++|.++++++|++
T Consensus 161 ~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~ 240 (378)
T PLN02827 161 KVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVT 240 (378)
T ss_pred ECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc
Confidence 99999999999999988899998777778899999999999999999999999999996788888899999999999999
Q ss_pred eEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeee
Q 016933 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF 322 (380)
Q Consensus 243 ~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 322 (380)
+++++++.+..+.+.+++++++++|++||++|.+..+..+++.+++++|+++.+|.......+......+.+++++.|+.
T Consensus 241 ~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 320 (378)
T PLN02827 241 DFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSL 320 (378)
T ss_pred EEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeee
Confidence 99988764334777788877768999999999877889999999993399999998653222222122345899999987
Q ss_pred ecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 016933 323 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 379 (380)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~~ 379 (380)
.+.+....++.+++++++++++++.+++++.|+|+++.+|++.+++++..|+||.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 321 FGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred cCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 765544557899999999999988778999999999999999999988889999875
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=7.6e-54 Score=403.72 Aligned_cols=356 Identities=37% Similarity=0.630 Sum_probs=299.5
Q ss_pred hhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 10 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
||||+++.+++++++++++++|+|+++||+|||.++++|++|+.++.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 699999999998899999999999999999999999999999999887543 3478999999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
|||++.+..+|+.|.+|++|.+++|...... ..+....+ |.......+.|+|+||+.++...++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~--------g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTD--------GTELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccc-cccccccc--------CcccccccccccccceEEEehhheEECCCCCC
Confidence 9999999999999999999999999753211 00000000 10000011247999999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~ 249 (380)
+++++.+++.+.++|.++.+.+.+++|++|||+|+|++|++++|+||.+|+.+|++++++++|+++++++|+++++++++
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988777888999999999999999999999999999966999999999999999999999998876
Q ss_pred CCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCC
Q 016933 250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYK 327 (380)
Q Consensus 250 ~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~ 327 (380)
.+ +.+.+++.+++ ++|++||++|++..+..++++++++ |+++.+|.........++.. .+.+++++.+++.+...
T Consensus 231 ~~--~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 231 TD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred cC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 55 77888888876 8999999999877899999999997 99999998653333344432 33478899888654333
Q ss_pred CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 328 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
..+++++++++++++++++.++++++|+++|+++|++.+++++..|++|.+
T Consensus 308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 345788999999999998888899999999999999999988878888764
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=4.9e-53 Score=399.07 Aligned_cols=365 Identities=58% Similarity=1.010 Sum_probs=303.3
Q ss_pred hhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCC
Q 016933 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 9 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
++|||+++.+.++++++++++.|.|+++||+||++++++|++|+..+.|..+ ..+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 4689999988887899999999999999999999999999999999887554 457899999999999999999999999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
||||++.+..+|++|.+|++|.+++|++....+. |.. .++..++...|.....+.+.|+|+||+.++.+.++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRANES-GLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccccc-ccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 9999999999999999999999999998654311 221 11211222222222222235799999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
++++++.+++++.|||+++.+.+.+++|++|||+|+|.+|++++|+|+.+|+.+|++++++++|++.++++|++++++..
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999877788899999999999999999999999999997799999999999999999999999877
Q ss_pred CCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCC
Q 016933 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 328 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 328 (380)
+.+..+.+.+++++++++|++||++|....+..+++++++++|+++.+|...+ ....+....+..++++.|++.+.+..
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~ 316 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKS 316 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCCh
Confidence 64433667777777778999999999877889999999873399999998642 22233333344578899887766544
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 377 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~ 377 (380)
..++.+++++++++++++.+++++.|+|+|+++||+.+.+++..|+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 317 RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 5578999999999998888889999999999999999988877798874
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=5.5e-52 Score=388.63 Aligned_cols=337 Identities=29% Similarity=0.471 Sum_probs=288.1
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||+++.+++. ++++++++|+|+++||+||+.++++|++|+..+.+... ...+|.++|||++|+|+++|++++.|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 78999887654 99999999999999999999999999999998776533 23458999999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
|||++.+..+|+.|++|++|+++.|.+... .+|.. ..|+|+||+.++...++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-------------------~~G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-------------------RDGGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-------------------CCCcceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999986543 11211 236999999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~ 249 (380)
+++|+.+++++.|||+++ ..+.+++|++|||+|+|++|++++|+||.+|+++|++++++++|.++++++|++.++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999996 5678899999999999999999999999999955999999999999999999999998865
Q ss_pred CCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCC
Q 016933 250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 328 (380)
Q Consensus 250 ~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 328 (380)
.+ .+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.... ..+......+.+++++.|++...
T Consensus 218 ~~---~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--- 289 (339)
T cd08239 218 DD---VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS--- 289 (339)
T ss_pred ch---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---
Confidence 43 4556666666 8999999999977778899999997 99999997642 22222122344889999987533
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
.++++++++++.++++.+.+++++.|+++++++||+.++++..+|+||++
T Consensus 290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 34689999999999998888899999999999999999887768999875
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-51 Score=383.90 Aligned_cols=336 Identities=21% Similarity=0.330 Sum_probs=276.7
Q ss_pred hhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhc-cCCC--CCCCCccccccccEEEEEeCCCCCC
Q 016933 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSD 85 (380)
Q Consensus 9 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~-g~~~--~~~~p~v~G~e~vG~V~~vG~~v~~ 85 (380)
..+||++++.+++ +++++++.| ++++||||||.++|||++|+.++. |... ...+|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 3578999987776 999999997 689999999999999999999875 3322 2357999999999999999 6789
Q ss_pred CCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCC
Q 016933 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (380)
Q Consensus 86 ~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 165 (380)
|++||||++.+..+|+.|++|+++.+++|++..+. |....+ ....|+|+||++++++.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF---GSAMYF--------------PHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCccee---eccccc--------------CCCCCceeeeEEechHHeEECC
Confidence 99999999999999999999999999999876543 321000 0013699999999999999999
Q ss_pred CCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEe
Q 016933 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi 245 (380)
+++++++++ +..++++||+++. .....+|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++
T Consensus 142 ~~l~~~~aa-~~~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMA-FAEPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHH-hhcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 999987655 4557889999864 45666899999999999999999999999997799999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeeeec
Q 016933 246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG 324 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 324 (380)
++++.+ +.+.. .. .+++|++||++|.+..+..++++++++ |+++.+|....... ++... +.+++++.|+...
T Consensus 220 ~~~~~~--~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~--~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 220 NPQNDD--LDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPPE--FPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred cCCccc--HHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCc--cCHHHHHhCCcEEEEEeec
Confidence 887654 43322 21 236999999999877889999999997 99999997543222 22222 3588999988642
Q ss_pred CCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 325 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
.+++++++++++++++++.++++++|+++|+++||+.+.+++. +|++|.+
T Consensus 293 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 ----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 3579999999999999887889999999999999999988776 7999864
No 16
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=6.1e-51 Score=379.97 Aligned_cols=343 Identities=30% Similarity=0.442 Sum_probs=281.9
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCc-cccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR-IFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~-v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|++++++.++...++++.+.|.+.++||+|||.++|||++|++.+.+..+....|. ++|||++|+|+++| .++.|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 56666666665355777777778999999999999999999999999777666666 99999999999999 77889999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEe-CCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK-INPLA 168 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~-~p~~~ 168 (380)
|||++.+..+|+.|.+|++|.++.|.+.++. |+...... -.|+|+||+.+|.+++++ +||++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~---g~~~~~~~--------------~~G~~aEyv~vp~~~~~~~~pd~~ 142 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFY---GYAGLGGG--------------IDGGFAEYVRVPADFNLAKLPDGI 142 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCcccc---ccccccCC--------------CCCceEEEEEeccccCeecCCCCC
Confidence 9999999999999999999999999966544 33211000 136999999999755555 58888
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNT 247 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~ 247 (380)
+.+++++..++++++++.......+++++++|+|+|++|++++++|+.+|+.+|++++.+++|++++++ .|++.+++.
T Consensus 143 -~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~ 221 (350)
T COG1063 143 -DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP 221 (350)
T ss_pred -ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC
Confidence 677777777999997774445555666699999999999999999999999999999999999999999 667766665
Q ss_pred CCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-cccccccEEEeeeecC
Q 016933 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGN 325 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~ 325 (380)
.+.+ ....+.+.+++ ++|++|||+|.+..+.++++.++++ |+++++|....... .+.. ..+.+++++.|++.
T Consensus 222 ~~~~--~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~-- 295 (350)
T COG1063 222 SEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLR-- 295 (350)
T ss_pred cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccC--
Confidence 5543 67778888888 9999999999988999999999997 99999999865443 2222 23559999999842
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEec
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISM 378 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~--~Kvvi~~ 378 (380)
.....+++.+++++.+|++++.+++++.++++++++|++.+.++.. .|+++.+
T Consensus 296 ~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 296 PSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 1234579999999999999999999999999999999999987654 5998864
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=7.6e-51 Score=385.70 Aligned_cols=346 Identities=22% Similarity=0.305 Sum_probs=273.2
Q ss_pred hhhhhhhccCCCCeEEEEeecCCCC-------CCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCC
Q 016933 10 TCKAAVAWEAGKPLIIQDVEVAPPQ-------AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82 (380)
Q Consensus 10 ~~~a~~~~~~~~~~~~~~~~~p~~~-------~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~ 82 (380)
-|||+++..+++ +++++++.|+|+ +|||||||+++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 389999988776 999999999874 68999999999999999999887543 356899999999999999999
Q ss_pred CCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCC---CCcccccCCCcccccCCCccccccCCcceeeEEEEecc
Q 016933 83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP---VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG 159 (380)
Q Consensus 83 v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~ 159 (380)
|++|++||||++.+..+|+.|.+|++|++++|.+..... .+|+... | .-.|+|+||+.+|..
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~---------~------~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM---------G------GWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc---------C------CCCCceEEEEEechh
Confidence 999999999999999999999999999999999743210 0121100 0 013699999999964
Q ss_pred --ceEeCCCCCCc----cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHH
Q 016933 160 --CVAKINPLAPL----DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 233 (380)
Q Consensus 160 --~~~~~p~~~~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~ 233 (380)
.++++|++++. +.++.+.++++++|+++ ...++++|++|||.|+|++|++++|+|+.+|++.|++++++++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998753 35677788899999985 467899999999998999999999999999996677777888999
Q ss_pred HHHHhcCCceEecCCCCCccHHHHHHHHhCC-CccEEEEcccCh--------------hhHHHHHHHhhcCCcEEEEEcC
Q 016933 234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI--------------DNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 234 ~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
++++++|++.++..++.+ +.+.+.+++++ ++|++||++|.+ ..+.++++.++++ |+++++|.
T Consensus 224 ~~a~~~Ga~~v~~~~~~~--~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~ 300 (393)
T TIGR02819 224 AQARSFGCETVDLSKDAT--LPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL 300 (393)
T ss_pred HHHHHcCCeEEecCCccc--HHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence 999999997543323333 66778777776 899999999985 3799999999997 99999998
Q ss_pred CCCCceeec-----------ccc-ccccccEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCcee-eeeccccHHHHHHH
Q 016933 299 PSKDAVFMT-----------KPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFEY 365 (380)
Q Consensus 299 ~~~~~~~~~-----------~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~a~~~ 365 (380)
......... ... .+.+++++.+.. ....+.+.++++++.++++++.++++ +.|+|+|+++||+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~ 377 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE 377 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence 631111111 111 112455555532 11123347899999999998877777 78999999999999
Q ss_pred HHcCCceeEEEecC
Q 016933 366 MVKGEGLRCIISME 379 (380)
Q Consensus 366 l~~~~~~Kvvi~~~ 379 (380)
+.++...|++|.+.
T Consensus 378 ~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 378 FDAGAAKKFVIDPH 391 (393)
T ss_pred HhhCCceEEEEeCC
Confidence 98887789999864
No 18
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=7.4e-51 Score=374.42 Aligned_cols=315 Identities=28% Similarity=0.391 Sum_probs=264.1
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccC-CCCCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~-~~~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++.+.+.| +++++++.|.|++|||||||.++|||+.|...++|. .+...+|+++|.|++|+|+++|++|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 688888887776 888999999999999999999999999999999986 33456899999999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||||+... .. + ..|+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~-~~------------------------~---------------------~~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-GV------------------------G---------------------RDGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-CC------------------------C---------------------CCCcceeEEEecHHHceeCCCC
Confidence 999999652 00 0 1369999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
+++++||++++++.|||++|.+..++++|++|||+|+ |++|.+++|+||++|+ .++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999988899999999999986 9999999999999998 6666667778888999999999999
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccc-cccEEEeeeec
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG 324 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 324 (380)
|.+.+ |.+.+++++++ ++|+|||++|+ +.+..++++++++ |+++.+|...+.....++...+. +.++..+....
T Consensus 194 y~~~~--~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 194 YREED--FVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred CCccc--HHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence 98887 99999999998 89999999999 7888999999997 99999999874222223333233 66777776654
Q ss_pred CC---CCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcC-Cc-eeEEEec
Q 016933 325 NY---KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG-EG-LRCIISM 378 (380)
Q Consensus 325 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~-~~-~Kvvi~~ 378 (380)
.. ...+.+.++++++++|++++. +.+.||+++..++....... +. +|+|+++
T Consensus 270 ~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 270 SRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 33 112456778899999977655 77899999955555544333 44 7999874
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=6.7e-50 Score=376.36 Aligned_cols=342 Identities=22% Similarity=0.337 Sum_probs=275.0
Q ss_pred chhhhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCC
Q 016933 6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD 85 (380)
Q Consensus 6 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~ 85 (380)
.-||+++++.+.+.++.+++.+++.|+|+++||+|||.++|||++|+.++.|..+...+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 35666777777776666999999999999999999999999999999998876544567999999999999999999999
Q ss_pred CCCCCEEEecCc-cCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeC
Q 016933 86 LEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 164 (380)
Q Consensus 86 ~~~GdrV~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~ 164 (380)
|++||||++.+. .+|+.|.+|++|++++|++..+. +.. .+ ..| ....|+|+||+.++.+.++++
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---~~~--~~-----~~g-----~~~~G~~aey~~v~~~~~~~l 152 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFT---YNS--IG-----HDG-----TKNYGGYSDMIVVDQHFVLRF 152 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCcccc---ccc--cc-----cCC-----CcCCCccceEEEEchHHeeeC
Confidence 999999986543 58999999999999999875432 000 00 000 001369999999999999999
Q ss_pred CCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCce
Q 016933 165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTD 243 (380)
Q Consensus 165 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~-~~~~~~lG~~~ 243 (380)
|+++++++++++++.+.|+|+++.+...+++|++|||.|+|++|++++|+||.+|+ +|++++.++++ .+.++++|+++
T Consensus 153 P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~ 231 (360)
T PLN02586 153 PDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADS 231 (360)
T ss_pred CCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcE
Confidence 99999999999999999999987666667899999999999999999999999999 67777666554 56778999999
Q ss_pred EecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeee
Q 016933 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF 322 (380)
Q Consensus 244 vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 322 (380)
++++.+. +.+++.++ ++|++||++|.+..+..++++++++ |+++.+|..... ..++... +.+++.+.|+.
T Consensus 232 vi~~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~ 302 (360)
T PLN02586 232 FLVSTDP-----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKP--LELPIFPLVLGRKLVGGSD 302 (360)
T ss_pred EEcCCCH-----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCC--CccCHHHHHhCCeEEEEcC
Confidence 9876542 23444443 6999999999877889999999997 999999975432 2222222 33677777776
Q ss_pred ecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 323 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
.+. .+++++++++++++++++. + +.|+|+|+++||+.+.+++. +|+|+++
T Consensus 303 ~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 303 IGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred cCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 432 2468999999999988753 3 68999999999999999886 6999976
No 20
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=6e-49 Score=369.16 Aligned_cols=339 Identities=23% Similarity=0.357 Sum_probs=280.3
Q ss_pred hhhhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||+++.+++. +++++++.|.| +++||+|||.++++|++|+..+.... ...+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 78999988775 99999999997 58999999999999999987532211 12368899999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
|||++.+..+|+.|++|++|.+++|.+.... |.. ..|+|+||+.++.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDFI---GSR-------------------RDGGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCccee---ccC-------------------CCCccceeEEeehHHeEECcCCCC
Confidence 9999999999999999999999999764332 211 136999999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~ 249 (380)
+++++.+. +++++|++ .+...+++|++|||+|+|.+|++++|+|+.+|++.|++++++++++++++++|+++++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99988774 45667877 46678899999999999999999999999999966889999999999999999999998765
Q ss_pred CCccHHHHHHHHhCC-Ccc-EEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc--cccccccEEEeeeecC
Q 016933 250 HDRPIQEVIAEMTNG-GVD-RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP--INVLNERTLKGTFFGN 325 (380)
Q Consensus 250 ~~~~~~~~~~~~~~~-~~d-~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~--~~~~~~~~i~g~~~~~ 325 (380)
.+ .+.+.+++.+ ++| ++|||+|....+..++++++++ |+++++|.......+.... ..+.+++++.|++.+.
T Consensus 215 ~~---~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 290 (347)
T PRK10309 215 MS---APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNY 290 (347)
T ss_pred cC---HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccc
Confidence 43 3445666655 788 9999999977899999999997 9999999765322222111 1234889999987643
Q ss_pred CC--CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 016933 326 YK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 379 (380)
Q Consensus 326 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~ 379 (380)
.. .++++++++++++++++.+++++++.|+|+|+++|++.+.+++. +|+|+++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 22 23578899999999999888889999999999999999988876 69999863
No 21
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3e-48 Score=367.09 Aligned_cols=369 Identities=48% Similarity=0.854 Sum_probs=299.1
Q ss_pred hhhhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCC
Q 016933 7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 86 (380)
Q Consensus 7 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~ 86 (380)
...+|||+++...+++++++++|.|+|.++||+||++++++|++|+..+.|... ..+|.++|||++|+|+++|++++.|
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence 345699999988888899999999999999999999999999999999887652 3568899999999999999999999
Q ss_pred CCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCC
Q 016933 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (380)
Q Consensus 87 ~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 166 (380)
++||+|++.+..+|+.|.+|++++++.|+........|.. .++..++..+|....++.+.|+|+||+.++.+.++++|+
T Consensus 83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence 9999999999999999999999999999865432111211 112222222232222233357999999999999999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
++++++++.+++++.+||+++...+.+++|++|||+|+|.+|++++++|+.+|+.+|+++++++++++.++++|++++++
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~ 241 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECIN 241 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence 99999999999999999998778889999999999988999999999999999867999999999999999999999998
Q ss_pred CCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHh-hcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecC
Q 016933 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 325 (380)
..+.+.++.+.+.+++++++|+++|++|++..+..++..+ .++ |+++.+|.......+.+....+.++.++.++..+.
T Consensus 242 ~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 320 (373)
T cd08299 242 PQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGG 320 (373)
T ss_pred ccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecC
Confidence 7654333666677766668999999999767777767665 565 99999997643323444433344677888887765
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
+...+++.++++++.++.+.+.+++++.|+++++.+|++.+.+++..|+++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 321 WKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred CccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 54445677888888888777777788999999999999999887777888763
No 22
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.3e-48 Score=365.22 Aligned_cols=333 Identities=24% Similarity=0.428 Sum_probs=279.7
Q ss_pred hhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccC-CCCCCCCccccccccEEEEEeCCCCCCCCCCCEE
Q 016933 14 AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 92 (380)
Q Consensus 14 ~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~-~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV 92 (380)
+++.+++++++++++|.|.|+++||+|||.++++|++|+..+.+. .....+|.++|||++|+|+++|++++.+ +||||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 345677777999999999999999999999999999999886433 2234678999999999999999999887 99999
Q ss_pred EecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCC------
Q 016933 93 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP------ 166 (380)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~------ 166 (380)
++.+..+|++|.+|++|++++|.+.... |.. ..|+|+||+.++.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKMP---GND-------------------MQGGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCcc---CcC-------------------CCCcccceEEechHHeEECCccccccc
Confidence 9999999999999999999999764432 211 136999999999999999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
++++++++.+++++.++|+++. ...+++|++|+|+|+|.+|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999999999999999864 5788999999999999999999999999999 8999999999999999999999998
Q ss_pred CCCCC-ccHHHHHHHHhCC-Ccc----EEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEE
Q 016933 247 TSEHD-RPIQEVIAEMTNG-GVD----RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLK 319 (380)
Q Consensus 247 ~~~~~-~~~~~~~~~~~~~-~~d----~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~ 319 (380)
+.+.+ .++.+.+++++++ ++| ++|||+|+...+..++++++++ |+++++|.......+. ... +.+++++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~--~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYR--LSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcccC--HHHHhhcccEEE
Confidence 76643 2467778888776 776 8999999977888999999997 9999999865332222 222 23677888
Q ss_pred eeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 320 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 320 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
|++... .+++.+++++++++++++.++++ .|+|+++++||+.+.+++. +|+++++
T Consensus 294 g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 294 GNWGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EEecCC---HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 876422 34689999999999998777665 6999999999999998886 6988753
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.2e-48 Score=366.32 Aligned_cols=334 Identities=27% Similarity=0.364 Sum_probs=264.1
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC---CCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~---~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++...+.+++++++|.|+|+++||||||+++|||++|+..+.|..+. ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 688888754434999999999999999999999999999999999886432 246889999999999999999 9999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||||+..+..+|+.|.+|++|++++|....... .|.. ...|+|+||+.++.+.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~-~g~~------------------~~~G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTE-RGIK------------------GLHGFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceec-cCcC------------------CCCccceeEEEeccccEEECCCC
Confidence 9999999999999999999999999998654320 0110 01369999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhh------hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcC---ChhHHHHHHh
Q 016933 168 APLDKVCILSCGVSTGLGATL------NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKK 238 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~------~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~---~~~~~~~~~~ 238 (380)
++ + ++.+..++++++.++. ....+++|++|||+|+|++|++++|+||.+|+ +|+++++ +++|++++++
T Consensus 141 ~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 3 3444445555554432 12336789999999999999999999999999 8988887 6889999999
Q ss_pred cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-----ccccc
Q 016933 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-----PINVL 313 (380)
Q Consensus 239 lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-----~~~~~ 313 (380)
+|++. +++.+.+ +.+ . . ..+++|+|||++|++..+..++++++++ |+++++|...+...+.+. ...+.
T Consensus 218 ~Ga~~-v~~~~~~--~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 218 LGATY-VNSSKTP--VAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred cCCEE-ecCCccc--hhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 99987 4554433 333 2 1 2348999999999877889999999997 999999987642333333 12234
Q ss_pred cccEEEeeeecCCCCCCChHHHHHHHHcCCC----CCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 314 NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL----ELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 314 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
+++++.|+..+ ..+++.++++++.++.+ .++++++++|+++|+++||+.+.++. .|++|++
T Consensus 291 k~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 291 GNKALVGSVNA---NKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred cCcEEEEecCC---chhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 89999997643 24578899999988762 35667899999999999999887554 6999875
No 24
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.7e-48 Score=367.89 Aligned_cols=333 Identities=23% Similarity=0.349 Sum_probs=267.5
Q ss_pred hhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCCEEEe
Q 016933 15 VAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP 94 (380)
Q Consensus 15 ~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~ 94 (380)
+..+.++++++.+++.|+|+++||+|||.++|||++|++++.|......+|.++|||++|+|+++|+++++|++||||++
T Consensus 11 ~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~ 90 (375)
T PLN02178 11 AANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGV 90 (375)
T ss_pred EEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEEEE
Confidence 33344445888899999999999999999999999999998876543456899999999999999999999999999986
Q ss_pred cCcc-CCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccch
Q 016933 95 VFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 173 (380)
Q Consensus 95 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~a 173 (380)
.+.. +|+.|.+|++|++++|.+.... +.. . ...| ....|+|+||+.++++.++++|++++++++
T Consensus 91 ~~~~~~cg~C~~C~~g~~~~C~~~~~~---~~~-~------~~~g-----~~~~G~~aey~~v~~~~~~~lP~~ls~~~a 155 (375)
T PLN02178 91 GVIIGSCQSCESCNQDLENYCPKVVFT---YNS-R------SSDG-----TRNQGGYSDVIVVDHRFVLSIPDGLPSDSG 155 (375)
T ss_pred cCccCCCCCChhHhCcchhcCCCcccc---ccc-c------ccCC-----CcCCCccccEEEEchHHeEECCCCCCHHHc
Confidence 6554 6999999999999999875431 000 0 0000 001369999999999999999999999999
Q ss_pred hhcchhhhhhhhhhhhccC-CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChh-HHHHHHhcCCceEecCCCCC
Q 016933 174 CILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHD 251 (380)
Q Consensus 174 a~l~~~~~ta~~~l~~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~-~~~~~~~lG~~~vi~~~~~~ 251 (380)
+++++...|+|+++..... .++|++|+|.|+|++|++++|+||.+|+ +|++++.+++ +.++++++|+++++++.+.
T Consensus 156 a~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~- 233 (375)
T PLN02178 156 APLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTDS- 233 (375)
T ss_pred chhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcCH-
Confidence 9999999999998644332 3689999999999999999999999999 7888876654 5788899999999886542
Q ss_pred ccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCCCCC
Q 016933 252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRT 330 (380)
Q Consensus 252 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~ 330 (380)
+.+++.++ ++|++||++|.+..+..++++++++ |+++.+|..... ..++.. .+.+++++.|+..+. .+
T Consensus 234 ----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~ 302 (375)
T PLN02178 234 ----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKP--LDLPIFPLVLGRKMVGGSQIGG---MK 302 (375)
T ss_pred ----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCC--CccCHHHHHhCCeEEEEeCccC---HH
Confidence 24445443 6999999999876889999999997 999999976432 222222 234888999886543 24
Q ss_pred ChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 331 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
++.++++++++|++++. + +.|+|+++++||+.+.+++. +|+|+++
T Consensus 303 ~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 303 ETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 68999999999988654 4 67999999999999999877 6999876
No 25
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.2e-48 Score=361.82 Aligned_cols=320 Identities=22% Similarity=0.301 Sum_probs=268.0
Q ss_pred hhhccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 14 AVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 14 ~~~~~~~~----~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
+.+.+++. .++++++|.|.|+++||+|||+++|+|++|+..+.|..+....|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 44555553 38899999999999999999999999999999998865444457899999999999999999999999
Q ss_pred CEEEecCc-cCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 90 DHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 90 drV~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
|||++.+. .+|+.|++|++|++++|+...+. |.. ..|+|+||+.++.+.++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRYT---GWD-------------------TDGGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCcccC---Ccc-------------------cCCcceeEEEeccccEEECCCCC
Confidence 99987653 47999999999999999876543 321 13699999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
++++++.+++.+.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999996 46889999999999999999999999999999 799999999999999999999998754
Q ss_pred CCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCC
Q 016933 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYK 327 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~ 327 (380)
+.. .+++|+++++.+....+..++++++++ |+++++|...... ..+... .+.+++++.++...
T Consensus 218 ~~~-----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~--- 281 (329)
T TIGR02822 218 DTP-----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDT-PPLNYQRHLFYERQIRSVTSN--- 281 (329)
T ss_pred ccC-----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccC-CCCCHHHHhhCCcEEEEeecC---
Confidence 321 126899999988878899999999997 9999999753221 122222 23478888887632
Q ss_pred CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 328 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
.++++.+++++++++++. ++++.|+|+|+++||+.+.+++. +|+||
T Consensus 282 ~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 282 TRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred CHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 234678899999999875 36799999999999999998887 69887
No 26
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4.3e-49 Score=330.10 Aligned_cols=317 Identities=26% Similarity=0.286 Sum_probs=277.1
Q ss_pred chhhhhhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCC
Q 016933 6 GLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV 83 (380)
Q Consensus 6 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v 83 (380)
+.|+..|-+++++.|.+ +++++.|.|+|+++|++||..|+|+|..|..+++|.+...+.|++||-|++|+|+++|+++
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 45788899999998887 8899999999999999999999999999999999998888899999999999999999999
Q ss_pred CCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEe
Q 016933 84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK 163 (380)
Q Consensus 84 ~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~ 163 (380)
++|++||||+... ..|.|+|+..+|...+++
T Consensus 84 tdrkvGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEec-------------------------------------------------cchhhheeccccceeecc
Confidence 9999999998551 126999999999999999
Q ss_pred CCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 016933 164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242 (380)
Q Consensus 164 ~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~ 242 (380)
+|+.+++.+||++.+.+.|||..+++...+++|++||++.+ |++|+++.|++++.|+ .+|++.++.+|++.+++.|++
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999999999999888999999999999965 9999999999999999 889998999999999999999
Q ss_pred eEecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEe
Q 016933 243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKG 320 (380)
Q Consensus 243 ~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 320 (380)
+.|+++..| +.+.+++++++ |+|+++|.+|. +++..++.+|++. |.++.+|..++.... ++...+ .+++++..
T Consensus 194 h~I~y~~eD--~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~p-~~l~~ls~k~l~lvr 268 (336)
T KOG1197|consen 194 HPIDYSTED--YVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLIDP-IPLNQLSPKALQLVR 268 (336)
T ss_pred ceeeccchh--HHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCCC-eehhhcChhhhhhcc
Confidence 999999887 99999999988 99999999999 8999999999996 999999987643222 212212 26666544
Q ss_pred eeecCCCC-CCC----hHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 016933 321 TFFGNYKP-RTD----LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 379 (380)
Q Consensus 321 ~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~ 379 (380)
.++..+.+ +.+ ..+++.++.++.+++. +.++|||+++.+|++.+++... +|+++...
T Consensus 269 psl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 269 PSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred HhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 33333332 222 4577888889987776 8999999999999999999887 79998764
No 27
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4e-47 Score=358.77 Aligned_cols=364 Identities=49% Similarity=0.884 Sum_probs=306.9
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
+||+++.+.++++++++.++|.+.++||+|++.++++|++|+....+... ...|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 47888888887899999999999999999999999999999998887543 34678999999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
+|++.+..+|+.|.+|+++.+++|+........|.. .+|...+..+|....++.+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999999999999999999999999887654222322 4455556666655555556689999999999999999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~ 250 (380)
++++.+++++.+||+++...+.+++|++|||+|+|.+|++++++|+.+|+..|+++++++++.+.++++|++++++.++.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999999999999988888899999999999889999999999999999668888889999999999999999987765
Q ss_pred CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhh-cCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCCC
Q 016933 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH-DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 329 (380)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 329 (380)
+..+.+.+++++++++|+++|++|....+..++++++ ++ |+++.+|.........+....+.++.++.|++++.+...
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 317 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSK 317 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchH
Confidence 3247777888776689999999987688899999999 96 999999875422333444333356778888876655566
Q ss_pred CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 016933 330 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 377 (380)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~ 377 (380)
+.+.+++++++++.+++.+++++.|+++++++||+.+.+++..|++++
T Consensus 318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 778999999999988876678899999999999999988777787763
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=6.6e-47 Score=357.24 Aligned_cols=348 Identities=26% Similarity=0.437 Sum_probs=289.5
Q ss_pred hhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCC------
Q 016933 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD------ 85 (380)
Q Consensus 12 ~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~------ 85 (380)
||+++.++++.+++++++.|.|+++||+|||.++++|++|+....|..+...+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 68888888867999999999999999999999999999999988886543567889999999999999999986
Q ss_pred CCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc-ceEeC
Q 016933 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKI 164 (380)
Q Consensus 86 ~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~-~~~~~ 164 (380)
|++||+|++.+..+|+.|.+|+.+.+++|....+. |.....+. ....|+|+||+.++.+ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~~------------~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCDD------------PHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---cccccccC------------CCCCcccceEEEecCCCceEEC
Confidence 99999999999999999999999999999876543 32211100 0013699999999996 79999
Q ss_pred CCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE
Q 016933 165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (380)
Q Consensus 165 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v 244 (380)
|++++.++++.++++++|||+++.+....++|++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++|++.+
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999998989999999998766666799999999999999999999999999788999899999999999999999
Q ss_pred ecCCCCC-ccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEee
Q 016933 245 VNTSEHD-RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGT 321 (380)
Q Consensus 245 i~~~~~~-~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 321 (380)
+++++.+ ..+.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.........+.... +.+++++.++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV 305 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence 8876543 1234567777776 8999999999867888999999997 999999976432233333322 3478888887
Q ss_pred eecCCCCCCChHHHHHHHHcC--CCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 322 FFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
..+ ..+++.++++++.++ .+.+.+++++.|+++++++||+.+++++.+|+||++
T Consensus 306 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 306 HNY---DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred ccC---CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 643 234688999999888 556667788999999999999999888778999864
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=8.7e-47 Score=355.10 Aligned_cols=335 Identities=31% Similarity=0.503 Sum_probs=284.1
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCC-C----------CCCCCccccccccEEEEEe
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-Q----------TPLFPRIFGHEAAGVVESV 79 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~-~----------~~~~p~v~G~e~vG~V~~v 79 (380)
|||+++.++++ +++++++.|+|+++||+||+.++++|++|+....+.. . ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 78999988775 9999999999999999999999999999987654321 1 1236889999999999999
Q ss_pred CCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc
Q 016933 80 GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG 159 (380)
Q Consensus 80 G~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~ 159 (380)
|++++.|++||+|++.+..+|++|.+|+++.+++|....+. |+. ..+|+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI---GLG------------------GGGGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCcee---ccC------------------CCCCceeeEEEechH
Confidence 99999999999999999999999999999999999754432 211 013699999999999
Q ss_pred ceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 016933 160 CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 239 (380)
Q Consensus 160 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l 239 (380)
.++++|+++++++++.+ .++.+||.++ ..+++++|++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999988776 5778999996 778899999999999999999999999999997789998999999999999
Q ss_pred CCceEecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccE
Q 016933 240 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERT 317 (380)
Q Consensus 240 G~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~ 317 (380)
|++.++++++.+ +.+.+++.+++ ++|+++|++|....+..++++++++ |+++.+|..... ..+... .+.++++
T Consensus 217 ga~~~i~~~~~~--~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~ 291 (351)
T cd08233 217 GATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKT 291 (351)
T ss_pred CCCEEECCCccC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcE
Confidence 999999887765 88888888776 7999999999767889999999997 999999986522 222322 2348889
Q ss_pred EEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccH-HHHHHHHHcCCc--eeEEEe
Q 016933 318 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI-NKAFEYMVKGEG--LRCIIS 377 (380)
Q Consensus 318 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~a~~~l~~~~~--~Kvvi~ 377 (380)
+.++..+ ..+++++++++++++++++.+++++.|+++|+ ++|++.+.+++. +|+||.
T Consensus 292 i~g~~~~---~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 292 LTGSICY---TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEecc---CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9887643 24679999999999999877778899999996 799999988875 699873
No 30
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=4.7e-47 Score=357.00 Aligned_cols=338 Identities=22% Similarity=0.355 Sum_probs=275.6
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
++|++++++++++++++++.|+|+++||+|||.++++|++|+..+.|......+|.++|||++|+|+++|+++++|++||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd 89 (357)
T PLN02514 10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGD 89 (357)
T ss_pred EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCCC
Confidence 89999999999999999999999999999999999999999999887654445789999999999999999999999999
Q ss_pred EEEecCc-cCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 91 HVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 91 rV~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
+|++.+. .+|++|.+|+++++++|.+..+. +. ++ + ..| ....|+|+||+.++...++++|++++
T Consensus 90 ~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~----~~--~~---~-~~g-----~~~~G~~aey~~v~~~~~~~iP~~~~ 154 (357)
T PLN02514 90 IVGVGVIVGCCGECSPCKSDLEQYCNKRIWS----YN--DV---Y-TDG-----KPTQGGFASAMVVDQKFVVKIPEGMA 154 (357)
T ss_pred EEEEcCccccCCCChhHhCCCcccCCCcccc----cc--cc---c-cCC-----ccCCCccccEEEEchHHeEECCCCCC
Confidence 9986553 47999999999999999875331 00 00 0 000 01136999999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCceEecCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTS 248 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~-~~~~lG~~~vi~~~ 248 (380)
+++++++++.+.|||+++......++|++++|+|+|++|++++|+||.+|+ +++++++++++.+ .++++|++.++++.
T Consensus 155 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~ 233 (357)
T PLN02514 155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSS 233 (357)
T ss_pred HHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCC
Confidence 999999999999999997666667899999999989999999999999999 7777777776654 45679998887654
Q ss_pred CCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCC
Q 016933 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYK 327 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~ 327 (380)
+. +.+.+.+. ++|++||++|....+..++++++++ |+++.+|..... ..+... .+.+++++.|++.+.
T Consensus 234 ~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~-- 302 (357)
T PLN02514 234 DA-----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTP--LQFVTPMLMLGRKVITGSFIGS-- 302 (357)
T ss_pred Ch-----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCC--CcccHHHHhhCCcEEEEEecCC--
Confidence 32 23444433 6999999999867889999999997 999999986432 222222 234888999987543
Q ss_pred CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 016933 328 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 379 (380)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~ 379 (380)
..++.++++++++++++ +++ +.|+|+|+.+||+.+.+++. +|+++.++
T Consensus 303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 24689999999999764 344 68999999999999998887 69999875
No 31
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=3e-46 Score=352.85 Aligned_cols=362 Identities=36% Similarity=0.636 Sum_probs=290.6
Q ss_pred hhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCC
Q 016933 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 9 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
|+|||+++.++++++++++.++|+++++||+||+.++++|++|+....+..+ ..+|.++|||++|+|+++|+++..|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 5799999988777799999999999999999999999999999999887654 346889999999999999999999999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCcc--ccccCCcceeeEEEEeccceEeCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPV--NHFLGTSTFSEYTVVHSGCVAKINP 166 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~--~~~~~~G~~a~~~~v~~~~~~~~p~ 166 (380)
||+|++.+. +|+.|.+|+.+.+++|.........|.. .+|...+...+... ......|+|++|+.++.+.++++|+
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 999998764 8999999999999999864422111110 00000000000000 0012347999999999999999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
++++++++.+++++.+|+.++...+.++++++|||+|+|.+|++++|+|+++|++++++++++++|.++++++|++.+++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99999999999999999998878888999999999988999999999999999977999999999999999999999998
Q ss_pred CCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeeeecC
Q 016933 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN 325 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 325 (380)
+++.+ +.+.+.+.+++++|+++|++|+...+..++++++++ |+++.+|..........+...+ .+++++.++....
T Consensus 238 ~~~~~--~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 238 PKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred CCCcC--HHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 87654 777787777448999999999777889999999997 9999999763222233333334 4788888776543
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 377 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~ 377 (380)
....+.+.+++++++++++.+.++ .+.|+++++++|++.+++++..|++|+
T Consensus 315 ~~~~~~~~~~~~~l~~g~l~~~~~-~~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKFPFDKL-VTFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred cChHHHHHHHHHHHHcCCCChHHh-eEEecHHHHHHHHHHHHCCCceEEEEC
Confidence 333456788999999998854333 357999999999999998877898874
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.1e-44 Score=338.85 Aligned_cols=342 Identities=25% Similarity=0.338 Sum_probs=282.5
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++. +++++.+.|.+.++||+||+.++++|++|+..+.+.......|.++|||++|+|+++|+++++|++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 78999988875 89999999999999999999999999999988877655456689999999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc--ceEeCCCCC
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA 168 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~~ 168 (380)
+|++.+..+|+.|..|..|.++.|.+... |.... ....|+|+||+.++.. .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~----~~~~~---------------~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG----GWKFS---------------NFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC----Ccccc---------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence 99998888999999999999999975421 10000 0113699999999974 899999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
++++++.+++.+.|||++ ...+.+++|++|||+|+|.+|++++|+|+.+|+..++++++++++.++++++|++++++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 999999999899999998 4778899999999998899999999999999997799999999999999999999999887
Q ss_pred CCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc---ccccEEEeeeec
Q 016933 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV---LNERTLKGTFFG 324 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~ 324 (380)
+.+ +.+.+..+..+ ++|+++|++|+...+..++++++++ |+++.+|.........+....+ .+..++.+...
T Consensus 220 ~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 295 (351)
T cd08285 220 NGD--VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC- 295 (351)
T ss_pred CCC--HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeec-
Confidence 655 77777777665 8999999999877889999999997 9999999765332233322111 24555655432
Q ss_pred CCCCCCChHHHHHHHHcCCCCCCCc-eeeeeccccHHHHHHHHHcCCc--eeEEEec
Q 016933 325 NYKPRTDLPSVVDMYMNKQLELEKF-ITHRIPFSEINKAFEYMVKGEG--LRCIISM 378 (380)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~a~~~l~~~~~--~Kvvi~~ 378 (380)
....+.+++++++++++++.+..+ +.+.++++++++||+.+++++. .|++|++
T Consensus 296 -~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 296 -PGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred -CCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 122457899999999999887433 4456899999999999998864 6999875
No 33
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.7e-44 Score=337.98 Aligned_cols=335 Identities=23% Similarity=0.369 Sum_probs=276.6
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++. +++++++.|+|+++||+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68888888775 99999999999999999999999999999998887655446789999999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
+|++.+..+|+.|.+|+++++++|....+. ++ ..+|+|+||+.++...++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL---GV-------------------HRDGGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCceE---EE-------------------ccCCcceeeEEechHHeEECcCCCCH
Confidence 999999999999999999999999754432 11 11368999999999999999999998
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHHHhcCCceEecCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~-~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~ 249 (380)
+.++ +...+.++|. +....++++|++|+|+|+|.+|++++|+|+. +|+..+++++++++|.++++++|++.++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 5567788885 4677889999999999999999999999996 59977888999999999999999999998766
Q ss_pred CCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeeeecCCCC
Q 016933 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP 328 (380)
Q Consensus 250 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~ 328 (380)
.+ +.+.+... +.++|++||++|.+..+..++++++++ |+++.+|.......+ .... ..+++++.++.. .
T Consensus 216 ~~--~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~----~ 285 (339)
T PRK10083 216 EP--LGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPSEI--VQQGITGKELSIFSSRL----N 285 (339)
T ss_pred cc--HHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcee--cHHHHhhcceEEEEEec----C
Confidence 44 55555331 115679999999767899999999997 999999976432211 1111 236677776543 2
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEEecCC
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIISMED 380 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~Kvvi~~~~ 380 (380)
.+.+++++++++++++.+.+++++.|+++++++|++.++++. . +|+++++.+
T Consensus 286 ~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 286 ANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 356899999999998877655789999999999999998653 3 699998764
No 34
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.9e-45 Score=343.93 Aligned_cols=322 Identities=17% Similarity=0.194 Sum_probs=250.3
Q ss_pred hhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC----CCCCccccccccEEEEEeCCCCCC
Q 016933 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAGVVESVGEGVSD 85 (380)
Q Consensus 10 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~----~~~p~v~G~e~vG~V~~vG~~v~~ 85 (380)
..+|++++.+++ +++++++.|+ +++||||||+++|||++|++++.|.+.. ..+|.++|||++|+|+++|.+ +
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 457888888886 9999999995 9999999999999999999999886532 357999999999999998864 7
Q ss_pred CCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCC
Q 016933 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (380)
Q Consensus 86 ~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 165 (380)
|++||||++.+...|+ |.+|. ..++|.+..+. |.. ..|+|+||+++|.+.++++|
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~vP 132 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEII--PENYLPSSRFR---SSG-------------------YDGFMQDYVFLPPDRLVKLP 132 (341)
T ss_pred cCCCCEEEECCCCCch-hcccc--hhccCCCccee---Eec-------------------CCCceEEEEEEchHHeEECC
Confidence 9999999998888887 55663 56778765432 211 12689999999999999999
Q ss_pred CCCCccchhhcchhhhhhhhhhhh--ccCCCCCCeEEEEcCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHHHhcCCc
Q 016933 166 PLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVT 242 (380)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~vlI~G~g~~G~~ai~la~~-~g~~~vi~~~~~~~~~~~~~~lG~~ 242 (380)
+++++++|+.+ .+++++|+++.. ...+++|++|||+|+|++|++++|+|+. +|+.+|++++++++|++++++++++
T Consensus 133 ~~l~~~~aa~~-~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFT-ELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhh-chHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 99999887744 488899988654 3457899999999999999999999986 6655899999999999999887765
Q ss_pred eEecCCCCCccHHHHHHHHhCCCccEEEEcccC---hhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEE
Q 016933 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTL 318 (380)
Q Consensus 243 ~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i 318 (380)
..++ + +.+ ..++|+|||++|+ +..+..++++++++ |+++++|..... ..+... .+.+++++
T Consensus 212 ~~~~--~----~~~------~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~i 276 (341)
T cd08237 212 YLID--D----IPE------DLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYP--VPINTRMVLEKGLTL 276 (341)
T ss_pred eehh--h----hhh------ccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCC--cccCHHHHhhCceEE
Confidence 4331 1 111 1169999999994 46789999999997 999999975422 222222 24488999
Q ss_pred EeeeecCCCCCCChHHHHHHHHcC---CCCCCCceeeeeccccHHHHHHH---HHcCCceeEEEecC
Q 016933 319 KGTFFGNYKPRTDLPSVVDMYMNK---QLELEKFITHRIPFSEINKAFEY---MVKGEGLRCIISME 379 (380)
Q Consensus 319 ~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~a~~~---l~~~~~~Kvvi~~~ 379 (380)
.|+..+ ..++++++++++.++ +.++++++++.|+++++.++.+. +.++..+|+||+++
T Consensus 277 ~g~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 277 VGSSRS---TREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred EEeccc---CHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 987642 234689999999998 33577788999998655544444 44444479999875
No 35
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=5.5e-44 Score=337.37 Aligned_cols=360 Identities=41% Similarity=0.728 Sum_probs=291.7
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++.+++++++++|.++++||+|++.++++|+.|+.++.|..+ ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 78999998888899999999999999999999999999999998877554 35678899999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
+|++.+..+|++|.+|++++.++|...... .+|.. +++..++-..|...+...+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccc-ccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 999999999999999999999999754211 00100 1111111111222222233579999999999999999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~ 250 (380)
++++.+++.+.+||.++.....++++++|||+|+|.+|++++++|+.+|+.+|+++++++++.++++++|++++++.+..
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 237 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED 237 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCc
Confidence 99999999999999998888899999999999889999999999999999559999999999999999999999887765
Q ss_pred CccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccc-cccEEEeeeecCCCC
Q 016933 251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP 328 (380)
Q Consensus 251 ~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~ 328 (380)
+ +...+.++..+ ++|+++|++++...+..++++++++ |+++.+|.........+....+. ++..+.++.+.....
T Consensus 238 ~--~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (363)
T cd08279 238 D--AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP 314 (363)
T ss_pred c--HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence 4 77778777755 8999999999767889999999997 99999987542223333333333 566777765543334
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 376 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi 376 (380)
.+.+++++++++++.+.+.+.+.+.|+++++.+|++.+.+++..|.|+
T Consensus 315 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 315 RRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 567889999999998876555778999999999999999888766554
No 36
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=3.9e-44 Score=334.61 Aligned_cols=330 Identities=25% Similarity=0.458 Sum_probs=278.9
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++.++++++.+.|.++++||+||+.++++|++|+..+.|..+....|.++|||++|+|+++|+++++|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 78999988866799999999999999999999999999999998887654445688999999999999999999999999
Q ss_pred EEEecC-ccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 91 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 91 rV~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
+|++.+ ...|+.|.+|+.|+++.|.+.... |+. ..|+|++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~---~~~-------------------~~g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT---GVT-------------------RDGGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCcc---Ccc-------------------cCCcceeEEEEchhheEeCCCCCC
Confidence 998743 578999999999999999876653 221 135899999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~ 249 (380)
+++++.+++.+.+||+++. ...++++++|||+|+|.+|++++++|+++|+ +|+++++++++.+.++++|+++++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 9999999999999999864 4589999999999999999999999999999 8999999999999999999999998876
Q ss_pred CCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCCC
Q 016933 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP 328 (380)
Q Consensus 250 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~ 328 (380)
.+ +.+.+++. +++|+++|++|....+..++++++++ |+++.+|.... ...++.. .+.+++++.++..+.
T Consensus 217 ~~--~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~--- 286 (333)
T cd08296 217 ED--VAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT--- 286 (333)
T ss_pred cc--HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---
Confidence 54 66666665 36999999998668899999999997 99999998652 2233322 235889999876332
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
..++.++++++.+++++. ++ +.|+++++.+||+.+.+++. +|+|++
T Consensus 287 ~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 246788888888886543 34 68999999999999998887 699874
No 37
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.9e-44 Score=341.76 Aligned_cols=331 Identities=18% Similarity=0.214 Sum_probs=261.3
Q ss_pred hhhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhh-ccCCCC------CCCCccccccccEEEEEeCC
Q 016933 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQT------PLFPRIFGHEAAGVVESVGE 81 (380)
Q Consensus 9 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~-~g~~~~------~~~p~v~G~e~vG~V~~vG~ 81 (380)
|.|||+++..++. ++++++|.|+|+++||+|||.++|||++|+..+ .|.... ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5689999988875 999999999999999999999999999999876 443211 24688999999999999999
Q ss_pred CCC-CCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc-
Q 016933 82 GVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG- 159 (380)
Q Consensus 82 ~v~-~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~- 159 (380)
+++ .|++||||++.+...|+.|..|. + + |+. ..|+|+||+.++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~---~----------g~~-------------------~~G~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G---Y----------SYT-------------------YPGGLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C---c----------ccc-------------------CCCcceEEEEecHHh
Confidence 998 59999999999888899888772 1 0 110 12599999999987
Q ss_pred ---ceEeCCCCCCccchhhc-chhh-hhhhhhh--------hhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcC--CcEE
Q 016933 160 ---CVAKINPLAPLDKVCIL-SCGV-STGLGAT--------LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAG--ASRI 223 (380)
Q Consensus 160 ---~~~~~p~~~~~~~aa~l-~~~~-~ta~~~l--------~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g--~~~v 223 (380)
.++++|+++++++++.+ +... .+++.++ .+.+++++|++|+|+|+ |++|++++|+|+.+| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 58999999999988754 2111 2233332 24578899999999985 999999999999975 4579
Q ss_pred EEEcCChhHHHHHHhc--------CCc-eEecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEE
Q 016933 224 IGVDRSSKRFEEAKKF--------GVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVA 293 (380)
Q Consensus 224 i~~~~~~~~~~~~~~l--------G~~-~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~ 293 (380)
++++++++|++.++++ |++ .++++++. .++.+.+++++++ ++|++||++|.+..+..++++++++ |++
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~ 284 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPATI-DDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL 284 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCcc-ccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence 9999999999999997 776 46776542 1277788888877 8999999999878999999999997 887
Q ss_pred EEEcCC-CCCceeeccccc-cccccEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc
Q 016933 294 VLVGVP-SKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 371 (380)
Q Consensus 294 v~~g~~-~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~ 371 (380)
+.++.. .......++... +.+++++.|+..+ ..+++++++++++++++++.+++++.|+|+++++|++.+..+..
T Consensus 285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~ 361 (410)
T cd08238 285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG---NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPG 361 (410)
T ss_pred EEEEccCCCCccccccHHHhhhcCcEEEEeCCC---CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCC
Confidence 766432 211112233222 3488999997643 23568999999999999988889999999999999999994434
Q ss_pred eeEEEec
Q 016933 372 LRCIISM 378 (380)
Q Consensus 372 ~Kvvi~~ 378 (380)
+|+||.+
T Consensus 362 gKvvl~~ 368 (410)
T cd08238 362 GKKLIYT 368 (410)
T ss_pred ceEEEEC
Confidence 7999976
No 38
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2.2e-43 Score=331.83 Aligned_cols=336 Identities=25% Similarity=0.398 Sum_probs=278.4
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC---------CCCCccccccccEEEEEeCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---------PLFPRIFGHEAAGVVESVGE 81 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~---------~~~p~v~G~e~vG~V~~vG~ 81 (380)
|||++++++++ +++++++.|++.++||+||+.++++|+.|+....|.... ...|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999988775 999999999999999999999999999999988774311 14677899999999999999
Q ss_pred CCC--CCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc
Q 016933 82 GVS--DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG 159 (380)
Q Consensus 82 ~v~--~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~ 159 (380)
+++ .|++||+|+..+..+|+.|.+|+++.+++|..... +|+.. ...|+|++|+.++.+
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeecc-----------------CCCCcceeeEEcccc
Confidence 998 89999999999999999999999999999974322 23210 013699999999988
Q ss_pred -ceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 016933 160 -CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 160 -~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~ 238 (380)
.++++|+++++++++.+ .+++++|.++ +.+.+++|++|||.|+|.+|++++++|+++|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999988 7889999986 77889999999997779999999999999998678889999999999999
Q ss_pred cCCceEecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccE
Q 016933 239 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERT 317 (380)
Q Consensus 239 lG~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 317 (380)
+|++.++++++.+ +.+.+.+++++ ++|++||++|....+..++++++++ |+++.+|.......+........++++
T Consensus 218 ~g~~~v~~~~~~~--~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 218 FGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELD 294 (350)
T ss_pred cCCcEEecCCCcC--HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccE
Confidence 9999888876554 77778887776 8999999999756788999999997 999999865422222221111236677
Q ss_pred EEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 318 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 318 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
+.++.... ..+.+++++++++.+.+.+++++.|+++++.+|++.+++++. +|+++
T Consensus 295 i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 77765432 358889999999988765556899999999999999998876 58774
No 39
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.6e-43 Score=335.06 Aligned_cols=357 Identities=28% Similarity=0.402 Sum_probs=284.7
Q ss_pred hhhhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||+++.++++ +++++++.|.| ++++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++.|++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999887754 99999999988 49999999999999999999998876555678999999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCC-CcccccCCCcccccCCCccccccCCcceeeEEEEecc--ceEeCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV-RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINP 166 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~ 166 (380)
|+|++.+...||+|.+|+.+.+++|++....++ .|.. |.....+.|...-.....|+|++|+.++.+ .++++|+
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLY---GHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccccccc---ccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 999999989999999999999999997665320 0100 000000000000000113799999999988 8999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
++++++++.+++.+++||+++ ....+++|++|||+|+|.+|++++++|+..|+.+|+++++++++.+++++++...+++
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~ 235 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETIN 235 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEc
Confidence 999999999999999999997 7788999999999988999999999999999856999999999999999984446777
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccCh---------------------hhHHHHHHHhhcCCcEEEEEcCCCCCce
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNI---------------------DNMISAFECVHDGWGVAVLVGVPSKDAV 304 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~---------------------~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 304 (380)
+.+.+ .+.+.+++++++ ++|++||++|+. ..+..++++++++ |+++.+|..... .
T Consensus 236 ~~~~~-~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~ 312 (386)
T cd08283 236 FEEVD-DVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-V 312 (386)
T ss_pred CCcch-HHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-c
Confidence 65532 277778887776 899999999752 3678899999997 999999876432 2
Q ss_pred eeccc-cccccccEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEEec
Q 016933 305 FMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIISM 378 (380)
Q Consensus 305 ~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~Kvvi~~ 378 (380)
..... ..+.+++++.++.. ...+.+.++++++.++++...+++++.|+++++.+|++.+.+++ . +|++|++
T Consensus 313 ~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 313 NKFPIGAAMNKGLTLRMGQT---HVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred CccCHHHHHhCCcEEEeccC---CchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 22222 22447788877642 22356889999999998876656778999999999999998876 3 6999863
No 40
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.4e-43 Score=329.50 Aligned_cols=341 Identities=31% Similarity=0.431 Sum_probs=283.7
Q ss_pred hhhhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||+++.+++. +++.+.+.|.| .++||+||+.++++|++|+....+..+...+|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68888887776 89999999999 89999999999999999999888876656678999999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc--ceEeCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 167 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~ 167 (380)
|+|++.+..+||.|.+|.++.+.+|.........| ....|+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG-------------------NRIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccc-------------------cCCCCeeeEEEEecchhCeEEECCCC
Confidence 99999999999999999999999998754321111 0123699999999987 99999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
+++++++.+++.+.|||+++ ...+++++++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999996 67889999999998889999999999999996578888889999999999999999988
Q ss_pred CCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCC
Q 016933 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 326 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 326 (380)
++.+ +.+.+++.+++ ++|++||++|+...+..++++++++ |+++.+|..............+.+++++.++...
T Consensus 220 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (347)
T cd05278 220 KNGD--IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVP-- 294 (347)
T ss_pred Ccch--HHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccC--
Confidence 7654 77778877765 8999999999866889999999997 9999998654322111112223466777665432
Q ss_pred CCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEec
Q 016933 327 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISM 378 (380)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~--~Kvvi~~ 378 (380)
..+.+.++++++.++.+.+.+.+...++++++++|++.+.+++. .|+++++
T Consensus 295 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 295 -VRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred -chhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 24568899999999988765446788999999999999987765 4888763
No 41
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.2e-43 Score=327.08 Aligned_cols=303 Identities=20% Similarity=0.286 Sum_probs=238.9
Q ss_pred hhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecC-cccchhhccCCCC---CCCCccccccccEEEEEeCCCCCC
Q 016933 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLC-RTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD 85 (380)
Q Consensus 10 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~-~~D~~~~~g~~~~---~~~p~v~G~e~vG~V~~vG~~v~~ 85 (380)
+|||+++.+++. ++++++++|+|+++||||||++++|| ++|+.++.|..+. ..+|.++|||++|+|+++|+++ .
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478898887765 99999999999999999999999996 6999888886543 3579999999999999999998 6
Q ss_pred CCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCC
Q 016933 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (380)
Q Consensus 86 ~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 165 (380)
|++||||++. |..|.+|.. | ..|+|+||+.++.+.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~---------------------~~G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G---------------------LFGGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c---------------------cCCcccceEEcCHHHceeCC
Confidence 9999999863 222332210 0 02599999999999999999
Q ss_pred CCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEe
Q 016933 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi 245 (380)
++++++. +.+. ..+|||+++.+ . ..+++++||+|+|++|++++|+||.+|++.|++++.+++|++.++++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9998754 4444 57899998644 3 34688999999999999999999999996677788888887766543 345
Q ss_pred cCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecC
Q 016933 246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 325 (380)
++.+. .+.++|++|||+|++..+..++++++++ |+++++|.......++... .+.+++++.++..+
T Consensus 192 ~~~~~-----------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~i~~~~~~- 257 (308)
T TIGR01202 192 DPEKD-----------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVP-AFMKEARLRIAAEW- 257 (308)
T ss_pred Chhhc-----------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccch-hhhcceEEEEeccc-
Confidence 43221 1237999999999977889999999997 9999999864322222221 23478888876532
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
..+++++++++++++++++.+++++.|+|+|+++|++.+.++.. +|++|+
T Consensus 258 --~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 258 --QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred --chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 23569999999999999988889999999999999998876544 799874
No 42
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.3e-42 Score=325.42 Aligned_cols=332 Identities=29% Similarity=0.445 Sum_probs=283.0
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC---CCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~---~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++.++++++++.+.++|.+.++||+||+.++++|++|+....|... ...+|.++|+|++|+|+++|+++..|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999988877899999999999999999999999999999998877553 345688999999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|++.+...|+.|.+|+.|..++|.+..+. |.. ..|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP---GIG-------------------TDGGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc---Ccc-------------------CCCcceeeEEecHHHeEECCCC
Confidence 999999999999999999999999999987765 321 1369999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhc-cCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhcCCceEe
Q 016933 168 APLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vi~~~~~~~~~~~~~~lG~~~vi 245 (380)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+| + +|+++.+++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999997665 46888999999999789999999999999 6 888888999999999999999998
Q ss_pred cCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeeee
Q 016933 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF 323 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 323 (380)
++++. +.+.++++.++ ++|+++|++|+......++++++++ |+++.+|.... ....... +.+++++.++..
T Consensus 218 ~~~~~---~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~ 290 (340)
T cd05284 218 NASDD---VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLW 290 (340)
T ss_pred cCCcc---HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEec
Confidence 87653 67778877766 8999999999767889999999997 99999987642 1222222 347888887653
Q ss_pred cCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 324 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
. ..+.+.+++++++++.+.+ ..+.|+++++++|++.+.+++. +|+++.+
T Consensus 291 ~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 291 G---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred c---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 2 3456888999999998764 3467999999999999998877 6888764
No 43
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2e-42 Score=327.30 Aligned_cols=359 Identities=33% Similarity=0.520 Sum_probs=287.3
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCC---CC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD---LE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~---~~ 87 (380)
|||+++..++.++++++.++|.++++||+||+.++++|++|+.+..+..+. .+|.++|||++|+|+.+|+++.. |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 689999888777999999999999999999999999999999988876543 56789999999999999999988 99
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccC-CCCcccccCCCcccccC-CCccccccCCcceeeEEEEeccceEeCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN-PVRGVMLADGQSRFSIN-GEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~g~~~~~~~-g~~~~~~~~~G~~a~~~~v~~~~~~~~p 165 (380)
+||+|+..+..+||.|.+|..+.+++|.+.... +..|.. .+|-..+... +..++ ....|+|++|+.++.+.++++|
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P 157 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTL-YDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLP 157 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccc-cCCcccccccCCCccc-cccCCcceeEEEechhhEEECC
Confidence 999999999999999999999999999965421 100000 0000000000 00000 0123699999999999999999
Q ss_pred CCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEe
Q 016933 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi 245 (380)
+++++.+++.+++.+.|||.++.+...+.++++|||+|+|.+|++++++|+.+|+.+++++++++++.+.++++|++.++
T Consensus 158 ~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~ 237 (367)
T cd08263 158 ESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV 237 (367)
T ss_pred CCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEe
Confidence 99999999999999999999987888889999999998899999999999999995599898999999999999999999
Q ss_pred cCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeeee
Q 016933 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF 323 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 323 (380)
+.++.+ +.+.+++..++ ++|+++|++++......++++++++ |+++.+|.........+....+ .+++++.++..
T Consensus 238 ~~~~~~--~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (367)
T cd08263 238 NAAKED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG 314 (367)
T ss_pred cCCccc--HHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC
Confidence 887655 77778877665 8999999999854888999999997 9999998654322222333333 46777777432
Q ss_pred cCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 324 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
....+.+++++++++++.+.+.+.+++.++++++.++++.+++++. +|+||+
T Consensus 315 --~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 315 --ARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred --CCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1223468889999999988765557889999999999999998876 688874
No 44
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.9e-42 Score=330.39 Aligned_cols=342 Identities=18% Similarity=0.219 Sum_probs=278.1
Q ss_pred chhhhhhhhhhc--cCCC---CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC----------CCCCCccccc
Q 016933 6 GLILTCKAAVAW--EAGK---PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ----------TPLFPRIFGH 70 (380)
Q Consensus 6 ~~~~~~~a~~~~--~~~~---~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~----------~~~~p~v~G~ 70 (380)
..|.+|+|+++. ..+. .+++++++.|.++++||+||+.++++|++|+....+... ....+.++||
T Consensus 8 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~ 87 (393)
T cd08246 8 VVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGS 87 (393)
T ss_pred cCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccccc
Confidence 367889999875 2332 378899999999999999999999999999988766411 0112358899
Q ss_pred cccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcce
Q 016933 71 EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTF 150 (380)
Q Consensus 71 e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~ 150 (380)
|++|+|+++|++++.|++||+|++.+...|+.|.+|..+.+++|....+. |+.. ..|+|
T Consensus 88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~~------------------~~g~~ 146 (393)
T cd08246 88 DASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIW---GYET------------------NYGSF 146 (393)
T ss_pred ceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccc---cccC------------------CCCcc
Confidence 99999999999999999999999999999999999999999999865544 4321 13699
Q ss_pred eeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhc--cCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEc
Q 016933 151 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD 227 (380)
Q Consensus 151 a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~ 227 (380)
++|+.++...++++|+++++++++.+++++.|||+++... ++++++++|+|+|+ |.+|++++++|+.+|+ ++++++
T Consensus 147 a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~ 225 (393)
T cd08246 147 AQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVV 225 (393)
T ss_pred eeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEe
Confidence 9999999999999999999999999999999999997654 67899999999997 9999999999999999 777888
Q ss_pred CChhHHHHHHhcCCceEecCCCCC--------------------ccHHHHHHHHhCC--CccEEEEcccChhhHHHHHHH
Q 016933 228 RSSKRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFEC 285 (380)
Q Consensus 228 ~~~~~~~~~~~lG~~~vi~~~~~~--------------------~~~~~~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~ 285 (380)
+++++.++++++|+++++++++.+ ..+.+.+.+++++ ++|++||++|+ ..+..++++
T Consensus 226 ~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~ 304 (393)
T cd08246 226 SSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFV 304 (393)
T ss_pred CCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHH
Confidence 999999999999999998875431 1256677777776 69999999998 778899999
Q ss_pred hhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHH
Q 016933 286 VHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 364 (380)
Q Consensus 286 l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~ 364 (380)
++++ |+++.+|...... ...... .+.++.++.+++... .+.+.+++++++++.+.+ .+++.|+++++++|++
T Consensus 305 l~~~-G~~v~~g~~~~~~-~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~ 377 (393)
T cd08246 305 CDRG-GMVVICAGTTGYN-HTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQ 377 (393)
T ss_pred hccC-CEEEEEcccCCCC-CCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHH
Confidence 9997 9999998754221 112222 234677777765432 246888999999997753 3678999999999999
Q ss_pred HHHcC-Cc-eeEEEe
Q 016933 365 YMVKG-EG-LRCIIS 377 (380)
Q Consensus 365 ~l~~~-~~-~Kvvi~ 377 (380)
.+.++ +. +|+++.
T Consensus 378 ~~~~~~~~~gkvvv~ 392 (393)
T cd08246 378 LMHRNQHHVGNMAVL 392 (393)
T ss_pred HHHhCccccceEEEe
Confidence 99887 55 688874
No 45
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.5e-42 Score=324.76 Aligned_cols=336 Identities=27% Similarity=0.423 Sum_probs=282.0
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC------------CCCCCccccccccEEEEE
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ------------TPLFPRIFGHEAAGVVES 78 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~------------~~~~p~v~G~e~vG~V~~ 78 (380)
|||+++..++.+++++++++|+++++||+||+.++++|++|+..+.+..+ ..++|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 78998888888899999999999999999999999999999998876432 234568899999999999
Q ss_pred eCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEec
Q 016933 79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 158 (380)
Q Consensus 79 vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~ 158 (380)
+|++++++++||+|++.+...|+.|.+|.++.+++|....+. |. ...|++++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL---GI-------------------FQDGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce---ee-------------------eccCcceeeEEecH
Confidence 999999999999999999999999999999999999764332 11 01368999999999
Q ss_pred cceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 016933 159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 159 ~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~ 238 (380)
+.++++|+++++.+++++.+.+.+||+++.+...++++++|||+|+|.+|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999997766667789999999889999999999999999778889899999999999
Q ss_pred cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEE
Q 016933 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL 318 (380)
Q Consensus 239 lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 318 (380)
+|++.+++.++.+ +.+.+.+..++++|++||++|....+..++++++++ |+++.+|............. ..++.++
T Consensus 219 ~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i 294 (350)
T cd08240 219 AGADVVVNGSDPD--AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTI 294 (350)
T ss_pred hCCcEEecCCCcc--HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEE
Confidence 9998888876544 666777766658999999999767899999999997 99999987653322222222 2377788
Q ss_pred EeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 319 KGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 319 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
.++.... .+.+.+++++++++.+... ..+.|+++++++|++.+.+++. +|++++
T Consensus 295 ~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 295 QGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 7765432 2468889999999977643 5678999999999999988776 698875
No 46
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.5e-42 Score=324.12 Aligned_cols=337 Identities=31% Similarity=0.430 Sum_probs=283.4
Q ss_pred hhhhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||+++.+++. +++++.+.|+| .++||+||++++++|+.|+.++.|..+...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68888888776 99999999986 89999999999999999999988866555568899999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc--ceEeCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 167 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~ 167 (380)
|+|++.+...|++|.+|..++++.|....+. .|+ ...|+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~~g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGN-------------------LIDGTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--ccc-------------------ccCCeeeeEEEcccccCceEECCCC
Confidence 9999999999999999999999999855331 011 113689999999987 89999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
++..+++.+++.+.+||.++...+.+++++++||+|+|.+|++++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999877778889999999999889999999999999994488889899999999999999999988
Q ss_pred CCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeeeecC
Q 016933 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN 325 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 325 (380)
++.+ +.+.+.+++++ ++|++||++|....+..++++++++ |+++.+|..... ..+.... +.+++++.+....
T Consensus 219 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~- 292 (345)
T cd08286 219 AKGD--AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD- 292 (345)
T ss_pred cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc-
Confidence 7654 77777777766 8999999999877888999999997 999999875422 2233332 4478888764321
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC---ceeEEEec
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE---GLRCIISM 378 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~---~~Kvvi~~ 378 (380)
.+.+.+++++++++.+.+.+++++.|++++++++++.+.+.. ..|++|++
T Consensus 293 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 ---TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ---hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 245888999999998877666789999999999999998762 35999864
No 47
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3.9e-42 Score=322.29 Aligned_cols=337 Identities=29% Similarity=0.443 Sum_probs=274.2
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCC---CCCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~---~~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
||++++.++++.+++.+.+.|.|+++||+||++++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899998888779999999999999999999999999999998765521 1234678899999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|++.+.++|+.|.+|+.+++++|.+.... |+ ..+|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV---GV-------------------NRPGAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCccee---ee-------------------cCCCcceeeEEechHHeEECcCC
Confidence 999999999999999999999999999865322 11 12369999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
+++++++.+ ..+.++++++.. ...+|++|+|.|+|.+|++++|+|+.+|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 998888754 455666655432 34689999999889999999999999999668888889999999999999999988
Q ss_pred CCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCC
Q 016933 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 326 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 326 (380)
++.+ +.+.+++++++ ++|++|||+|+...+..++++++++ |+++.+|.......+.. ...+.+++++.++...
T Consensus 216 ~~~~--~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~-- 289 (341)
T PRK05396 216 AKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGR-- 289 (341)
T ss_pred cccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEcc--
Confidence 7655 77888887765 8999999999877889999999997 99999987643222222 2223477777776421
Q ss_pred CCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 016933 327 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 379 (380)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~~ 379 (380)
...+.+..+++++.++ +.+.+.+.+.++++++++|++.+.+++.+|++++++
T Consensus 290 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 290 EMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred CccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 1224566788888888 445455778999999999999998776579999874
No 48
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=3.9e-42 Score=322.80 Aligned_cols=338 Identities=29% Similarity=0.428 Sum_probs=285.8
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++.++++++.+.|.+.++||+||+.++++|+.|+....|..+...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999988887899999999999999999999999999999998888665556688999999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc--ceEeCCCCC
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA 168 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~~ 168 (380)
+|+..+..+|++|.+|..|..++|...... |+ .+.|+|++|+.++.. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQP---GF-------------------THPGSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCccc---cc-------------------CCCCcceeEEEcccccCceEECCCCC
Confidence 999877889999999999999999865432 21 113689999999974 899999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
++++++.+++.+.+||+++...+++.++++|+|+|+|.+|++++++|+..|+ +|+++.+++++.+.++++|++.+++++
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999999999999998778889999999999999999999999999999 899998999999999999999999887
Q ss_pred C-CCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCce-eecccccc-ccccEEEeeeecC
Q 016933 249 E-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINV-LNERTLKGTFFGN 325 (380)
Q Consensus 249 ~-~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~ 325 (380)
+ .+ +.+.+.++..+++|++||++|+.......+++++++ |+++.+|....... ..+....+ .+++++.++...
T Consensus 218 ~~~~--~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (345)
T cd08260 218 EVED--VAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM- 293 (345)
T ss_pred cchh--HHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC-
Confidence 6 33 667777776668999999999767888999999997 99999987543221 22222223 467777776532
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
..+.+++++++++++++.+.+++.+.++++++++|++.+++++. +|+|++
T Consensus 294 --~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 --PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred --CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 23568889999999988765556789999999999999988776 588764
No 49
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=6.1e-42 Score=327.04 Aligned_cols=344 Identities=19% Similarity=0.237 Sum_probs=278.8
Q ss_pred chhhhhhhhhhcc--CCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC----------CCCCC-cccc
Q 016933 6 GLILTCKAAVAWE--AGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ----------TPLFP-RIFG 69 (380)
Q Consensus 6 ~~~~~~~a~~~~~--~~~~---~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~----------~~~~p-~v~G 69 (380)
-+|.+|||+++.. +++| +++.+.+.|.|+++||+||++++++|++|+....+... ....| .++|
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G 82 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG 82 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence 3677899999954 4543 88999999999999999999999999998776544210 11223 3799
Q ss_pred ccccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcc
Q 016933 70 HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTST 149 (380)
Q Consensus 70 ~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~ 149 (380)
||++|+|+++|++++.|++||+|++.+..+|++|++|+++++++|...... |+. ...|+
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~------------------~~~g~ 141 (398)
T TIGR01751 83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW---GYE------------------TNFGS 141 (398)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc---ccc------------------CCCcc
Confidence 999999999999999999999999999999999999999999999765433 321 11369
Q ss_pred eeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhh--ccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEE
Q 016933 150 FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 226 (380)
Q Consensus 150 ~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~ 226 (380)
|+||+.++.+.++++|+++++++++.+.+.+.+||.++.. .+.+++|++++|+|+ |.+|++++++|+++|+ +++++
T Consensus 142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~ 220 (398)
T TIGR01751 142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAV 220 (398)
T ss_pred ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEE
Confidence 9999999999999999999999999999999999998754 477899999999997 9999999999999999 77788
Q ss_pred cCChhHHHHHHhcCCceEecCCCCC--------------------ccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHH
Q 016933 227 DRSSKRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFEC 285 (380)
Q Consensus 227 ~~~~~~~~~~~~lG~~~vi~~~~~~--------------------~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~ 285 (380)
++++++.+.++++|++.++|+++.+ ..+.+.+.+++++ ++|++|||+|. ..+..++++
T Consensus 221 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~ 299 (398)
T TIGR01751 221 VSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFV 299 (398)
T ss_pred cCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHh
Confidence 8899999999999999999875431 1255667777775 89999999997 678899999
Q ss_pred hhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHH
Q 016933 286 VHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 364 (380)
Q Consensus 286 l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~ 364 (380)
++++ |+++.+|..... ....... .+.++.++.++.+.. ..++++++++++++++.. .+++.+++++++++++
T Consensus 300 l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~ 372 (398)
T TIGR01751 300 CRRG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQ 372 (398)
T ss_pred hccC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHH
Confidence 9997 999999976432 1222222 233666777765432 234788999999997764 3678999999999999
Q ss_pred HHHcCCc-eeEEEecC
Q 016933 365 YMVKGEG-LRCIISME 379 (380)
Q Consensus 365 ~l~~~~~-~Kvvi~~~ 379 (380)
.+.+++. +|+|+++.
T Consensus 373 ~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 373 DVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHcCCCCceEEEEeC
Confidence 9988877 69998764
No 50
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.4e-41 Score=321.22 Aligned_cols=338 Identities=26% Similarity=0.421 Sum_probs=267.7
Q ss_pred hhhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC---CCCCCccccccccEEEEEeCCCCCCC
Q 016933 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDL 86 (380)
Q Consensus 10 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~---~~~~p~v~G~e~vG~V~~vG~~v~~~ 86 (380)
.++++++..++ .+++++.+.|.|+++||+||++++++|++|+.+..+... ...+|.++|||++|+|+++|++++.|
T Consensus 17 ~~~~~~~~~~~-~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
T PLN02702 17 ENMAAWLVGVN-TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHL 95 (364)
T ss_pred ccceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCC
Confidence 34444444554 388999999989999999999999999999998776321 22357889999999999999999999
Q ss_pred CCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCC
Q 016933 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (380)
Q Consensus 87 ~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 166 (380)
++||+|++.+..+|++|.+|++|.+++|....+. +.. ...|+|++|+.++.+.++++|+
T Consensus 96 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~------------------~~~g~~~~y~~v~~~~~~~~P~ 154 (364)
T PLN02702 96 VVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF---ATP------------------PVHGSLANQVVHPADLCFKLPE 154 (364)
T ss_pred CCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc---CCC------------------CCCCcccceEEcchHHeEECCC
Confidence 9999999999999999999999999999753221 110 0136999999999999999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
++++++++.. .+++++|+++ ....+.++++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.+++
T Consensus 155 ~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~ 232 (364)
T PLN02702 155 NVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVL 232 (364)
T ss_pred CCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEe
Confidence 9999888752 2445577775 7788999999999998999999999999999977888889999999999999998876
Q ss_pred CCCCCccHHHHHHHH---hCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeee
Q 016933 247 TSEHDRPIQEVIAEM---TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF 323 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~---~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 323 (380)
++.....+.+.+.++ .++++|++||++|+...+..++++++++ |+++.+|.......+.. .....+++++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 233 VSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNEMTVPL-TPAAAREVDVVGVFR 310 (364)
T ss_pred cCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCcccH-HHHHhCccEEEEecc
Confidence 643222366666554 2348999999999767899999999997 99999997542211111 122347888888653
Q ss_pred cCCCCCCChHHHHHHHHcCCCCCCCceeeeecc--ccHHHHHHHHHcCCc-eeEEEe
Q 016933 324 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF--SEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
. ...+.+++++++++.+.+.+++++.|++ +++++|++.+.+++. +|+++.
T Consensus 311 ~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 311 Y----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred C----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 2 2468889999999988765567788665 799999999988766 699985
No 51
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.5e-42 Score=319.53 Aligned_cols=309 Identities=20% Similarity=0.270 Sum_probs=251.9
Q ss_pred hhhhhhccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC-CCCCccccccccEEEEEeCCCCC
Q 016933 11 CKAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS 84 (380)
Q Consensus 11 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G~e~vG~V~~vG~~v~ 84 (380)
|||+++.++++| +++++++.|.|+++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 689999888753 788899999999999999999999999999988876542 45689999999999999999999
Q ss_pred C-CCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEe
Q 016933 85 D-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK 163 (380)
Q Consensus 85 ~-~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~ 163 (380)
+ |++||+|++... ..|+|+||+.++.+.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------------------------~~g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------------------------SYGTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------------------------CCCcchheeeecHHHeEE
Confidence 6 999999985410 015899999999999999
Q ss_pred CCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEE-c-CCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 016933 164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (380)
Q Consensus 164 ~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~-G-~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~ 241 (380)
+|+++++++++++++.+.|||.. .+.... +++.++|+ | +|.+|++++|+|+.+|+ +|+++++++++.++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999999888889999754 455555 45566665 5 59999999999999999 89999999999999999999
Q ss_pred ceEecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEE
Q 016933 242 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLK 319 (380)
Q Consensus 242 ~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~ 319 (380)
++++++++.+ +.+.+++.+++ ++|++||++|+ ......+++++++ |+++.+|.........++.. .+.+++++.
T Consensus 190 ~~~i~~~~~~--~~~~v~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08291 190 EYVLNSSDPD--FLEDLKELIAKLNATIFFDAVGG-GLTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265 (324)
T ss_pred cEEEECCCcc--HHHHHHHHhCCCCCcEEEECCCc-HHHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence 9999887655 88888888876 89999999998 5667789999997 99999997543321112222 245888998
Q ss_pred eeeecCCCC---CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 320 GTFFGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 320 g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
++....+.. .+.+.+++++++ +.+ ++++++.|+|+|+.+|++.+.+++. +|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 266 GFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 887654422 235677788877 654 4568899999999999999988766 799873
No 52
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=3.8e-41 Score=319.17 Aligned_cols=343 Identities=26% Similarity=0.345 Sum_probs=273.8
Q ss_pred hhhhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
||++++.+++ +++++++++|.+ +++||+||++++++|++|+....|..+ ..+|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 6788887776 499999999996 799999999999999999999887654 3468899999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccC---CCCcccccCCCcccccCCCccccccCCcceeeEEEEecc--ceEeC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRIN---PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKI 164 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~ 164 (380)
|+|++.+..+|+.|.+|.+++.++|.+..+. ..+|+... ....|+|++|+.++.+ .++++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~g~~a~y~~v~~~~~~~~~l 143 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDM---------------GPYGGGQAEYLRVPYADFNLLKL 143 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCccccccccccccc---------------CCCCCeeeeEEEeecccCcEEEC
Confidence 9999999999999999999999999763221 00011000 0013689999999976 89999
Q ss_pred CCCCCcc---chhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 016933 165 NPLAPLD---KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (380)
Q Consensus 165 p~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~ 241 (380)
|++++++ .++.+++.+++||+++ ..+.+++|++|||.|+|.+|++++|+|+++|+.+|++++++++|.++++++|+
T Consensus 144 P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 222 (375)
T cd08282 144 PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA 222 (375)
T ss_pred CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 9999998 5677888899999997 77889999999999889999999999999998678889999999999999998
Q ss_pred ceEecCCCCCccHHHHHHHHhCCCccEEEEcccChh-----------hHHHHHHHhhcCCcEEEEEcCCCCCce------
Q 016933 242 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID-----------NMISAFECVHDGWGVAVLVGVPSKDAV------ 304 (380)
Q Consensus 242 ~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~~~------ 304 (380)
+ .+++++.+ +.+.+.+++++++|+++||+|+.. .+..++++++++ |+++.+|.......
T Consensus 223 ~-~v~~~~~~--~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~ 298 (375)
T cd08282 223 I-PIDFSDGD--PVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAA 298 (375)
T ss_pred e-EeccCccc--HHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccc
Confidence 4 56665533 777787776668999999999742 488999999997 99998886431110
Q ss_pred -----eecccc-ccccccEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 305 -----FMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 305 -----~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
..+... .+.++..+.+... ...+.+.+++++++++++.+..++++.|+++++++|++.+.+++..|+|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 299 AKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 111111 1225555555432 2235688899999999887655678999999999999999888755998863
No 53
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=5.6e-41 Score=314.86 Aligned_cols=338 Identities=28% Similarity=0.404 Sum_probs=275.8
Q ss_pred hhhhhhccCCCCeEEEEeecCCCC-CCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||+++..++ .++++++++|.|. ++||+||+.++++|+.|+....|..+ ...|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 6788887664 5999999999985 99999999999999999988877554 3447889999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc--ceEeCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 167 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~ 167 (380)
|+|++.+..+|+.|.+|..+..++|.+.... |.. + ....+|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLF---GYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCccc---ccc---c------------cCCCCCceeEEEEcccccCceEECCCC
Confidence 9999999999999999999999999753221 110 0 00124699999999965 99999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
+++++++.+++++.|||+++. ...+.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.++++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999974 47889999999998899999999999999975788888899999999999985 4555
Q ss_pred CCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-ccccccccEEEeeeecC
Q 016933 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGN 325 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~~ 325 (380)
+..+ +.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|..... ..... ...+.+++++.+..
T Consensus 219 ~~~~--~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--- 291 (344)
T cd08284 219 EDAE--PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR--- 291 (344)
T ss_pred CCcC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---
Confidence 5443 77778887775 8999999999867889999999997 999999976522 11221 22244677766442
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 377 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~ 377 (380)
....+.+.++++++.++.+.+.+++.+.+++++++++++.+.+++.+|+|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 2234578999999999988765556788999999999999887666888875
No 54
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-41 Score=316.04 Aligned_cols=330 Identities=24% Similarity=0.378 Sum_probs=276.2
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.++++++++++.+.|.++++||+||++++++|++|+....|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 68999999988899999999999999999999999999999988877665556688999999999999999998899999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
+|++.+..+|+.|++|..+.+++|.+.... |.. ..|+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY---GEE-------------------LDGFFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCcccccc---ccc-------------------cCceeeeeeecchhceEECCCCCCH
Confidence 999998899999999999999999875432 211 1368999999999999999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~ 249 (380)
.+++.+++.+.+||+++.+. .++++++|+|+|+ |.+|++++++|+..|+ +++++++++++.+.++++ ++++++.+
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987555 8899999999998 9999999999999999 888888999999999888 77777654
Q ss_pred CCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-cccccccEEEeeeecCCCC
Q 016933 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKP 328 (380)
Q Consensus 250 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~ 328 (380)
+ +.+.++++ +++|+++|++|+ .....++++++++ |+++.+|.......+.... ..+.+++++.+... ..
T Consensus 215 -~--~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 284 (334)
T PRK13771 215 -K--FSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---AT 284 (334)
T ss_pred -h--HHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CC
Confidence 2 55566654 379999999998 5788999999997 9999999764322211111 12347778877642 23
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
.+.++++++++.++.+.. .+++.|+++++++|++.+.+++. +|+++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 285 KRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 456889999999997653 46789999999999999988766 6999875
No 55
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=4.1e-41 Score=314.76 Aligned_cols=334 Identities=25% Similarity=0.415 Sum_probs=274.5
Q ss_pred hhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCCE
Q 016933 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 91 (380)
Q Consensus 12 ~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gdr 91 (380)
|+++.++.+..+++++++.|+|.++||+||+.++++|++|+....+......+|.++|||++|+|+++|++++.|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 46777777777999999999999999999999999999999998876655567899999999999999999999999999
Q ss_pred EE-ecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 92 VL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 92 V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
|+ .....+|++|.+|..+..++|....+.. +|.. .. .....|+|+||+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~-----~~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKY---------PD-----GTITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcc-cccc---------cC-----CCcCCCcceeEEEechhheEECCCCCCH
Confidence 97 5566799999999999999998765431 0100 00 0122469999999999999999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~ 250 (380)
++++.+.+.+.+||+++. ...+++|++++|.|+|.+|++++++|+.+|+ +++++++++++.++++++|++.+++.+..
T Consensus 146 ~~aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~ 223 (337)
T cd05283 146 AAAAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDP 223 (337)
T ss_pred HHhhhhhhHHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcch
Confidence 999999999999999864 4568999999998889999999999999999 89999999999999999999998876653
Q ss_pred CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeeeecCCCCC
Q 016933 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPR 329 (380)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~ 329 (380)
+ +.+ . ..+++|++||++|....+..++++++++ |+++.+|...... .++... +.+++++.++.... .
T Consensus 224 ~--~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~ 291 (337)
T cd05283 224 E--AMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---R 291 (337)
T ss_pred h--hhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---H
Confidence 3 222 1 2348999999999855689999999997 9999998764322 222232 34888998877543 3
Q ss_pred CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 330 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
+.++++++++.++++++ . .+.|+++++++||+.+.+++. +|+|++
T Consensus 292 ~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 292 KETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 56888999999997754 3 478999999999999998887 698874
No 56
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=7.5e-41 Score=313.62 Aligned_cols=325 Identities=22% Similarity=0.318 Sum_probs=262.5
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-----------CCCCCccccccccEEEEEe
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV 79 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-----------~~~~p~v~G~e~vG~V~~v 79 (380)
|||+++..+ ++++++++.|+|+++||+||+.++++|+.|+....|... ....|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 688888665 599999999999999999999999999999998876221 2235788999999999999
Q ss_pred CCCCCC-CCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEec
Q 016933 80 GEGVSD-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 158 (380)
Q Consensus 80 G~~v~~-~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~ 158 (380)
|+++++ |++||+|++.+...|+.|+.|..|... ...|+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------------------------~~~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------------------------EAPGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------------------------CCCCceeeeEEech
Confidence 999987 999999999999999999999432110 01368999999999
Q ss_pred cceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 016933 159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 159 ~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~ 238 (380)
+.++++|+++++++++ ++.++++||++ ...+++++|++|||+|+|.+|.+++|+|+.+|+..++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999998876 66688899998 578899999999999889999999999999999668888889999999999
Q ss_pred cCCceEecCCCCCc--cHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccc
Q 016933 239 FGVTDFVNTSEHDR--PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNE 315 (380)
Q Consensus 239 lG~~~vi~~~~~~~--~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 315 (380)
+|+++++++++.+. .+. .+.....+ ++|+++|++|+...+..++++++++ |+++.+|.......... ...+.++
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~-~~~~~~~ 281 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEP-ALAIRKE 281 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCH-HHHhhcc
Confidence 99988998766431 222 34444444 8999999999855788899999997 99999987642222111 1113366
Q ss_pred cEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 316 RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 316 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
+++.++... ..+.+.+++++++++.+.+.+++++.|++++++++++.+.+++. +|+|++
T Consensus 282 ~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 282 LTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred eEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 666654321 22368899999999988766667899999999999999988876 698874
No 57
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3e-41 Score=316.23 Aligned_cols=314 Identities=19% Similarity=0.243 Sum_probs=249.3
Q ss_pred hhhhhhhhhhc-cCCC-C----eEEEEe---ecC-CCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccc--cccE
Q 016933 7 LILTCKAAVAW-EAGK-P----LIIQDV---EVA-PPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH--EAAG 74 (380)
Q Consensus 7 ~~~~~~a~~~~-~~~~-~----~~~~~~---~~p-~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~--e~vG 74 (380)
.++++|.|++. .+.+ | |++++. +.| ++++||||||+.++++|+.|...+.+.......|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 34456777763 2222 1 888774 565 357999999999999999987654432222345889998 8899
Q ss_pred EEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEE
Q 016933 75 VVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYT 154 (380)
Q Consensus 75 ~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~ 154 (380)
+|..+|+++++|++||+|+.. |+|+||.
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~ 112 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYS 112 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEEE
Confidence 999999999999999999732 4799999
Q ss_pred EEeccc--eEe--CCCCCCcc-chhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcC
Q 016933 155 VVHSGC--VAK--INPLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR 228 (380)
Q Consensus 155 ~v~~~~--~~~--~p~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~ 228 (380)
.++... +++ +|++++++ +++++++++.|||+++.+.+.+++|++|||+|+ |++|++++|+||.+|+ +|+++++
T Consensus 113 ~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~ 191 (348)
T PLN03154 113 LIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 191 (348)
T ss_pred EEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcC
Confidence 998753 544 59999986 688899999999999877889999999999998 9999999999999999 8999989
Q ss_pred ChhHHHHHH-hcCCceEecCCCC-CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCce-e
Q 016933 229 SSKRFEEAK-KFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-F 305 (380)
Q Consensus 229 ~~~~~~~~~-~lG~~~vi~~~~~-~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~ 305 (380)
++++.++++ ++|++.++++++. + +.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|....... .
T Consensus 192 ~~~k~~~~~~~lGa~~vi~~~~~~~--~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~ 267 (348)
T PLN03154 192 SSQKVDLLKNKLGFDEAFNYKEEPD--LDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSA 267 (348)
T ss_pred CHHHHHHHHHhcCCCEEEECCCccc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCC
Confidence 999999997 7999999998643 3 7777877776689999999998 6889999999997 99999997643211 0
Q ss_pred ---ecccc-ccccccEEEeeeecCCC--CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 306 ---MTKPI-NVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 306 ---~~~~~-~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
..... .+.+++++.|+..+.+. ..+.++++++++++|++++. +.+.|+|+++++|++.+++++. +|+||++
T Consensus 268 ~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 268 SQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred CCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEe
Confidence 01111 23488899988654321 12357789999999988754 6678999999999999999887 6999987
Q ss_pred C
Q 016933 379 E 379 (380)
Q Consensus 379 ~ 379 (380)
.
T Consensus 346 ~ 346 (348)
T PLN03154 346 A 346 (348)
T ss_pred c
Confidence 5
No 58
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.4e-40 Score=311.22 Aligned_cols=333 Identities=33% Similarity=0.556 Sum_probs=277.2
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++. +++.++++|.+.++||+|+|.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68888887765 89999999999999999999999999999998887665555688999999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
+|+..+..+|+.|..|+.+++++|...+.. ++ ...|+|++|+.++.+ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQVL---GV-------------------HRDGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCee---ee-------------------cCCCcceeEEEechh-eEECCCCCCH
Confidence 999988899999999999999999533221 11 113699999999999 9999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~ 250 (380)
++++.+ ..+.++++++ ....+++|++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.++++++|+++++++.+.
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~ 213 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDE 213 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCccc
Confidence 999877 4677888875 77889999999999889999999999999999 88999899999999999999999988775
Q ss_pred CccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccc-cccEEEeeeecCCCC
Q 016933 251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP 328 (380)
Q Consensus 251 ~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~ 328 (380)
+ +.+.+.+.+++ ++|+++|++|+...+..++++++++ |+++.+|..... .......+. +++++.++. ...
T Consensus 214 ~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~---~~~ 285 (337)
T cd08261 214 D--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGP--VTFPDPEFHKKELTILGSR---NAT 285 (337)
T ss_pred C--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCC--CccCHHHHHhCCCEEEEec---cCC
Confidence 5 77888887776 7999999998877889999999997 999999866422 222222222 566666653 223
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEEec
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIISM 378 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~Kvvi~~ 378 (380)
.+.+.+++++++++.+.+.+.+...++++++.++++.+.+++ . +|+|+++
T Consensus 286 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 286 REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 346888999999998876334678899999999999998873 5 6999874
No 59
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-40 Score=312.84 Aligned_cols=335 Identities=27% Similarity=0.408 Sum_probs=275.9
Q ss_pred hhhhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||+++..+++ +++++.++|.| +++||+||+.++++|++|+....|..+ ...|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccCCC
Confidence 68899877665 99999999996 899999999999999999988877554 2347899999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc--ceEeCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 167 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~ 167 (380)
|+|++.+...|+.|.+|+.+..++|.+..+. |.. ..|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFW---GAF-------------------VDGGQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCcc---cCC-------------------CCCceEEEEEcchhhCceEECCCC
Confidence 9999877788999999999999999865443 211 12589999999975 99999999
Q ss_pred CCccchh-----hcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 016933 168 APLDKVC-----ILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242 (380)
Q Consensus 168 ~~~~~aa-----~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~ 242 (380)
++++.+. ++...+.+||+++ ..+.+++|++++|.|+|.+|++++|+|+++|+++++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9872221 2235678899885 567899999999998899999999999999996689998899999999999999
Q ss_pred eEecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-cccccccEEEe
Q 016933 243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKG 320 (380)
Q Consensus 243 ~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g 320 (380)
.++++.+.+ +.+.+.+.+++ ++|+++|++|+...+..++++++++ |+++.+|..... ..+.. ..+.+++++.+
T Consensus 216 ~v~~~~~~~--~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 216 DIVAERGEE--AVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG--VELDVRELFFRNVGLAG 290 (345)
T ss_pred eEecCCccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCCC--CccCHHHHHhcceEEEE
Confidence 999887654 77778887766 8999999999878899999999997 999999876422 22222 23457888877
Q ss_pred eeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 321 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
... ...+.+.++++++.++++.+.+++++.++++++++|++.+.+++..|++|+.
T Consensus 291 ~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 291 GPA---PVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred ecC---CcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 532 1234688999999999887655567899999999999998887777999863
No 60
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1e-40 Score=309.86 Aligned_cols=319 Identities=26% Similarity=0.391 Sum_probs=262.6
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++ +++++++++|+|+++||+||+.++++|++|..+..|..+ .|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 6889998765 499999999999999999999999999999998877543 5788999999999999987 78999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
||...+..+|+.|.+|..+.+..|.+.... +... ..|+|++|+.++.+.++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------~~g~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTVL---GIVD------------------RDGAFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCccc---CccC------------------CCCceEEEEEechHHeEECcCCCCH
Confidence 999999999999999999999999876543 2110 1258999999999999999999998
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~ 250 (380)
++++.+ ..++++|.. .+...++++++|||+|+|.+|++++|+|+.+|+ +|++++.++++.++++++|++.++++++.
T Consensus 133 ~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~ 209 (319)
T cd08242 133 EQAVFA-EPLAAALEI-LEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE 209 (319)
T ss_pred HHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc
Confidence 888764 345566654 577889999999999889999999999999999 69999899999999999999888776431
Q ss_pred CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCCCC
Q 016933 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT 330 (380)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 330 (380)
..++++|+++|++|+...+..++++++++ |+++..+.......++.. ..+.++.++.++..+
T Consensus 210 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~------ 271 (319)
T cd08242 210 ----------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASFDLT-KAVVNEITLVGSRCG------ 271 (319)
T ss_pred ----------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCccCHH-HheecceEEEEEecc------
Confidence 12238999999999867888999999997 999987764322222211 123477778776432
Q ss_pred ChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 331 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
.+++++++++++++++.+++++.|+++++++||+.+.++..+|++|+.
T Consensus 272 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 272 PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 388899999999887666688999999999999999877667999863
No 61
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.7e-40 Score=315.62 Aligned_cols=328 Identities=28% Similarity=0.397 Sum_probs=266.4
Q ss_pred CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCC------C-CCCCCccccccccEEEEEeCCCCCCCCCCCEEEe
Q 016933 22 PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG------Q-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP 94 (380)
Q Consensus 22 ~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~------~-~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~ 94 (380)
.+++++++.|.++++||+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus 38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 49999999999999999999999999999998776311 1 2346789999999999999999999999999999
Q ss_pred cCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC------
Q 016933 95 VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA------ 168 (380)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~------ 168 (380)
.+..+|+.|++|+++.+.+|.+.... |+. ..|+|++|+.++.+.++++|+.+
T Consensus 118 ~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~v~v~~~~~~~lP~~~~~~~~~ 175 (384)
T cd08265 118 EEMMWCGMCRACRSGSPNHCKNLKEL---GFS-------------------ADGAFAEYIAVNARYAWEINELREIYSED 175 (384)
T ss_pred CCCCCCCCChhhhCcCcccCCCccee---eec-------------------CCCcceeeEEechHHeEECCccccccccC
Confidence 99999999999999999999864432 211 13689999999999999999864
Q ss_pred Cccchhhcchhhhhhhhhhhhc-cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 169 PLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
...++++++.++++||+++... .++++|++|||+|+|.+|++++|+|+.+|+.+|++++++++|.++++++|+++++++
T Consensus 176 ~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~ 255 (384)
T cd08265 176 KAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNP 255 (384)
T ss_pred CCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcc
Confidence 1333666777889999997655 689999999999889999999999999998779999899999999999999999887
Q ss_pred CCC-CccHHHHHHHHhCC-CccEEEEcccCh-hhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeee
Q 016933 248 SEH-DRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFF 323 (380)
Q Consensus 248 ~~~-~~~~~~~~~~~~~~-~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~ 323 (380)
++. ...+.+.+.+++++ ++|+++|++|.. ..+..++++++++ |+++.+|..... ...... ...+..++.++.-
T Consensus 256 ~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~l~~~~~ 332 (384)
T cd08265 256 TKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATT--VPLHLEVLQVRRAQIVGAQG 332 (384)
T ss_pred cccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCC--CcccHHHHhhCceEEEEeec
Confidence 653 12377888888877 899999999873 4678999999997 999999865422 222222 2235667776642
Q ss_pred cCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 016933 324 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 376 (380)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi 376 (380)
. .....+.+++++++++.+.+.+++++.|+++++.+|++.+.++..+|+|+
T Consensus 333 ~--~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 333 H--SGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred c--CCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 1 12346899999999998876556788999999999999977765578876
No 62
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.4e-40 Score=310.43 Aligned_cols=336 Identities=29% Similarity=0.478 Sum_probs=277.3
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++. +.+++.++|++.+++|+||+.++++|+.|+.+..+.......|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68888887774 89999999999999999999999999999998877553344578999999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccc-----eEeCC
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-----VAKIN 165 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~-----~~~~p 165 (380)
+|++.+..+|++|.+|..++.++|....+. |.. ..|+|++|+.++.+. ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF---GNL-------------------YDGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee---ccC-------------------CCCcceeeEEecccccccccEEECC
Confidence 999999999999999999999999875442 211 136999999999998 99999
Q ss_pred CCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEe
Q 016933 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi 245 (380)
+++++.+++.+ ..+.+||+++. ...+++|++|||+|+|.+|++++|+|+..|++.|+++.+++++.+.++++|+++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999998876 68899999874 45899999999998899999999999999994488888999999999999999998
Q ss_pred cCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeeee
Q 016933 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF 323 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 323 (380)
++++.+ +.+.+.+..++ ++|++||++++...+..++++++++ |+++.+|.............. ..+++.+.++..
T Consensus 216 ~~~~~~--~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 216 DAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred cCCccC--HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 887655 77778877776 7999999999766888999999997 999999865432222222221 236666666542
Q ss_pred cCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 016933 324 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 377 (380)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~ 377 (380)
. ..+.+++++++++++.+.+.+.+...|+++++.++++.+.+++.+|+|++
T Consensus 293 ~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 293 A---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred C---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 2 23468889999999987654446788999999999999988774488874
No 63
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.3e-40 Score=310.45 Aligned_cols=334 Identities=29% Similarity=0.491 Sum_probs=269.4
Q ss_pred hhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCC-C--CCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-Q--TPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 13 a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~-~--~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|+++.+.+. +++++.+.|.|.++||+||+.++++|+.|+..+.+.. . ....|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 345666654 9999999999999999999999999999988764211 1 12357789999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
|+|++.+..+|+.|++|+.|.+++|....+. +.. ...|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATP------------------PVDGTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccc------------------cCCCceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999754221 100 0136999999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~ 249 (380)
+++++.+ .++++||+++ ..+.+++|++|||+|+|.+|++++|+|+.+|+++|+++.+++++.++++++|++.++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9998877 4788999885 7889999999999988999999999999999954889989999999999999999998876
Q ss_pred CCc-cHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCC
Q 016933 250 HDR-PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 327 (380)
Q Consensus 250 ~~~-~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 327 (380)
.+. .|.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.......+.+. ....+++.+.++...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 291 (343)
T cd05285 217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY--- 291 (343)
T ss_pred ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC---
Confidence 541 136667777766 7999999999855889999999997 999999865422111111 123366677665422
Q ss_pred CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEE
Q 016933 328 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCII 376 (380)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~--~Kvvi 376 (380)
.+.+.+++++++++.+.+.+.+.+.|+++++.+|++.+.+++. +|++|
T Consensus 292 -~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 -ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred -hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2568889999999987654456788999999999999988753 79987
No 64
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.6e-40 Score=308.23 Aligned_cols=337 Identities=31% Similarity=0.443 Sum_probs=271.3
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCC---CCCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~---~~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+.+..++..+.+.+.+.|.|.++|++||++++++|+.|+.++.+.. .....|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6888888777669999999999999999999999999999988754421 1234577899999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|++.+..+|+.|.+|..+++++|....+. |. ...|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKIL---GV-------------------DTDGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccceE---ec-------------------cCCCcceEEEEechHHcEECcCC
Confidence 999999999999999999999999999753221 21 12368999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
++.+. ++++.++.++++++. ...++|++|||+|+|.+|++++|+|+.+|+.+|++++++++|.++++++|+++++++
T Consensus 139 ~~~~~-a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEI-ASIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHH-hhhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 98754 456667788888754 455789999999889999999999999998668888889999999999999988887
Q ss_pred CCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCC
Q 016933 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 326 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 326 (380)
+..+ +. .+.++.++ ++|++||++|+......++++++++ |+++.+|.........+....+.+++.+.+... .
T Consensus 216 ~~~~--~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 289 (341)
T cd05281 216 REED--VV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITG--R 289 (341)
T ss_pred cccc--HH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEec--C
Confidence 6544 66 67777766 8999999999877889999999997 999999875432222222222346667766541 1
Q ss_pred CCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 327 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
...+.+.++++++.++.+.+.+.+.+.++++++++||+.+.+++.+|+|+++
T Consensus 290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 2234578899999999887655577889999999999999887755998863
No 65
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.3e-40 Score=308.92 Aligned_cols=333 Identities=26% Similarity=0.400 Sum_probs=271.7
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++....+++.+.|+|.++||+||+.++++|++|+....|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 789999888775448999999999999999999999999999888775432 2477899999999999999999999999
Q ss_pred EEEec-CccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 91 HVLPV-FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 91 rV~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
+|++. ...+|+.|++|+.+..++|++.... |+. ..|+|++|+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKNA---GYT-------------------VDGGMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCcccc---Ccc-------------------ccCcceeEEEEchHHeEeCCCCCC
Confidence 99864 4678999999999999999876533 221 136999999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
+++++.++..+.|||+++ ..+.+++|++|||+|+|.+|++++++|+.+ |+ +|+++++++++.+.++++|++.+++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999996 778899999999999999999999999984 99 899999999999999999999998875
Q ss_pred CCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCC
Q 016933 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYK 327 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~ 327 (380)
..+ .+.+.+++..+ ++|.++++.++...+..++++++++ |+++.+|..... ...... ...++.++.++..+
T Consensus 216 ~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~--- 287 (338)
T PRK09422 216 RVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPES--MDLSIPRLVLDGIEVVGSLVG--- 287 (338)
T ss_pred ccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCC--ceecHHHHhhcCcEEEEecCC---
Confidence 421 26667777665 6885555555558899999999997 999999875322 222222 22366777665432
Q ss_pred CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 016933 328 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 379 (380)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~ 379 (380)
..+.+++++++++++++.. .+ +.++++++++|++.+.+++. +|+++++.
T Consensus 288 ~~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 288 TRQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred CHHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 1346888999999997753 34 46899999999999988877 59998764
No 66
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.1e-40 Score=284.51 Aligned_cols=318 Identities=23% Similarity=0.350 Sum_probs=258.9
Q ss_pred hhhhhhhhhhccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC-CCCCccccccccEEEEEeCCC
Q 016933 7 LILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEG 82 (380)
Q Consensus 7 ~~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G~e~vG~V~~vG~~ 82 (380)
++...||+++.+.|.| ++++..++|.....+|+||.+|+.|||+|+..++|.++. +++|.|-|.|++|+|+.+|++
T Consensus 16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~ 95 (354)
T KOG0025|consen 16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN 95 (354)
T ss_pred cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence 3445799999999988 888999999887888999999999999999999999874 678999999999999999999
Q ss_pred CCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceE
Q 016933 83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA 162 (380)
Q Consensus 83 v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~ 162 (380)
+++|++||+|+... .+.|+|++|.+.+++.++
T Consensus 96 vkgfk~Gd~VIp~~------------------------------------------------a~lGtW~t~~v~~e~~Li 127 (354)
T KOG0025|consen 96 VKGFKPGDWVIPLS------------------------------------------------ANLGTWRTEAVFSESDLI 127 (354)
T ss_pred cCccCCCCeEeecC------------------------------------------------CCCccceeeEeecccceE
Confidence 99999999998552 124799999999999999
Q ss_pred eCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----H
Q 016933 163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----K 237 (380)
Q Consensus 163 ~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~ 237 (380)
++++.++++.||++.++..|||.+|.+..++.+||+|+-.|+ +++|++.+|+||++|+ +.|.+.|++...+.+ +
T Consensus 128 ~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk 206 (354)
T KOG0025|consen 128 KVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLK 206 (354)
T ss_pred EcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHH
Confidence 999999999999999999999999989999999999999998 9999999999999999 777777887666555 5
Q ss_pred hcCCceEecCCCCC-ccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccccccc
Q 016933 238 KFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER 316 (380)
Q Consensus 238 ~lG~~~vi~~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 316 (380)
.+||++|+..++.. ....... .....+.+.|||+|+ .....+.+.|..+ |..+.+|.++.....-.....+++.+
T Consensus 207 ~lGA~~ViTeeel~~~~~~k~~--~~~~~prLalNcVGG-ksa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl 282 (354)
T KOG0025|consen 207 SLGATEVITEEELRDRKMKKFK--GDNPRPRLALNCVGG-KSATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDL 282 (354)
T ss_pred HcCCceEecHHHhcchhhhhhh--ccCCCceEEEeccCc-hhHHHHHHHHhcC-ceEEEecCccCCCcccccchheeccc
Confidence 59999998654422 1111111 112378999999999 6667889999997 99999999875543333344466999
Q ss_pred EEEeeeecCCCCCC--------ChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEecC
Q 016933 317 TLKGTFFGNYKPRT--------DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISME 379 (380)
Q Consensus 317 ~i~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~--~Kvvi~~~ 379 (380)
+++|+++..|...+ .+.++..+++.|++.-. -....+|++...|++...+... +|-+|.++
T Consensus 283 ~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 283 KLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred eeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 99999998776443 25677788899987644 2466799999999987655433 46666653
No 67
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=4.8e-41 Score=305.92 Aligned_cols=269 Identities=27% Similarity=0.434 Sum_probs=220.1
Q ss_pred cccccccEEEEEeCCCCC------CCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCc
Q 016933 67 IFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP 140 (380)
Q Consensus 67 v~G~e~vG~V~~vG~~v~------~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~ 140 (380)
++|||++|+|+++|++|+ +|++||||++.+..+|+.|.+|++|.++.|.+.... |.....+ +
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~~--~------- 68 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALDS--G------- 68 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---CcccccC--C-------
Confidence 589999999999999999 899999999999999999999999999999876543 3221000 0
Q ss_pred cccccCCcceeeEEEEecc-ceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC
Q 016933 141 VNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG 219 (380)
Q Consensus 141 ~~~~~~~G~~a~~~~v~~~-~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g 219 (380)
....|+|+||+.++++ .++++|+++++++++.+++.+.|+|+++ +.....+|++|||+|+|.+|++++|+||.+|
T Consensus 69 ---~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 69 ---WPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred ---ccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 0013699999999997 7999999999999999999999999986 4455669999999999999999999999999
Q ss_pred CcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcC
Q 016933 220 ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 220 ~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
+++|++++++++|.++++++|++.++++++ ..+.+.+++.+ ++|++||++|.+..+..++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 966999999999999999999999887654 33456666665 8999999999878899999999997 99999997
Q ss_pred CCCCceeeccccc-cccccEEEeeeecCCCCCCChHHHHHHHHcC--CCCCCCceeeeeccccH
Q 016933 299 PSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEI 359 (380)
Q Consensus 299 ~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~ 359 (380)
..+.....++... +.+++++.|+..+ ..+++.++++++.++ ++++.+++++.|+++|+
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 220 VFPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 5422233333333 3489999997643 235689999999874 66677789999999874
No 68
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.2e-39 Score=304.96 Aligned_cols=334 Identities=28% Similarity=0.441 Sum_probs=278.7
Q ss_pred hhhhhhccCCCC-eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCCC
Q 016933 11 CKAAVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 11 ~~a~~~~~~~~~-~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
|||+++..++++ +.+++.+.|.+++++|+|++.++++|+.|.....+..+ ....|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 689999988887 68888888899999999999999999999998877654 3456788999999999999999999999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
||+|++.+..+|+.|.+|..++.+.|...... |.. ..|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP---GLG-------------------IDGGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCcc---ccc-------------------cCCcceeeEEechHHeEECCCCC
Confidence 99999999999999999999999999543322 211 13589999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
++++++.++.++.+||+++.....++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999998778889999999998889999999999999999 799999999999999999998888776
Q ss_pred CCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCC
Q 016933 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 327 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 327 (380)
+.. +.+.+ ....+ ++|+++|++|....+..++++++++ |+++.+|.......+.. ...+.++.++.++...
T Consensus 218 ~~~--~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--- 289 (338)
T cd08254 218 DDS--PKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDL-SDLIARELRIIGSFGG--- 289 (338)
T ss_pred CcC--HHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCH-HHHhhCccEEEEeccC---
Confidence 544 55555 44444 8999999998867899999999997 99999987543222222 1123367777775422
Q ss_pred CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 328 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
..+.+.+++++++++.+.+. .+.++++++.++++.+.+++. +|+|+++
T Consensus 290 ~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 23568889999999987654 578999999999999998877 6998864
No 69
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.7e-39 Score=304.75 Aligned_cols=336 Identities=29% Similarity=0.486 Sum_probs=274.6
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+.++ +++++.++|+++++||+||+.++++|+.|+....+.. ....|.++|+|++|+|+.+|+++..|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999988765 8999999999999999999999999999998877654 234578899999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
+|+..+...|+.|.+|..+++..|+..... |.. ..|+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDYI---GSR-------------------RDGAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcceE---ecc-------------------cCCcccceEEechHHeEECcCCCCH
Confidence 999999999999999999999999865332 211 2369999999999999999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~ 250 (380)
++++.+ ..+++||.++. ...++++++|||+|+|.+|++++|+|+.+|++.|+++++++++.++++++|++.++++++.
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~ 214 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEE 214 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccc
Confidence 999887 57889999874 7789999999999889999999999999999549999889999999999999888887653
Q ss_pred CccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc--ccccccEEEeeeecCCC
Q 016933 251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYK 327 (380)
Q Consensus 251 ~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~--~~~~~~~i~g~~~~~~~ 327 (380)
. .+.+....++ ++|+++|++|....+..++++++++ |+++.+|.......+..... .+.++.++.++......
T Consensus 215 ~---~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd08236 215 D---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA 290 (343)
T ss_pred c---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence 2 4556666665 7999999998767889999999997 99999997643221221111 12467788777653221
Q ss_pred --CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHc-CCc-eeEEE
Q 016933 328 --PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK-GEG-LRCII 376 (380)
Q Consensus 328 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~-~~~-~Kvvi 376 (380)
..+.+++++++++++++.+.+.+.+.+++++++++++.+++ +.. +|+|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 291 PFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 13468889999999987643446788999999999999998 444 58764
No 70
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=5.2e-40 Score=307.43 Aligned_cols=310 Identities=20% Similarity=0.242 Sum_probs=246.8
Q ss_pred hhhhhhccCCC-CeEEEEeec----CCCCCCeEEEEEeeeecCcccchhhccCCCC-CCCCccccccc--cEEEEEeCCC
Q 016933 11 CKAAVAWEAGK-PLIIQDVEV----APPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEA--AGVVESVGEG 82 (380)
Q Consensus 11 ~~a~~~~~~~~-~~~~~~~~~----p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G~e~--vG~V~~vG~~ 82 (380)
+|++....+.. .|++++.++ |+|++|||||||++++||+.|+..+.|.... ...|+++|+++ .|++..+|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 46666433332 289999988 8899999999999999999999988875432 35678899754 5666668888
Q ss_pred CCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEec-cce
Q 016933 83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCV 161 (380)
Q Consensus 83 v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~-~~~ 161 (380)
++.|++||+|+.. |+|+||++++. ..+
T Consensus 88 v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~~ 115 (338)
T cd08295 88 NPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQDL 115 (338)
T ss_pred CCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhce
Confidence 8899999999832 47999999999 799
Q ss_pred EeCC-CCCCcc-chhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 016933 162 AKIN-PLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 162 ~~~p-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~ 238 (380)
+++| +.+++. +++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+++++
T Consensus 116 ~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~ 194 (338)
T cd08295 116 RKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKN 194 (338)
T ss_pred eecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 9995 678876 789999999999999878889999999999997 9999999999999999 89999899999999998
Q ss_pred -cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCcee----ecc-cccc
Q 016933 239 -FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF----MTK-PINV 312 (380)
Q Consensus 239 -lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~-~~~~ 312 (380)
+|+++++++.+.+ .+.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|........ ... ...+
T Consensus 195 ~lGa~~vi~~~~~~-~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~ 271 (338)
T cd08295 195 KLGFDDAFNYKEEP-DLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNII 271 (338)
T ss_pred hcCCceeEEcCCcc-cHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHh
Confidence 9999999875431 27777777766689999999998 7889999999997 999999875422110 011 1223
Q ss_pred ccccEEEeeeecCCCC--CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 313 LNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 313 ~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
.+++++.++....+.. .+.+.++++++.++++++. +...|+++++++|++.+++++. +|+|+++
T Consensus 272 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 272 YKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred hccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 4677888765433221 1236788899999987654 4456999999999999988876 6999874
No 71
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.3e-39 Score=303.84 Aligned_cols=329 Identities=29% Similarity=0.477 Sum_probs=271.5
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++..+++++.+++.+.|.+.++||+|+++++++|++|+....|..+....|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68888876566699999999999999999999999999999999888665556688999999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
+|++....+|+.|.+|+.+++++|.+... +|.. ..|+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRAE---YGEE-------------------VDGGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCccc---cccc-------------------cCCeeeeEEEechhheEECCCCCCH
Confidence 99999999999999999999999986522 1311 2368999999999999999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~ 249 (380)
++++.+++++.+||+++.. +.+++++++||+|+ |.+|++++++++..|+ +|+++.+++++.+.++++|.+.+++.++
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999999765 88999999999997 9999999999999999 8888889999999999999888776543
Q ss_pred CCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCcee-eccccccccccEEEeeeecCCCC
Q 016933 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF-MTKPINVLNERTLKGTFFGNYKP 328 (380)
Q Consensus 250 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~ 328 (380)
+.+.+.+.. ++|++++++|. .....++++++++ |+++.+|........ ... ....++.++.++.. ..
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~ 284 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPG-LLILKEIRIIGSIS---AT 284 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHH-HHHhCCcEEEEecC---CC
Confidence 455555543 69999999998 5688899999997 999999875422111 111 11235666666531 12
Q ss_pred CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 329 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
.+.+++++++++++.+.+ .+++.|+++++++|++.+.+++. +|++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 285 KADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 346788999999997654 36789999999999999988776 588864
No 72
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=9.4e-40 Score=303.94 Aligned_cols=309 Identities=22% Similarity=0.297 Sum_probs=257.3
Q ss_pred hhhhhhccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCC
Q 016933 11 CKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL 86 (380)
Q Consensus 11 ~~a~~~~~~~~~---~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~ 86 (380)
|||+++.+++.+ +++++++.|.+.++||+|||.++++|+.|+..+.|..+ ....|.++|||++|+|+++|++++.|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 688888877654 78899999999999999999999999999998887654 34568899999999999999999999
Q ss_pred CCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCC
Q 016933 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (380)
Q Consensus 87 ~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 166 (380)
++||+|++... .|+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECCC
Confidence 99999985420 25899999999999999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEe
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi 245 (380)
++++++++.+++.+.++|+++ +.+.+++|++|||+|+ |.+|++++|+|+++|+ +++++..++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999998899999985 5688999999999987 9999999999999999 788888888888888889999898
Q ss_pred cCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeee
Q 016933 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFF 323 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~ 323 (380)
++++.+ +.+.+++++++ ++|++||++|+ .....++++++++ |+++.+|... ......... .+.++.++.++..
T Consensus 190 ~~~~~~--~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 190 STEQPG--WQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred cCCCch--HHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEc
Confidence 877654 78888888887 89999999998 5778999999997 9999998753 222222221 2347888888765
Q ss_pred cCCCC-------CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 324 GNYKP-------RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 324 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
..... .+.+.++++++.++.+.+. +.+.|+++++.+|++.+.+++. +|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 265 GRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 43211 1357889999999987653 4678999999999999987665 588864
No 73
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3.7e-39 Score=301.92 Aligned_cols=332 Identities=26% Similarity=0.409 Sum_probs=263.2
Q ss_pred hccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhc-cCCC--CCCCCccccccccEEEEEeCCCCCCCCCCCEE
Q 016933 16 AWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 92 (380)
Q Consensus 16 ~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~-g~~~--~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV 92 (380)
+++.++ +++++.++|.++++||+||+.++++|++|+.... +... ...+|.++|+|++|+|+++|++++.|++||+|
T Consensus 3 ~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V 81 (339)
T cd08232 3 IHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV 81 (339)
T ss_pred eccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence 445554 9999999999999999999999999999987763 3221 12457789999999999999999999999999
Q ss_pred EecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccc
Q 016933 93 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 172 (380)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~ 172 (380)
++.+..+|+.|.+|..|++.+|.+..+. |.... .....|+|++|+.++.+.++++|+++++++
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~--------------~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~ 144 (339)
T cd08232 82 AVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAMR--------------FPHVQGGFREYLVVDASQCVPLPDGLSLRR 144 (339)
T ss_pred EEccCCcCCCChHHhCcCcccCccccce---eeccc--------------cCCCCCceeeEEEechHHeEECcCCCCHHH
Confidence 9999999999999999999999874322 11100 001136999999999999999999999998
Q ss_pred hhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCc
Q 016933 173 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 252 (380)
Q Consensus 173 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~ 252 (380)
|+. ..+++++|+++.+...+ ++++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|+++++++++.+
T Consensus 145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~- 221 (339)
T cd08232 145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP- 221 (339)
T ss_pred hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh-
Confidence 876 56888999987665556 899999988899999999999999986789998999999999999999999876543
Q ss_pred cHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCCCCCC
Q 016933 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTD 331 (380)
Q Consensus 253 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~ 331 (380)
+.+ .. ...+++|+++|++|+...+..++++++++ |+++.+|..... ...... .+.+++++.+... ..+.
T Consensus 222 -~~~-~~-~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~ 291 (339)
T cd08232 222 -LAA-YA-ADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGGP--VPLPLNALVAKELDLRGSFR----FDDE 291 (339)
T ss_pred -hhh-hh-ccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccCcHHHHhhcceEEEEEec----CHHH
Confidence 211 11 11236999999999767788999999997 999999865411 221222 1346777776542 2346
Q ss_pred hHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 332 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
+++++++++++.+.+.+.+.+.|+++++++|++.+.+++. +|+|+++
T Consensus 292 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 292 FAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 8889999999988766657889999999999999987765 6999864
No 74
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=6.7e-39 Score=300.39 Aligned_cols=334 Identities=31% Similarity=0.494 Sum_probs=278.1
Q ss_pred hhhhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC-CCCCccccccccEEEEEeCCCCCCCCC
Q 016933 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 11 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
|||+++..++ ..+++++++.|.|.++||+||+.++++|++|..++.+..+. ...|.++|+|++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899988776 34999999999999999999999999999999888775432 345678999999999999999999999
Q ss_pred CCEEEecC-ccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 89 GDHVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 89 GdrV~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
||+|+..+ ..+|+.|.+|..++.++|...... |+. ..|+|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS---GYT-------------------VDGTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCcccc---ccc-------------------cCCcceeEEEeccccEEECCCC
Confidence 99998765 688999999999999999765443 221 1258999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
+++.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998655 58999999999997 7799999999999999 8999999999999999999999998
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeeeec
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 324 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 324 (380)
+++.+ +.+.+.+..++ ++|+++|+.++...+..++++++++ |+++.+|... ..........+ .++.++.+....
T Consensus 217 ~~~~~--~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd08297 217 FKKSD--DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLVG 292 (341)
T ss_pred CCCcc--HHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEeccC
Confidence 87654 77788887765 8999999887768889999999997 9999998754 22223322222 367777775432
Q ss_pred CCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 325 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
..+.+++++++++++++.+ .+ +.|++++++++++.+.+++. +|+++++
T Consensus 293 ---~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 293 ---TRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ---CHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 1356888999999998754 23 67999999999999988776 6999875
No 75
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=9.4e-39 Score=299.22 Aligned_cols=332 Identities=30% Similarity=0.450 Sum_probs=269.4
Q ss_pred ccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCC---CCCCCCccccccccEEEEEeCCCCCCCCCCCEEE
Q 016933 17 WEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL 93 (380)
Q Consensus 17 ~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~---~~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~ 93 (380)
++++.++++++.+.|.|+++||+||+.++++|+.|+.++.+.. ....+|.++|+|++|+|+++|++++.|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 5778889999999999999999999999999999988765431 1234577899999999999999999999999999
Q ss_pred ecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccch
Q 016933 94 PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 173 (380)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~a 173 (380)
..+.+.|+.|..|..+...+|...++. |.. ..|+|++|+.++.+.++++|++++.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKIF---GVD-------------------TDGCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcceE---eec-------------------CCCcceeEEEeehHHcEECcCCCChHhh
Confidence 999999999999999999999876432 210 1368999999999999999999998554
Q ss_pred hhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCcc
Q 016933 174 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 253 (380)
Q Consensus 174 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~ 253 (380)
+++..+.+|++++ ....++|++++|.|+|.+|++++|+|+.+|++.|+++++++++.++++++|++.++++.+.+
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~-- 217 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED-- 217 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccC--
Confidence 5667888898875 34577899999988899999999999999994488888899999999999998888876655
Q ss_pred HHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCCCCCh
Q 016933 254 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDL 332 (380)
Q Consensus 254 ~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 332 (380)
+.+.+.++.++ ++|+++|++|+...+..++++++++ |+++.+|.........+....+.+++++.+.. . ....+.+
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 294 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGIT-G-RHMFETW 294 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEe-c-CCchhhH
Confidence 77788777665 8999999999767889999999997 99999987532222222212233666666543 1 1222457
Q ss_pred HHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 016933 333 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 378 (380)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~~Kvvi~~ 378 (380)
.+++++++++++.+.+.+.+.++++++.++++.+.+++.+|+|+++
T Consensus 295 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 295 YTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 8899999999887555578999999999999999877667999875
No 76
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.1e-38 Score=297.99 Aligned_cols=331 Identities=31% Similarity=0.494 Sum_probs=272.9
Q ss_pred hhhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCC
Q 016933 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (380)
Q Consensus 11 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gd 90 (380)
|||+++.+++. +++.+.+.|++.++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+.+|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999988775 999999999999999999999999999999988876543 3678999999999999999999999999
Q ss_pred EEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 91 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
+|++.+...|+.|.+|..+++++|...... |.. ..|+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTAV---GVT-------------------RNGGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCccee---ccC-------------------CCCcceeEEEecHHHcEECcCCCCH
Confidence 999999999999999999999999765322 110 1368999999999999999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~ 250 (380)
.+++.+ +.+.++++++ ..+.++++++|||+|+|.+|.+++++|+..|+++|+++++++++.+.++++|++.+++.++.
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 214 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRE 214 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCC
Confidence 988766 6788999886 77899999999999889999999999999999548888899999999999999888887665
Q ss_pred CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccc-cccEEEeeeecCCCCC
Q 016933 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPR 329 (380)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~ 329 (380)
+ +... +...++++|++||++|....+..++++++++ |+++.+|..............+. +++++.++... .
T Consensus 215 ~--~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 286 (334)
T cd08234 215 D--PEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----P 286 (334)
T ss_pred C--HHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----H
Confidence 4 4344 3333348999999998767888999999997 99999987643222333333222 66777776422 2
Q ss_pred CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 330 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
+.+++++++++++++.+.+.+++.+++++++++++.+.+ +. +|+|+
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 287 YTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 458889999999988765556788999999999999988 55 68886
No 77
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=5.6e-39 Score=301.42 Aligned_cols=299 Identities=17% Similarity=0.213 Sum_probs=231.3
Q ss_pred eEEEEeecCCCC-CCeEEEEEeeeecCcccchhhc---cCCCCCCCCccccccccEEEEEeCCCCCCCCCCCEEEecCcc
Q 016933 23 LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWE---SKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 98 (380)
Q Consensus 23 ~~~~~~~~p~~~-~~eVlV~v~~~~l~~~D~~~~~---g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~ 98 (380)
+++++.+.|+|. ++||||||.++|||+.|..... +.....++|.++|||++|+|+++|+++++|++||||+.+
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--- 99 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF--- 99 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence 889999999874 9999999999999998864332 111123567899999999999999999999999999843
Q ss_pred CCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccc----hh
Q 016933 99 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK----VC 174 (380)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~----aa 174 (380)
.++|+||+.++.+.++++|+++++++ ++
T Consensus 100 ------------------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 100 ------------------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred ------------------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 03799999999999999999865433 45
Q ss_pred hcchhhhhhhhhhhhccCCCCC--CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCC
Q 016933 175 ILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH 250 (380)
Q Consensus 175 ~l~~~~~ta~~~l~~~~~~~~g--~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~ 250 (380)
++++++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+.+++ +|+++++++++.
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~ 211 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD 211 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC
Confidence 6777899999998777888877 99999997 9999999999999998679999999999999877 999999988775
Q ss_pred CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCC---cee--eccc--cccc--cccEEEee
Q 016933 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---AVF--MTKP--INVL--NERTLKGT 321 (380)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~--~~~~--~~~~--~~~~i~g~ 321 (380)
+ +.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|..... ... .... ..+. ++++....
T Consensus 212 ~--~~~~i~~~~~~gvd~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (345)
T cd08293 212 N--VAERLRELCPEGVDVYFDNVGG-EISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERF 287 (345)
T ss_pred C--HHHHHHHHCCCCceEEEECCCc-HHHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEE
Confidence 5 8888888776689999999998 5678999999997 999999853211 011 0100 0111 23333222
Q ss_pred eecCCC--CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 322 FFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 322 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
...... ..+.++++++++.++++.+. ....++++++++|++.+.+++. +|+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 288 LVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 211111 01236677889999988654 3445699999999999988876 6999874
No 78
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.4e-39 Score=301.93 Aligned_cols=304 Identities=22% Similarity=0.257 Sum_probs=243.7
Q ss_pred hhhhhhhcc-C-CCC----eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCC
Q 016933 10 TCKAAVAWE-A-GKP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV 83 (380)
Q Consensus 10 ~~~a~~~~~-~-~~~----~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v 83 (380)
+||||++.+ + +.+ +++++.+.|+|+++||||||.+++||+.|...... ..++|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 589998887 3 333 88999999999999999999999999887653221 124688999999999985 44
Q ss_pred CCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc---c
Q 016933 84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG---C 160 (380)
Q Consensus 84 ~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~---~ 160 (380)
+.|++||||+.. ++|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999832 268999999999 9
Q ss_pred eEeCCCCCC--c---cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH
Q 016933 161 VAKINPLAP--L---DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE 234 (380)
Q Consensus 161 ~~~~p~~~~--~---~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~ 234 (380)
++++|++++ + ..+++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 999999987 2 2334678899999999878899999999999986 9999999999999999 8999999999999
Q ss_pred HHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCce--e---e-cc
Q 016933 235 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F---M-TK 308 (380)
Q Consensus 235 ~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~---~-~~ 308 (380)
+++++|+++++++++.+ +.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|....... . . +.
T Consensus 183 ~l~~~Ga~~vi~~~~~~--~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~ 258 (329)
T cd08294 183 WLKELGFDAVFNYKTVS--LEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ 258 (329)
T ss_pred HHHHcCCCEEEeCCCcc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence 99999999999987765 7788888776689999999998 7889999999997 99999986422111 1 1 11
Q ss_pred ccccccccEEEeeeecCCC--CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 309 PINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 309 ~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
...+.+++++.++....+. ..+.+++++++++++++.+. ....++++++++|++.+++++. +|+++++
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 1123477788876543321 11236678899999988765 3456899999999999988877 6999864
No 79
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.1e-38 Score=298.57 Aligned_cols=335 Identities=24% Similarity=0.364 Sum_probs=274.8
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++...+.+ +++.+.+.|.+.+++|+|++.++++|++|+..+.|..+ ...+|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 678888744433 77888888888999999999999999999998877543 234578999999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|++.+..+|+.|.+|.++.+++|+...+. |.. ..|+|++|+.++.+.++++|+.
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGIL---GEH-------------------VDGGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhcccccccccccccc---ccc-------------------cCcceeEEEEechHHceeCCCC
Confidence 999999999999999999999999999865332 321 1258999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
+++++++.+++.+.+||+++.+...+.++++++|+|+ +.+|++++++++..|+ +++.+++++++.+.+++++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999999999999878888999999999997 7999999999999999 7888889999999999898877776
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-cccccccEEEeeeec
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFG 324 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~ 324 (380)
..+.+ +.+.+.+...+ ++|++++++|. ..+...+++++++ |+++.++..... ...... ..+.+++++.+....
T Consensus 218 ~~~~~--~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 218 YRKED--FVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred cCChH--HHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecC
Confidence 65433 66666666655 89999999998 6788999999997 999999876432 112222 224467777776532
Q ss_pred CCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 325 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
. ...+.+++++++++.+.+ ++++.|+++++++|++.+.+++. +|+++++
T Consensus 293 ~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 293 T---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred C---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 2 235788889999987654 46789999999999999987766 6998863
No 80
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=8.2e-39 Score=298.34 Aligned_cols=323 Identities=27% Similarity=0.386 Sum_probs=266.4
Q ss_pred hhhhhhccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCC
Q 016933 11 CKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 86 (380)
Q Consensus 11 ~~a~~~~~~~~----~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~ 86 (380)
|||+++.+++. ++++.+.+.|.++++||+||+.++++|++|+....|..+....|.++|||++|+|+++|+++..|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 67888887773 58888888888999999999999999999999888766555678899999999999999999999
Q ss_pred CCCCEEEec-CccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCC
Q 016933 87 EVGDHVLPV-FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (380)
Q Consensus 87 ~~GdrV~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 165 (380)
++||+|++. ..++|++|.+|+.+.+++|....+. |+. ..|+|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT---GYT-------------------VDGGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc---ccc-------------------cCCceEEEEEecchhEEECC
Confidence 999999764 4578999999999999999866544 221 13589999999999999999
Q ss_pred CCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEe
Q 016933 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi 245 (380)
+++++.+++.+++.+.+||+++ ..+++++++++||+|+|.+|++++++|+..|+ +|+++.+++++.+.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999997 88999999999999999999999999999999 899998999999999999998887
Q ss_pred cCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecC
Q 016933 246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 325 (380)
+.+.. ..+++|+++++.+....+..++++++++ |+++.+|... ......+...+.++..+.++...
T Consensus 217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~- 282 (329)
T cd08298 217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYELLWGEKTIRSVANL- 282 (329)
T ss_pred ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhhhhCceEEEEecCC-
Confidence 76542 1237999999977767899999999997 9999988543 11111111223355666665422
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
..+.+.+++++++++.+.+ .++.|+++++++|++.+++++. +|+|+
T Consensus 283 --~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 --TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2235788889999987754 3588999999999999988776 58764
No 81
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=5.6e-39 Score=298.87 Aligned_cols=291 Identities=19% Similarity=0.241 Sum_probs=235.3
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCCEEEecCccCCCC
Q 016933 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGD 102 (380)
Q Consensus 23 ~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~ 102 (380)
+++.+++.|+|++|||||||.++++|+.+.. |.......|.++|.|++|+|+++|+ .|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8899999999999999999999999996543 4333334578999999999999874 59999999843
Q ss_pred CccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeC----CCCCCccch-hhcc
Q 016933 103 CRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI----NPLAPLDKV-CILS 177 (380)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~----p~~~~~~~a-a~l~ 177 (380)
++|++|+.++.+.+.++ |++++++++ ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 26899999999988887 899999987 6789
Q ss_pred hhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHH
Q 016933 178 CGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 256 (380)
Q Consensus 178 ~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~ 256 (380)
+++.|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.++++++|++.++++++.+ .+.+
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~ 198 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEE 198 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHH
Confidence 999999999888899999999999996 9999999999999999 899998999999999999999999887632 2555
Q ss_pred HHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCc---eee---ccccccccccEEEeeeecCCCC--
Q 016933 257 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---VFM---TKPINVLNERTLKGTFFGNYKP-- 328 (380)
Q Consensus 257 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~~~---~~~~~~~~~~~i~g~~~~~~~~-- 328 (380)
.++..+++++|++||++|+ ..+..++++++++ |+++.+|...... ... .....+.+++++.++....+..
T Consensus 199 ~~~~~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (325)
T TIGR02825 199 TLKKASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV 276 (325)
T ss_pred HHHHhCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence 6666655589999999998 5779999999997 9999998753211 111 1111233677887765432211
Q ss_pred -CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 329 -RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 329 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
.+.+++++++++++++++. +...|+++++.+|++.+++++. +|+|++
T Consensus 277 ~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 277 RQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 2357889999999988765 4567899999999999998876 698874
No 82
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=8.9e-39 Score=297.60 Aligned_cols=320 Identities=26% Similarity=0.338 Sum_probs=257.1
Q ss_pred hhhhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||+++..++ +.+++++.+.|+++++||+||+.++++|++|+....+ .....+|.++|||++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6788886665 3488888888889999999999999999999988764 2222457789999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
|+|++.+..+|++|++|++|.+++|+...+. |+ ...|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGII---GV-------------------VSNGGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCcccee---ec-------------------cCCCceeeEEEcCHHHceeCCCCCC
Confidence 9999999999999999999999999865432 21 1236899999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
+++++.+++.+.+||+++. .+++++|++++|+|+ |.+|++++++|+++|+ +|+++. +.++++++|++++++.+
T Consensus 138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch
Confidence 9999999999999999965 488999999999997 9999999999999999 777775 23777889998888764
Q ss_pred CCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeeeecCCC
Q 016933 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYK 327 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~ 327 (380)
+ ..+.+++++ +++|+++|++|+ ..+...+++++++ |+++.+|... ......+...+ .++.++.++..+.
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGGT-- 281 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCCC--
Confidence 3 345566666 689999999998 6889999999997 9999998742 11122222222 3566777764332
Q ss_pred CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeE
Q 016933 328 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRC 374 (380)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kv 374 (380)
.+.+.++++++... .+ .+.+.|+++++++|++.+.+++. +|+
T Consensus 282 -~~~~~~~~~l~~~~--~~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 282 -RKELLELVKIAKDL--KV--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred -HHHHHHHHHHHHcC--Cc--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 34688888888543 22 35688999999999999887665 354
No 83
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=3e-38 Score=294.64 Aligned_cols=327 Identities=30% Similarity=0.480 Sum_probs=268.2
Q ss_pred hhhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCCE
Q 016933 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 91 (380)
Q Consensus 12 ~a~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~Gdr 91 (380)
||+++.++|..+++++.+.|.+.+++|+|++.++++|++|+....+......+|.++|||++|+|+++|++++.|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 57788888666999999999999999999999999999999988876554556889999999999999999999999999
Q ss_pred EEecCc-cCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc
Q 016933 92 VLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (380)
Q Consensus 92 V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 170 (380)
|++.+. .+|+.|.+|+++++++|.+..+. ++. ..|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-------------------TQGGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-------------------cCCccccEEEEcHHHeEECCCCCCH
Confidence 986543 67999999999999999986544 210 1258999999999999999999999
Q ss_pred cchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC
Q 016933 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (380)
Q Consensus 171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~ 250 (380)
.+++.+.+.+.+||.++.. ..++++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++....
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 216 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAE 216 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCc
Confidence 9999999999999998744 789999999999888899999999999999 89999999999999999999888876543
Q ss_pred CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCCCCC
Q 016933 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPR 329 (380)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~ 329 (380)
+ .... ..+++|+++|+++.......++++++++ |+++.++..... ....... .+.++.++.++..+. .
T Consensus 217 ~--~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~ 285 (330)
T cd08245 217 L--DEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---R 285 (330)
T ss_pred c--hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---H
Confidence 3 2222 2247999999988767889999999997 999999865322 1111111 233667777765432 2
Q ss_pred CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 330 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
..+.++++++.++.+.+ ..+.|+++++.++|+.+.+++. +|+|+
T Consensus 286 ~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 286 ADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 46788889999997764 3578999999999999988776 57764
No 84
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.6e-38 Score=293.93 Aligned_cols=323 Identities=24% Similarity=0.294 Sum_probs=254.7
Q ss_pred hhhhhhccCCCC--eEEEE-eecCCCCCCeEEEEEeeeecCcccchhhccCCC--------------------CCCCCcc
Q 016933 11 CKAAVAWEAGKP--LIIQD-VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------------------TPLFPRI 67 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~-~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~--------------------~~~~p~v 67 (380)
|||+++...+.+ +++.+ .+.|.|.+++|+|||.++++|++|+.+..|..+ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 678887766643 55543 467778999999999999999999988776432 2456889
Q ss_pred ccccccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCC
Q 016933 68 FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGT 147 (380)
Q Consensus 68 ~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~ 147 (380)
+|||++|+|+++|++++.|++||||++.+...|+.|..|.. |. .. |.. ..
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~---~~---~~~-------------------~~ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID---YI---GSE-------------------RD 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc---cc---CCC-------------------CC
Confidence 99999999999999999999999999988888888766421 21 10 110 02
Q ss_pred cceeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEE
Q 016933 148 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 226 (380)
Q Consensus 148 G~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~ 226 (380)
|+|++|+.++...++++|+++++.+++.+++++.+||+++ ....+++|+++||+|+ |.+|++++++|+++|+ +++++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 5899999999999999999999999999999999999986 7788999999999998 9999999999999999 68888
Q ss_pred cCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCcee
Q 016933 227 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 305 (380)
Q Consensus 227 ~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 305 (380)
++++ +.+.++++|++.+++.+... +.+ ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|... ....
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~~~--~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~ 280 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDAPL--LAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIA-GPVV 280 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCCcc--HHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccC-Cccc
Confidence 6665 88888999997666544332 333 344444 89999999998 6889999999997 9999998653 2212
Q ss_pred eccccc-cccccEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 306 MTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 306 ~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
.++... +.++.++.++... ..+.+.++++++.++++.. ++++.|+++++++|++.+.+++. +|+++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 281 ELDLRTLYLKDLTLFGSTLG---TREVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cCCHHHhhhcceEEEEeecC---CHHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 233333 4477888887643 2346888999999997653 46788999999999999987766 6988863
No 85
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=8.6e-38 Score=291.19 Aligned_cols=314 Identities=22% Similarity=0.276 Sum_probs=252.8
Q ss_pred hhhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCC
Q 016933 10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 10 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
+|||+++.+++.+ +++++++.|+|+++||+||+.++|+|++|+.+..+..+....|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999887775 88999999999999999999999999999988877665555688999999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|+... .+.|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~------------------------------------------------~~~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQ------------------------------------------------SALGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECC------------------------------------------------CCCcceeeEEEcCHHHceeCCCC
Confidence 999997431 01258999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
+++++++.+++.+.+||.++...+.+++|++++|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999999999999998777788999999999975 9999999999999999 7888889999999999999988888
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccccc-ccE-E-Eeee
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLN-ERT-L-KGTF 322 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~-i-~g~~ 322 (380)
.+..+ +.+.+++.+++ ++|+++|++|+ ..+..++++++++ |+++.+|..... ........+.+ +.. . ....
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (327)
T PRK10754 192 YREEN--IVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSL 266 (327)
T ss_pred CCCCc--HHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEeccee
Confidence 76554 77788888776 89999999998 6788899999997 999999876421 11111111111 111 0 1100
Q ss_pred ecCCCCC----CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 323 FGNYKPR----TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 323 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
....... +.+.++++++.++.+++..+..+.|+++++.++++.+.+++. +|+||.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 0001111 124567889999988765445788999999999999988776 699985
No 86
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2.4e-37 Score=289.24 Aligned_cols=308 Identities=17% Similarity=0.187 Sum_probs=244.4
Q ss_pred hhhhhccC---CCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCC
Q 016933 12 KAAVAWEA---GKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 86 (380)
Q Consensus 12 ~a~~~~~~---~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~ 86 (380)
||+++.++ +.+ +++.++|.|+|+++||+||++++++|+.|..+..+..+...+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 56777665 443 8888899999999999999999999999998887765545568899999999999999999999
Q ss_pred CCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCC
Q 016933 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (380)
Q Consensus 87 ~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 166 (380)
++||+|+.... ....|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~----------------------------------------------~~~~g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD----------------------------------------------IDRPGSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC----------------------------------------------CCCCCcccceEEEcHHHcccCCC
Confidence 99999985310 00135899999999999999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCC-----CCeEEEEcC-CHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhc
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF 239 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~G~-g~~G~~ai~la~~~-g~~~vi~~~~~~~~~~~~~~l 239 (380)
++++++++.+++++.|||+++....++++ |++|||+|+ |.+|++++|+|+.+ |+ +|+++.+++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999999877788876 999999986 99999999999998 99 899998999999999999
Q ss_pred CCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccc-cccEE
Q 016933 240 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTL 318 (380)
Q Consensus 240 G~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i 318 (380)
|++++++++. + +.+.+++...+++|+++|++++.......+++++++ |+++.++... .++ ...+. ++.++
T Consensus 194 g~~~~~~~~~-~--~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~---~~~--~~~~~~~~~~~ 264 (336)
T TIGR02817 194 GAHHVIDHSK-P--LKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDPA---ELD--ISPFKRKSISL 264 (336)
T ss_pred CCCEEEECCC-C--HHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEcccc---ccc--chhhhhcceEE
Confidence 9999998654 2 777777754448999999987667889999999997 9999885321 112 11222 44555
Q ss_pred EeeeecC--CCC-------CCChHHHHHHHHcCCCCCCCceeeee---ccccHHHHHHHHHcCCc-eeEEEe
Q 016933 319 KGTFFGN--YKP-------RTDLPSVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 319 ~g~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
.+..+.. ... .+.+.++++++.++.+++. +.+.+ +++++++|++.+.+++. +|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 4432221 000 1236788899999977543 33444 46899999999998877 688864
No 87
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.8e-37 Score=290.77 Aligned_cols=314 Identities=24% Similarity=0.336 Sum_probs=254.4
Q ss_pred hhhhhhccCCCC---eEEEEeecCCCCC-CeEEEEEeeeecCcccchhhccCCCCC-C----CCccccccccEEEEEeCC
Q 016933 11 CKAAVAWEAGKP---LIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWESKGQTP-L----FPRIFGHEAAGVVESVGE 81 (380)
Q Consensus 11 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~eVlV~v~~~~l~~~D~~~~~g~~~~~-~----~p~v~G~e~vG~V~~vG~ 81 (380)
|||+++.+.+.+ +.+++.+.|.|.+ +||+||+.++++|+.|+....|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999888875 8999999998887 999999999999999999887755321 2 577999999999999999
Q ss_pred CCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccce
Q 016933 82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV 161 (380)
Q Consensus 82 ~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~ 161 (380)
++..|++||+|++... +.|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence 9999999999985421 1258999999999999
Q ss_pred EeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCCh----hHHHHH
Q 016933 162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEA 236 (380)
Q Consensus 162 ~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~----~~~~~~ 236 (380)
+++|+++++++++.+++.+.|||+++.....+++|++|||+|+ |.+|++++|+|++.|+ +++++.+++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999877788999999999987 9999999999999999 777776665 678888
Q ss_pred HhcCCceEecCCCC-CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-ccccc
Q 016933 237 KKFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLN 314 (380)
Q Consensus 237 ~~lG~~~vi~~~~~-~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~ 314 (380)
+++|+++++++++. ...+.+.++...++++|++||++|+ ..+...+++++++ |+++.+|..... ...... ..+.+
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~ 268 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFK 268 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhC
Confidence 99999999887654 0126677777665589999999998 5677889999997 999999865322 222222 22457
Q ss_pred ccEEEeeeecCCCC--C-----CChHHHHHHHHcCCCCCCCceeeee---ccccHHHHHHHHHcCCc-eeEEEec
Q 016933 315 ERTLKGTFFGNYKP--R-----TDLPSVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 315 ~~~i~g~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
+.++.+........ . ..+.++++++.++++.+. ....+ +++++.++++.+.+++. +|+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 88888876543211 1 147788889999987654 34456 99999999999988776 5999874
No 88
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=4.9e-37 Score=283.20 Aligned_cols=300 Identities=27% Similarity=0.455 Sum_probs=247.3
Q ss_pred hhhhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||++..+.+ +.+++++++.|.+.++||+||+.++++|++|.....+.......|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5788877655 249999999999999999999999999999998887765334457899999999999999999999999
Q ss_pred CEEEecCc-cCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 90 DHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 90 drV~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
|+|++.+. .+|+.|++|..+.+..|...... |. ...|+|++|+.++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGI---GT-------------------QADGGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCcee---ee-------------------cCCCceEEEEEcchHHeEECcCCC
Confidence 99998774 78999999999999999864221 11 123699999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEE--cCChhHHHHHHhcCCceEec
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~--~~~~~~~~~~~~lG~~~vi~ 246 (380)
++++++ +...++++|+++...+.++++++|||.|+|.+|++++|+|+.+|+ +|+++ .+++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999877 666888999998888899999999998889999999999999999 67666 345668889999999888 7
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeeeec
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG 324 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 324 (380)
+...+ +.+.+.+..++ ++|+++|++|+...+...+++++++ |+++.+|.... ....++... +.++++|.|++.+
T Consensus 216 ~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 291 (306)
T cd08258 216 GGEED--LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSS 291 (306)
T ss_pred CCcCC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecC
Confidence 76554 77778777765 8999999998767888999999997 99999998652 223333222 3489999998864
Q ss_pred CCCCCCChHHHHHHHHcC
Q 016933 325 NYKPRTDLPSVVDMYMNK 342 (380)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~ 342 (380)
. ++++++++++++.|
T Consensus 292 ~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 292 T---PASWETALRLLASG 306 (306)
T ss_pred c---hHhHHHHHHHHhcC
Confidence 4 45799999988764
No 89
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.6e-36 Score=279.78 Aligned_cols=330 Identities=27% Similarity=0.355 Sum_probs=265.7
Q ss_pred hhhhhhccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~--~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++...+ +.+++++.+.|.++++|++|++.++++|++|+....|..+ ....|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899988664 3388888888888999999999999999999998877543 234678899999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|++.....|+.+.+ .+|...... |. ...|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~------~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPP------TAEDEASAL---GG-------------------PIDGVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEecccccccccc------ccccccccc---cc-------------------ccCceeeeEEEecHHHeEECCCC
Confidence 999999877666655443 333221111 11 11368999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
+++.+++.+++.+.+||+++.+.+.+++|++++|+|+|.+|++++++|++.|+ +|++++.++++.+.++++|++.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999998777889999999999889999999999999999 79999899999999999999998887
Q ss_pred CC-CCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecC
Q 016933 248 SE-HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (380)
Q Consensus 248 ~~-~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 325 (380)
+. .+ +.+.+++.+++ ++|+++|+++. ..+..++++++++ |+++.+|..............+.+++++.++..+.
T Consensus 212 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T cd08276 212 RTTPD--WGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS 287 (336)
T ss_pred CcccC--HHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc
Confidence 65 33 77778888776 89999999986 6788999999997 99999987543211111122245788888876543
Q ss_pred CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 326 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
...+.++++++.++.+.+. .++.+++++++++++.+.+++. +|+++++
T Consensus 288 ---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 ---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred ---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 3468888888888866543 5688999999999999988776 5888763
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=3.4e-36 Score=279.97 Aligned_cols=312 Identities=20% Similarity=0.231 Sum_probs=253.8
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC---CCCCCccccccccEEEEEeCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD 85 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~---~~~~p~v~G~e~vG~V~~vG~~v~~ 85 (380)
|||+++.+++.+ +++.+.+.|.+.++||+|++.++++|++|+....|..+ ....|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 688888776653 66777777778999999999999999999988877543 2355788999999999999999999
Q ss_pred CCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCC
Q 016933 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (380)
Q Consensus 86 ~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 165 (380)
+++||+|++... ...|+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~-----------------------------------------------~~~g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG-----------------------------------------------RAGGGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC-----------------------------------------------CCCceeeEEEEEchHHeEeCC
Confidence 999999985420 013589999999999999999
Q ss_pred CCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE
Q 016933 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (380)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v 244 (380)
+++++++++.+++.+.||| ++.....++++++++|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 4577888999999999996 9999999999999999 89999999999999999999888
Q ss_pred ecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-cccccccEEEeee
Q 016933 245 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTF 322 (380)
Q Consensus 245 i~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 322 (380)
++.++.+ +.+.+.+..++ ++|+++|++|+ .....++++++++ |+++.+|...... ..++. ..+.++.++.++.
T Consensus 192 ~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08244 192 VDYTRPD--WPDQVREALGGGGVTVVLDGVGG-AIGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLL 266 (324)
T ss_pred EecCCcc--HHHHHHHHcCCCCceEEEECCCh-HhHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEee
Confidence 8876654 77778777776 89999999998 4668999999997 9999998764332 23221 2244777887766
Q ss_pred ecCCCC---CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 323 FGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 323 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
...... .+.+.+.++++.++++.. .+++.|+++++.+|++.+++++. +|+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 267 GVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 433211 134677888888887653 36788999999999999988776 5998864
No 91
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.4e-36 Score=262.17 Aligned_cols=293 Identities=18% Similarity=0.277 Sum_probs=239.1
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC---CCCCCccccccc----cEEEEEeCCCCCCCCCCCEEEec
Q 016933 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEA----AGVVESVGEGVSDLEVGDHVLPV 95 (380)
Q Consensus 23 ~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~---~~~~p~v~G~e~----vG~V~~vG~~v~~~~~GdrV~~~ 95 (380)
|+++++++|+|++||||||+.|.+++|- ++|++. ..-.|+-+|... +|+|++ |..+.|++||.|+..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~--S~~~~f~~GD~V~~~ 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVA--SNHPGFQPGDIVVGV 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEe--cCCCCCCCCCEEEec
Confidence 9999999999999999999999999883 333332 222455566555 445555 567889999999843
Q ss_pred CccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCc--cch
Q 016933 96 FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL--DKV 173 (380)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~--~~a 173 (380)
.+|++|.+++.+.+.+++++.-+ ...
T Consensus 101 ----------------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~L 128 (340)
T COG2130 101 ----------------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYL 128 (340)
T ss_pred ----------------------------------------------------ccceEEEeechhhceecCCCCCCcchHH
Confidence 27999999999999999865422 222
Q ss_pred hhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCCC
Q 016933 174 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHD 251 (380)
Q Consensus 174 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~~ 251 (380)
..|..+..|||.+|++.+++++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+++++ +|+|.++||+..+
T Consensus 129 gvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d 207 (340)
T COG2130 129 GVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED 207 (340)
T ss_pred hhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCccc
Confidence 3366688999999999999999999999987 9999999999999999 99999999999999999 9999999999987
Q ss_pred ccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCcee------eccccccccccEEEeeee-c
Q 016933 252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF------MTKPINVLNERTLKGTFF-G 324 (380)
Q Consensus 252 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~------~~~~~~~~~~~~i~g~~~-~ 324 (380)
+.+++++..+.++|+.||++|+ +.++..+..|+.. +|+.++|..+.-... ...+..+.+.+++.|+.. .
T Consensus 208 --~~~~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~ 283 (340)
T COG2130 208 --FAQALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVAS 283 (340)
T ss_pred --HHHHHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEech
Confidence 9999999999999999999999 8999999999996 999999976432111 111222337889999876 3
Q ss_pred CCCCC--CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecCC
Q 016933 325 NYKPR--TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED 380 (380)
Q Consensus 325 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~~ 380 (380)
.+..+ +..+++..|+++|+++.++ +-.-+|+++++||..|.++++ +|.|+++.+
T Consensus 284 ~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 284 DYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 33222 4578899999999998875 445589999999999999999 699999864
No 92
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.9e-36 Score=282.43 Aligned_cols=311 Identities=24% Similarity=0.315 Sum_probs=252.5
Q ss_pred hhhhhhhccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCC
Q 016933 10 TCKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVS 84 (380)
Q Consensus 10 ~~~a~~~~~~~~----~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~ 84 (380)
+|||+++.+++. ++++++++.|.|.++||+||+.++++|++|+....|... ...+|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 489999987766 388999999999999999999999999999998877554 246788999999999999999999
Q ss_pred CCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeC
Q 016933 85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 164 (380)
Q Consensus 85 ~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~ 164 (380)
.|++||+|++.. .|+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence 999999998531 258999999999999999
Q ss_pred CCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 016933 165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (380)
Q Consensus 165 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~ 243 (380)
|+. +.+++.+++++.+||+++.+...++++++++|+|+ |.+|++++++|+..|+ +|+++.+++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 35677889999999999877788999999999996 9999999999999999 7888889999999999999988
Q ss_pred EecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCc---------eeecccccccc
Q 016933 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---------VFMTKPINVLN 314 (380)
Q Consensus 244 vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---------~~~~~~~~~~~ 314 (380)
+++.+..+ +.+.+....++++|++||++|+ ..+..++++++++ |+++.+|...... ...+....+.+
T Consensus 188 v~~~~~~~--~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd08250 188 PINYKTED--LGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK 263 (329)
T ss_pred EEeCCCcc--HHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence 88766544 6666666555589999999997 7889999999997 9999998764221 01112222447
Q ss_pred ccEEEeeeecCCC--CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 315 ERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 315 ~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
+.++.++...... ..+.+.++++++.++.+.+.....+.++++++++|++.+.+++. +|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 7788877543211 12346778888889877653334566899999999999988766 588874
No 93
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.3e-36 Score=280.39 Aligned_cols=315 Identities=19% Similarity=0.276 Sum_probs=254.0
Q ss_pred hhhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCC
Q 016933 10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL 86 (380)
Q Consensus 10 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~ 86 (380)
||||+++.+++.+ +++++.+.|++.++||+|||.++++|+.|+....+..+ ....|.++|+|++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 6999999887763 67778888889999999999999999999888877543 23456789999999999999999999
Q ss_pred CCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCC
Q 016933 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (380)
Q Consensus 87 ~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 166 (380)
++||+|+... ..|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL-------------------------------------------------PGGGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec-------------------------------------------------CCCceeeEEEecHHHcEeCCC
Confidence 9999998431 125899999999999999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEe
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi 245 (380)
++++.+++.+++++.+||+++...+.+++|++|||+|+ |.+|++++++|+.+|+ +++.+.+++++.+.++++|++.++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999999877788999999999996 9999999999999999 667788999999999999998888
Q ss_pred cCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeeee
Q 016933 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF 323 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 323 (380)
+....+ .+.+.+.+.+++ ++|++||++|+ ..+..++++++++ |+++.+|...+.....+....+ .++.++.++..
T Consensus 191 ~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (334)
T PTZ00354 191 RYPDEE-GFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTL 267 (334)
T ss_pred ecCChh-HHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCCCcccccCHHHHHhhCCEEEeeec
Confidence 775432 266677777765 89999999987 7888999999997 9999998654222111222222 35567777654
Q ss_pred cCCCCC-------CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 016933 324 GNYKPR-------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 379 (380)
Q Consensus 324 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~ 379 (380)
...... +.+++++++++++.+.. .+.+.+++++++++++.+.+++. +|+++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 268 RSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 332111 12466778888887654 36788999999999999988766 69999775
No 94
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.5e-37 Score=281.49 Aligned_cols=302 Identities=28% Similarity=0.428 Sum_probs=229.2
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCC----CCCccccccccEEE---EEeC-CCCCCCCCCCEEEe
Q 016933 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP----LFPRIFGHEAAGVV---ESVG-EGVSDLEVGDHVLP 94 (380)
Q Consensus 23 ~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~----~~p~v~G~e~vG~V---~~vG-~~v~~~~~GdrV~~ 94 (380)
...++.++|.|.+++++|++.++++|+.|+.+..|..... .+|.+++.++.|++ ...| ..+..+..||++..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 5567899999999999999999999999999999876543 47766666655553 3333 22334555555542
Q ss_pred cCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccchh
Q 016933 95 VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC 174 (380)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa 174 (380)
. ...|+|+||+++|...++++|+++++.+||
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 123699999999999999999999999999
Q ss_pred hcchhhhhhhhhhhhcc------CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 175 ILSCGVSTGLGATLNVA------KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 175 ~l~~~~~ta~~~l~~~~------~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
++++++.|||.++.+.. ++++|++|||+|+ |++|++++|+|+..|+ ..+++.+++++.++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 8999999999986 9999999999999996 44555599999999999999999999
Q ss_pred CCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCC-ceeeccccc-ccc-----ccEEEe
Q 016933 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPIN-VLN-----ERTLKG 320 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~-~~~-----~~~i~g 320 (380)
++.+ +.+.++..+.++||+||||+|+ ..+.....++... |+...++...+. ......... ..+ ...+.+
T Consensus 210 ~~~~--~~e~~kk~~~~~~DvVlD~vg~-~~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
T KOG1198|consen 210 KDEN--VVELIKKYTGKGVDVVLDCVGG-STLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKG 285 (347)
T ss_pred CCHH--HHHHHHhhcCCCccEEEECCCC-CccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeec
Confidence 9966 8899999885599999999999 4777888888886 765555443211 111111000 011 111111
Q ss_pred eee---cCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecCC
Q 016933 321 TFF---GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED 380 (380)
Q Consensus 321 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~~ 380 (380)
..+ ......+.+..+.++++.+++ .+.+.+.||++++.+||+.+.+++. +|+++.+.+
T Consensus 286 ~~~~~~~~~~~~~~l~~l~~~ie~gki--kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 286 VNYRWLYFVPSAEYLKALVELIEKGKI--KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred cceeeeeecCCHHHHHHHHHHHHcCcc--cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 111 111233568889999999955 4558999999999999999988666 799998753
No 95
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=3.5e-36 Score=281.59 Aligned_cols=315 Identities=23% Similarity=0.309 Sum_probs=247.0
Q ss_pred hhhhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 11 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|||+++..++ ..+++++++.|.|+++||+||+.++++|++|+....+.. ....|.++|||++|+|+.+|++++.|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 6899998874 338899999999999999999999999999998775533 22357789999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
|+|+......|+ + ..+.|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~----------------------~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP----------------------N-------------------DPRNGAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC----------------------C-------------------CCCCCcccceEEechhheEECCCCCC
Confidence 999976432211 0 11236899999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCC----------CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKP----------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~----------~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~ 238 (380)
+++++.+++.+.+||+++.+...+ ++++++||+|+ |.+|++++++|+.+|+ +|+++. ++++.+.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999997665544 78999999997 9999999999999999 787776 5688999999
Q ss_pred cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhc--CCcEEEEEcCCCCCceeecccccccccc
Q 016933 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD--GWGVAVLVGVPSKDAVFMTKPINVLNER 316 (380)
Q Consensus 239 lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 316 (380)
+|+++++++++.+ +.+.+++++++++|+++|++|++..+..+++++++ + |+++.+|......... . .....
T Consensus 197 ~g~~~v~~~~~~~--~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~~~~---~-~~~~~ 269 (339)
T cd08249 197 LGADAVFDYHDPD--VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEETEPR---K-GVKVK 269 (339)
T ss_pred cCCCEEEECCCch--HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccccCC---C-CceEE
Confidence 9999999887654 77778777767899999999986788999999999 8 9999998765322000 0 00111
Q ss_pred EEEeeeecC---C---CCCCChHHHHHHHHcCCCCCCCceeeeec--cccHHHHHHHHHcCC-c-eeEEEec
Q 016933 317 TLKGTFFGN---Y---KPRTDLPSVVDMYMNKQLELEKFITHRIP--FSEINKAFEYMVKGE-G-LRCIISM 378 (380)
Q Consensus 317 ~i~g~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~a~~~l~~~~-~-~Kvvi~~ 378 (380)
.+....... . .....+.+++++++++++.+.+ ...++ ++++++|++.+..++ . +|+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 270 FVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 111111110 0 1112466788889999877653 34556 999999999999888 6 6999875
No 96
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.2e-35 Score=276.35 Aligned_cols=312 Identities=19% Similarity=0.241 Sum_probs=241.7
Q ss_pred hhhhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC-CCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++..+++ ++++++.++|.|+++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 78999988886 5999999999999999999999999999999988776432 345789999999999999 457899
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|++.... . |. ...|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~---------------------~---g~-------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGYD---------------------L---GM-------------------NTDGGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEcccc---------------------c---CC-------------------CCCceeEEEEEEchhhEEECCCC
Confidence 99999864200 0 11 01368999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhcc--CCC-CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 016933 168 APLDKVCILSCGVSTGLGATLNVA--KPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~--~~~-~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~ 243 (380)
+++++++.+++.+.++|.++.... ++. .+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|+++
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999999875443 335 4579999998 9999999999999999 7999999999999999999999
Q ss_pred EecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeee
Q 016933 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 322 (380)
Q Consensus 244 vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 322 (380)
+++.++. .....+....+++|+++|++|+ ..+..++++++++ |+++.+|....... ......+ .+++++.+..
T Consensus 195 ~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~ 268 (325)
T cd05280 195 VLDREDL---LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGPEL-TTTVLPFILRGVSLLGID 268 (325)
T ss_pred EEcchhH---HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCCcc-ccccchheeeeeEEEEEE
Confidence 8876542 1122222333479999999998 6889999999997 99999987643221 2233333 4788888876
Q ss_pred ecCCCCCCCh----HHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 323 FGNYKPRTDL----PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 323 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
...... +.. +.+.+++..+. .+.+...|++++++++++.+.+++. +|+|+++
T Consensus 269 ~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 269 SVNCPM-ELRKQVWQKLATEWKPDL---LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eecCch-hHHHHHHHHHHHHHhcCC---ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 543211 122 33333444442 2236789999999999999988877 6998864
No 97
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.2e-35 Score=272.17 Aligned_cols=297 Identities=25% Similarity=0.313 Sum_probs=239.7
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
|||+++.+.+ | +++++.++|.++++||+||+.++++|+.|..+... ...|.++|||++|+|+++|+++..|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCC
Confidence 5788887654 4 77778889999999999999999999999887652 223678999999999999999999999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
||+|+... ..|+|++|+.++.+.++++|+++
T Consensus 76 Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~~~ 106 (305)
T cd08270 76 GARVVGLG-------------------------------------------------AMGAWAELVAVPTGWLAVLPDGV 106 (305)
T ss_pred CCEEEEec-------------------------------------------------CCcceeeEEEEchHHeEECCCCC
Confidence 99998531 12589999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
++++++++++.+.+||+++.+.... +|++++|+|+ |.+|++++++|+..|+ +|+.+++++++.+.++++|++.+++.
T Consensus 107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999999999999999997655544 5999999998 9999999999999999 89999899999999999998766543
Q ss_pred CCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccc---cccEEEeeeec
Q 016933 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL---NERTLKGTFFG 324 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~---~~~~i~g~~~~ 324 (380)
.. ++.++++|+++|++|+ ..+..++++++.+ |+++.+|... ..........+. ++.++.++.+.
T Consensus 185 ~~----------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 185 GS----------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred cc----------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence 22 1122479999999998 5789999999997 9999998764 222222222222 47788877654
Q ss_pred C-CCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 325 N-YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 325 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
. ....+.+..++++++++++.+. +.+.++++++++|++.+.+++. +|+|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 252 DGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred CHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 2 1112357888899999988754 6788999999999999988776 6999864
No 98
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=4.9e-35 Score=272.05 Aligned_cols=298 Identities=21% Similarity=0.323 Sum_probs=247.5
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCCCCCEEEecCccCCC
Q 016933 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECG 101 (380)
Q Consensus 23 ~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~ 101 (380)
+++++.+.|.+.+++|+||+.++++|+.|..++.+... ...+|.++|||++|+|+.+|++++.+++||+|++.+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 66778888889999999999999999999988876543 2346789999999999999999999999999985420
Q ss_pred CCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccchhhcchhhh
Q 016933 102 DCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 181 (380)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ 181 (380)
.|+|++|+.++...++++|+++++.+++.+++.+.
T Consensus 90 ---------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 15899999999999999999999999999999999
Q ss_pred hhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHH
Q 016933 182 TGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 260 (380)
Q Consensus 182 ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~ 260 (380)
+||+++.....+.+|++|||+|+ |.+|++++++|+++|+ +++++.+++++.+.++++|++.++++++.+ +.+.+.+
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHH
Confidence 99999877778899999999987 9999999999999999 788888999999999999999999876644 7777888
Q ss_pred HhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccc-cccEEEeeeecCCCC-------CCC
Q 016933 261 MTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP-------RTD 331 (380)
Q Consensus 261 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~ 331 (380)
.+++ ++|+++|++|+ ......+++++++ |+++.+|..... ...+....+. ++.++.+.....+.. .+.
T Consensus 202 ~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05282 202 ATGGAGARLALDAVGG-ESATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET 278 (323)
T ss_pred HhcCCCceEEEECCCC-HHHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence 8776 89999999998 5567889999997 999999876533 2233333344 788888876554321 124
Q ss_pred hHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 332 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
+.++++++.++++.+. .++.|+++++++|++.+.+++. +|++++
T Consensus 279 ~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 279 FAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 7778888889877643 5788999999999999988766 588864
No 99
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.3e-34 Score=267.82 Aligned_cols=301 Identities=25% Similarity=0.353 Sum_probs=240.9
Q ss_pred cCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccchhh-ccCCCC--CCCCccccccccEEEEEeCCCCCCCCCCCEEEe
Q 016933 18 EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP 94 (380)
Q Consensus 18 ~~~~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~-~g~~~~--~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~ 94 (380)
+.++ ++++++++|++.++||+||+.++++|++|+..+ .+.... ...|.++|+|++|+|+++|++++.+++||+|+.
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4444 999999999999999999999999999999887 554321 224789999999999999999999999999985
Q ss_pred cCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccchh
Q 016933 95 VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC 174 (380)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa 174 (380)
.. .|+|++|+.++.+.++++|+++ ..++
T Consensus 82 ~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~ 109 (312)
T cd08269 82 LS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQA 109 (312)
T ss_pred ec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhhH
Confidence 41 2589999999999999999998 2333
Q ss_pred hcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccH
Q 016933 175 ILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI 254 (380)
Q Consensus 175 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~ 254 (380)
.+..+++++++++. .+.+++++++||+|+|.+|++++++|+.+|+++|+++.+++++.++++++|++.+++.+..+ +
T Consensus 110 ~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~ 186 (312)
T cd08269 110 FPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--I 186 (312)
T ss_pred HhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcC--H
Confidence 22367889998864 78899999999998899999999999999994499998999999999999998888765544 7
Q ss_pred HHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeecCC-CCCCC
Q 016933 255 QEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNY-KPRTD 331 (380)
Q Consensus 255 ~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~-~~~~~ 331 (380)
.+.+.+++++ ++|+++|++|.......++++++++ |+++.+|... .....+... ...+++.+.++..... ...+.
T Consensus 187 ~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (312)
T cd08269 187 VERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEG 264 (312)
T ss_pred HHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhH
Confidence 7888887776 8999999998867889999999997 9999998654 222222221 2336666666543221 11246
Q ss_pred hHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEE
Q 016933 332 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCII 376 (380)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~--~Kvvi 376 (380)
+++++++++++++.+...+.+.|+++++++|++.+.+++. +|+++
T Consensus 265 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 265 MREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 8889999999987754446788999999999999988865 68876
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.1e-35 Score=271.98 Aligned_cols=311 Identities=24% Similarity=0.378 Sum_probs=247.0
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
||++++.+.+.+ +++.+.+.|.+.++||+||+.++++|+.|+....+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 577777666543 66777788888999999999999999999998887655556688999999999999995 57999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
||+|+...... |. ...|+|++|+.++...++++|+++
T Consensus 79 Gd~V~~~~~~~------------------------~~-------------------~~~g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGGM------------------------GR-------------------TFDGSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCCC------------------------CC-------------------CCCcccceEEEcCHHHcEeCCCCC
Confidence 99998652100 00 012589999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
++++++.+++++.+||+++.+...+++|++|||+|+ |.+|++++|+|+.+|+ +|+++.+++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999999877788999999999997 9999999999999999 79999899999999999999888754
Q ss_pred CCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceee----ccccccccccEEEeeee
Q 016933 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM----TKPINVLNERTLKGTFF 323 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~----~~~~~~~~~~~i~g~~~ 323 (380)
..+ +.+.+.+. ++++|+++|++|+ ..+..++++++++ |+++.+|......... .....+.+++++.++..
T Consensus 195 -~~~--~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 195 -DGA--IAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred -Ccc--HHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 322 66777777 5589999999998 7889999999997 9999999753221111 11111235666666543
Q ss_pred cCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 324 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
... ....+.+++++++++.+.+. .++.++++++++|++.+.+++. +|+++
T Consensus 269 ~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 269 GDV-PQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhh-hHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 221 12347788889999977543 5678999999999999988776 58775
No 101
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.6e-34 Score=270.25 Aligned_cols=312 Identities=19% Similarity=0.196 Sum_probs=249.1
Q ss_pred hhhhhhccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCC
Q 016933 11 CKAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD 85 (380)
Q Consensus 11 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~ 85 (380)
|||+++++++.+ ++.++++.|.+.+++|+|++.++++|+.|+..+.+..+....|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 578888887764 566677888889999999999999999999887775544456778999999999999999999
Q ss_pred CCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCC
Q 016933 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (380)
Q Consensus 86 ~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 165 (380)
|++||+|+.... . ...|+|++|+.++...++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~------------------~~~g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGD----------------------------I------------------TRPGSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCC----------------------------C------------------CCCccceEEEEEchHHeeeCC
Confidence 999999985410 0 012589999999999999999
Q ss_pred CCCCccchhhcchhhhhhhhhhhhccCCCC-----CCeEEEEcC-CHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh
Q 016933 166 PLAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~G~-g~~G~~ai~la~~~g-~~~vi~~~~~~~~~~~~~~ 238 (380)
+++++++++.+++.+.+||+++.+.+.+++ |++|+|+|+ |.+|++++++|+.+| + +|+++++++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999999877788877 999999986 999999999999999 7 89999999999999999
Q ss_pred cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccE
Q 016933 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERT 317 (380)
Q Consensus 239 lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~ 317 (380)
+|++++++.++ + +.+.++....+++|+++|++|....+..++++++++ |+++.+|... . ..+...+ .++.+
T Consensus 194 ~g~~~~~~~~~-~--~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~--~~~~~~~~~~~~~ 265 (336)
T cd08252 194 LGADHVINHHQ-D--LAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--E--PLDLGPLKSKSAS 265 (336)
T ss_pred cCCcEEEeCCc-c--HHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--C--cccchhhhcccce
Confidence 99999988764 2 656666543348999999999767889999999997 9999998652 1 2222233 46777
Q ss_pred EEeeeecCCC--C-------CCChHHHHHHHHcCCCCCCCc-eeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 318 LKGTFFGNYK--P-------RTDLPSVVDMYMNKQLELEKF-ITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 318 i~g~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
+.+..+.... . ...+.++++++.++.+.+... ..+.++++++++|++.+.+++. +|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 7765543211 1 123677889999997764321 1245799999999999988876 588764
No 102
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.3e-34 Score=269.67 Aligned_cols=314 Identities=19% Similarity=0.208 Sum_probs=239.0
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCC-CCCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~-~~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++.+.+.+ +++++.+.|.|.++||+||+.++++|++|.....+.+ ....+|.++|||++|+|+++| +.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 789999877764 7889999999999999999999999999987654322 123458899999999999964 57799
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|+..... .|. ...|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~-------------------~~~g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGV-------------------SHHGGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCC-------------------CCCCcceeEEEEcHHHeEECCCC
Confidence 99999865310 011 01368999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhc--cC-CCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 016933 168 APLDKVCILSCGVSTGLGATLNV--AK-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~--~~-~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~ 243 (380)
+++++++.+++.+.|||.++... .. ...+++|||+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999999886432 23 345789999998 9999999999999999 8999999999999999999988
Q ss_pred EecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeee
Q 016933 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 322 (380)
Q Consensus 244 vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 322 (380)
+++.++. ..+.+++..++++|+++|++|+ ..+..++++++++ |+++.+|.... ...+.....+ .+++++.+..
T Consensus 195 v~~~~~~---~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 195 VIPREEL---QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred EEcchhH---HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEE
Confidence 8886543 2344555544489999999998 7889999999997 99999997642 2222222223 5788888875
Q ss_pred ecCCCCCCChHHHHHHHHcCCCC---CCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 323 FGNYKPRTDLPSVVDMYMNKQLE---LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
..... .....++++.+.. .+. ....+.+.|+++++.+||+.+.+++. +|+++++
T Consensus 269 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 269 SVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred eEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 32210 1123334443332 222 22235789999999999999988877 5998864
No 103
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=3e-34 Score=266.87 Aligned_cols=310 Identities=20% Similarity=0.245 Sum_probs=239.4
Q ss_pred hhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC-CCCCccccccccEEEEEeCCCCCCCCC
Q 016933 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 12 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
||+++...+.| ++++++|+|.+.++||+||+.++++|++|+....|.... ...|.++|||++|+|+. +++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 56777666664 689999999999999999999999999999888775432 34588999999999988 55678999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
||+|++..... |. ...|+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~~------------------------~~-------------------~~~g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYGL------------------------GV-------------------SHDGGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCCC------------------------CC-------------------CCCccceEEEEEchhheEECCCCC
Confidence 99998652100 10 013589999999999999999999
Q ss_pred Cccchhhcchhhhhhhhhhhh--ccCCCCCC-eEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE
Q 016933 169 PLDKVCILSCGVSTGLGATLN--VAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~-~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v 244 (380)
++++++.+++.+.+|+.++.. .+.+.+++ +|+|+|+ |.+|++++++|+++|+ +++++..++++.+.++++|++.+
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 999999999999999887643 34488898 9999997 9999999999999999 78877788888899999999888
Q ss_pred ecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeeee
Q 016933 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF 323 (380)
Q Consensus 245 i~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 323 (380)
++.++.+ ..++.+..+++|+++|++|+ ..+..++++++++ |+++.+|.... .........+ .++.++.+...
T Consensus 195 ~~~~~~~----~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 195 IDREDLS----PPGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred EccccHH----HHHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEec
Confidence 8765432 24455555579999999998 5788999999997 99999997642 2222222223 57888887654
Q ss_pred cCCCCCC----ChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 324 GNYKPRT----DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 324 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
... ..+ .+..+.+++..+.+.. +.+.|+++++++||+.+.+++. +|+++++
T Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 268 VYC-PMALREAAWQRLATDLKPRNLES---ITREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred ccc-CchhHHHHHHHHHHHhhcCCCcC---ceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 321 112 2344555666665532 2568999999999999998877 5998863
No 104
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.2e-34 Score=272.49 Aligned_cols=311 Identities=23% Similarity=0.334 Sum_probs=239.5
Q ss_pred hhhhhhccCCCC---eEEEEeecCCC-CCCeEEEEEeeeecCcccchhhccCCC---------------CCCCCcccccc
Q 016933 11 CKAAVAWEAGKP---LIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ---------------TPLFPRIFGHE 71 (380)
Q Consensus 11 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~---------------~~~~p~v~G~e 71 (380)
|||+++++++++ ++++++++|.| +++||+||++++++|++|+....|... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 788888888876 89999999999 499999999999999999998876421 23568899999
Q ss_pred ccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCccee
Q 016933 72 AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFS 151 (380)
Q Consensus 72 ~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a 151 (380)
++|+|+++|+++++|++||||++.+.. +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999864211 1136899
Q ss_pred eEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhccCCC----CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEE
Q 016933 152 EYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE----RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 226 (380)
Q Consensus 152 ~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~----~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~ 226 (380)
+|+.++.+.++++|++++++.++.+++.+.+||+++.+.+.+. +|++++|+|+ |.+|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 9999999999999999999999999999999999977767665 4999999996 9999999999999999 78777
Q ss_pred cCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCce--
Q 016933 227 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-- 304 (380)
Q Consensus 227 ~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-- 304 (380)
.++ ++.+.++++|++.+++..+.+ +.+.+... +++|++||++|+ .....++++++++ |+++.+|.......
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~--~~vd~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 266 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNNED--FEEELTER--GKFDVILDTVGG-DTEKWALKLLKKG-GTYVTLVSPLLKNTDK 266 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCChh--HHHHHHhc--CCCCEEEECCCh-HHHHHHHHHhccC-CEEEEecCCccccccc
Confidence 654 678888999998888876543 54544432 479999999998 4888999999997 99999986532111
Q ss_pred eec--c----ccccc-cccE-E-Eee---eecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-
Q 016933 305 FMT--K----PINVL-NERT-L-KGT---FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG- 371 (380)
Q Consensus 305 ~~~--~----~~~~~-~~~~-i-~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~- 371 (380)
... . ...+. ..+. + ... +.........+.++++++.++.+.+ .+++.|+++++.++++.+.+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~ 344 (350)
T cd08248 267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHAR 344 (350)
T ss_pred ccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCc
Confidence 011 0 00111 0000 0 000 0000112245888999999997653 36788999999999999988776
Q ss_pred eeEEEe
Q 016933 372 LRCIIS 377 (380)
Q Consensus 372 ~Kvvi~ 377 (380)
.|++++
T Consensus 345 ~~vv~~ 350 (350)
T cd08248 345 GKTVIK 350 (350)
T ss_pred eEEEeC
Confidence 588763
No 105
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.5e-33 Score=262.18 Aligned_cols=312 Identities=17% Similarity=0.207 Sum_probs=242.8
Q ss_pred hhhhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++.++|. .+++++.+.|+|+++||+||+.++++|++|.....|... ...+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999988775 388999999999999999999999999999988777542 234578899999999999 6778899
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|++.... . | ....|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~--------------~----------~-------------------~~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG--------------V----------G-------------------ERHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc--------------C----------C-------------------CCCCCcceeEEEEchHHeeeCCCC
Confidence 99999864100 0 0 001358999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhh--hccCCC-CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 016933 168 APLDKVCILSCGVSTGLGATL--NVAKPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~--~~~~~~-~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~ 243 (380)
+++++++.+++.+.+++.++. +..... +++++||+|+ |.+|++++|+|+.+|+ +|+++..++++.++++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999999999987743 123444 6789999997 9999999999999999 7888889999999999999999
Q ss_pred EecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeee
Q 016933 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 322 (380)
Q Consensus 244 vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 322 (380)
++++++. ...++.+..+++|.++|++++ ..+...+..++.+ |+++.+|.... .........+ .++.++.+..
T Consensus 195 ~~~~~~~----~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 195 IIDRAEL----SEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred EEEcchh----hHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEE
Confidence 9987653 234555555578999999997 5677888899996 99999987532 1112222233 5788888865
Q ss_pred ecCCCC---CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 323 FGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 323 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
...... .+.+..+.+++.++.+.+ +.+.++++++++|++.+.+++. +|+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 268 SVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred eecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 432221 123555666777776643 3689999999999999988877 5998864
No 106
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.4e-33 Score=265.48 Aligned_cols=317 Identities=20% Similarity=0.275 Sum_probs=235.7
Q ss_pred hhhhhccCCCCeEEEEeecCCC---CCCeEEEEEeeeecCcccchhhccCCCCCC-CCccccccccEEEEEeCCCCC-CC
Q 016933 12 KAAVAWEAGKPLIIQDVEVAPP---QAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVS-DL 86 (380)
Q Consensus 12 ~a~~~~~~~~~~~~~~~~~p~~---~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~-~p~v~G~e~vG~V~~vG~~v~-~~ 86 (380)
|++++.+.++++++++++.|.| +++||+||+.++++|++|+....+...... .|.++|+|++|+|+++|++++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6888888888888888888776 899999999999999999887654222222 377899999999999999998 89
Q ss_pred CCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEecc----ceE
Q 016933 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG----CVA 162 (380)
Q Consensus 87 ~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~----~~~ 162 (380)
++||+|++.....| .+.|+|++|+.++.. .++
T Consensus 82 ~~Gd~V~~~~~~~~--------------------------------------------~~~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPY--------------------------------------------GGQGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCC--------------------------------------------CCCceeeEEEEEccccccceeE
Confidence 99999986532111 013689999999987 799
Q ss_pred eCCCCCCccchhhcchhhhhhhhhhhhcc-CCCCCCeEEEEcC-CHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhc
Q 016933 163 KINPLAPLDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF 239 (380)
Q Consensus 163 ~~p~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~G~-g~~G~~ai~la~~~g~-~~vi~~~~~~~~~~~~~~l 239 (380)
++|+++++++++.+++.+.|||+++.+.. .+++|++++|+|+ |.+|++++++|+.+|. ++++++. ++++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999976666 7999999999998 8999999999998854 3677774 45556688899
Q ss_pred CCceEecCCCCCc--cHHHHHHHHh-CCCccEEEEcccChhhHHHHHHHhh---cCCcEEEEEcCCCCCcee--e-----
Q 016933 240 GVTDFVNTSEHDR--PIQEVIAEMT-NGGVDRSVECTGNIDNMISAFECVH---DGWGVAVLVGVPSKDAVF--M----- 306 (380)
Q Consensus 240 G~~~vi~~~~~~~--~~~~~~~~~~-~~~~d~v~d~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~~~--~----- 306 (380)
|++.+++.++.+. .+.+.++..+ ++++|++||++|+......++++++ ++ |+++.++........ .
T Consensus 197 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~ 275 (352)
T cd08247 197 GADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWD 275 (352)
T ss_pred CCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhcc
Confidence 9999888765431 1333334444 3489999999998667888999999 97 999976432211100 0
Q ss_pred ---cccccccccc-----EEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 307 ---TKPINVLNER-----TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 307 ---~~~~~~~~~~-----~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
.....+.+.. .+..... ....+.+.++++++.++.+.+ .+++.++++++++|++.+.+++. +|++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 276 NPSANARKLFGSLGLWSYNYQFFLL--DPNADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred ccchhhhhhhhhhcCCCcceEEEEe--cCCHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 0001111121 2221110 011134677888998987653 36788999999999999988776 699886
Q ss_pred c
Q 016933 378 M 378 (380)
Q Consensus 378 ~ 378 (380)
+
T Consensus 352 ~ 352 (352)
T cd08247 352 V 352 (352)
T ss_pred C
Confidence 4
No 107
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=8.3e-34 Score=264.56 Aligned_cols=305 Identities=19% Similarity=0.246 Sum_probs=239.9
Q ss_pred hhhhhhccCCC------CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC---CCCCccccccccEEEEEeCC
Q 016933 11 CKAAVAWEAGK------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGE 81 (380)
Q Consensus 11 ~~a~~~~~~~~------~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~---~~~p~v~G~e~vG~V~~vG~ 81 (380)
.|||++.+.++ .+++++++.|++.+++|+||+.++++|+.|.....+.... ...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 35666644332 2889999999999999999999999999887655543211 12356789999999999996
Q ss_pred CCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEec-cc
Q 016933 82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GC 160 (380)
Q Consensus 82 ~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~-~~ 160 (380)
+ +|++||||+.. ++|++|+.++. +.
T Consensus 82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~ 107 (329)
T cd05288 82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG 107 (329)
T ss_pred C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence 4 79999999843 37999999999 99
Q ss_pred eEeCCCCCC--ccchhh-cchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 016933 161 VAKINPLAP--LDKVCI-LSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 236 (380)
Q Consensus 161 ~~~~p~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~ 236 (380)
++++|++++ +.++++ +++++.+||+++.+...+.++++|||+|+ |.+|++++|+|+..|+ +|+++++++++.+.+
T Consensus 108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~ 186 (329)
T cd05288 108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL 186 (329)
T ss_pred cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999999985 445555 88899999999877788999999999996 9999999999999999 899998999999999
Q ss_pred Hh-cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceee-----cccc
Q 016933 237 KK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM-----TKPI 310 (380)
Q Consensus 237 ~~-lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-----~~~~ 310 (380)
++ +|++.++++++.+ +.+.+.+..++++|++||++|+ ..+..++++++++ |+++.+|......... ....
T Consensus 187 ~~~~g~~~~~~~~~~~--~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 262 (329)
T cd05288 187 VEELGFDAAINYKTPD--LAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN 262 (329)
T ss_pred HhhcCCceEEecCChh--HHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence 88 9999998887654 7777777765689999999998 7888999999997 9999998654322111 1122
Q ss_pred ccccccEEEeeeecCCCC--CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 311 NVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 311 ~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
.+.++.++.++....... .+.+.++++++.++.+.+.+ ...++++++.++++.+.+++. +|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 345778888766433211 13467788899999877653 355899999999999987766 57764
No 108
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=4.3e-33 Score=258.56 Aligned_cols=315 Identities=27% Similarity=0.362 Sum_probs=250.7
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
||++++..++.+ +.+.+.+.|.+.+++|+|++.++++|++|+....|... ....|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 578887766544 77888898999999999999999999999988776543 345788999999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|+..... .. ...|++++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~~--------------------------~~------------------~~~g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLG--------------------------WG------------------RRQGTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEeccc--------------------------cC------------------CCCcceeeEEEecHHHcEeCCCC
Confidence 99999865310 00 01358999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
+++.+++.+++++.+||+++.....+.+|++++|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877788999999999996 9999999999999999 8999989999999999999988887
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeeeec
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG 324 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 324 (380)
....+ +.+.+.+...+ ++|+++|++|+ ......+++++++ |+++.++...... ...... +.++.++.+...+
T Consensus 196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08253 196 YRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSGGLRG--TIPINPLMAKEASIRGVLLY 269 (325)
T ss_pred CCCcC--HHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeecCCcC--CCChhHHHhcCceEEeeehh
Confidence 76554 66777777665 89999999998 5678889999997 9999998754111 222222 3456666665433
Q ss_pred CCCCC---CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 325 NYKPR---TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 325 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
..... +.+..+.+++.++.+.+ ..++.|++++++++++.+.+++. +|+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 270 TATPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 22111 12455566777776543 35688999999999999988766 6988864
No 109
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=4.9e-33 Score=257.83 Aligned_cols=309 Identities=26% Similarity=0.346 Sum_probs=249.9
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++.+.+.+ +++++.+.|.+.++||+||+.++++|+.|+....+..+ ....|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 688888775554 77778888888999999999999999999988776543 234678999999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|+.... .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALLA-------------------------------------------------GGGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEecC-------------------------------------------------CCceeEEEEcCHHHhccCCCC
Confidence 9999985310 158999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
+++.+++.++..+.++|+++.+...+.++++++|+|+ |.+|++++++++..|+ +++++++++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877788999999999997 9999999999999999 7999989999999999999988887
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeeeec
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 324 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 324 (380)
....+ +.+.+.+...+ ++|+++|++|+ ..+...++++.++ |+++.+|...... .......+ .+++++.++...
T Consensus 191 ~~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 191 YRTED--FAEEVKEATGGRGVDVILDMVGG-DYLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCchh--HHHHHHHHhCCCCeEEEEECCch-HHHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeecc
Confidence 76544 66777776665 89999999998 5578899999997 9999998754221 22222223 478888887654
Q ss_pred CCCCC-------CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 325 NYKPR-------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 325 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
..... +.+.++++++.++++.+ +.++.|++++++++++.+.+++. +|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 266 SRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred chhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 32111 12456778888887654 36788999999999999987765 57763
No 110
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=6.8e-33 Score=256.55 Aligned_cols=309 Identities=25% Similarity=0.319 Sum_probs=247.2
Q ss_pred hhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 12 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
||+....++.+ +.+.+.+.|.++++||+|++.++++|+.|+....+..+. .+|.++|||++|+|+.+|+++.+|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 35555444443 666777777788999999999999999999888775433 457789999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
|+|++.. ..|+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------------------------PPGAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------------------------CCCceeEEEEecHHHceeCCCCCC
Confidence 9998541 025899999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~ 248 (380)
..+++.+++.+.++|+++.+...+++|++|||+|+ |.+|++++++|+.+|+ +|++++.++++.+.++++|++.+++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999999999999999877888999999999996 9999999999999999 899998999999999999998888766
Q ss_pred CCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeeeecCC
Q 016933 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY 326 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 326 (380)
..+ +.+.++..+.+ ++|+++|++++ .....++++++++ |+++.+|..... ...+....+ .+++++.+......
T Consensus 190 ~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T cd05286 190 DED--FVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHY 264 (320)
T ss_pred chh--HHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhh
Confidence 544 77778877766 89999999998 6888999999997 999999875422 112222223 46667665433222
Q ss_pred CCC-----CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 327 KPR-----TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 327 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
... +.+.++++++.++.+.+. .++.|++++++++++.+.+++. +|+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 265 IATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 111 224567888888876643 5678999999999999988776 5888753
No 111
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=5.1e-33 Score=251.60 Aligned_cols=268 Identities=32% Similarity=0.504 Sum_probs=220.3
Q ss_pred eEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCc
Q 016933 37 EVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 115 (380)
Q Consensus 37 eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~ 115 (380)
||+|++.++++|+.|+....+..+ ....|.++|+|++|+|+++|++++.|++||+|+..+...|++|.+|+. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999887654 345688999999999999999999999999999999999999999997 676
Q ss_pred ccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCC
Q 016933 116 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 195 (380)
Q Consensus 116 ~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 195 (380)
..... +. ...|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+++
T Consensus 77 ~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGIL---GE-------------------GLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCEe---cc-------------------ccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 55443 21 123689999999999999999999999999999999999999877777799
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCC-CccEEEEccc
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 274 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g 274 (380)
+++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|++.+++..+.+ +.+.+. ...+ ++|+++|+++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCC
Confidence 9999999985599999999999998 899999999999999999998888776654 555555 4444 8999999999
Q ss_pred ChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCCCCChHHHHHH
Q 016933 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 338 (380)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 338 (380)
.......++++++++ |+++.++..............+.+++++.++..+.+ .++++++++
T Consensus 211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 866788999999997 999999876533322222233458889988875432 345555544
No 112
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.6e-33 Score=257.90 Aligned_cols=305 Identities=22% Similarity=0.309 Sum_probs=237.9
Q ss_pred hhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC-CCCCccccccccEEEEEeCCCCCCCCC
Q 016933 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 12 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
||+++...+.+ +++++.+.|.|.++||+|++.++++|++|+.++.+..+. ..+|.++|||++|+|+.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 67777776654 888888999999999999999999999999988776532 356889999999999999999999999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
||+|+.... .|+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALTR-------------------------------------------------VGGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeCC-------------------------------------------------CcceeeEEEechHHeEECCCCC
Confidence 999985420 1589999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
++++++.+++++.+||+++.+...+.+|++++|+|+ |.+|++++++|+..|+ +|+++.. +++.++++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999999877788999999999997 9999999999999999 8888877 88899999999754 444
Q ss_pred CCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecc---------------cccc
Q 016933 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---------------PINV 312 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~---------------~~~~ 312 (380)
+..+ +.+. ....+++|+++|++|+. ....++++++++ |+++.+|........... ...+
T Consensus 190 ~~~~--~~~~--~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd08273 190 RTKD--WLPA--MLTPGGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPT 263 (331)
T ss_pred CCcc--hhhh--hccCCCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceec
Confidence 4333 3333 23345899999999984 588999999997 999999876432221111 0001
Q ss_pred ccccEEEeeeecCC----CCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 313 LNERTLKGTFFGNY----KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 313 ~~~~~i~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
.+..++........ ...+.+.+++++++++.+.. .+.+.+++++++++++.+.+++. +|+|+
T Consensus 264 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 264 GRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred cceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 12222222221100 01135778889999997754 36788999999999999887766 57775
No 113
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-32 Score=255.91 Aligned_cols=312 Identities=24% Similarity=0.331 Sum_probs=245.2
Q ss_pred hhhhhhccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCC
Q 016933 11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (380)
Q Consensus 11 ~~a~~~~~~~--~~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~ 88 (380)
|||+++.+++ +.+++++.+.|++.+++|+||+.++++|+.|+....+.......|.++|||++|+|+.+|+++..+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7899998888 35999999999999999999999999999998887665433334778999999999999999999999
Q ss_pred CCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCC
Q 016933 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (380)
Q Consensus 89 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 168 (380)
||+|++.... ...|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~----------------------------------------------~~~~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASL----------------------------------------------ARGGSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCC----------------------------------------------CCCccceeEEEeCHHHeEECCCCC
Confidence 9999864210 012589999999999999999999
Q ss_pred CccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 169 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
+..+++.+.+.+.+|++++.+.+.+++|++++|+|+ |.+|++++++|+..|+ +|+++. ++++.+.++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999999877888999999999998 8999999999999999 777775 6778888899999888877
Q ss_pred CCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc---ccccccEEEeeee
Q 016933 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI---NVLNERTLKGTFF 323 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~---~~~~~~~i~g~~~ 323 (380)
...+ +.+.+++...+ ++|++++++++ .....+++++++. |+++.++...... ....+ ...+++.+.....
T Consensus 193 ~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T cd08271 193 NDED--VCERIKEITGGRGVDAVLDTVGG-ETAAALAPTLAFN-GHLVCIQGRPDAS--PDPPFTRALSVHEVALGAAHD 266 (325)
T ss_pred CCcc--HHHHHHHHcCCCCCcEEEECCCc-HhHHHHHHhhccC-CEEEEEcCCCCCc--chhHHhhcceEEEEEeccccc
Confidence 6654 66777777665 89999999998 4566789999997 9999887553221 11111 1112333333221
Q ss_pred cCC-----CCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 324 GNY-----KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 324 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
... ...+.+.++++++.++.+.+. .++.|+++++.++++.+.+++. +|+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 267 HGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 111 011235678888888876543 4688999999999999987766 5988764
No 114
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.6e-32 Score=253.70 Aligned_cols=311 Identities=25% Similarity=0.330 Sum_probs=248.1
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+++..++.+ +++++.+.|.+.+++|+|++.++++|++|+.+..+... ....|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 688999877765 77888888888999999999999999999988766543 233578899999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|+.... |+. ...|+|++|+.++.+.++++|+.
T Consensus 81 ~Gd~V~~~~~--------------------------~~~------------------~~~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLG------------------GLQGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcC------------------CCCCceeEEEEecHHHcccCCCC
Confidence 9999985421 100 01368999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
+++..++.+++.+.+||+++.+...++++++++|+|+ |.+|++++++|+..|+ +|+++.++ ++.++++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999999999999878889999999999986 9999999999999999 78888787 8999999999988877
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecC
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 325 (380)
.... +.+.+.+.+.+ ++|+++|++|+ .....++++++++ |+++.++... .. ..... ..+++++.+.....
T Consensus 195 ~~~~---~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~-~~--~~~~~-~~~~~~~~~~~~~~ 265 (326)
T cd08272 195 YRET---VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA-TH--DLAPL-SFRNATYSGVFTLL 265 (326)
T ss_pred cchh---HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC-cc--chhhH-hhhcceEEEEEccc
Confidence 5442 66677777766 89999999998 5788899999997 9999988653 11 11111 24566666655321
Q ss_pred --C---C---CCCChHHHHHHHHcCCCCCCCcee-eeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 326 --Y---K---PRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 326 --~---~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
. . ..+.+.++++++.++.+.. .++ +.|+++++.++++.+.+++. +|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 0 0 1124667888888887653 234 88999999999999987766 6998864
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.5e-32 Score=250.32 Aligned_cols=316 Identities=27% Similarity=0.376 Sum_probs=248.2
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|||+.+.+.+.+ +++.+.+.|.+.+++++|++.++++|+.|+.+..+... ....|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 577777665543 67778888888999999999999999999988766543 234578899999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|+..+... ....|++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAAD--------------------------------------------LGQYGTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEeccccc--------------------------------------------cCCCccceEEEEechHhcEeCCCC
Confidence 999998653210 001358999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
+++.+++.+++.+.++|.++.....+.++++++|+|+ |.+|++++++++..|+ +++.+++++++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877888999999999997 9999999999999999 8888889999999999999988887
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccc-ccccccEEEeeeec
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFG 324 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~ 324 (380)
.+..+ +.+.+.....+ ++|++++++|+ .....++++++++ |+++.+|.... ........ .+.++.++.+..+.
T Consensus 196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 196 TDEED--LVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred cCCcc--HHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecc
Confidence 76544 66777777665 89999999998 6788899999997 99999986542 11122222 24577777776543
Q ss_pred CCCC-CC----ChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 325 NYKP-RT----DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 325 ~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
.... .. .+..+.+++.++.+... .++.|+++++.++++.+.+++. +|++++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 271 EITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 2110 11 23444455666665543 5678999999999999988766 5888763
No 116
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=9.5e-32 Score=247.30 Aligned_cols=292 Identities=25% Similarity=0.372 Sum_probs=232.2
Q ss_pred cCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccC
Q 016933 30 VAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS 108 (380)
Q Consensus 30 ~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~ 108 (380)
.|.+.+++|+||+.++++|+.|+....+..+ ...+|.++|+|++|+|+++|+++++|++||+|+.....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 5778899999999999999999998877543 23568899999999999999999999999999864210
Q ss_pred CCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhh
Q 016933 109 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188 (380)
Q Consensus 109 ~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~ 188 (380)
..|+|++|+.++.+.++++|+++++++++.+++.+.+||.++
T Consensus 72 -------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 125899999999999999999999999999999999999986
Q ss_pred hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCC-Cc
Q 016933 189 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 266 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~-~~ 266 (380)
+...+++|++++|+|+ |.+|++++|+|+.+|+ +|+++.+++++.+.++++|++.+++....+ +.+.+++++++ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCc
Confidence 5788999999999976 9999999999999999 899998999999999999999998876654 77778887776 89
Q ss_pred cEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecC---CC---CCCChHHHHHHHH
Q 016933 267 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN---YK---PRTDLPSVVDMYM 340 (380)
Q Consensus 267 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~---~~~~~~~~~~~~~ 340 (380)
|+++|++++ ......+++++++ |+++.+|..............+.++..+....+.. .. ..+.+.++++++.
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE 268 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence 999999976 6788899999997 99999876532211122222222333332222111 00 1123667888888
Q ss_pred cCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 341 NKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 341 ~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
++.+.. +.++.|++++++++++.+.+++. +|+++
T Consensus 269 ~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 269 EGELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCCccC--CCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 887654 35788999999999999988766 47764
No 117
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=2e-31 Score=247.55 Aligned_cols=311 Identities=24% Similarity=0.313 Sum_probs=249.7
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCCC-CCCCccccccccEEEEEeCCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G~e~vG~V~~vG~~v~~~~ 87 (380)
|+|+.+...+.+ +++.+.+.|.+++++++|++.++++|+.|+....+.... ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 577777666655 666677777789999999999999999998887664432 33578999999999999999999999
Q ss_pred CCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCC
Q 016933 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (380)
Q Consensus 88 ~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 167 (380)
+||+|+... ..|+|++|+.++...++++|+.
T Consensus 81 ~Gd~V~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV-------------------------------------------------AGGGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc-------------------------------------------------CCCcceeEEEecHHHcEeCCCC
Confidence 999998531 0158999999999999999999
Q ss_pred CCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec
Q 016933 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (380)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~ 246 (380)
+++.+++.+++++.++|.++.+...++++++++|+|+ |.+|++++++++..|+ +|+++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998878889999999999996 9999999999999999 8888889999999999999988877
Q ss_pred CCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccccEEEeeeec
Q 016933 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 324 (380)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 324 (380)
....+ +.+.+....++ ++|+++|++|+ .....++++++++ |+++.+|....... ......+ .+++++.+....
T Consensus 191 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 191 YREED--FVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred cCchh--HHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehh
Confidence 65543 66777777665 89999999998 5788899999997 99999987542221 3333333 588888887654
Q ss_pred CCCCC-------CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 325 NYKPR-------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 325 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
..... ..+.+++++++++.+.+ +.++.+++++++++++.+.+++. +|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 266 ARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 32111 12355677888886653 36788999999999999987766 5888763
No 118
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.4e-31 Score=244.50 Aligned_cols=309 Identities=22% Similarity=0.333 Sum_probs=241.1
Q ss_pred hhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC-CCCCCccccccccEEEEEeCCCCCCCCCC
Q 016933 13 AAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (380)
Q Consensus 13 a~~~~~~~~--~~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~~~p~v~G~e~vG~V~~vG~~v~~~~~G 89 (380)
|+.+...+. .+.+.+.+.|.|.+++|+||+.++++|+.|...+.+... ....|.++|||++|+|+.+|+++.+|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G 81 (337)
T cd08275 2 AVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVG 81 (337)
T ss_pred eEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCC
Confidence 444444443 277778888888999999999999999999998877543 23457789999999999999999999999
Q ss_pred CEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCC
Q 016933 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (380)
Q Consensus 90 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 169 (380)
|+|+.... .|+|++|+.++.+.++++|+.++
T Consensus 82 ~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~~ 112 (337)
T cd08275 82 DRVMGLTR-------------------------------------------------FGGYAEVVNVPADQVFPLPDGMS 112 (337)
T ss_pred CEEEEecC-------------------------------------------------CCeeeeEEEecHHHeEECCCCCC
Confidence 99985410 14899999999999999999999
Q ss_pred ccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceEecC
Q 016933 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (380)
Q Consensus 170 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~-g~~~vi~~~~~~~~~~~~~~lG~~~vi~~ 247 (380)
+.+++.+++.+.++|+++.+...++++++|+|+|+ |.+|++++++|+.+ +. .++.. ..+++.+.++++|++.+++.
T Consensus 113 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~ 190 (337)
T cd08275 113 FEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDY 190 (337)
T ss_pred HHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeC
Confidence 99999999999999999877888999999999997 99999999999998 33 33222 34568888889999888887
Q ss_pred CCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCc--eee-------------cc-ccc
Q 016933 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA--VFM-------------TK-PIN 311 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~~-------------~~-~~~ 311 (380)
...+ +.+.++..+++++|+++|++|+ .....++++++++ |+++.+|...... ... .. ...
T Consensus 191 ~~~~--~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (337)
T cd08275 191 RTQD--YVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKL 266 (337)
T ss_pred CCCc--HHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHH
Confidence 6654 7777877776689999999998 5778899999997 9999998654211 111 00 112
Q ss_pred cccccEEEeeeecCCCCC-----CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 016933 312 VLNERTLKGTFFGNYKPR-----TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 378 (380)
Q Consensus 312 ~~~~~~i~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~ 378 (380)
+.++.++.++........ ..+.+++++++++.+.+. .++.|++++++++++.+.+++. +|+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 267 ISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred hhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 346777777654321111 125678888888876543 5788999999999999988766 5998864
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=2e-31 Score=245.72 Aligned_cols=302 Identities=23% Similarity=0.347 Sum_probs=238.4
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC---CCCCCccccccccEEEEEeCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD 85 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~---~~~~p~v~G~e~vG~V~~vG~~v~~ 85 (380)
|||+++..++.. +++++.+.|+++++||+|++.++++|+.|+....+... ....|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678888776654 56677778888999999999999999999988776442 3445889999999999999999999
Q ss_pred CCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCC
Q 016933 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (380)
Q Consensus 86 ~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 165 (380)
+++||+|+..... ...|+|++|+.++...++++|
T Consensus 81 ~~~G~~V~~~~~~----------------------------------------------~~~g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF----------------------------------------------TRGGAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC----------------------------------------------CCCCcceeEEEecHHHhccCC
Confidence 9999999865210 002589999999999999999
Q ss_pred CCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE
Q 016933 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (380)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v 244 (380)
+++++..++.+++.+.++|+++.+...+.++++++|+|+ |.+|++++++|+..|+ +|+++..++ +.+.++++|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999999999999777677999999999997 9999999999999999 788887777 8888899998888
Q ss_pred ecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeec
Q 016933 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 324 (380)
Q Consensus 245 i~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 324 (380)
++....+ +.+ ....+++|+++|++|+ .....++++++++ |+++.+|....... ..+.++.++....+.
T Consensus 193 ~~~~~~~--~~~---~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~ 260 (309)
T cd05289 193 IDYTKGD--FER---AAAPGGVDAVLDTVGG-ETLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVE 260 (309)
T ss_pred EeCCCCc--hhh---ccCCCCceEEEECCch-HHHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEec
Confidence 8766544 322 2222379999999998 5788999999997 99999987542111 222344555444331
Q ss_pred CCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 325 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
.. .+.+.+++++++++.+. +++++.|++++++++++.+.+++. +|+++
T Consensus 261 ~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 261 PD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 11 34688889999888654 336788999999999999987765 47663
No 120
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=8.1e-31 Score=243.07 Aligned_cols=309 Identities=28% Similarity=0.477 Sum_probs=247.2
Q ss_pred hhhhhhccCCCC--eEEEEeecCCCC-CCeEEEEEeeeecCcccchhhccCCCC-CCCCccccccccEEEEEeCCCCCCC
Q 016933 11 CKAAVAWEAGKP--LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL 86 (380)
Q Consensus 11 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G~e~vG~V~~vG~~v~~~ 86 (380)
|+|+++.+++.+ +++.+.+ |.+. +++++|++.++++|+.|+....+.... ...|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 578887654443 6676776 6666 599999999999999999887765432 3446689999999999999999999
Q ss_pred CCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCC
Q 016933 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (380)
Q Consensus 87 ~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 166 (380)
++||+|+... ..|++++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT-------------------------------------------------GQGGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec-------------------------------------------------CCceeEEEEEcCHHHceeCCC
Confidence 9999998541 024899999999999999999
Q ss_pred CCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEe
Q 016933 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi 245 (380)
++++.+++.+...+.+||.++.+...++++++++|+|+ |.+|++++++|+..|+ +|++++.++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99999988898899999998777788999999999997 9999999999999999 799998999999999999998888
Q ss_pred cCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-cccccccEEEeeee
Q 016933 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFF 323 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~ 323 (380)
+....+ +.+.+...+++ ++|.++|++|+ ..+..++++++++ |+++.+|....... .... ..+.++.++.+...
T Consensus 190 ~~~~~~--~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 190 DYRDPD--LRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW 264 (323)
T ss_pred ecCCcc--HHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence 776644 77778887776 89999999998 7788899999997 99999987532211 1111 22347778887664
Q ss_pred cCCCC------CCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 016933 324 GNYKP------RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 377 (380)
Q Consensus 324 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~ 377 (380)
..+.. .+.+.++++++.++.+.+ +.++.|+++++.++++.+.+++. +|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 265 GAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 43221 124677888888887643 36788999999999999887766 588763
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.8e-30 Score=240.70 Aligned_cols=295 Identities=24% Similarity=0.319 Sum_probs=225.6
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecCcccchhhccCCC---CCCCCccccccccEEEEEeCCCCCCCCCCCEEEecCccCC
Q 016933 24 IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC 100 (380)
Q Consensus 24 ~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~---~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~ 100 (380)
++++.++|+|.++||+|++.++++|+.|+..+.|..+ ....|.++|||++|+|+++|++++.+++||+|+......
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 7788899999999999999999999999988776542 133567899999999999999999999999998652110
Q ss_pred CCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccchhhcchhh
Q 016933 101 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180 (380)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~ 180 (380)
..|+|++|+.++.+.++++|+++++++++.+++.+
T Consensus 94 ---------------------------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 94 ---------------------------------------------GGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred ---------------------------------------------CCceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 02589999999999999999999999999999999
Q ss_pred hhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHH
Q 016933 181 STGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 259 (380)
Q Consensus 181 ~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~ 259 (380)
.+||+++.+...+++|++++|+|+ |.+|++++++|+.+|+ +|+++.++ ++.+.++++|++++++....+ +. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---h
Confidence 999999777777999999999997 9999999999999999 88888765 888888999998888776544 32 3
Q ss_pred HHhCC-CccEEEEcccCh-hhHHHHHHHhhcCCcEEEEEcCCCCCceeec---cccccccccEEEeeeecCCCCCCChHH
Q 016933 260 EMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPS 334 (380)
Q Consensus 260 ~~~~~-~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~ 334 (380)
..+.+ ++|+++||+|+. ......+..++++ |+++.+|.......... ..........+...... ...+.+.+
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 278 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK--PNAEDLEQ 278 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEec--CCHHHHHH
Confidence 33444 899999999852 2333444448996 99999987643222211 01111111222221111 11456888
Q ss_pred HHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 335 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
+++++.++++.. ++++.|+++++++|++.+.+++. +|+++
T Consensus 279 ~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 279 LAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 999999887653 36788999999999999987765 47663
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=3.5e-30 Score=235.09 Aligned_cols=282 Identities=22% Similarity=0.280 Sum_probs=227.0
Q ss_pred CeEEEEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCc
Q 016933 36 MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 115 (380)
Q Consensus 36 ~eVlV~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~ 115 (380)
+||+||+.++++|++|+....+.. ..+|.++|||++|+|+++|++++.|++||+|++..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999887754 34578999999999999999999999999998541
Q ss_pred ccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCC
Q 016933 116 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 195 (380)
Q Consensus 116 ~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 195 (380)
.|+|++|+.++.+.++++|+.+++.+++.+++++.++|.++.+...+++
T Consensus 60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 2589999999999999999999999999999999999999877788999
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC--CceEecCCCCCccHHHHHHHHhCC-CccEEEE
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 271 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG--~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d 271 (380)
|++++|+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++| ++.+++....+ +.+.+++.+.+ ++|+++|
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEe
Confidence 999999985 9999999999999999 8899989999999999988 67778765543 77788887766 8999999
Q ss_pred cccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCC------CCCChHHHHHHHHcCCCC
Q 016933 272 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK------PRTDLPSVVDMYMNKQLE 345 (380)
Q Consensus 272 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~ 345 (380)
++|+. .+..++++++++ |+++.+|..............+.++.++....+.... ..+.+.++++++.++++.
T Consensus 186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 99984 889999999997 9999998754221111222223344555544332210 012467788888888765
Q ss_pred CCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 346 LEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 346 ~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
+ ..++.++++++.++++.+.+++. +|+++
T Consensus 264 ~--~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 264 P--LPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred c--CCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 3 35678899999999999988776 47764
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=1.4e-29 Score=230.84 Aligned_cols=277 Identities=21% Similarity=0.322 Sum_probs=222.9
Q ss_pred EEEeeeecCcccchhhccCCCCCCCCccccccccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCccccc
Q 016933 40 IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 119 (380)
Q Consensus 40 V~v~~~~l~~~D~~~~~g~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (380)
||+.++++|+.|+....+..+ .|.++|||++|+|+++|++++.|++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999998877543 367899999999999999999999999998531
Q ss_pred CCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeE
Q 016933 120 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 199 (380)
Q Consensus 120 ~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v 199 (380)
.|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.+...+.+|++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 25899999999999999999999999999999999999987778889999999
Q ss_pred EEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--ceEecCCCCCccHHHHHHHHhCC-CccEEEEcccC
Q 016933 200 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 275 (380)
Q Consensus 200 lI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~--~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~ 275 (380)
+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|+ +.++++.+.+ +.+.+.+..++ ++|+++|++|+
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 89999899999999999998 7788776554 77778777765 89999999996
Q ss_pred hhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCC-----CCCChHHHHHHHHcCCCCCCCce
Q 016933 276 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK-----PRTDLPSVVDMYMNKQLELEKFI 350 (380)
Q Consensus 276 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 350 (380)
......+++++++ |+++.+|..............+.++.++.+..+.... ..+.+.++++++.++++.+. .
T Consensus 186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 261 (288)
T smart00829 186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P 261 (288)
T ss_pred -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence 7788899999997 9999998753211111222223455555554432111 11235677888888876543 4
Q ss_pred eeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 351 THRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 351 ~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
.+.|+++++.++++.+.+++. +|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 262 VTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred ceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 578999999999999988765 47663
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.96 E-value=5.8e-28 Score=208.15 Aligned_cols=295 Identities=19% Similarity=0.202 Sum_probs=222.5
Q ss_pred EEEeecC-CCCCCeEEEEEeeeecCcccchhhccCCCC-CCCCcccc----ccccEEEEEeCCCCCCCCCCCEEEecCcc
Q 016933 25 IQDVEVA-PPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFG----HEAAGVVESVGEGVSDLEVGDHVLPVFTG 98 (380)
Q Consensus 25 ~~~~~~p-~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-~~~p~v~G----~e~vG~V~~vG~~v~~~~~GdrV~~~~~~ 98 (380)
..+++++ ++++++||||.+|.+..|--...++.-.+. .-.|+.|| ..++|+|++. +.+++++||.|...
T Consensus 26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~--- 100 (343)
T KOG1196|consen 26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGI--- 100 (343)
T ss_pred eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEe---
Confidence 3444443 468899999999999876543332211111 11223232 2789999995 55789999999843
Q ss_pred CCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccc--eEeCCC--CCCccchh
Q 016933 99 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC--VAKINP--LAPLDKVC 174 (380)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~--~~~~p~--~~~~~~aa 174 (380)
. +|.||.++++.. .+++|. ++++-...
T Consensus 101 ---------------------------~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~yl 131 (343)
T KOG1196|consen 101 ---------------------------V----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYL 131 (343)
T ss_pred ---------------------------c----------------------cceEEEEecCcchhcccCCCCCccCHhhhh
Confidence 2 799999997753 344433 33333333
Q ss_pred -hcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCCC
Q 016933 175 -ILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHD 251 (380)
Q Consensus 175 -~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~~ 251 (380)
.+..+..|||..+.+...+++|++|+|-|| |++|+++.|+||.+|+ +|+++..+++|.++++. +|.+..+||.++.
T Consensus 132 g~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~ 210 (343)
T KOG1196|consen 132 GLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEES 210 (343)
T ss_pred hccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCcc
Confidence 356678999999999999999999999987 9999999999999999 99999999999999987 7999999998862
Q ss_pred ccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCc---eeeccc-c-ccccccEEEeeeecCC
Q 016933 252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---VFMTKP-I-NVLNERTLKGTFFGNY 326 (380)
Q Consensus 252 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~~~~~~-~-~~~~~~~i~g~~~~~~ 326 (380)
.+.+++++..++++|+.||.+|+ ..+...+..|+.. ||++++|+.+.-. ...+.. . -+.|++.+.|+....+
T Consensus 211 -~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~ 287 (343)
T KOG1196|consen 211 -DLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY 287 (343)
T ss_pred -CHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeech
Confidence 28889999888899999999999 8999999999996 9999999875321 111111 1 2348888988765554
Q ss_pred CCC--CChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 016933 327 KPR--TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 379 (380)
Q Consensus 327 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~ 379 (380)
.++ +.+..+..++++|++...+-+ .-+|+..+.||..|.++.+ +|.++.+.
T Consensus 288 ~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 288 LDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred hhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEee
Confidence 433 346788899999998765433 3369999999999999988 69998875
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=1.1e-27 Score=217.76 Aligned_cols=247 Identities=27% Similarity=0.417 Sum_probs=196.4
Q ss_pred CCCCccccccccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCcc
Q 016933 62 PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPV 141 (380)
Q Consensus 62 ~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~ 141 (380)
.++|.++|||++|+|+++|+++++|++||+|+..
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------- 51 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---------------------------------------------- 51 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----------------------------------------------
Confidence 4588999999999999999999999999999854
Q ss_pred ccccCCcceeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCc
Q 016933 142 NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS 221 (380)
Q Consensus 142 ~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~ 221 (380)
+.|++|+.++.+.++++|+++++++++.+ +.+.+||+++ ...++++++++||+|+|.+|++++++|+.+|++
T Consensus 52 ------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~ 123 (277)
T cd08255 52 ------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAR 123 (277)
T ss_pred ------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 26899999999999999999999999888 7899999986 578899999999998899999999999999994
Q ss_pred EEEEEcCChhHHHHHHhcC-CceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 222 RIIGVDRSSKRFEEAKKFG-VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 222 ~vi~~~~~~~~~~~~~~lG-~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
+|+++++++++.++++++| ++.+++.... ....+++|++||+++....+...+++++++ |+++.+|...
T Consensus 124 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~ 193 (277)
T cd08255 124 EVVGVDPDAARRELAEALGPADPVAADTAD---------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYG 193 (277)
T ss_pred cEEEECCCHHHHHHHHHcCCCccccccchh---------hhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccC
Confidence 4999999999999999999 5555443221 112238999999998767889999999997 9999998765
Q ss_pred CCceeeccccccc-cccEEEeeeecCC---------CCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC
Q 016933 301 KDAVFMTKPINVL-NERTLKGTFFGNY---------KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 370 (380)
Q Consensus 301 ~~~~~~~~~~~~~-~~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~ 370 (380)
.. ..... ..+. +..++.+...... ...+.++++++++.++.+.. .+.+.|+++++++|++.+.+++
T Consensus 194 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~ 269 (277)
T cd08255 194 LK-PLLLG-EEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLLFEDP 269 (277)
T ss_pred CC-ccccH-HHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHHHcCC
Confidence 33 11111 1122 4556665543221 11246889999999997553 3578899999999999998873
Q ss_pred c--eeEEE
Q 016933 371 G--LRCII 376 (380)
Q Consensus 371 ~--~Kvvi 376 (380)
. .|+++
T Consensus 270 ~~~~k~~~ 277 (277)
T cd08255 270 PECLKVVL 277 (277)
T ss_pred ccceeeeC
Confidence 3 58764
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=2.5e-27 Score=232.75 Aligned_cols=293 Identities=16% Similarity=0.172 Sum_probs=237.8
Q ss_pred eEEEEeecC---CCCCCeEEEEEeeeecCcccchhhccCCCCC-------CCCccccccccEEEEEeCCCCCCCCCCCEE
Q 016933 23 LIIQDVEVA---PPQAMEVRIKIKYTSLCRTDLYFWESKGQTP-------LFPRIFGHEAAGVVESVGEGVSDLEVGDHV 92 (380)
Q Consensus 23 ~~~~~~~~p---~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~-------~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV 92 (380)
+++.+-+.. +..++.=+--|-|++||..|+.+..|+.+.. ....++|-|++|+- +-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCcEE
Confidence 555555544 2356777899999999999999998876432 34568999999984 449999
Q ss_pred EecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeCCCCCCccc
Q 016933 93 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 172 (380)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~ 172 (380)
+....- -++++-+.++.+++|.+|++.++++
T Consensus 1499 M~mvpA-------------------------------------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVPA-------------------------------------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeeeh-------------------------------------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 854311 1689999999999999999999999
Q ss_pred hhhcchhhhhhhhhhhhccCCCCCCeEEEEc-CCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC----CceEecC
Q 016933 173 VCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG----VTDFVNT 247 (380)
Q Consensus 173 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG----~~~vi~~ 247 (380)
|++.||.++|+||||..+...++|++|||++ +|++|++||.+|.+.|+ +|+.+..+.+|++++++.- ...+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 9999999999999999999999999999995 59999999999999999 9999999999999998743 3445555
Q ss_pred CCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCC
Q 016933 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 326 (380)
Q Consensus 248 ~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 326 (380)
.+.+ |..-+...+.| |+|+|++.... +-+..+++||+-+ ||+..+|...-....++...-|.+|.+++|..+...
T Consensus 1609 Rdts--FEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RDTS--FEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred cccc--HHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence 5555 88889999998 99999999987 7899999999997 999999875433344444555679999999765433
Q ss_pred CCC--CChHHHHHHHHcCCC--CCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 016933 327 KPR--TDLPSVVDMYMNKQL--ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 379 (380)
Q Consensus 327 ~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi~~~ 379 (380)
.+. +.+.++..++++|.- ...|+.+++|+-+++++||++|.++++ +|+||++-
T Consensus 1685 mege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred hcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 222 357778888877732 256678999999999999999999998 69999863
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=2.2e-23 Score=161.77 Aligned_cols=108 Identities=36% Similarity=0.639 Sum_probs=94.5
Q ss_pred CCeEEEEEeeeecCcccchhhcc-CCCCCCCCccccccccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCC
Q 016933 35 AMEVRIKIKYTSLCRTDLYFWES-KGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 113 (380)
Q Consensus 35 ~~eVlV~v~~~~l~~~D~~~~~g-~~~~~~~p~v~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~ 113 (380)
|+||||||+++|||++|+.++.+ ......+|.++|||++|+|+++|+++++|++||||++.+...|+.|.+|+.+.+++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 68999999999999999999998 35567899999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCcccccCCCcccccCCCccccccCCcceeeEEEEeccceEeC
Q 016933 114 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 164 (380)
Q Consensus 114 ~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~ 164 (380)
|++.... |+. ..|+||||+.++.++++++
T Consensus 81 c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVL---GLG-------------------LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEET---TTS-------------------STCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEe---EcC-------------------CCCcccCeEEEehHHEEEC
Confidence 9877665 332 1369999999999999885
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.74 E-value=3.4e-17 Score=131.37 Aligned_cols=128 Identities=32% Similarity=0.555 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCC-CccEEEEcccChhhHHHHHH
Q 016933 206 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 284 (380)
Q Consensus 206 ~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~ 284 (380)
++|++++|+||.+|+ +|++++++++|+++++++|+++++++++.+ +.+.+++++++ ++|+||||+|.++.++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999997 999999999999999999999999998887 99999999998 99999999998899999999
Q ss_pred HhhcCCcEEEEEcCCCCCceeeccccc-cccccEEEeeeecCCCCCCChHHHHHHHHc
Q 016933 285 CVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMN 341 (380)
Q Consensus 285 ~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 341 (380)
+++++ |+++++|... .....++... +.+++++.|++.+. .++++++++++++
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 99997 9999999987 4455544444 45999999998654 3568888877653
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.45 E-value=1.8e-12 Score=121.84 Aligned_cols=176 Identities=21% Similarity=0.221 Sum_probs=134.1
Q ss_pred hhhhhhccC-CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHh
Q 016933 184 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 262 (380)
Q Consensus 184 ~~~l~~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~ 262 (380)
+.++.+..+ .-+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+. ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~--------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT--------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc--------HHHHH----
Confidence 445555444 4689999999999999999999999999 899999999999999999985431 21222
Q ss_pred CCCccEEEEcccChhhHHHH-HHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCCCCChH--HHHHHH
Q 016933 263 NGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLP--SVVDMY 339 (380)
Q Consensus 263 ~~~~d~v~d~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~--~~~~~~ 339 (380)
.++|+||+++|.+..+... +..++++ |+++.+|.. +..++.... ..+++++.++..+. ...+++ +.+.++
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~~~L-~~~el~i~g~~~~~--~~~~~~~g~aI~LL 328 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDVKGL-KENAVEVVNIKPQV--DRYELPDGRRIILL 328 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCHHHH-HhhccEEEEccCCc--ceEEcCCcchhhhh
Confidence 2589999999998888865 9999997 999999954 223333222 23788888876432 122455 689999
Q ss_pred HcCCC-CCCCceeee-----eccc-cHHHHHHHHHcCCc--eeEEEecC
Q 016933 340 MNKQL-ELEKFITHR-----IPFS-EINKAFEYMVKGEG--LRCIISME 379 (380)
Q Consensus 340 ~~~~~-~~~~~~~~~-----~~l~-~~~~a~~~l~~~~~--~Kvvi~~~ 379 (380)
.+|++ ++..+++|. ++|+ |+.++++.+.++.. .|+++.+.
T Consensus 329 a~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 329 AEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 99988 888888888 8999 99999999988765 47777654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.38 E-value=9.5e-12 Score=119.88 Aligned_cols=155 Identities=17% Similarity=0.133 Sum_probs=113.2
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE-ecCCCCC-----------ccHHHHHH
Q 016933 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-----------RPIQEVIA 259 (380)
Q Consensus 192 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v-i~~~~~~-----------~~~~~~~~ 259 (380)
+..++++|+|+|+|.+|++|++.|+.+|+ +|++++.+++|++.++++|++.+ ++..+.+ .++.+...
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 35689999999999999999999999999 89999999999999999999854 5553321 12333333
Q ss_pred HH-hC--CCccEEEEcccChh-----h-HHHHHHHhhcCCcEEEEEcCCCCCc-eeeccccc-cc-cccEEEeeeecCCC
Q 016933 260 EM-TN--GGVDRSVECTGNID-----N-MISAFECVHDGWGVAVLVGVPSKDA-VFMTKPIN-VL-NERTLKGTFFGNYK 327 (380)
Q Consensus 260 ~~-~~--~~~d~v~d~~g~~~-----~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~-~~-~~~~i~g~~~~~~~ 327 (380)
+. .+ +++|++|+|+|.+. + .+++++.++++ |+++.+|...+.. ....+... +. +++++.|.... .
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~--P 316 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDL--P 316 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCC--c
Confidence 33 33 37999999999643 5 49999999997 9999999853221 23322222 33 78899987632 2
Q ss_pred CCCChHHHHHHHHcCCCCCCCcee
Q 016933 328 PRTDLPSVVDMYMNKQLELEKFIT 351 (380)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~ 351 (380)
.+...++.+++.++.+.+.++++
T Consensus 317 -~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 -SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred -hhHHHHHHHHHHhCCccHHHHhc
Confidence 23333689999999887666554
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.24 E-value=1.8e-12 Score=103.42 Aligned_cols=119 Identities=18% Similarity=0.335 Sum_probs=76.5
Q ss_pred cCCceEecCCCCCccHHHHHHHHhCCCccEEEEccc--ChhhHHHHHHHhhcCCcEEEEEcCCCCCceeecccccc-ccc
Q 016933 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG--NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNE 315 (380)
Q Consensus 239 lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~ 315 (380)
||+++++||++.+ + ...+++|+|||++| ....+..+.++| ++ |+++.++. ....... .+.
T Consensus 1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHC
T ss_pred CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcc
Confidence 6999999998654 4 22458999999999 655557777888 96 99999874 1000111 111
Q ss_pred cEEEeeeecCCC----CCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 016933 316 RTLKGTFFGNYK----PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 376 (380)
Q Consensus 316 ~~i~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~~-~Kvvi 376 (380)
..+....+.... ..+.++++++++.+|++.+. +.++||++++++|++.+++++. +|+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 222222221100 22359999999999987665 7889999999999999999988 79986
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.61 E-value=1.6e-06 Score=83.74 Aligned_cols=107 Identities=21% Similarity=0.235 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE-ecCCCC-----------CccHHHHHHHH
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH-----------DRPIQEVIAEM 261 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v-i~~~~~-----------~~~~~~~~~~~ 261 (380)
.++++++|+|+|.+|++++++|+.+|+ .|++++.+.++++.++++|++.+ ++..+. ..++.+...+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 79999999999999999999763 332210 11234333333
Q ss_pred hC---CCccEEEEcc---cChh---hHHHHHHHhhcCCcEEEEEcCCCCC
Q 016933 262 TN---GGVDRSVECT---GNID---NMISAFECVHDGWGVAVLVGVPSKD 302 (380)
Q Consensus 262 ~~---~~~d~v~d~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~ 302 (380)
.. .++|++|+|+ |.+. ..+.+++.++++ +.++.++...+.
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 33 3799999999 6543 577899999997 999988876543
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.49 E-value=3.9e-07 Score=82.56 Aligned_cols=167 Identities=17% Similarity=0.252 Sum_probs=102.6
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhc----CCceEecCCCCCccHHHHHHHHhCC
Q 016933 190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG 264 (380)
Q Consensus 190 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~-~vi~~~~~~~~~~~~~~l----G~~~vi~~~~~~~~~~~~~~~~~~~ 264 (380)
.+.+++|++||.+|+|. |..++++++..|.. +|++++.+++.++.+++. |.+.+- ....+ +.+ + .+..+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d--~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGE--IEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcc--hhh-C-CCCCC
Confidence 35688999999999877 88888888887753 799999999999988773 332221 11111 111 1 11234
Q ss_pred CccEEEEcc------cChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeeeecCCCCCCChHHHHHH
Q 016933 265 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 338 (380)
Q Consensus 265 ~~d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 338 (380)
.+|+|+... .....+..+.+.|+++ |++++.+..... ... ..+.+...+.+..... .....++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~~---~~~~~~~~~~~~~~~~---~~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-ELP---EEIRNDAELYAGCVAG---ALQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CCC---HHHHHhHHHHhccccC---CCCHHHHHHH
Confidence 799988543 2345789999999997 999988765322 111 1111222222211111 1245667777
Q ss_pred HHc-CCCCCCCceeeeeccccHHHHHHHH--HcCC
Q 016933 339 YMN-KQLELEKFITHRIPFSEINKAFEYM--VKGE 370 (380)
Q Consensus 339 ~~~-~~~~~~~~~~~~~~l~~~~~a~~~l--~~~~ 370 (380)
+++ |.........+.++++++.++++.+ .+++
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~ 252 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR 252 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence 766 4333332244567889999999988 5544
No 134
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.47 E-value=1.9e-06 Score=77.70 Aligned_cols=204 Identities=11% Similarity=0.091 Sum_probs=118.7
Q ss_pred ceeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhcc---CCCCCCeEEEEcC-CHHHHHHHHHHH-HcCCcEE
Q 016933 149 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGL-GAVGLAAAEGAR-IAGASRI 223 (380)
Q Consensus 149 ~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~vlI~G~-g~~G~~ai~la~-~~g~~~v 223 (380)
.|-+|..+..+..+.- ......+..-| .+.|+|. |.+.. +.-..+.|+|.+| +.+++..+.+++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4677777665543311 11122222223 3455553 22221 1233467888887 889988888888 4555489
Q ss_pred EEEcCChhHHHHHHhcCC-ceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCCCC
Q 016933 224 IGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302 (380)
Q Consensus 224 i~~~~~~~~~~~~~~lG~-~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 302 (380)
|++ +|..+.+..+.+|+ |.|+.|++ +..+.....-+++|..|+.+++..+.+.+....-..+.+|.+..+
T Consensus 166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~ 236 (314)
T PF11017_consen 166 VGL-TSARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWD 236 (314)
T ss_pred EEE-ecCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCcc
Confidence 999 77888889999998 77887766 333433467899999999999999999998874557788876533
Q ss_pred ceeecccc------------ccccccEEEeeeecCCCCCCChHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC
Q 016933 303 AVFMTKPI------------NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 370 (380)
Q Consensus 303 ~~~~~~~~------------~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~l~~~~ 370 (380)
..-..... .+.+.+.-.|... ..+.+.+.+..+......+- .+.+.-+.+.+.++++.+.+++
T Consensus 237 ~~~~~~~l~g~~~~~FFAp~~~~kr~~~~G~~~----~~~r~~~aw~~f~~~~~~wl-~~~~~~G~ea~~~~y~~l~~G~ 311 (314)
T PF11017_consen 237 KVEAPADLPGPRPEFFFAPDQIDKRIKEWGAAE----FFQRMAAAWKRFAADAQPWL-KVEEVAGPEAVEAAYQDLLAGK 311 (314)
T ss_pred ccCccccCCCCCcEEEeChHHHHHHHHHhCHHH----HHHHHHHHHHHHHHhhcCcE-EEEEecCHHHHHHHHHHHhcCC
Confidence 22110000 0001111111110 00122233332222222222 1457779999999999998875
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.38 E-value=6.8e-06 Score=77.99 Aligned_cols=103 Identities=26% Similarity=0.270 Sum_probs=79.3
Q ss_pred hhhhhhhccCCC-CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHH
Q 016933 183 GLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 261 (380)
Q Consensus 183 a~~~l~~~~~~~-~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~ 261 (380)
.|.++.+...+. .|++++|+|.|.+|...++.++.+|+ +|+++++++.+...+...|++ +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 455544443544 89999999999999999999999999 899999998887766667764 221 22222
Q ss_pred hCCCccEEEEcccChhhHH-HHHHHhhcCCcEEEEEcCCC
Q 016933 262 TNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 262 ~~~~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 300 (380)
.++|++|+++|....+. ..+..++++ +.++.+|...
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 26899999999877776 688888996 8888888764
No 136
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.29 E-value=2.3e-05 Score=71.58 Aligned_cols=99 Identities=18% Similarity=0.269 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
.+++++|+|.|.+|.++++.++.+|+ +|++++++.++.+.++++|++.+ .+ +.+.+... .+|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~l~-~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEEVG-KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHHhC-CCCEEEECCC
Confidence 58999999999999999999999999 99999999999999999987533 11 11222222 5899999987
Q ss_pred ChhhHHHHHHHhhcCCcEEEEEcCCCCCcee
Q 016933 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF 305 (380)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 305 (380)
..-.....++.++++ +.++.++...+...+
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pggtd~ 249 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGGTDF 249 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCCcCe
Confidence 643456778889996 999988877655433
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.17 E-value=2.5e-05 Score=73.72 Aligned_cols=102 Identities=28% Similarity=0.320 Sum_probs=78.3
Q ss_pred hhhhhhccC-CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHh
Q 016933 184 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 262 (380)
Q Consensus 184 ~~~l~~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~ 262 (380)
+.++.+..+ ..+|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal---- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA---- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH----
Confidence 344444433 4689999999999999999999999999 899998888887777777763 321 22222
Q ss_pred CCCccEEEEcccChhhHHH-HHHHhhcCCcEEEEEcCCC
Q 016933 263 NGGVDRSVECTGNIDNMIS-AFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 263 ~~~~d~v~d~~g~~~~~~~-~~~~l~~~~G~~v~~g~~~ 300 (380)
.+.|++|+++|....+.. .+..++++ +.++.+|...
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 257999999999887774 88888996 8999888753
No 138
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.12 E-value=1.6e-07 Score=90.00 Aligned_cols=159 Identities=19% Similarity=0.238 Sum_probs=103.7
Q ss_pred ccccccEEEEEeCCCCCCCCCCCEEEecCccCCCCCccccCCCcCCCcccccCCCCcccccCCCcccccCCCccccccCC
Q 016933 68 FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGT 147 (380)
Q Consensus 68 ~G~e~vG~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~g~~~~~~~~~ 147 (380)
-|.|+++.+.+|+++.++ +|++.+.+ ||-|.+| +..|...... |... .
T Consensus 90 ~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~---g~~l-------------------~ 137 (417)
T TIGR01035 90 TGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV---GKVL-------------------E 137 (417)
T ss_pred CchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc---hHHH-------------------H
Confidence 578999999999998776 67777777 8888888 5556544433 3221 1
Q ss_pred cceeeEEEEeccceEe---C-CCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEE
Q 016933 148 STFSEYTVVHSGCVAK---I-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRI 223 (380)
Q Consensus 148 G~~a~~~~v~~~~~~~---~-p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~v 223 (380)
+.|++++.++. .+.. + +..++...+ |.....+..+..++++++|+|+|.+|.++++.++..|+.+|
T Consensus 138 ~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~---------Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V 207 (417)
T TIGR01035 138 RLFQKAFSVGK-RVRTETDISAGAVSISSA---------AVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKI 207 (417)
T ss_pred HHHHHHHHHhh-hhhhhcCCCCCCcCHHHH---------HHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEE
Confidence 47888877765 3332 2 222221111 11101223344678999999999999999999999996689
Q ss_pred EEEcCChhHHH-HHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhh
Q 016933 224 IGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 278 (380)
Q Consensus 224 i~~~~~~~~~~-~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 278 (380)
++++++.++.+ +++++|.. .+..++ +.+.+ .++|+||+|++.+..
T Consensus 208 ~v~~rs~~ra~~la~~~g~~-~i~~~~----l~~~l-----~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 208 LIANRTYERAEDLAKELGGE-AVKFED----LEEYL-----AEADIVISSTGAPHP 253 (417)
T ss_pred EEEeCCHHHHHHHHHHcCCe-EeeHHH----HHHHH-----hhCCEEEECCCCCCc
Confidence 99999988754 66777764 222211 22222 258999999987654
No 139
>PLN02494 adenosylhomocysteinase
Probab=98.07 E-value=4.4e-05 Score=72.79 Aligned_cols=101 Identities=21% Similarity=0.288 Sum_probs=79.2
Q ss_pred hhhhhhccCC-CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHh
Q 016933 184 LGATLNVAKP-ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 262 (380)
Q Consensus 184 ~~~l~~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~ 262 (380)
+.++.+..++ -.|++++|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+ + +.+.++
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv-~-------leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL-T-------LEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec-c-------HHHHHh---
Confidence 4445554443 679999999999999999999999999 89999998887777777777522 1 322221
Q ss_pred CCCccEEEEcccChhhH-HHHHHHhhcCCcEEEEEcCC
Q 016933 263 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 263 ~~~~d~v~d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 299 (380)
..|+++++.|....+ ...++.++++ +.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 479999999986654 7899999997 999999874
No 140
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.06 E-value=7.6e-05 Score=66.63 Aligned_cols=131 Identities=20% Similarity=0.189 Sum_probs=82.4
Q ss_pred ceeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcC
Q 016933 149 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 228 (380)
Q Consensus 149 ~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~ 228 (380)
+|.+|.. +...++.+++++++..+. .+.. ......+. ..+.++++||-+|+|. |.+++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt-~~~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTT-RLCLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CHHH-HHHHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555544 667788888887766543 2211 11111211 2256889999999986 888876655 67767999999
Q ss_pred ChhHHHHHHhc----CCceEecCCCCCccHHHHHHHHhCCCccEEEEcccCh---hhHHHHHHHhhcCCcEEEEEcCC
Q 016933 229 SSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 229 ~~~~~~~~~~l----G~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
++...+.+++. +....+.....+ ..+|+|+...... ..+..+.+.|+++ |.+++.|..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~~~~~~------------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVYLPQGD------------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEccCC------------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99988887663 221111110100 1589998655432 3456788889997 999988764
No 141
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.05 E-value=1.1e-05 Score=74.46 Aligned_cols=107 Identities=25% Similarity=0.282 Sum_probs=77.8
Q ss_pred ceEeCCCCCCccchhhcchhhhhhhhhhhhccCC----CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHH-H
Q 016933 160 CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP----ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-E 234 (380)
Q Consensus 160 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~----~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~-~ 234 (380)
.++++|+.+..+.++... +.++++.++ +.+.. -++++|+|+|+|.+|.++++.++..|+.+|++++++.++. +
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 567788888888777654 566776664 33322 4789999999999999999999988877899999998765 6
Q ss_pred HHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhh
Q 016933 235 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 278 (380)
Q Consensus 235 ~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 278 (380)
+++++|+. +++.++ +.+.+ ..+|+||.+++.+..
T Consensus 218 la~~~g~~-~~~~~~----~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLDE----LLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHHH----HHHHH-----hcCCEEEECCCCCch
Confidence 77888873 332211 22222 248999999998655
No 142
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.85 E-value=0.00013 Score=61.94 Aligned_cols=105 Identities=18% Similarity=0.274 Sum_probs=78.1
Q ss_pred hhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChh----HHHHHHhcCCceEe-cCCCCCcc
Q 016933 179 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKFGVTDFV-NTSEHDRP 253 (380)
Q Consensus 179 ~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~----~~~~~~~lG~~~vi-~~~~~~~~ 253 (380)
+...|. +.....+++|++||=+|+| .|+.++-+|+..| +|+.+.+.++ ....++.+|.+.|. ...+....
T Consensus 58 P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G 132 (209)
T COG2518 58 PHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKG 132 (209)
T ss_pred cHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccC
Confidence 334443 3577889999999999986 4999999999888 8999999886 44446678885543 33332222
Q ss_pred HHHHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEEE
Q 016933 254 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 254 ~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 296 (380)
| ... +||.|+-+.+.+..-..+++.|+++ |+++.-
T Consensus 133 ~-------~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 133 W-------PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred C-------CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 2 233 8999999988877778999999997 987754
No 143
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.85 E-value=0.0002 Score=68.57 Aligned_cols=101 Identities=22% Similarity=0.268 Sum_probs=76.5
Q ss_pred hhhhhccC-CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhC
Q 016933 185 GATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 263 (380)
Q Consensus 185 ~~l~~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~ 263 (380)
..+++..+ .-.|++++|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+ + +.+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~-~-------leell----- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV-T-------LEDVV----- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec-c-------HHHHH-----
Confidence 44444433 4578999999999999999999999999 89999888777655555676422 1 32222
Q ss_pred CCccEEEEcccChhhHH-HHHHHhhcCCcEEEEEcCCC
Q 016933 264 GGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 264 ~~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 300 (380)
...|+|+.++|....+. ..++.++++ +.++.+|...
T Consensus 308 ~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 308 ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 25899999999877775 899999997 9999998753
No 144
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.84 E-value=0.00016 Score=68.16 Aligned_cols=99 Identities=22% Similarity=0.185 Sum_probs=69.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
++.+++|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.. ++........+ . +.+.+.. ..+|++|+++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~----~~l~~~l-~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-A----YEIEDAV-KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-H----HHHHHHH-ccCCEEEEcc
Confidence 34569999999999999999999999 89999999888877654 55432222221 1 1222222 2589999998
Q ss_pred c---C--hh-hHHHHHHHhhcCCcEEEEEcCCCC
Q 016933 274 G---N--ID-NMISAFECVHDGWGVAVLVGVPSK 301 (380)
Q Consensus 274 g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 301 (380)
+ . +. .....++.++++ +.++.++...+
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 3 2 22 246788889997 99998886543
No 145
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.81 E-value=2e-05 Score=78.96 Aligned_cols=81 Identities=25% Similarity=0.323 Sum_probs=60.8
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcC---------------------ChhHHHHHHhcCCceEecCCC-
Q 016933 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---------------------SSKRFEEAKKFGVTDFVNTSE- 249 (380)
Q Consensus 192 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~---------------------~~~~~~~~~~lG~~~vi~~~~- 249 (380)
..++|++|+|+|+|..|+++++.++..|+ +|++++. .+.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 7888874 245678888999987776543
Q ss_pred CCccHHHHHHHHhCCCccEEEEcccChhh
Q 016933 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDN 278 (380)
Q Consensus 250 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 278 (380)
.+... +.+ ..++|+||+++|....
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQLG 235 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCCC
Confidence 22111 111 2369999999998543
No 146
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.75 E-value=0.00075 Score=61.35 Aligned_cols=99 Identities=20% Similarity=0.307 Sum_probs=72.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
.|++++|+|.|.+|.+.+..++.+|+ +|++++++.++.+.+.++|...+ . + +.+.+.. ..+|+|++++.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHHh-ccCCEEEECCC
Confidence 57899999999999999999999999 99999999988887777775422 1 1 1122222 26899999987
Q ss_pred ChhhHHHHHHHhhcCCcEEEEEcCCCCCcee
Q 016933 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF 305 (380)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 305 (380)
..-.....++.++++ ..++.++...+...+
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~tdf 248 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPGGTDF 248 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCCCCCH
Confidence 532234567778886 778888776544433
No 147
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.55 E-value=0.00011 Score=70.76 Aligned_cols=90 Identities=24% Similarity=0.272 Sum_probs=62.9
Q ss_pred hhhhhhhhhhhcc---CCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCceEecCCCCCccH
Q 016933 179 GVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPI 254 (380)
Q Consensus 179 ~~~ta~~~l~~~~---~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~-~~~~lG~~~vi~~~~~~~~~ 254 (380)
+.+.++.++.... +-.++++|+|+|+|.+|.++++.++..|+.+|++++++.++.+ +++++|.+ +++.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~------- 233 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL------- 233 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH-------
Confidence 4455555542221 2257899999999999999999999999878999999988855 67778864 3322
Q ss_pred HHHHHHHhCCCccEEEEcccChhh
Q 016933 255 QEVIAEMTNGGVDRSVECTGNIDN 278 (380)
Q Consensus 255 ~~~~~~~~~~~~d~v~d~~g~~~~ 278 (380)
+.+.+.. .++|+||+|+|.+..
T Consensus 234 -~~~~~~l-~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 234 -DELPEAL-AEADIVISSTGAPHP 255 (423)
T ss_pred -HHHHHHh-ccCCEEEECCCCCCc
Confidence 1122221 268999999997643
No 148
>PRK08324 short chain dehydrogenase; Validated
Probab=97.55 E-value=0.00075 Score=69.25 Aligned_cols=137 Identities=22% Similarity=0.267 Sum_probs=84.2
Q ss_pred ceeeEEEEeccceEeCCCCCCccchhhcchhhhhhhhhhhhccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEc
Q 016933 149 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD 227 (380)
Q Consensus 149 ~~a~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~ 227 (380)
++.+|..+++..++++ +..+.+++.... .......+|+++||+|+ |.+|.+.++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~----------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQR----------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhc----------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 4567777776666666 455555543110 00122346799999997 9999999999999999 899999
Q ss_pred CChhHHHHHHh-cCC--c-eE--ecCCCCCccHHHHHHHHh--CCCccEEEEcccCh-----------------------
Q 016933 228 RSSKRFEEAKK-FGV--T-DF--VNTSEHDRPIQEVIAEMT--NGGVDRSVECTGNI----------------------- 276 (380)
Q Consensus 228 ~~~~~~~~~~~-lG~--~-~v--i~~~~~~~~~~~~~~~~~--~~~~d~v~d~~g~~----------------------- 276 (380)
++.++.+.+.+ ++. . .+ .|..+.+ .+.+.+.+.. .+++|++|+++|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 99887665543 433 1 12 2333321 1223333221 23799999999831
Q ss_pred --hhHHHHHHHhhc---CCcEEEEEcCC
Q 016933 277 --DNMISAFECVHD---GWGVAVLVGVP 299 (380)
Q Consensus 277 --~~~~~~~~~l~~---~~G~~v~~g~~ 299 (380)
..+..+++.+++ + |++++++..
T Consensus 533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 533 HFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 123444555655 4 789988764
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.50 E-value=0.00045 Score=55.36 Aligned_cols=73 Identities=26% Similarity=0.378 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCc--eEecCCCCCccHHHHHHHHhCCCccEEEE
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~-~lG~~--~vi~~~~~~~~~~~~~~~~~~~~~d~v~d 271 (380)
++++++|+|+|++|.+++..+...|+++|+.+.|+.+|.+.+. +++.. .++.+++ +.+.+ ..+|+||+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVIN 81 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEEE
Confidence 5789999999999999999999999988999999998876664 45332 2344433 21111 25899999
Q ss_pred cccCh
Q 016933 272 CTGNI 276 (380)
Q Consensus 272 ~~g~~ 276 (380)
|++.+
T Consensus 82 aT~~~ 86 (135)
T PF01488_consen 82 ATPSG 86 (135)
T ss_dssp -SSTT
T ss_pred ecCCC
Confidence 98874
No 150
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.44 E-value=0.00045 Score=63.00 Aligned_cols=97 Identities=22% Similarity=0.275 Sum_probs=64.6
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCce-EecCCCCCccHHHHHHHHhCCCcc
Q 016933 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD-FVNTSEHDRPIQEVIAEMTNGGVD 267 (380)
Q Consensus 193 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l----G~~~-vi~~~~~~~~~~~~~~~~~~~~~d 267 (380)
..++++||-+|+|. |.+++.+++ .|+.+|++++.++...+.+++. +... +..... + ......+.||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~------~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y------LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c------cccccCCCce
Confidence 45789999999876 888877766 5766999999999888777662 2211 111111 0 1111234799
Q ss_pred EEEEcccCh---hhHHHHHHHhhcCCcEEEEEcCC
Q 016933 268 RSVECTGNI---DNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 268 ~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
+|+...... ..+..+.+.|+++ |.+++.|..
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 998754432 3566788999997 999887754
No 151
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.28 E-value=0.0018 Score=56.17 Aligned_cols=79 Identities=20% Similarity=0.363 Sum_probs=58.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCC----ceEecCCCCCccHHHHHHHHhCC--Cc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV----TDFVNTSEHDRPIQEVIAEMTNG--GV 266 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~----~~vi~~~~~~~~~~~~~~~~~~~--~~ 266 (380)
+++.++|+|+ +++|.+.+......|+ +|+.+.|..+|++.+.+ ++. ...+|..+.+ ...+.+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCcc
Confidence 3578899998 9999999999999999 99999999999887755 773 1234444432 244445544444 69
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|+.++..|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999885
No 152
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.27 E-value=0.0025 Score=58.77 Aligned_cols=102 Identities=23% Similarity=0.276 Sum_probs=72.5
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHh
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 262 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~ 262 (380)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.+++ .|.+.+..... + ..+....
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D--~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-D--GYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-C--hhhcccc--
Confidence 455678899999999997 59999999998763 379999999987666554 66654432221 2 2111111
Q ss_pred CCCccEEEEcccChhhHHHHHHHhhcCCcEEEEE
Q 016933 263 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 263 ~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 296 (380)
.+.+|+|+.+.+.......+.+.++++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999999888766677889999997 987763
No 153
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.23 E-value=0.0027 Score=60.24 Aligned_cols=110 Identities=22% Similarity=0.241 Sum_probs=76.1
Q ss_pred hhhhhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHH
Q 016933 179 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 258 (380)
Q Consensus 179 ~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~ 258 (380)
+-...+..+.+..++++|++||-+|+| .|.+++.+++..|+ +|++++.+++..+.+++.....-+.....+ +.
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~~--- 223 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--YR--- 223 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--hh---
Confidence 344455555677788999999999985 57788889988898 999999999999998874432111111111 21
Q ss_pred HHHhCCCccEEEEc-----ccC---hhhHHHHHHHhhcCCcEEEEEcC
Q 016933 259 AEMTNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 259 ~~~~~~~~d~v~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
.+ .+.+|.|+.. +|. ...+..+.+.|+|+ |.+++...
T Consensus 224 -~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i 268 (383)
T PRK11705 224 -DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI 268 (383)
T ss_pred -hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 11 3478988643 333 24678889999997 99887644
No 154
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.21 E-value=0.0048 Score=52.94 Aligned_cols=102 Identities=21% Similarity=0.420 Sum_probs=70.0
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cC-CceEecCCCCCccHHHHHHHHh
Q 016933 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG-VTDFVNTSEHDRPIQEVIAEMT 262 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vi~~~~~~~~~~~~~~----lG-~~~vi~~~~~~~~~~~~~~~~~ 262 (380)
....+.++++||-+|+|. |.+++.+|+..+. .+|++++.+++..+.+++ +| .+.+..... + ..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~-d--~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG-E--APEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe-c--hhhhHhhc-
Confidence 345788999999999987 8999999987642 389999999998886653 56 333221111 1 22222222
Q ss_pred CCCccEEEEcccC---hhhHHHHHHHhhcCCcEEEEE
Q 016933 263 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 263 ~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 296 (380)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2479999986543 34677888899997 998753
No 155
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0072 Score=54.61 Aligned_cols=77 Identities=21% Similarity=0.381 Sum_probs=54.9
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE-ecCCCCCccHHHHHHHHh--CCCccEEEEc
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSVEC 272 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~v~d~ 272 (380)
+++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+.+...+ .|..+.+ .+.+.+.... .+++|+++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGA-ALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEEC
Confidence 47899997 9999999998888899 89999999888777766665433 3444322 2333333332 2379999999
Q ss_pred ccC
Q 016933 273 TGN 275 (380)
Q Consensus 273 ~g~ 275 (380)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 983
No 156
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0033 Score=57.02 Aligned_cols=79 Identities=19% Similarity=0.326 Sum_probs=56.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE-ecCCCCCccHHHHHH---HHhCCCccEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIA---EMTNGGVDRS 269 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v-i~~~~~~~~~~~~~~---~~~~~~~d~v 269 (380)
.++++||+|+ |.+|...++.....|+ +|++++++.++.+.+.+.+.+.+ .|..+.+ .+.+.+. +...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPE-SIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHH-HHHHHHHHHHHHcCCCccEE
Confidence 4578999998 9999999888888899 89999999988887777665443 3443322 1222232 2333579999
Q ss_pred EEcccC
Q 016933 270 VECTGN 275 (380)
Q Consensus 270 ~d~~g~ 275 (380)
+++.|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
No 157
>PRK06182 short chain dehydrogenase; Validated
Probab=97.14 E-value=0.0078 Score=54.35 Aligned_cols=79 Identities=20% Similarity=0.389 Sum_probs=55.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE-ecCCCCCccHHHHHHHHh--CCCccEEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSV 270 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~v~ 270 (380)
++++++|+|+ |.+|...+..+...|+ +|++++++.++.+.+.+.+...+ .|..+.+ .+.+.+++.. .+++|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEA-SIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEE
Confidence 3678999997 9999999998888899 89999999888776655555332 3443322 2333333322 23799999
Q ss_pred EcccC
Q 016933 271 ECTGN 275 (380)
Q Consensus 271 d~~g~ 275 (380)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
No 158
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.13 E-value=0.011 Score=52.09 Aligned_cols=104 Identities=23% Similarity=0.346 Sum_probs=66.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc---CCceEecCCCCC-ccHHHHHHHHhC--CCc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTDFVNTSEHD-RPIQEVIAEMTN--GGV 266 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~l---G~~~vi~~~~~~-~~~~~~~~~~~~--~~~ 266 (380)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +.-+.+..+-.+ ..+.+.+++... +++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999997 9999999999999999 899999988877655 222 222222222111 112222222211 368
Q ss_pred cEEEEcccChh-----------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 016933 267 DRSVECTGNID-----------------------NMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 267 d~v~d~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
|.++.+.|... .+...++.+.++ |+++.++...
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 99999887421 134555666776 8898887653
No 159
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.01 E-value=0.0027 Score=52.93 Aligned_cols=101 Identities=22% Similarity=0.220 Sum_probs=66.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec-CCCC--------------CccHHHHHHH
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEH--------------DRPIQEVIAE 260 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~-~~~~--------------~~~~~~~~~~ 260 (380)
..+|+|+|+|.+|..|+.+++.+|+ +++..+...++.+..+..++..+.. +.+. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3789999999999999999999999 8999999999999888888755432 1111 1112222222
Q ss_pred HhCCCccEEEEcccC-----hh-hHHHHHHHhhcCCcEEEEEcCC
Q 016933 261 MTNGGVDRSVECTGN-----ID-NMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 261 ~~~~~~d~v~d~~g~-----~~-~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
... .+|+++-+.-- +. .....++.|+++ ..++.+..-
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 222 47888854321 11 245788889986 777777543
No 160
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.96 E-value=0.0096 Score=50.13 Aligned_cols=93 Identities=23% Similarity=0.311 Sum_probs=63.8
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccC--
Q 016933 199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN-- 275 (380)
Q Consensus 199 vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-- 275 (380)
|+|+|+ |.+|...++.+...|. +|+++.+++++.+. ..+.+.+ ..+-.+ . +.+.+... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~-~~d~~d--~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEII-QGDLFD--P-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEE-ESCTTC--H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccc-eeeehh--h-hhhhhhhh-hcchhhhhhhhhc
Confidence 789998 9999999999999998 99999999998876 4455433 233333 2 23444333 69999999984
Q ss_pred --hhhHHHHHHHhhcC-CcEEEEEcCC
Q 016933 276 --IDNMISAFECVHDG-WGVAVLVGVP 299 (380)
Q Consensus 276 --~~~~~~~~~~l~~~-~G~~v~~g~~ 299 (380)
.......++.++.. -.+++.++..
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred ccccccccccccccccccccceeeecc
Confidence 23455666666553 1367766543
No 161
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.94 E-value=0.0099 Score=50.27 Aligned_cols=81 Identities=17% Similarity=0.289 Sum_probs=59.9
Q ss_pred CCCCeEEEEcC--CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-EecCCCCC--ccHHHHHHHHhCCCcc
Q 016933 194 ERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVD 267 (380)
Q Consensus 194 ~~g~~vlI~G~--g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~-~lG~~~-vi~~~~~~--~~~~~~~~~~~~~~~d 267 (380)
...+.|||+|+ |++|++.+.--...|+ .|+++.++.++.+.+. ++|... =+|..+++ ..+...++..+.|+.|
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence 34578999974 9999987777777899 9999999998887776 778633 35555543 2345556666667899
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+.++..|.
T Consensus 84 ~L~NNAG~ 91 (289)
T KOG1209|consen 84 LLYNNAGQ 91 (289)
T ss_pred EEEcCCCC
Confidence 99998775
No 162
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.94 E-value=0.0059 Score=51.36 Aligned_cols=79 Identities=23% Similarity=0.333 Sum_probs=57.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC---ceEecCCCCC--ccHHHHHHHHhCCCccE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---TDFVNTSEHD--RPIQEVIAEMTNGGVDR 268 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~---~~vi~~~~~~--~~~~~~~~~~~~~~~d~ 268 (380)
.|.+|||+|+ +++|++.++--..+|= +||...|++++++.+++.-. ..|.|..+.+ ..+.+.++...+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 4789999975 9999988888888887 99999999999999988544 2355555433 224444443322 5789
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
++++.|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9998874
No 163
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.92 E-value=0.0078 Score=50.67 Aligned_cols=90 Identities=31% Similarity=0.387 Sum_probs=63.0
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
-.|++|.|+|.|.+|...+++++.+|+ +|++.+++....+...+.+... .+ +.+.+++ .|+|+.+.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~~----l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----VS----LDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----SS----HHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----ee----hhhhcch-----hhhhhhhh
Confidence 468999999999999999999999999 9999999888776555555521 11 4443433 68988877
Q ss_pred cChh-----hHHHHHHHhhcCCcEEEEEcC
Q 016933 274 GNID-----NMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 274 g~~~-----~~~~~~~~l~~~~G~~v~~g~ 298 (380)
...+ .-...++.++++ ..+|.++-
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred ccccccceeeeeeeeeccccc-eEEEeccc
Confidence 6322 133677888886 77766643
No 164
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.92 E-value=0.0024 Score=55.06 Aligned_cols=104 Identities=23% Similarity=0.343 Sum_probs=68.4
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHH----hcCCceE-ecCCCCCccHHHHHHH
Q 016933 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHDRPIQEVIAE 260 (380)
Q Consensus 187 l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~-~vi~~~~~~~~~~~~~----~lG~~~v-i~~~~~~~~~~~~~~~ 260 (380)
+.+...+++|++||-+|+| .|+.++-+|+..|.. +|+++++.++-.+.++ .+|.+.| +...+....+.
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~----- 137 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWP----- 137 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTG-----
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccc-----
Confidence 4566779999999999986 488899999988743 6999998886555444 4566543 22222111110
Q ss_pred HhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEE-EcC
Q 016933 261 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL-VGV 298 (380)
Q Consensus 261 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~-~g~ 298 (380)
..++||.|+-+.+.+..-..+++.|+++ |+++. ++.
T Consensus 138 -~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~~ 174 (209)
T PF01135_consen 138 -EEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIGQ 174 (209)
T ss_dssp -GG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEESS
T ss_pred -cCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEcc
Confidence 1237999999888877778999999997 99886 443
No 165
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.83 E-value=0.014 Score=48.56 Aligned_cols=104 Identities=21% Similarity=0.346 Sum_probs=70.6
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHhCC
Q 016933 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 264 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~~~ 264 (380)
...++++|+.++=+|+| .|..++++|...-..+|+++++++++.++.+. ||.+.+...... -.+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC--
Confidence 34568899966667875 36677788855544499999999999888754 887754322221 112222211
Q ss_pred CccEEEEcccC--hhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 265 GVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 265 ~~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
.+|.+|---|. +..++.++..|+++ |++|.-..+
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 58999876553 24688999999997 999877654
No 166
>PRK12742 oxidoreductase; Provisional
Probab=96.78 E-value=0.032 Score=48.99 Aligned_cols=101 Identities=22% Similarity=0.304 Sum_probs=62.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHH-HHhcCCceE-ecCCCCCccHHHHHHHHhCCCccEEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE-AKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV 270 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~-~~~~~~~-~~~lG~~~v-i~~~~~~~~~~~~~~~~~~~~~d~v~ 270 (380)
+++++||+|+ |.+|...++.+...|+ +|+.+.+ ++++.+. ..+++...+ .|..+. ..+.+.+... +++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADR-DAVIDVVRKS--GALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCH-HHHHHHHHHh--CCCcEEE
Confidence 4689999997 9999999998888999 6766544 4444433 345565432 232221 1233333321 3699999
Q ss_pred EcccChh-------------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 016933 271 ECTGNID-------------------------NMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 271 d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
++.|... ....+...+... |+++.++...
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 9987521 012344455665 8998887643
No 167
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.76 E-value=0.0098 Score=53.26 Aligned_cols=98 Identities=20% Similarity=0.147 Sum_probs=72.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 275 (380)
..+|.|+|+|.+|.-|+.+|--+|+ +|+.++.+.+|+..+.++-..++-........+.+.++ +.|+++.++=-
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLI 241 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLI 241 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEe
Confidence 3567788999999999999999999 99999999999999988554443322232222444332 47999887532
Q ss_pred h-----h-hHHHHHHHhhcCCcEEEEEcCCC
Q 016933 276 I-----D-NMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 276 ~-----~-~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
+ . ...++++.|+|+ +.++.+..-.
T Consensus 242 pgakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred cCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 1 1 366889999997 9999887654
No 168
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.73 E-value=0.024 Score=48.20 Aligned_cols=100 Identities=19% Similarity=0.164 Sum_probs=62.0
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceE-ecCCCCCccHHHHHHHHhCC-Cc
Q 016933 190 VAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNG-GV 266 (380)
Q Consensus 190 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vi~~~~~~~~~~~~~~lG~~~v-i~~~~~~~~~~~~~~~~~~~-~~ 266 (380)
...+++|++||.+|+|.-+. +..+++.. +..+|++++.++.+ +..++..+ .+..+. ...+.+.+..+. ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~--~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDE--EVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCCh--hHHHHHHHHhCCCCc
Confidence 35578999999999875444 44444443 44489999998864 11233322 122222 244455554444 79
Q ss_pred cEEEE-c----ccC------------hhhHHHHHHHhhcCCcEEEEEc
Q 016933 267 DRSVE-C----TGN------------IDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 267 d~v~d-~----~g~------------~~~~~~~~~~l~~~~G~~v~~g 297 (380)
|+|+. . .|. ...+..+.+.|+++ |++++..
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99995 2 121 24677889999997 9988754
No 169
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.036 Score=48.70 Aligned_cols=79 Identities=22% Similarity=0.344 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC---ceEe--cCCCCCccHHHHHHHHhC--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---TDFV--NTSEHDRPIQEVIAEMTN--GG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~---~~vi--~~~~~~~~~~~~~~~~~~--~~ 265 (380)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++.. -+.+ |..+. ..+.+.+++... ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence 3688999997 9999998888877899 899998888765444 33321 1122 22221 123333333321 37
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 170
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.68 E-value=0.021 Score=49.58 Aligned_cols=101 Identities=25% Similarity=0.311 Sum_probs=69.0
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceE--ecCCCCCccHHHHHH
Q 016933 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIA 259 (380)
Q Consensus 187 l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vi~~~~~~~~~~~~~~----lG~~~v--i~~~~~~~~~~~~~~ 259 (380)
+.....++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.+++ .|...+ +.-+... .+
T Consensus 68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~-~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL-GY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc-CC-----
Confidence 3456678999999999876 37778888887753 389999999988776655 454322 2111110 01
Q ss_pred HHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEE
Q 016933 260 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 260 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 296 (380)
...+.||+|+-..........+.+.|+++ |++++.
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01237999976655556778899999997 998764
No 171
>PRK04148 hypothetical protein; Provisional
Probab=96.64 E-value=0.059 Score=42.68 Aligned_cols=90 Identities=20% Similarity=0.237 Sum_probs=64.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEec-CCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~-~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
.++.+++++|.| .|...+..+...|. .|++++.+++..+.+++.+.+.+.+ .-+++..+ -+++|+|+..
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~--------y~~a~liysi 84 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEI--------YKNAKLIYSI 84 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHH--------HhcCCEEEEe
Confidence 456789999998 78644444456898 9999999999999999988765542 22222112 1278999999
Q ss_pred ccChhhHHHHHHHhhcCCcEEE
Q 016933 273 TGNIDNMISAFECVHDGWGVAV 294 (380)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~~v 294 (380)
-..++....+++..+.- +.-.
T Consensus 85 rpp~el~~~~~~la~~~-~~~~ 105 (134)
T PRK04148 85 RPPRDLQPFILELAKKI-NVPL 105 (134)
T ss_pred CCCHHHHHHHHHHHHHc-CCCE
Confidence 88878777777777774 4433
No 172
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.64 E-value=0.0058 Score=55.10 Aligned_cols=102 Identities=24% Similarity=0.275 Sum_probs=63.4
Q ss_pred hhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-E-ecCCCCCccHHHHHH
Q 016933 186 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F-VNTSEHDRPIQEVIA 259 (380)
Q Consensus 186 ~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-v-i~~~~~~~~~~~~~~ 259 (380)
.+.+.+++++|++||-+|+| -|.+++.+|+..|+ +|++++.|++..+.+++ .|... + +...+ + +
T Consensus 53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D----~----~ 122 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD----Y----R 122 (273)
T ss_dssp HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----G
T ss_pred HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee----c----c
Confidence 34678899999999999987 57778889998899 99999999998887754 55422 1 11111 1 1
Q ss_pred HHhCCCccEEEE-----cccC---hhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 260 EMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 260 ~~~~~~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
++ .+.||.|+. .+|. +..+..+.+.|+|+ |++++-...
T Consensus 123 ~~-~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i~ 168 (273)
T PF02353_consen 123 DL-PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTIT 168 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEEE
T ss_pred cc-CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEecc
Confidence 11 127888765 3443 24588899999997 998765443
No 173
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.019 Score=50.65 Aligned_cols=77 Identities=26% Similarity=0.462 Sum_probs=52.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceE-ecCCCCCccHHHHHHHHhCCCccEEEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~v-i~~~~~~~~~~~~~~~~~~~~~d~v~d 271 (380)
++++++|+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+...+ .|..+.+ .+.+.+.. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDA-AIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH-HHHHHHHH--hCCCCEEEE
Confidence 4678999997 9999999999998999 89999898877655543 454332 2333321 12222222 236899999
Q ss_pred cccC
Q 016933 272 CTGN 275 (380)
Q Consensus 272 ~~g~ 275 (380)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9874
No 174
>PRK08017 oxidoreductase; Provisional
Probab=96.62 E-value=0.015 Score=51.75 Aligned_cols=78 Identities=18% Similarity=0.304 Sum_probs=55.5
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE-ecCCCCC--ccHHHHHHHHhCCCccEEEEc
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v-i~~~~~~--~~~~~~~~~~~~~~~d~v~d~ 272 (380)
+++||+|+ |.+|...++.+...|+ +|++++++.++.+.+++.+++.+ .|..+.+ .++.+.+.....+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999998 9999999999988899 89999999998888887776543 3433321 112233333333578999988
Q ss_pred ccC
Q 016933 273 TGN 275 (380)
Q Consensus 273 ~g~ 275 (380)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 763
No 175
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.61 E-value=0.059 Score=53.34 Aligned_cols=105 Identities=17% Similarity=0.180 Sum_probs=66.7
Q ss_pred hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---------cCCc-----eE--ecCCCCC
Q 016933 189 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---------FGVT-----DF--VNTSEHD 251 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~---------lG~~-----~v--i~~~~~~ 251 (380)
...+.+.|++|||+|+ |.+|...+..+...|+ +|+++.++.++.+.+.+ .|.. .+ .|..+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-- 149 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-- 149 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence 4556778999999998 9999999988888899 89888898887654322 1211 12 23322
Q ss_pred ccHHHHHHHHhCCCccEEEEcccChh---------------hHHHHHHHhhcC-CcEEEEEcCCC
Q 016933 252 RPIQEVIAEMTNGGVDRSVECTGNID---------------NMISAFECVHDG-WGVAVLVGVPS 300 (380)
Q Consensus 252 ~~~~~~~~~~~~~~~d~v~d~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~~ 300 (380)
. +.+.+.. +++|+||+++|... ....+++.+... .++||+++...
T Consensus 150 --~-esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 --P-DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred --H-HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 1 2233333 36899999987531 122334444332 26888887653
No 176
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.60 E-value=0.027 Score=50.89 Aligned_cols=100 Identities=25% Similarity=0.326 Sum_probs=63.3
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHhCCCccE
Q 016933 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (380)
Q Consensus 193 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~ 268 (380)
+++|.++|=+|+| .|.++|..+| +|+.+|++++.++-..+.+++ -+.+... ... .........++.+|+
T Consensus 160 ~~~g~~vlDvGcG-SGILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~-~~~----~~~~~~~~~~~~~Dv 232 (300)
T COG2264 160 LKKGKTVLDVGCG-SGILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLV-QAK----GFLLLEVPENGPFDV 232 (300)
T ss_pred hcCCCEEEEecCC-hhHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhh-hcc----cccchhhcccCcccE
Confidence 5688888888875 3666666555 788899999999977766655 2332100 000 001111122347999
Q ss_pred EEEcccCh---hhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 269 SVECTGNI---DNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 269 v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
|+-.+=.. .+......+++|+ |++++.|...
T Consensus 233 IVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 233 IVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred EEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 88654221 3466788889997 9999998754
No 177
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.60 E-value=0.018 Score=51.27 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=55.6
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCce-E--ecCCCCCccHHHHHHH-HhC
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-F--VNTSEHDRPIQEVIAE-MTN 263 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-----lG~~~-v--i~~~~~~~~~~~~~~~-~~~ 263 (380)
..+.++||+|| +++|...+......|+ .++.+.|+++|++.+.+ .|... + +|..+.+ -.+.+.. +..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~--~~~~l~~~l~~ 80 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE--ALERLEDELKE 80 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh--HHHHHHHHHHh
Confidence 46789999998 9999998888888899 89999999999877754 22221 3 3444433 2233332 222
Q ss_pred C--CccEEEEcccC
Q 016933 264 G--GVDRSVECTGN 275 (380)
Q Consensus 264 ~--~~d~v~d~~g~ 275 (380)
. .+|+.++++|-
T Consensus 81 ~~~~IdvLVNNAG~ 94 (265)
T COG0300 81 RGGPIDVLVNNAGF 94 (265)
T ss_pred cCCcccEEEECCCc
Confidence 2 79999999985
No 178
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.58 E-value=0.029 Score=43.68 Aligned_cols=101 Identities=19% Similarity=0.331 Sum_probs=67.1
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceE--ecCCCCCccHHHHHHHHh
Q 016933 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMT 262 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~v--i~~~~~~~~~~~~~~~~~ 262 (380)
....+.+++++|-+|+|. |..+..+++..+..+|++++.++...+.+++ ++...+ +..+... . ... .
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~---~~~-~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPE--A---LED-S 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccc--c---Chh-h
Confidence 344567788888899876 8888899988754499999999988877654 444322 2111110 0 111 1
Q ss_pred CCCccEEEEcccC---hhhHHHHHHHhhcCCcEEEEEc
Q 016933 263 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 263 ~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g 297 (380)
.+.+|+|+-..+. ...+..+.+.|+++ |.+++..
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 2379999875432 24688899999997 9988653
No 179
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.56 E-value=0.1 Score=44.98 Aligned_cols=116 Identities=18% Similarity=0.131 Sum_probs=69.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChh-HHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~-~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
.|++|||+|+|.+|..-+..+...|+ .|++++.... ....+.+.|--..+ ..+... . .+ .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~~---~---dl--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARCFDA---D---IL--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCCCCH---H---Hh--CCcEEEEECC
Confidence 46799999999999999999999999 8888865432 33333333311111 112110 1 11 3689999999
Q ss_pred cChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEee
Q 016933 274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 321 (380)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 321 (380)
+.++.-.......+.. |..+.+........+.++..--...+++--+
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeEEEcCCEEEEEE
Confidence 9865555666666664 7777655544344455443322244555433
No 180
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.55 E-value=0.038 Score=45.21 Aligned_cols=92 Identities=28% Similarity=0.321 Sum_probs=60.4
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 193 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
.-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+.--|.. +.. +.+.+ ...|++|.+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~~-------~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VMT-------LEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ecC-------HHHHH-----hhCCEEEEC
Confidence 4578999999999999999999999999 999999999776666556654 221 22222 257999999
Q ss_pred ccChhh-HHHHHHHhhcCCcEEEEEcCC
Q 016933 273 TGNIDN-MISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 273 ~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 299 (380)
+|..+. ..+-++.|+++ -.+..+|..
T Consensus 86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred CCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 998664 45778888885 555555544
No 181
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.018 Score=50.24 Aligned_cols=77 Identities=9% Similarity=0.181 Sum_probs=51.6
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE--ecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v--i~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
++++|+|+ |.+|...+......|+ +|+++++++++.+.+++++-..+ .|..+. ..+.+.++.+..+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDP-ASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCH-HHHHHHHHHhhcCCCCEEEEcC
Confidence 46899997 9999998887778899 89999998877766655433222 232222 1233334444334799999987
Q ss_pred cC
Q 016933 274 GN 275 (380)
Q Consensus 274 g~ 275 (380)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
No 182
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.53 E-value=0.092 Score=45.13 Aligned_cols=114 Identities=11% Similarity=-0.015 Sum_probs=64.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChh-H-HHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-R-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~-~-~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
.|.+|||+|+|.+|...+..+...|+ +|++++.... . .+++.+ +. ..+...... + ..-.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~~~----~----~~l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK-IRWKQKEFE----P----SDIVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC-EEEEecCCC----h----hhcCCceEEEEc
Confidence 46899999999999998888888898 8888865431 2 222222 21 111111111 0 001268999999
Q ss_pred ccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEee
Q 016933 273 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 321 (380)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 321 (380)
++.+ .++..+...... +.++.+........+.++...-...+++--+
T Consensus 78 T~d~-elN~~i~~~a~~-~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIs 124 (202)
T PRK06718 78 TNDP-RVNEQVKEDLPE-NALFNVITDAESGNVVFPSALHRGKLTISVS 124 (202)
T ss_pred CCCH-HHHHHHHHHHHh-CCcEEECCCCccCeEEEeeEEEcCCeEEEEE
Confidence 9985 445555555454 6666665544344454443322244555443
No 183
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.50 E-value=0.0094 Score=45.67 Aligned_cols=94 Identities=23% Similarity=0.262 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHHHhcC----C-ceEecCCCCCccHHHHHHHHhCCCccE
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFG----V-TDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~-~g~~~vi~~~~~~~~~~~~~~lG----~-~~vi~~~~~~~~~~~~~~~~~~~~~d~ 268 (380)
|+++||-+|+|. |.+++.+++. .++ +|++++.+++..+.+++.- . +.+- ....+ + . ......++||+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~-~~~~d--~-~-~~~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRIT-FVQGD--A-E-FDPDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEE-EEESC--C-H-GGTTTSSCEEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeE-EEECc--c-c-cCcccCCCCCE
Confidence 678999999864 7788888884 677 8999999999888887632 2 2221 11111 2 0 01111237999
Q ss_pred EEEcc-cC---hh------hHHHHHHHhhcCCcEEEEE
Q 016933 269 SVECT-GN---ID------NMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 269 v~d~~-g~---~~------~~~~~~~~l~~~~G~~v~~ 296 (380)
|+... .. .. .+..+.+.|+|+ |++++-
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 98876 22 12 378899999997 998753
No 184
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.47 E-value=0.025 Score=48.76 Aligned_cols=100 Identities=17% Similarity=0.210 Sum_probs=66.9
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCc---eEecCCCCCccHHHHHH
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIA 259 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vi~~~~~~~~~~~~~~----lG~~---~vi~~~~~~~~~~~~~~ 259 (380)
.+...++++++||=+|+|. |..++.+++..+ ..+|++++.+++-.+.+++ .|.. .++..+-. +.+.
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~-----~~~~ 138 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGK-----RGLE 138 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcc-----cCCc
Confidence 4556778999999998763 777788888764 2389999999987766654 4432 12221111 1011
Q ss_pred HHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEE
Q 016933 260 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 260 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 296 (380)
..+.||+|+-..........+.+.|+++ |+++..
T Consensus 139 --~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 139 --KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred --cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1237999987766556667888999997 998764
No 185
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.46 E-value=0.014 Score=55.88 Aligned_cols=76 Identities=11% Similarity=0.172 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
-.+.++||+|+|.+|.+++..+...|+..++++.++.+|.+.+ .+++...++. + +.+.+.. ..+|+||.|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHHh-ccCCEEEEC
Confidence 4578999999999999999999999987899999998775554 4455212322 2 2222222 258999999
Q ss_pred ccChhh
Q 016933 273 TGNIDN 278 (380)
Q Consensus 273 ~g~~~~ 278 (380)
++.+..
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998654
No 186
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.46 E-value=0.037 Score=52.02 Aligned_cols=95 Identities=18% Similarity=0.245 Sum_probs=64.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC---Cc-eEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---VT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG---~~-~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
.+|||+|+|.+|+.+++.+-+.|..+|+..+++.++.+.+.+.. .. ..+|..+.+ ++.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~-----al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD-----ALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChH-----HHHHHHh-cCCEEEEe
Confidence 57999999999999999988888459999999999998887764 21 234444422 2333333 35999999
Q ss_pred ccChhhHHHHHHHhhcCCcEEEEEcC
Q 016933 273 TGNIDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
.........+-.|++.+ -.++....
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~ 100 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSY 100 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEccc
Confidence 98755554444555553 44554444
No 187
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.018 Score=53.66 Aligned_cols=79 Identities=23% Similarity=0.405 Sum_probs=53.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E--ecCCCCC--ccHHHHHHHHhCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v--i~~~~~~--~~~~~~~~~~~~~ 264 (380)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+. + .|..+.+ ..+.+.+.+. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF-GG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh-cC
Confidence 4689999998 9999999999988999 898998988876543 3456543 2 2333322 1122222222 24
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 188
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.43 E-value=0.025 Score=50.84 Aligned_cols=106 Identities=22% Similarity=0.313 Sum_probs=66.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E----ecCCCCCccHHHHHHHHh--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F----VNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v----i~~~~~~~~~~~~~~~~~-- 262 (380)
.++.|+|+|| +++|.+.+.-.-..|+ +++.+.+..++++.+ ++.+... + .|..+.+ ...+.+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~-~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEE-SVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHH-HHHHHHHHHHHh
Confidence 5689999998 8999887766667898 666666777666555 4455433 2 2333322 1222222211
Q ss_pred CCCccEEEEcccCh-------------------------hhHHHHHHHhhcCC-cEEEEEcCCCCC
Q 016933 263 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGW-GVAVLVGVPSKD 302 (380)
Q Consensus 263 ~~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~g~~~~~ 302 (380)
-+++|+.++..|-. .....++..|++.. |+|+.++...+-
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 24799999988742 23456666776644 899998876543
No 189
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.42 E-value=0.025 Score=55.73 Aligned_cols=73 Identities=25% Similarity=0.222 Sum_probs=54.9
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 193 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
+.++++|+|+|.|..|++++.+++..|+ +|++.+..+.+.+.++++|+..+. .... .+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~~~----~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TSDA----VQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Ccch----HhHh-----hcCCEEEEC
Confidence 5578999999999999999999999999 899999877777777778874432 2111 1111 147999999
Q ss_pred ccCh
Q 016933 273 TGNI 276 (380)
Q Consensus 273 ~g~~ 276 (380)
.|.+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 8875
No 190
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.42 E-value=0.038 Score=45.87 Aligned_cols=97 Identities=20% Similarity=0.200 Sum_probs=62.4
Q ss_pred hhcchhhhhhhhhhhhccCCCCCCeEEEEcCCH-HHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCc
Q 016933 174 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 252 (380)
Q Consensus 174 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~ 252 (380)
...||....+...+.+...--.+++|||+|+|. +|..++..++..|+ +|+++.++.+.
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~-------------------- 80 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN-------------------- 80 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh--------------------
Confidence 344544444444333333345789999999986 59989999988999 78877665211
Q ss_pred cHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 253 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
+.+.++ .+|+||.+++.+..+.. +.++++ -.++.++.+.
T Consensus 81 -l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 81 -LKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred -HHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 222221 48999999999664433 345664 6666776654
No 191
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.38 E-value=0.032 Score=49.91 Aligned_cols=131 Identities=20% Similarity=0.150 Sum_probs=86.9
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCC---------CccHHHHHHH
Q 016933 190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH---------DRPIQEVIAE 260 (380)
Q Consensus 190 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~---------~~~~~~~~~~ 260 (380)
.+...++..+++.|.|..|+.++..++.+|+ .|...+-...+.+..+.+|+...-..++. +.+|...-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3445567788999999999999999999999 88888888888888888998543211211 1234433333
Q ss_pred HhC---CCccEEEEcccCh-----h-hHHHHHHHhhcCCcEEEEEcCCCCCce-eecccccc-ccccEEEeee
Q 016933 261 MTN---GGVDRSVECTGNI-----D-NMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINV-LNERTLKGTF 322 (380)
Q Consensus 261 ~~~---~~~d~v~d~~g~~-----~-~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~ 322 (380)
+.. .++|+||-+.=-| . ....++..++|+ ..++.+....+... ...+.... .+..+|.|..
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 222 2799999886332 1 356899999997 99998876543322 22222112 2677888854
No 192
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.34 E-value=0.053 Score=46.87 Aligned_cols=106 Identities=21% Similarity=0.245 Sum_probs=74.5
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceEe-cCCCCCccHHHHHHHHhC
Q 016933 190 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFV-NTSEHDRPIQEVIAEMTN 263 (380)
Q Consensus 190 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vi~~~~~~~~~~~~~~----lG~~~vi-~~~~~~~~~~~~~~~~~~ 263 (380)
.++.++.++||=+|.+ +|+.++++|..+. -.++++++.++++.+.+++ .|.+..+ -....+ ..+.+.+...
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~~ 130 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLLD 130 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhccC
Confidence 4556677888888753 5889999999886 3389999999999888765 6765522 111122 5666666444
Q ss_pred CCccEEEEccc---ChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 264 GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 264 ~~~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
+.||.||-=.. .++.++.+++.|+++ |.++.-...
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl 168 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVL 168 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeecc
Confidence 58999864333 356799999999997 888766544
No 193
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.032 Score=49.74 Aligned_cols=80 Identities=24% Similarity=0.345 Sum_probs=52.7
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCC-ceEe--cCCCCCccHHHHHHHHh--C
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-TDFV--NTSEHDRPIQEVIAEMT--N 263 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~-~~vi--~~~~~~~~~~~~~~~~~--~ 263 (380)
..++++||+|+ |.+|...+..+...|+ +|+++.++.++.+.+.+ .+. ..++ |..+. ..+.+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhc
Confidence 34789999997 9999999999888999 89999898887654433 122 1222 33222 12333333321 2
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+.+|+++++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999999884
No 194
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.1 Score=46.10 Aligned_cols=79 Identities=24% Similarity=0.278 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-Ee--cCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi--~~~~~~~~~~~~~~~~~~--~ 264 (380)
+++++||+|+ |.+|...+......|+ +|+++++++++.+.+ ++.+... ++ |..+.+ .+.+.+..... +
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA-SVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4688999997 9999999988888899 888888887755433 2234322 22 333221 12222222111 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999885
No 195
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.068 Score=49.91 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=52.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceE---ecCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~v---i~~~~~~~~~~~~~~~~~~--~ 264 (380)
.++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.|.+.. .|..+.+ .+.+.+..... +
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence 4678999997 9999999988888899 888888988776543 33454332 2333321 12222222211 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 196
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.30 E-value=0.099 Score=42.94 Aligned_cols=113 Identities=14% Similarity=0.074 Sum_probs=63.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
.|.+|||+|+|.+|.--++.....|+ .|++++ ++..+.+++++.-. +...... + ..-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~~~----~----~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKTFS----N----DDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecccC----h----hcCCCceEEEECCC
Confidence 46889999999999988888878899 787773 33333444454211 2111111 0 01126899999998
Q ss_pred ChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEee
Q 016933 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 321 (380)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 321 (380)
. +-++..+...... +.++.+........+.++..--...+++--+
T Consensus 80 d-~e~N~~i~~~a~~-~~~vn~~d~~~~~~f~~pa~v~~~~l~iais 124 (157)
T PRK06719 80 Q-HAVNMMVKQAAHD-FQWVNVVSDGTESSFHTPGVIRNDEYVVTIS 124 (157)
T ss_pred C-HHHHHHHHHHHHH-CCcEEECCCCCcCcEEeeeEEEECCeEEEEE
Confidence 8 4456555555554 4344443333233444333211234444433
No 197
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.033 Score=49.62 Aligned_cols=79 Identities=20% Similarity=0.292 Sum_probs=52.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceE-ecCCCCCccHHHHHHHHh--CCCccEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS 269 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~v 269 (380)
+++++||+|+ |.+|...++.....|+ +|+.+++++.+.+.+ .+++...+ .|..+.+ .+.+.+.... .+++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 4689999998 9999999998888899 898888887765544 44544222 2333321 1222232221 1368999
Q ss_pred EEcccC
Q 016933 270 VECTGN 275 (380)
Q Consensus 270 ~d~~g~ 275 (380)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 198
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.28 E-value=0.064 Score=52.28 Aligned_cols=79 Identities=24% Similarity=0.376 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCCh--hHH-HHHHhcCCceE-ecCCCCCccHHHHHHHHh--CCCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRF-EEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~--~~~-~~~~~lG~~~v-i~~~~~~~~~~~~~~~~~--~~~~d 267 (380)
+++++||+|+ |.+|...++.+...|+ +|+.++++. ++. +..++++...+ .|..+.+ ...+.+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCCC
Confidence 5789999997 9999999998888899 888887643 222 33344565332 3443322 1222222221 23699
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
++|++.|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999883
No 199
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.031 Score=49.04 Aligned_cols=79 Identities=22% Similarity=0.310 Sum_probs=49.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH-H---HHhcCCceE-ecCCCCCccHHHHHHHHhC--CCc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-E---AKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGV 266 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~-~---~~~lG~~~v-i~~~~~~~~~~~~~~~~~~--~~~ 266 (380)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.. . ++..+...+ .|..+. ..+.+.+..... +++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP-QAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH-HHHHHHHHHHHHHhCCc
Confidence 3689999997 9999998888888899 8999988765532 2 222333322 222221 112222222211 379
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|+++++.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998874
No 200
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.23 E-value=0.025 Score=55.43 Aligned_cols=79 Identities=27% Similarity=0.357 Sum_probs=56.4
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh---------------------hHHHHHHhcCCceEecCCCCCc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR 252 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~---------------------~~~~~~~~lG~~~vi~~~~~~~ 252 (380)
..+++|+|+|+|..|+.++..++..|+ .|+.++..+ ...++++++|++..++......
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 217 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD 217 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc
Confidence 367899999999999999999999999 788886553 3467788899876555422110
Q ss_pred cHHHHHHHHhCCCccEEEEcccChh
Q 016933 253 PIQEVIAEMTNGGVDRSVECTGNID 277 (380)
Q Consensus 253 ~~~~~~~~~~~~~~d~v~d~~g~~~ 277 (380)
+ .+.... .++|.||.++|...
T Consensus 218 -~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 -I--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred -c--CHHHHH-hcCCEEEEEeCCCC
Confidence 1 111222 26999999999753
No 201
>PRK14967 putative methyltransferase; Provisional
Probab=96.22 E-value=0.28 Score=42.89 Aligned_cols=97 Identities=23% Similarity=0.172 Sum_probs=62.8
Q ss_pred ccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHhCCC
Q 016933 190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG 265 (380)
Q Consensus 190 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~~~~ 265 (380)
...++++++||-.|+|. |..++.+++. ++.+|++++.+++..+.+++ .+....+...+ +.+. ...+.
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d----~~~~---~~~~~ 101 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGD----WARA---VEFRP 101 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECc----hhhh---ccCCC
Confidence 34577889999999876 8888888875 55589999999988876654 34322221111 2221 12247
Q ss_pred ccEEEEcccC---------------------------hhhHHHHHHHhhcCCcEEEEE
Q 016933 266 VDRSVECTGN---------------------------IDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 266 ~d~v~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~ 296 (380)
+|+|+..... ...+..+.+.|+++ |+++++
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 9998864210 01345677888997 998865
No 202
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.091 Score=47.02 Aligned_cols=79 Identities=25% Similarity=0.310 Sum_probs=51.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-E--ecCCCCCccHHHHHHHHh--CCCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d 267 (380)
.++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++++... + .|..+.+ .+.+.+.... -+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDA-AIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4679999997 9999998888888899 899998988765444 4455321 2 2333321 1223232221 13689
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+++++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998874
No 203
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.086 Score=46.64 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=59.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh-HHHH----HHhcCCce-E--ecCCCCCccHHHHHHHHhC--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN-- 263 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~-~~~~----~~~lG~~~-v--i~~~~~~~~~~~~~~~~~~-- 263 (380)
+++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+. ++..+... . .|..+.+ .+.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEE-SVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhC
Confidence 3578999997 9999999888888899 7888777543 3322 22233321 2 2333221 23333333222
Q ss_pred CCccEEEEcccCh-------------------hhHHHHHHHhhcCCcEEEEEcC
Q 016933 264 GGVDRSVECTGNI-------------------DNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 264 ~~~d~v~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
+++|+++.+.|.. ..+..+.+.+... |+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689999887642 1234444444554 78887765
No 204
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.13 Score=45.98 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=51.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cC-Cc-e--EecCCCCCccHHHHHHHHh---CCCcc
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VT-D--FVNTSEHDRPIQEVIAEMT---NGGVD 267 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG-~~-~--vi~~~~~~~~~~~~~~~~~---~~~~d 267 (380)
+++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ ++ .. . ..|..+.+ .+.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence 47999997 9999999888888899 89999898887765544 32 11 1 23443322 2333333321 34799
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999885
No 205
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.17 E-value=0.049 Score=41.23 Aligned_cols=95 Identities=22% Similarity=0.245 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
.|.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +.-... ... +.+. -.++++||-+.+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~~----~~~~-----l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RRE----FEED-----LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ESS-----GGG-----CTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hhh----HHHH-----HhhheEEEecCC
Confidence 46899999999999999999999999 888887765 2222 111111 111 2110 126899999999
Q ss_pred ChhhHHHHHHHhhcCCcEEEEEcCCCCCceee
Q 016933 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFM 306 (380)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 306 (380)
.+..-....+..+.. |..+.+........|.
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF~ 100 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELCDFI 100 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCCSEE
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCCeEE
Confidence 866666666666665 8888887755444443
No 206
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.16 E-value=0.016 Score=52.21 Aligned_cols=45 Identities=36% Similarity=0.425 Sum_probs=40.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~ 238 (380)
.++++++|+|+|+.+.+++.-++..|+.+++++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 468999999999999999999999998799999999998776655
No 207
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.045 Score=49.02 Aligned_cols=81 Identities=26% Similarity=0.356 Sum_probs=52.4
Q ss_pred CCCCCeEEEEcC-C-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCceE--e--cCCCCCccHHHHHHHH
Q 016933 193 PERGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF--V--NTSEHDRPIQEVIAEM 261 (380)
Q Consensus 193 ~~~g~~vlI~G~-g-~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-----lG~~~v--i--~~~~~~~~~~~~~~~~ 261 (380)
+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...+ +|...+ + |..+.+ .+.+.+...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA-QVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH-HHHHHHHHH
Confidence 445789999987 6 799999999999999 78888888776554432 443222 2 332221 122222222
Q ss_pred h--CCCccEEEEcccC
Q 016933 262 T--NGGVDRSVECTGN 275 (380)
Q Consensus 262 ~--~~~~d~v~d~~g~ 275 (380)
. .+++|++|++.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 1478999999984
No 208
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.13 E-value=0.12 Score=46.35 Aligned_cols=106 Identities=24% Similarity=0.306 Sum_probs=76.6
Q ss_pred hhhhhhhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-e--Ee--cCCCCCc
Q 016933 182 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FV--NTSEHDR 252 (380)
Q Consensus 182 ta~~~l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~-~--vi--~~~~~~~ 252 (380)
.++..+.+..++++|++||=+|+|- |.+++.+|+..|+ +|++++-|++..+.+++ .|.. . +. |+.+.
T Consensus 59 ~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~-- 134 (283)
T COG2230 59 AKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDF-- 134 (283)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccccc--
Confidence 3444567889999999999999864 7778899999999 99999999998877765 6654 1 11 22221
Q ss_pred cHHHHHHHHhCCCccEEE-----EcccC---hhhHHHHHHHhhcCCcEEEEEcCCCCC
Q 016933 253 PIQEVIAEMTNGGVDRSV-----ECTGN---IDNMISAFECVHDGWGVAVLVGVPSKD 302 (380)
Q Consensus 253 ~~~~~~~~~~~~~~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~ 302 (380)
.+.||-|+ +.+|. +..+..+-+.|+++ |++.+...+...
T Consensus 135 ----------~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 135 ----------EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred ----------ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 12366654 34554 35688999999997 999988776544
No 209
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.13 E-value=0.05 Score=49.47 Aligned_cols=43 Identities=23% Similarity=0.245 Sum_probs=37.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 237 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~ 237 (380)
.+++++|+|+|++|.+++..+...|+++|++++++.+|.+.+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 4688999999999999999999999988999999988876554
No 210
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.046 Score=47.61 Aligned_cols=77 Identities=16% Similarity=0.302 Sum_probs=52.5
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-EecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~-vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
++++|+|+ |.+|...++.+...|+ +|+.++++.++.+.++..+... ..|..+.+ .+.+.+.....+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence 46899987 9999988887777799 8999989888877777666542 23333322 2333333333337999999887
Q ss_pred C
Q 016933 275 N 275 (380)
Q Consensus 275 ~ 275 (380)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 211
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.12 E-value=0.051 Score=46.06 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=61.6
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHhCCCccE
Q 016933 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (380)
Q Consensus 193 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~ 268 (380)
++++.+||-+|+| .|..++.+++.....+|++++.+++..+.+++ .+.+.+ .....+ ..+ +.. .+.+|+
T Consensus 43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d--~~~-~~~--~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGR--AEE-FGQ--EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEecc--Hhh-CCC--CCCccE
Confidence 4568889988875 25666666665533399999999987776654 454332 111111 111 111 337999
Q ss_pred EEEcccC--hhhHHHHHHHhhcCCcEEEEEc
Q 016933 269 SVECTGN--IDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 269 v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g 297 (380)
|+-.... ...+..+.+.|+++ |+++.+-
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 9864322 35677889999997 9988773
No 212
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.12 E-value=0.092 Score=45.05 Aligned_cols=82 Identities=29% Similarity=0.306 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
-.|++++|.|.|.+|..+++.+...|+ +|++++++.++.+.+++ +|+. .++..+ + ....+|+++-|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~----l-------~~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE----I-------YSVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh----h-------ccccCCEEEec
Confidence 357899999999999999999999999 89999999888776655 4653 333211 1 11158888866
Q ss_pred ccChhhHHHHHHHhhc
Q 016933 273 TGNIDNMISAFECVHD 288 (380)
Q Consensus 273 ~g~~~~~~~~~~~l~~ 288 (380)
..........++.++.
T Consensus 93 A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 93 ALGGVINDDTIPQLKA 108 (200)
T ss_pred ccccccCHHHHHHcCC
Confidence 5543444555566654
No 213
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.11 E-value=0.048 Score=50.60 Aligned_cols=80 Identities=20% Similarity=0.209 Sum_probs=52.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cC-Cc---eEecCCCCCccHHHHHHHHhCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FG-VT---DFVNTSEHDRPIQEVIAEMTNG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-----lG-~~---~vi~~~~~~~~~~~~~~~~~~~ 264 (380)
.|++++|+|+ +++|.+.+......|+ +|+.+++++++.+.+.+ .+ .. ...|..+...+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5889999998 9999987777777899 89999999988765432 12 11 1234443212234445544444
Q ss_pred -CccEEEEcccC
Q 016933 265 -GVDRSVECTGN 275 (380)
Q Consensus 265 -~~d~v~d~~g~ 275 (380)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 56799998763
No 214
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.041 Score=49.31 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=50.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eE--ecCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~-~v--i~~~~~~~~~~~~~~~~~~--~ 264 (380)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+.. .+ .|..+.+ .+.+.+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4789999997 8999999988888899 89999898876554332 2322 12 2333221 12222222211 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999999873
No 215
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.07 E-value=0.032 Score=56.95 Aligned_cols=76 Identities=28% Similarity=0.340 Sum_probs=56.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChh---------------------HHHHHHhcCCceEecCCCC-Cc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-DR 252 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~---------------------~~~~~~~lG~~~vi~~~~~-~~ 252 (380)
.+++|+|+|+|..|+.+++.++..|+ +|+++++.+. +.++++++|++..++..-. +-
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888876652 5677888998776655321 11
Q ss_pred cHHHHHHHHhCCCccEEEEcccCh
Q 016933 253 PIQEVIAEMTNGGVDRSVECTGNI 276 (380)
Q Consensus 253 ~~~~~~~~~~~~~~d~v~d~~g~~ 276 (380)
.+ ..+. .++|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 12 2222 2699999999973
No 216
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.06 E-value=0.066 Score=46.52 Aligned_cols=102 Identities=20% Similarity=0.267 Sum_probs=66.4
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHh
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 262 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~ 262 (380)
.....++++++||=+|+|. |..++.+++..+. .+|++++.+++..+.+++ .|.+.+.-. ..+ ..+... .
T Consensus 70 ~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~-~~d--~~~~~~--~ 143 (215)
T TIGR00080 70 TELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVI-VGD--GTQGWE--P 143 (215)
T ss_pred HHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEE-ECC--cccCCc--c
Confidence 4556788999999998763 6777788887653 369999999987776654 454332111 111 111000 1
Q ss_pred CCCccEEEEcccChhhHHHHHHHhhcCCcEEEEE
Q 016933 263 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 263 ~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 296 (380)
.+.||+|+-..........+.+.|+++ |++++.
T Consensus 144 ~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 144 LAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred cCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 237999876554546677888999997 998764
No 217
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.05 E-value=0.069 Score=45.92 Aligned_cols=34 Identities=35% Similarity=0.390 Sum_probs=30.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
..+|+|+|+|++|...++.+...|+++++.++.+
T Consensus 21 ~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 21 NSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 4789999999999999999999999899999876
No 218
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.03 E-value=0.045 Score=49.00 Aligned_cols=78 Identities=24% Similarity=0.300 Sum_probs=51.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCce-E--ecCCCCCccHHHHHHHHhC--CCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l-G~~~-v--i~~~~~~~~~~~~~~~~~~--~~~d 267 (380)
++++++|+|+ |.+|...++.....|+ +|+.++++.++.+.+++. +... . .|..+.+ ...+.+++... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLD-DHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence 4689999997 9999999888888899 899998988777666553 3211 1 2332221 13333333221 3689
Q ss_pred EEEEccc
Q 016933 268 RSVECTG 274 (380)
Q Consensus 268 ~v~d~~g 274 (380)
+++++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999986
No 219
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.02 E-value=0.031 Score=50.81 Aligned_cols=75 Identities=13% Similarity=0.064 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-EecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~-vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
++++++|+|+|+.+.+++..+..+|+.+|+++.|+.+|.+.+.+ ++... +.... +.+.+.... ..+|+|++|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence 57889999999999999999999999889999999887766543 33211 11111 001111111 368999999
Q ss_pred ccC
Q 016933 273 TGN 275 (380)
Q Consensus 273 ~g~ 275 (380)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 875
No 220
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.01 E-value=0.019 Score=55.96 Aligned_cols=94 Identities=11% Similarity=0.110 Sum_probs=61.2
Q ss_pred hhccCCCCCCeEE----EEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eEecCCCCCccHHHHHHHH
Q 016933 188 LNVAKPERGSSVA----VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEM 261 (380)
Q Consensus 188 ~~~~~~~~g~~vl----I~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~-~vi~~~~~~~~~~~~~~~~ 261 (380)
....++++|+.+| |+|+ |++|.+++|+++..|+ .|+++...+.+....+..+.+ .++|..... +.+.+...
T Consensus 26 ~~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~l~~~ 102 (450)
T PRK08261 26 VPLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGIT--DPADLKAL 102 (450)
T ss_pred ccccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCC--CHHHHHHH
Confidence 3456778888887 7765 9999999999999999 888886666644444444554 345544322 23333322
Q ss_pred hCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 262 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 262 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
. ..+...++.+.++ |+++.++..
T Consensus 103 ~--------------~~~~~~l~~l~~~-griv~i~s~ 125 (450)
T PRK08261 103 Y--------------EFFHPVLRSLAPC-GRVVVLGRP 125 (450)
T ss_pred H--------------HHHHHHHHhccCC-CEEEEEccc
Confidence 1 3455566777775 777777654
No 221
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.034 Score=50.92 Aligned_cols=79 Identities=23% Similarity=0.323 Sum_probs=53.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC--ceE---ecCCCCCccHHHHHHHHh--CCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDF---VNTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~--~~v---i~~~~~~~~~~~~~~~~~--~~~ 265 (380)
+++++||+|+ |++|...++.....|+ +|+.+++++++.+.+ ++++. ... .|..+.+ .+.+.+.+.. -++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence 5789999997 9999999999988999 899998988876554 44542 111 3333321 1223333222 147
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 222
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.037 Score=49.45 Aligned_cols=80 Identities=25% Similarity=0.246 Sum_probs=52.5
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-c--eEe--cCCCCCccHHHHHHHHh--CCC
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-T--DFV--NTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~-~--~vi--~~~~~~~~~~~~~~~~~--~~~ 265 (380)
-++.++||+|+ |.+|...+..+...|+ +|+.++++++..+.+.+... . .++ |..+.+ .+.+.+.+.. -++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPA-QVERVFDTAVERFGG 86 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH-HHHHHHHHHHHHhCC
Confidence 46789999997 9999999998888899 79999888776665544221 1 222 332221 1222222221 137
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+||.+.|.
T Consensus 87 ~d~vi~~ag~ 96 (264)
T PRK12829 87 LDVLVNNAGI 96 (264)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 223
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.00 E-value=0.023 Score=47.07 Aligned_cols=92 Identities=18% Similarity=0.320 Sum_probs=61.2
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--ceEecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 198 ~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~--~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
+|.|+|+ |.+|...++=|+..|. .|+++.++++|....+..-+ ..+++... +++.. .++|+||++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~--------~a~~l-~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS--------LASDL-AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh--------hHhhh-cCCceEEEecc
Confidence 5889998 9999999999999999 99999999998865433211 01222111 11111 27999999988
Q ss_pred Ch--h-------hHHHHHHHhhc-CCcEEEEEcCC
Q 016933 275 NI--D-------NMISAFECVHD-GWGVAVLVGVP 299 (380)
Q Consensus 275 ~~--~-------~~~~~~~~l~~-~~G~~v~~g~~ 299 (380)
.. + ..+.++..++. +.-|+..+|..
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 64 1 23346666666 22477777764
No 224
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.99 E-value=0.071 Score=48.09 Aligned_cols=95 Identities=20% Similarity=0.251 Sum_probs=64.0
Q ss_pred hcchhhhhhhhhhhhccC-CCCCCeEEEEcCCH-HHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCc
Q 016933 175 ILSCGVSTGLGATLNVAK-PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 252 (380)
Q Consensus 175 ~l~~~~~ta~~~l~~~~~-~~~g~~vlI~G~g~-~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~ 252 (380)
.+||+....+.. ++... --.|++++|+|.|. +|..++.++...|+ +|++..+....
T Consensus 137 ~~PcTp~ai~~l-l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~-------------------- 194 (286)
T PRK14175 137 FVPCTPLGIMEI-LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKD-------------------- 194 (286)
T ss_pred CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchh--------------------
Confidence 355544444443 33333 34789999999855 99999999999999 88877543210
Q ss_pred cHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 253 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
+.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|...
T Consensus 195 -l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 195 -MASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred -HHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 222221 48999999999776665 457886 7788888754
No 225
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.99 E-value=0.059 Score=48.23 Aligned_cols=79 Identities=23% Similarity=0.312 Sum_probs=52.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCc-eEe--cCCCCCccHHHHHHHHh--CCCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFV--NTSEHDRPIQEVIAEMT--NGGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~-~vi--~~~~~~~~~~~~~~~~~--~~~~d 267 (380)
+++++||+|+ +.+|...+..+...|+ +|+.+++++++.+.+.+ ++.. .++ |..+.+ .+.+.+.+.. -+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYA-DNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHH-HHHHHHHHHHHhcCCCC
Confidence 4688999997 9999998888888899 89999898887766544 3321 122 322211 1223333322 23799
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+++++.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999873
No 226
>PRK00536 speE spermidine synthase; Provisional
Probab=95.96 E-value=0.029 Score=50.03 Aligned_cols=101 Identities=10% Similarity=-0.048 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEE-EEc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS-VEC 272 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v-~d~ 272 (380)
...++|||+|+|. |.++-.++|+-. +|+.++.+++-.+.++++-...--..+++.-++...+.+...+.+|+| +|+
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 3448999998765 456778888753 899999999999999883221100112222112222333333579996 676
Q ss_pred ccChhhHHHHHHHhhcCCcEEEEEcC
Q 016933 273 TGNIDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
.-.++....+.++|+++ |.++.-..
T Consensus 148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 148 EPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCChHHHHHHHHhcCCC-cEEEECCC
Confidence 66667888999999997 98886644
No 227
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.94 E-value=0.057 Score=48.66 Aligned_cols=70 Identities=23% Similarity=0.138 Sum_probs=50.3
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCCCccHHHHHHHHhCCCccEEE
Q 016933 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 270 (380)
Q Consensus 192 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~ 270 (380)
....+++++|+|+|+.+.+++..++..|+.+|++++|+.+|.+.+.+ ++.. +.+.+ ....+|+|+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence 34455789999999999999999999999889999999988766644 3311 10011 112589999
Q ss_pred EcccC
Q 016933 271 ECTGN 275 (380)
Q Consensus 271 d~~g~ 275 (380)
+|+..
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 99753
No 228
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.87 E-value=0.094 Score=45.91 Aligned_cols=105 Identities=23% Similarity=0.273 Sum_probs=73.5
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHh
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 262 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~ 262 (380)
....++.+|+.|+=.|.| .|.+++.||++.|- ++|+.....++..+.+++ +|....+.....| ..+.. .
T Consensus 87 ~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D--v~~~~---~ 160 (256)
T COG2519 87 VARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD--VREGI---D 160 (256)
T ss_pred HHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc--ccccc---c
Confidence 456789999999877765 48888899998864 599999999888777754 4554322221121 21111 1
Q ss_pred CCCccEE-EEcccChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 263 NGGVDRS-VECTGNIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 263 ~~~~d~v-~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
...+|++ +|.--..+.++.+.+.|+++ |.++++-..
T Consensus 161 ~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~ 197 (256)
T COG2519 161 EEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPT 197 (256)
T ss_pred ccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCC
Confidence 1268876 66666667899999999997 999988654
No 229
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.87 E-value=0.067 Score=50.68 Aligned_cols=97 Identities=24% Similarity=0.232 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~-~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
-.+.++||+|+|-+|.+++......|+.+|++..|+.+|.. +++++|+. ++..++ +.... ..+|+||.+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e--------l~~~l-~~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE--------LLEAL-AEADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH--------HHHhh-hhCCEEEEe
Confidence 46789999999999999999999999889999999988764 56779854 332222 22222 258999999
Q ss_pred ccChhh---HHHHHHHhhcCCc-EEEEEcCCC
Q 016933 273 TGNIDN---MISAFECVHDGWG-VAVLVGVPS 300 (380)
Q Consensus 273 ~g~~~~---~~~~~~~l~~~~G-~~v~~g~~~ 300 (380)
+|.+.. .......+..... -++.++.+.
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 998643 2344455555312 345555543
No 230
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.06 Score=48.69 Aligned_cols=79 Identities=24% Similarity=0.350 Sum_probs=52.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--E--ecCCCCCccHHHHHHHHhC--CCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~--v--i~~~~~~~~~~~~~~~~~~--~~~d 267 (380)
.++++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+..... . .|..+.+ .+.+.++.... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence 3578999997 9999999888888899 8999999988876665533221 2 2333321 12233332221 3689
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999885
No 231
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.079 Score=47.71 Aligned_cols=78 Identities=24% Similarity=0.340 Sum_probs=51.3
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC-Cce-EecCCCCCccHHHHHHHHhC--CCccEE
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDRS 269 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG-~~~-vi~~~~~~~~~~~~~~~~~~--~~~d~v 269 (380)
++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++++ ... ..|..+.+ .+.+.+..... +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 578999997 9999998888878899 788888888776544 3444 222 22433322 23233333221 479999
Q ss_pred EEcccC
Q 016933 270 VECTGN 275 (380)
Q Consensus 270 ~d~~g~ 275 (380)
+++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999874
No 232
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.053 Score=48.22 Aligned_cols=79 Identities=27% Similarity=0.307 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--E--ecCCCCCccHHHHHHHHhC--CCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~--v--i~~~~~~~~~~~~~~~~~~--~~~d 267 (380)
+++++||+|+ |.+|...++.+...|+ +|+.++++++..+...++.... . .|..+.. .+.+.+..... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQ-SVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4679999997 9999998888888899 8999988877665555543221 2 2322211 12222222211 3689
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999874
No 233
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.077 Score=48.50 Aligned_cols=79 Identities=27% Similarity=0.429 Sum_probs=51.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-Ee--cCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-vi--~~~~~~~~~~~~~~~~~--~~ 264 (380)
.++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.+ .+.+. ++ |..+.+ .+.+.+.... -+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLD-AVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 3578999997 9999998888888899 89999998877654432 33322 22 322221 1222222221 23
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|+++++.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 234
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.81 E-value=0.084 Score=46.52 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=69.1
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHh-
Q 016933 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 262 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~- 262 (380)
...+..+.++||=+|.| +|+.++.+|+.++ ..+|++++.+++..+.+++ .|...-+.....+ ..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence 34556677889988864 4777777887763 3499999999998887765 4543222222222 444444442
Q ss_pred ---CCCccEEEEccc---ChhhHHHHHHHhhcCCcEEEEEcC
Q 016933 263 ---NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 263 ---~~~~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
.+.||.||--.. -...+..+.+.++++ |.++.-..
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn~ 179 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDNT 179 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEcC
Confidence 237999875432 235678889999997 88776543
No 235
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.81 E-value=0.1 Score=46.16 Aligned_cols=80 Identities=20% Similarity=0.307 Sum_probs=51.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-EecCCCCC-ccHHHHHHHHhC--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi~~~~~~-~~~~~~~~~~~~--~~ 265 (380)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +..+... .+..+-.+ ..+.+.+..... ++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999997 9999999998888899 889998887765443 2234432 22222111 123333333222 36
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|++.|.
T Consensus 83 id~vi~~ag~ 92 (253)
T PRK08217 83 LNGLINNAGI 92 (253)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 236
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.16 Score=45.70 Aligned_cols=76 Identities=22% Similarity=0.342 Sum_probs=48.3
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce----EecCCCCCccHHHHHHHHh--CCCc
Q 016933 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQEVIAEMT--NGGV 266 (380)
Q Consensus 198 ~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~----vi~~~~~~~~~~~~~~~~~--~~~~ 266 (380)
+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +..+... ..|..+.+ ...+.+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhcCCC
Confidence 6899987 9999999988888899 788888887664433 2334322 23433322 1222222221 1368
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999974
No 237
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.77 E-value=0.18 Score=44.10 Aligned_cols=90 Identities=21% Similarity=0.238 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCc--EEEEEcCC----hhH--------HHHHHhcCCceEecCCCCCccHHHHHH
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS----SKR--------FEEAKKFGVTDFVNTSEHDRPIQEVIA 259 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~--~vi~~~~~----~~~--------~~~~~~lG~~~vi~~~~~~~~~~~~~~ 259 (380)
-.+.+++|+|+|..|.+.+..+...|+. +++.++++ .+| .+++++++... . +. .+.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~--~l~~~l- 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GG--TLKEAL- 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cC--CHHHHH-
Confidence 3567999999999999999888889997 89999988 343 33445543211 1 01 133333
Q ss_pred HHhCCCccEEEEcccChhhH-HHHHHHhhcCCcEEEEE
Q 016933 260 EMTNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLV 296 (380)
Q Consensus 260 ~~~~~~~d~v~d~~g~~~~~-~~~~~~l~~~~G~~v~~ 296 (380)
.++|+++.+++. ..+ ...++.+.++ ..+..+
T Consensus 96 ----~~~dvlIgaT~~-G~~~~~~l~~m~~~-~ivf~l 127 (226)
T cd05311 96 ----KGADVFIGVSRP-GVVKKEMIKKMAKD-PIVFAL 127 (226)
T ss_pred ----hcCCEEEeCCCC-CCCCHHHHHhhCCC-CEEEEe
Confidence 248999999974 443 4677777775 544433
No 238
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.078 Score=47.16 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=50.1
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-E--ecCCCCCccHHHHHHHHhCCCcc
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMTNGGVD 267 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-v--i~~~~~~~~~~~~~~~~~~~~~d 267 (380)
++++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+.+ .+... + .|..+. +.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-----IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-----HHHHHHhcCCCC
Confidence 467999997 9999999999988999 88888888766554433 33221 1 233221 223333344799
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
++|++.|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99999873
No 239
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.73 E-value=0.16 Score=45.08 Aligned_cols=79 Identities=24% Similarity=0.296 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-E--ecCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-v--i~~~~~~~~~~~~~~~~~--~~ 264 (380)
+++++||+|+ |.+|...+......|+ +|+.+++++++.+.+.+ .+... . .|..+. ..+.+.+..+. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDE-EAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence 3578999997 9999998888877899 89999888776544322 23321 2 233222 12333333322 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|++|.++|.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 69999998874
No 240
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.72 E-value=0.068 Score=47.28 Aligned_cols=79 Identities=24% Similarity=0.294 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cC--Cc-eEe--cCCCCCccHHHHHHHHh--CCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG--VT-DFV--NTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG--~~-~vi--~~~~~~~~~~~~~~~~~--~~~ 265 (380)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ +. .. .++ |..+.+ .+...+.... -+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEA-DVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence 3578999997 9999998888888899 79999999877655432 32 21 122 222211 2323222221 136
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 241
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.067 Score=47.68 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce-E--ecCCCCCccHHHHHHHHhC--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMTN--GG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~---lG~~~-v--i~~~~~~~~~~~~~~~~~~--~~ 265 (380)
+++++||+|+ |.+|...+......|+ +|+.+++++++.+..++ .+... . .|..+.+ .+.+.+.+... ++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDA-QCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcCC
Confidence 4678999997 9999998888877899 78888888776654443 34321 2 2332221 13333333221 37
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999984
No 242
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.71 E-value=0.089 Score=47.38 Aligned_cols=79 Identities=27% Similarity=0.360 Sum_probs=58.5
Q ss_pred CCCCeEEEEcC-CHHHHH-HHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCc---eEecCCCCCccHHHHHHHHhC
Q 016933 194 ERGSSVAVFGL-GAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT---DFVNTSEHDRPIQEVIAEMTN 263 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~-ai~la~~~g~~~vi~~~~~~~~~~~~~~-----lG~~---~vi~~~~~~~~~~~~~~~~~~ 263 (380)
+-|++.+|+|+ .++|.+ |-++|+ .|. +|+.+.|+++|++.+++ .++. .++|+.+++. ..+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 45789999998 789976 777777 899 89999999999877654 4431 2567777665 4555666555
Q ss_pred C-CccEEEEcccC
Q 016933 264 G-GVDRSVECTGN 275 (380)
Q Consensus 264 ~-~~d~v~d~~g~ 275 (380)
+ .+-+.++++|-
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 5 77888999884
No 243
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.081 Score=46.83 Aligned_cols=79 Identities=27% Similarity=0.291 Sum_probs=49.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eE--ecCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~-~v--i~~~~~~~~~~~~~~~~~--~~ 264 (380)
.++++||+|+ |.+|...+......|+ +|+.+++++++.+.+.+ .+.. .. .|..+.. .+.+.+.... .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPD-SAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence 4678999997 9999998888888899 89999888765433322 2221 12 2332221 1222222221 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999999884
No 244
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.68 E-value=0.088 Score=47.52 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=48.8
Q ss_pred CCCeEEEEcCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHH----HHHhcCCceEe--cCCCCC--ccHHHHHHHHhC
Q 016933 195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTDFV--NTSEHD--RPIQEVIAEMTN 263 (380)
Q Consensus 195 ~g~~vlI~G~g---~~G~~ai~la~~~g~~~vi~~~~~~~~~~----~~~~lG~~~vi--~~~~~~--~~~~~~~~~~~~ 263 (380)
+++++||+|++ ++|.+.++.....|+ +|+.++++++..+ +.+++|....+ |..+.+ ..+.+.+.+..
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~- 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW- 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh-
Confidence 46889999984 899998888888999 8888877653222 22334543322 333321 12223333222
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999999873
No 245
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.094 Score=47.06 Aligned_cols=79 Identities=19% Similarity=0.311 Sum_probs=51.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCce-E--ecCCCCCccHHHHHHHHh-CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-F--VNTSEHDRPIQEVIAEMT-NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-l----G~~~-v--i~~~~~~~~~~~~~~~~~-~~ 264 (380)
+++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+.+ + +.+. . .|..+.+ ...+.+.+.. -+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE-DLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHHHHhhC
Confidence 4788999997 8999999988888999 89988898877654432 2 3221 2 2333321 1222222221 24
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++++.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999999874
No 246
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.076 Score=47.23 Aligned_cols=79 Identities=23% Similarity=0.297 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-E--ecCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-v--i~~~~~~~~~~~~~~~~~--~~ 264 (380)
.++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ .+.+. . .|..+.+ .+.+.+.+.. -+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ-QVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4789999997 9999999988888999 89988888776654432 23221 1 2333321 1223232221 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 247
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.66 E-value=0.44 Score=43.42 Aligned_cols=56 Identities=18% Similarity=0.127 Sum_probs=46.9
Q ss_pred hccCCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcC---ChhHHHHHHhcCCceEe
Q 016933 189 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~---~~~~~~~~~~lG~~~vi 245 (380)
....+.||.+.||-.. |.+|...+.++...|+ ++|.+.. +.+|...++.+|+..+.
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 4567899999999875 9999999999999999 6666643 66899999999997664
No 248
>PLN02366 spermidine synthase
Probab=95.66 E-value=0.09 Score=48.27 Aligned_cols=99 Identities=21% Similarity=0.156 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--------eEecCCCCCccHHHHHHHHhCCC
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--------DFVNTSEHDRPIQEVIAEMTNGG 265 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~--------~vi~~~~~~~~~~~~~~~~~~~~ 265 (380)
.+.++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.+++.-.. .+ .....| ..+.+++..++.
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv-~vi~~D--a~~~l~~~~~~~ 165 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRV-NLHIGD--GVEFLKNAPEGT 165 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCce-EEEECh--HHHHHhhccCCC
Confidence 4568899998865 55677888877766899999999888888773211 11 000111 333344433447
Q ss_pred ccEEEEcccC----------hhhHHHHHHHhhcCCcEEEEEc
Q 016933 266 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 266 ~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g 297 (380)
+|+||--... .+.+..+.++|+++ |.++...
T Consensus 166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 9998653222 24578899999997 9987543
No 249
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.66 E-value=0.17 Score=47.05 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCCHHHHHHHHHH-HHcCCcEEEEEcCChhHHHHHHh-----cCCceEecCCCCCccHHHHHHHHhCCCcc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVDRSSKRFEEAKK-----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 267 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la-~~~g~~~vi~~~~~~~~~~~~~~-----lG~~~vi~~~~~~~~~~~~~~~~~~~~~d 267 (380)
+..++++|+|+|..|.+.+..+ ...++++|.++++++++.+.+.+ ++.. +..+++ +.+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~----~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS----ADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC----HHHHH-----hcCC
Confidence 3457899999999998776544 45688899999999888654432 3432 222222 33333 2589
Q ss_pred EEEEcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 268 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 268 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
+|+.|+++...+- . +.++++ -+++.+|...
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC-cEEEecCCCC
Confidence 9999998854333 3 888996 8888898754
No 250
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.098 Score=46.81 Aligned_cols=79 Identities=25% Similarity=0.409 Sum_probs=50.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c--CCc-eEe--cCCCCCccHHHHHHHHh-CCCc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFV--NTSEHDRPIQEVIAEMT-NGGV 266 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-l--G~~-~vi--~~~~~~~~~~~~~~~~~-~~~~ 266 (380)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ + +.. ..+ |..+.+ .+.+...... .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEA-GREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHhcCCC
Confidence 4678999987 9999998888888899 89999998877655533 2 211 122 222211 1222222111 2478
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999999875
No 251
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.21 Score=45.08 Aligned_cols=79 Identities=18% Similarity=0.188 Sum_probs=50.1
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCc-eEecCCCCC-ccHHHHHHHHh--CCCccEE
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT-DFVNTSEHD-RPIQEVIAEMT--NGGVDRS 269 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l-G~~-~vi~~~~~~-~~~~~~~~~~~--~~~~d~v 269 (380)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+. +.. ..+..+-.+ ..+.+.+.... -+++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999997 9999998888877898 899998988776655442 221 122222111 11222232221 1378999
Q ss_pred EEcccC
Q 016933 270 VECTGN 275 (380)
Q Consensus 270 ~d~~g~ 275 (380)
+.+.|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999885
No 252
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.64 E-value=0.51 Score=42.77 Aligned_cols=61 Identities=20% Similarity=0.173 Sum_probs=46.6
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEc--CChhHHHHHHhcCCceEecCC
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTS 248 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~--~~~~~~~~~~~lG~~~vi~~~ 248 (380)
.....+++|++|+=--+|.+|.+.+.+|+.+|++-++++. .+.+|..+++.+|+..++...
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3556799999554333599999999999999995555553 477999999999997766544
No 253
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.64 E-value=0.09 Score=48.45 Aligned_cols=92 Identities=26% Similarity=0.416 Sum_probs=60.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccC
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~-~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 275 (380)
.+|+|+|.|.+|.+.+..++..|. ..|+++++++++.+.+++.|....+. .+ ..+.+ ...|+|+.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-~~----~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-TS----AAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-CC----HHHHh-----cCCCEEEECCCH
Confidence 579999999999998888887774 37999999999999888887532111 11 11111 257999999876
Q ss_pred hhh---HHHHHHHhhcCCcEEEEEcCC
Q 016933 276 IDN---MISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 276 ~~~---~~~~~~~l~~~~G~~v~~g~~ 299 (380)
... +......++++ ..++.+|..
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs~ 102 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGSV 102 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCccc
Confidence 322 23333445564 556666543
No 254
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.63 E-value=0.053 Score=55.54 Aligned_cols=76 Identities=24% Similarity=0.289 Sum_probs=53.3
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChh---------------------HHHHHHhcCCceEecCCCC-C
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-D 251 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~---------------------~~~~~~~lG~~~vi~~~~~-~ 251 (380)
..+++|+|+|+|..|+.++..+...|+ +|+++++.+. +.++++++|.+...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 368899999999999999999999999 7888876532 4566777887654433211 1
Q ss_pred ccHHHHHHHHhCCCccEEEEcccC
Q 016933 252 RPIQEVIAEMTNGGVDRSVECTGN 275 (380)
Q Consensus 252 ~~~~~~~~~~~~~~~d~v~d~~g~ 275 (380)
-.+ ..+. ..+|.||.++|.
T Consensus 404 i~~----~~~~-~~~DavilAtGa 422 (654)
T PRK12769 404 ISL----ESLL-EDYDAVFVGVGT 422 (654)
T ss_pred CCH----HHHH-hcCCEEEEeCCC
Confidence 011 1111 269999999886
No 255
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.61 E-value=0.24 Score=44.39 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=60.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh-------------------hHH----HHHHhcCCce-EecCCCC
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTD-FVNTSEH 250 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~-------------------~~~----~~~~~lG~~~-vi~~~~~ 250 (380)
.+.+|+|+|.|++|..++..+-..|.++++.++.+. .|. +.++++..+- +..+++.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 347899999999999999999999988888887542 111 2222333321 2111111
Q ss_pred CccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
- ..+.+.++....+|+|+||++.......+.+......-.++..|..
T Consensus 109 i--~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 I--TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred c--ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 0 0123334443479999999988554444444444432445655544
No 256
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.086 Score=46.21 Aligned_cols=79 Identities=14% Similarity=0.136 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E--ecCCCCC--ccHHHHHHHHhCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v--i~~~~~~--~~~~~~~~~~~~~ 264 (380)
++++++|+|+ +++|.+.+......|+ +|+.+++++++.+.+ ++.+.+. . .|..+.+ ..+.+.+.+..++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4688999997 8999998877777899 888888888776443 2335432 1 2322221 1122333332232
Q ss_pred CccEEEEccc
Q 016933 265 GVDRSVECTG 274 (380)
Q Consensus 265 ~~d~v~d~~g 274 (380)
.+|+++.+.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6999999986
No 257
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.59 E-value=0.1 Score=46.16 Aligned_cols=79 Identities=25% Similarity=0.359 Sum_probs=49.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCce-E--ecCCCCCccHHHHHHHHhC--CCc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGV 266 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~--~~~~~~~lG~~~-v--i~~~~~~~~~~~~~~~~~~--~~~ 266 (380)
.++++||+|+ |.+|...+..+...|+ +|+.+++++. ..+.+++++... + .|..+.+ .+.+.+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIE-AIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHcCCC
Confidence 4789999997 9999998888888899 8888877652 233444455322 2 2332221 23333332221 369
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 258
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.093 Score=46.62 Aligned_cols=79 Identities=22% Similarity=0.320 Sum_probs=50.1
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eEecCCCCC-ccHHHHHHHHhC--CCc
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGV 266 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~-~vi~~~~~~-~~~~~~~~~~~~--~~~ 266 (380)
|+++||+|+ |.+|...++.....|+ +|++++++.++.+.+.+ .+.. ..+..+-.+ ..+.+.+.+... +++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999987 9999999998888999 89999888776554432 2322 223222222 123232322221 368
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|+++++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999999873
No 259
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.063 Score=47.27 Aligned_cols=80 Identities=28% Similarity=0.373 Sum_probs=51.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCC-c---eEecCCCCC----ccHHHHHHHH
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-T---DFVNTSEHD----RPIQEVIAEM 261 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~-~---~vi~~~~~~----~~~~~~~~~~ 261 (380)
++++++|+|+ |.+|...++.....|+ +|+.+++++++.+.+.+ .+. + ...|..+.+ ..+.+.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4578999997 9999998888888899 89999998876654422 221 1 112332211 1233334443
Q ss_pred hCCCccEEEEcccC
Q 016933 262 TNGGVDRSVECTGN 275 (380)
Q Consensus 262 ~~~~~d~v~d~~g~ 275 (380)
..+.+|+++.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33578999999884
No 260
>PRK07574 formate dehydrogenase; Provisional
Probab=95.54 E-value=0.12 Score=49.05 Aligned_cols=46 Identities=24% Similarity=0.385 Sum_probs=37.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~ 241 (380)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++....+..+++|.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~ 236 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGL 236 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCc
Confidence 57899999999999999999999999 99999887644444444554
No 261
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.54 E-value=0.19 Score=43.60 Aligned_cols=103 Identities=18% Similarity=0.256 Sum_probs=62.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh--------hHHHHHHhcCCce---------EecCCCC-----Ccc
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS--------KRFEEAKKFGVTD---------FVNTSEH-----DRP 253 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~--------~~~~~~~~lG~~~---------vi~~~~~-----~~~ 253 (380)
...|+|+|.|++|..++..+-..|.+++..++-+. +-..+....|-.. -+|+.-. +.-
T Consensus 30 ~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~ 109 (263)
T COG1179 30 QAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFI 109 (263)
T ss_pred hCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhh
Confidence 36799999999999999999999998888775422 2222222222111 0111110 101
Q ss_pred HHHHHHHHhCCCccEEEEcccChhhHHHHHH-HhhcCCcEEEEEcCC
Q 016933 254 IQEVIAEMTNGGVDRSVECTGNIDNMISAFE-CVHDGWGVAVLVGVP 299 (380)
Q Consensus 254 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~-~l~~~~G~~v~~g~~ 299 (380)
..+.+.++...++|+|+||+.+-..-..++. |.+.. -.++..+..
T Consensus 110 t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Ga 155 (263)
T COG1179 110 TEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGA 155 (263)
T ss_pred CHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccc
Confidence 2345666777799999999987555444444 55554 566666544
No 262
>PRK00811 spermidine synthase; Provisional
Probab=95.54 E-value=0.1 Score=47.50 Aligned_cols=98 Identities=17% Similarity=0.151 Sum_probs=63.4
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--------ceEecCCCCCccHHHHHHHHhCCC
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG 265 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~--------~~vi~~~~~~~~~~~~~~~~~~~~ 265 (380)
...++||++|+|. |.++..+++..+..+|++++.+++-.+.+++.-. +.-+.....| ..+.++. ..+.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~D--a~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGD--GIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECc--hHHHHhh-CCCc
Confidence 3467899998865 6667777787677799999999998888887311 1000111112 3333433 3447
Q ss_pred ccEEEEcccC----------hhhHHHHHHHhhcCCcEEEEE
Q 016933 266 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 266 ~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~ 296 (380)
+|+|+--... .+.+..+.+.|+++ |.++..
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 9998753211 23467888999997 998865
No 263
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.53 E-value=0.099 Score=45.95 Aligned_cols=78 Identities=22% Similarity=0.303 Sum_probs=50.7
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceE---ecCCCCCccHHHHHHHHhC--CC
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMTN--GG 265 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~v---i~~~~~~~~~~~~~~~~~~--~~ 265 (380)
++++||+|+ |.+|...+......|+ +|+++++++++.+.+ ++.+.... .|..+.. .+.+.+.+... +.
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEA-AVRALIEAAVEAFGA 82 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHhCC
Confidence 468999998 9999999888888899 799998988764433 33444322 2333221 23333333221 36
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++.+.|.
T Consensus 83 id~vi~~ag~ 92 (246)
T PRK05653 83 LDILVNNAGI 92 (246)
T ss_pred CCEEEECCCc
Confidence 8999999865
No 264
>PRK06196 oxidoreductase; Provisional
Probab=95.53 E-value=0.12 Score=47.86 Aligned_cols=79 Identities=19% Similarity=0.282 Sum_probs=50.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcC-Cce-EecCCCCCccHHHHHHHHhC--CCccE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDR 268 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~-~lG-~~~-vi~~~~~~~~~~~~~~~~~~--~~~d~ 268 (380)
.++++||+|+ |.+|...+......|+ +|+.++++.++.+.+. ++. ... ..|..+.+ .+.+.+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~-~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLE-SVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHH-HHHHHHHHHHhcCCCCCE
Confidence 4679999997 9999998888888899 8888888887665432 232 211 12333221 13333333322 47999
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
++++.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9999873
No 265
>PRK06128 oxidoreductase; Provisional
Probab=95.47 E-value=0.21 Score=45.76 Aligned_cols=79 Identities=18% Similarity=0.187 Sum_probs=47.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh------HHHHHHhcCCce-E--ecCCCCCccHHHHHHHHh--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK------RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~------~~~~~~~lG~~~-v--i~~~~~~~~~~~~~~~~~-- 262 (380)
.++++||+|+ |.+|.+.+......|+ +|+.+.++.+ ..+.+++.|... + .|..+.+ .+.+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEA-FCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHHHHHH
Confidence 4689999997 9999998888888899 7776654432 122334445432 2 2332221 1222222221
Q ss_pred CCCccEEEEcccC
Q 016933 263 NGGVDRSVECTGN 275 (380)
Q Consensus 263 ~~~~d~v~d~~g~ 275 (380)
-+++|++|++.|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 1379999999874
No 266
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.11 Score=45.84 Aligned_cols=79 Identities=22% Similarity=0.360 Sum_probs=51.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-E--ecCCCCC--ccHHHHHHHHhCCCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNGGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~~~-v--i~~~~~~--~~~~~~~~~~~~~~~d 267 (380)
+++++||+|+ |.+|...++.....|+ +|+.+++++++.+.+ ++++... . .|..+.. ..+.+.+.+.. +++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF-GRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence 4678999997 9999999998888999 899998887665443 4455432 1 2222211 11222222222 3689
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
++|++.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999874
No 267
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.46 E-value=0.13 Score=45.96 Aligned_cols=79 Identities=20% Similarity=0.215 Sum_probs=47.9
Q ss_pred CCCeEEEEcCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHH----HHHhcCCceEe--cCCCCC--ccHHHHHHHHhC
Q 016933 195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTDFV--NTSEHD--RPIQEVIAEMTN 263 (380)
Q Consensus 195 ~g~~vlI~G~g---~~G~~ai~la~~~g~~~vi~~~~~~~~~~----~~~~lG~~~vi--~~~~~~--~~~~~~~~~~~~ 263 (380)
.|+++||+|++ ++|.+.+......|+ +|+.++++++..+ +.++++...++ |..+.+ ..+.+.+.+..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW- 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-
Confidence 46899999963 899998888888899 7888877754322 22334432233 222221 12223333322
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+.+|+++++.|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 479999998873
No 268
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.15 Score=44.96 Aligned_cols=80 Identities=25% Similarity=0.246 Sum_probs=51.3
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-Ee--cCCCCCccHHHHHHHHhC--
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN-- 263 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-vi--~~~~~~~~~~~~~~~~~~-- 263 (380)
..++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+... ++ |..+.+ .+.+.++....
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPE-AIAPGIAELLEQF 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHH-HHHHHHHHHHHHc
Confidence 34578999987 9999999988888899 89999998876544432 23221 22 322221 23233333221
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+.+|+++.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 369999999884
No 269
>PRK06484 short chain dehydrogenase; Validated
Probab=95.45 E-value=0.28 Score=48.73 Aligned_cols=103 Identities=23% Similarity=0.333 Sum_probs=66.8
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce---EecCCCCCccHHHHHHHHhC--CCc
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGV 266 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~---vi~~~~~~~~~~~~~~~~~~--~~~ 266 (380)
..++++||+|+ +++|...++.....|+ +|+.+++++++.+.+.+ ++... ..|..+.+ ...+.+.+... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence 45789999997 9999998888888999 89999998887766554 45432 12333322 12222332221 369
Q ss_pred cEEEEcccCh--------------------------hhHHHHHHHhhcCCcEEEEEcCC
Q 016933 267 DRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 267 d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
|++|++.|.. .....++..+..+ |+++.++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 9999988742 0133344556565 899888764
No 270
>PLN02476 O-methyltransferase
Probab=95.44 E-value=0.16 Score=45.75 Aligned_cols=106 Identities=21% Similarity=0.219 Sum_probs=70.0
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHh-
Q 016933 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 262 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~- 262 (380)
...+..+.++||=+|.+ +|+.++.+|+.++ -.+|++++.++++.+.+++ .|...-+.....+ ..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence 34556677899988863 5777888888774 2279999999998877754 5664323222222 444444432
Q ss_pred ---CCCccEEEEcccC---hhhHHHHHHHhhcCCcEEEEEcC
Q 016933 263 ---NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 263 ---~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
.+.||.||--... ...++.+++.++++ |.++.-..
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNv 229 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNV 229 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecC
Confidence 2479998654433 34678899999997 88876544
No 271
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.42 E-value=0.14 Score=44.92 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=49.9
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCceE-ecCCCCCccHHHHHHHHhC--CCccEEE
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV 270 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~-~~~~~~lG~~~v-i~~~~~~~~~~~~~~~~~~--~~~d~v~ 270 (380)
++++||+|+ +.+|...+......|+ +|+.+++++++ .+.+++.|+..+ .|..+.+ ...+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTNA-GIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCHH-HHHHHHHHHHhhCCCccEEE
Confidence 467999997 9999999988888899 88888877643 344455564322 2333221 13333333222 3699999
Q ss_pred EcccC
Q 016933 271 ECTGN 275 (380)
Q Consensus 271 d~~g~ 275 (380)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 99874
No 272
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.14 Score=44.65 Aligned_cols=74 Identities=23% Similarity=0.294 Sum_probs=48.5
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceE-ecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 198 ~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~~~v-i~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
+++|+|+ |.+|...++.....|+ +|+.+++++++.+.+ ++++...+ .|..+.+ .+.+.++.. .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~-~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDPA-SLEEARGLF-PHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCHH-HHHHHHHHH-hhcCcEEEECCC
Confidence 4899987 9999998888888899 888888888876654 34454332 2333221 133333332 236899998865
No 273
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.40 E-value=0.12 Score=45.90 Aligned_cols=79 Identities=22% Similarity=0.281 Sum_probs=48.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHHHhcCCceE-ecCCCCCccHHHHHHHHh--CCCccEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS 269 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~-~~~~~~~~~~lG~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~v 269 (380)
.++++||+|+ |.+|...++.....|+ +|+.+.+ +++..+.+++.+...+ .|..+.+ ...+.+.... -+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNRD-QVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 3688999997 9999998888888899 6766544 4444444544443222 2333321 2333333322 1369999
Q ss_pred EEcccC
Q 016933 270 VECTGN 275 (380)
Q Consensus 270 ~d~~g~ 275 (380)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 999874
No 274
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.12 Score=46.66 Aligned_cols=77 Identities=17% Similarity=0.257 Sum_probs=50.5
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCce-E--ecCCCCCccHHHHHHHHh--CCCccEE
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDRS 269 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l-G~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d~v 269 (380)
+++||+|+ |.+|...+..+...|+ +|+++.++.++.+.+++. +... + .|..+.+ .+.+.+.+.. .+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA-AVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 57999987 9999998888878899 899998988877666542 3211 1 2332221 2333333322 1368999
Q ss_pred EEcccC
Q 016933 270 VECTGN 275 (380)
Q Consensus 270 ~d~~g~ 275 (380)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999874
No 275
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.11 Score=46.39 Aligned_cols=80 Identities=24% Similarity=0.302 Sum_probs=51.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH----HHHhcCCce---EecCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~----~~~~lG~~~---vi~~~~~~~~~~~~~~~~~--~~ 264 (380)
.+++++|+|+ |.+|...++.+...|++.|+.++++.++.. .+++.+... ..|..+.+ .+.+.+.... -+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4688999997 999999998888899944999988776554 333445432 12333321 1222222221 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 276
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.11 Score=46.62 Aligned_cols=79 Identities=27% Similarity=0.322 Sum_probs=51.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----c--CCce-E--ecCCCCCccHHHHHHHHh--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTD-F--VNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----l--G~~~-v--i~~~~~~~~~~~~~~~~~-- 262 (380)
.++++||+|+ +.+|.+.++.....|+ +|+.+++++++.+.+.+ . +... . .|..+.+ .+.+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence 4689999997 9999998888888899 89999898876654322 1 1111 1 2333322 1222233222
Q ss_pred CCCccEEEEcccC
Q 016933 263 NGGVDRSVECTGN 275 (380)
Q Consensus 263 ~~~~d~v~d~~g~ 275 (380)
-+.+|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 1369999999884
No 277
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.36 E-value=0.32 Score=40.20 Aligned_cols=90 Identities=21% Similarity=0.257 Sum_probs=57.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccCh
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 276 (380)
.+|.++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+..+- + ..+.+++ .|+||-++...
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~~---s----~~e~~~~-----~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVAD---S----PAEAAEQ-----ADVVILCVPDD 68 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEES---S----HHHHHHH-----BSEEEE-SSSH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhhh---h----hhhHhhc-----ccceEeecccc
Confidence 368899999999988888888899 899999999999999888854321 1 2233322 58888888875
Q ss_pred hhHHHHHH------HhhcCCcEEEEEcCCC
Q 016933 277 DNMISAFE------CVHDGWGVAVLVGVPS 300 (380)
Q Consensus 277 ~~~~~~~~------~l~~~~G~~v~~g~~~ 300 (380)
+.....+. .+.++ ..++.++...
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT~~ 97 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMSTIS 97 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence 55554433 34453 4555555443
No 278
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.36 E-value=0.32 Score=41.48 Aligned_cols=105 Identities=20% Similarity=0.338 Sum_probs=62.1
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHhC
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 263 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~~ 263 (380)
.....++++++||=+|+| .|..++.+++.....+|++++.+++..+.+++ ++.+.+- ....+ ..+.+..+.
T Consensus 33 ~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~-~~~~d--~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVE-VIEGS--APECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeE-EEECc--hHHHHhhCC-
Confidence 344567788888777764 25556666665533399999999988877764 5543321 11111 222222221
Q ss_pred CCccE-EEEcccC-hhhHHHHHHHhhcCCcEEEEEcC
Q 016933 264 GGVDR-SVECTGN-IDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 264 ~~~d~-v~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
..+|. .++.... ...+..+.+.|+++ |+++....
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 22344 4443222 35688899999997 99887754
No 279
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.36 E-value=0.21 Score=42.56 Aligned_cols=76 Identities=29% Similarity=0.276 Sum_probs=49.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCceE-ecCCCCCccHHHHHHHHhCCCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF-VNTSEHDRPIQEVIAEMTNGGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-l----G~~~v-i~~~~~~~~~~~~~~~~~~~~~d 267 (380)
++.+++|+|+ |.+|...+..+...|+ +|+.+.++.++.+.+.+ + +.... .+..+ . +.+.+.. .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~----~-~~~~~~~-~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD----D-AARAAAI-KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC----H-HHHHHHH-hcCC
Confidence 5689999997 9999988888877888 88888898877655433 2 22211 11211 1 1122222 2589
Q ss_pred EEEEcccChh
Q 016933 268 RSVECTGNID 277 (380)
Q Consensus 268 ~v~d~~g~~~ 277 (380)
+||.+++...
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999987643
No 280
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.12 Score=45.85 Aligned_cols=79 Identities=19% Similarity=0.290 Sum_probs=50.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-Ee--cCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~----~lG~~~-vi--~~~~~~~~~~~~~~~~~~--~ 264 (380)
+++++||+|+ |++|...+......|+ +|+.+++++++.+.+. +.+.+. .+ |..+.+ ...+.+.+... +
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEA-YAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence 3678999997 9999998888888899 8998888887765442 234322 22 332221 12222222221 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|+++.+.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 281
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.32 E-value=0.12 Score=47.77 Aligned_cols=95 Identities=16% Similarity=0.203 Sum_probs=61.2
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEe-cCCCCCccHHHHHHHHhCCCccEEEEcccC
Q 016933 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (380)
Q Consensus 198 ~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi-~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 275 (380)
+|||+|+ |-+|...+..+...|. +|++++++.++...+...+++.+. |..+. +.+.+... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~-----~~l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSLP-----ETLPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCCH-----HHHHHHHC-CCCEEEECCCC
Confidence 6999997 9999999988888898 899998887776665556664432 22221 12333323 58999998763
Q ss_pred hh------------hHHHHHHHhhcC-CcEEEEEcCC
Q 016933 276 ID------------NMISAFECVHDG-WGVAVLVGVP 299 (380)
Q Consensus 276 ~~------------~~~~~~~~l~~~-~G~~v~~g~~ 299 (380)
.. ....+++.++.. -.+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 21 113445555543 1378777653
No 282
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.30 E-value=0.13 Score=45.89 Aligned_cols=79 Identities=24% Similarity=0.291 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceE-e--cCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-V--NTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~v-i--~~~~~~~~~~~~~~~~~--~~ 264 (380)
+++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+.+.. + |..+.+ .+.+.+.... -+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNED-AVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence 4689999998 9999998888888999 888888888654333 33454321 2 222221 1222222221 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999999874
No 283
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.14 Score=45.57 Aligned_cols=78 Identities=17% Similarity=0.179 Sum_probs=50.0
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCC--c-eE--ecCCCCCccHHHHHHHHhC--CCc
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--T-DF--VNTSEHDRPIQEVIAEMTN--GGV 266 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~--~-~v--i~~~~~~~~~~~~~~~~~~--~~~ 266 (380)
+.++||+|+ |.+|...+......|+ +|+.++++.++.+.+.+ +.. + .. .|..+. ..+.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDA-DALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH-HHHHHHHHHHHHhCCCC
Confidence 468999987 9999998888888899 89999888877654433 321 1 11 233222 123333333222 368
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998873
No 284
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.27 E-value=0.14 Score=45.60 Aligned_cols=79 Identities=29% Similarity=0.438 Sum_probs=50.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-Ee--cCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi--~~~~~~~~~~~~~~~~~--~~ 264 (380)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.|... .+ |..+.+ .+.+.+.... -+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD-AVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence 4689999997 9999999888888899 899898887665432 2233322 22 332221 2323333222 23
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|++|++.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 78999999875
No 285
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.13 Score=45.66 Aligned_cols=79 Identities=25% Similarity=0.347 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c---CCce---EecCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GVTD---FVNTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-l---G~~~---vi~~~~~~~~~~~~~~~~~~--~ 264 (380)
+++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+.+ + +... ..|..+.+ .+...+..... +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDED-QCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHH-HHHHHHHHHHHHcC
Confidence 4688999997 9999998888888999 89999888876544432 2 3221 22332221 12222322211 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999999874
No 286
>PRK05717 oxidoreductase; Validated
Probab=95.25 E-value=0.17 Score=45.00 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH-HHhcCCce-E--ecCCCCCccHHHHHHHHhC--CCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~-~~~lG~~~-v--i~~~~~~~~~~~~~~~~~~--~~~d 267 (380)
.|+++||+|+ |.+|...+......|+ +|+.+++++++.+. .++++... . .|..+.+ .+.+.+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEA-QVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4688999987 9999998888888898 88888877765443 34454321 1 2332221 12222333222 3689
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99999874
No 287
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.24 E-value=0.19 Score=47.87 Aligned_cols=90 Identities=28% Similarity=0.387 Sum_probs=56.2
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHh--cC--Cce-EecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 199 VAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK--FG--VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 199 vlI~G~g~~G~~ai~la~~~g~~-~vi~~~~~~~~~~~~~~--lG--~~~-vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
|+|+|+|.+|..++..+...+-. +|++.+++.++.+.+.+ .+ +.. .+|..+ . +.+.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~-~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----P-ESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----H-HHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----H-HHHHHHHh-cCCEEEEC
Confidence 68999999999999988877643 89999999999777654 22 222 233333 2 22555444 46999999
Q ss_pred ccChhhHHHHHHHhhcCCcEEEE
Q 016933 273 TGNIDNMISAFECVHDGWGVAVL 295 (380)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~~v~ 295 (380)
+|.......+-.|+..+ -+++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 98754444555566664 55555
No 288
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.14 Score=45.54 Aligned_cols=79 Identities=23% Similarity=0.314 Sum_probs=49.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E--ecCCCCC--ccHHHHHHHHhCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v--i~~~~~~--~~~~~~~~~~~~~ 264 (380)
+++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+.+ ..+.+.+.+.. +
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-G 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 4689999997 9999998888878899 899998887664333 3344322 2 2222221 11222222222 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 289
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.19 Score=44.78 Aligned_cols=81 Identities=20% Similarity=0.267 Sum_probs=49.1
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHc-CCcEEEEEcCChhH-HH-H---HHhcCCc--eEe--cCCCCCccHHHHHHHH
Q 016933 193 PERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKR-FE-E---AKKFGVT--DFV--NTSEHDRPIQEVIAEM 261 (380)
Q Consensus 193 ~~~g~~vlI~G~-g~~G~~ai~la~~~-g~~~vi~~~~~~~~-~~-~---~~~lG~~--~vi--~~~~~~~~~~~~~~~~ 261 (380)
+..++++||+|+ |++|...++-+... |+ +|+.+++++++ .+ . +++.+.. +++ |..+.+ ...+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD-SHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH-HHHHHHHHH
Confidence 456788999997 99999988766555 57 88888887764 33 2 3333431 222 332221 133333333
Q ss_pred hC-CCccEEEEcccC
Q 016933 262 TN-GGVDRSVECTGN 275 (380)
Q Consensus 262 ~~-~~~d~v~d~~g~ 275 (380)
.. +++|+++.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479999887765
No 290
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.23 E-value=0.26 Score=42.77 Aligned_cols=102 Identities=22% Similarity=0.182 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceEec-------CCCCC-ccHHHHHHHHh--
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHD-RPIQEVIAEMT-- 262 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~~~vi~-------~~~~~-~~~~~~~~~~~-- 262 (380)
.++.+||+.|+|. |.-++.+|. .|. .|++++.++.-.+.+ ++.|...... +...+ .-....+.++.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 5678999999873 788888885 699 999999999988875 3333221000 00000 00000011111
Q ss_pred -CCCccEEEEcccC--------hhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 263 -NGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 263 -~~~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
.+.+|.|+|+..- ...+..+.++|+|+ |++.++...
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~ 154 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD 154 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence 1368999997531 24578999999997 987766543
No 291
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.23 E-value=0.15 Score=45.51 Aligned_cols=79 Identities=29% Similarity=0.449 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-E--ecCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-v--i~~~~~~~~~~~~~~~~~~--~ 264 (380)
+++++||+|+ |.+|...++.....|+ +|+.++++.++.+.+.+ .+... . .|..+.+ .+.+.+.++.. +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~-~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEA-DIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4689999997 9999998888888899 89999888877654432 23221 2 2333321 23222222221 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 292
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.13 Score=45.60 Aligned_cols=79 Identities=22% Similarity=0.287 Sum_probs=49.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c--CCc-eEe--cCCCCCccHHHHHHHHhC--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFV--NTSEHDRPIQEVIAEMTN--GG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-l--G~~-~vi--~~~~~~~~~~~~~~~~~~--~~ 265 (380)
+++++||+|+ |.+|...+......|+ +|+.+.++.++.+...+ + +.. .++ |..+.+ ...+.+..... ++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAE-AVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence 3678999997 9999988887777898 89999888765544332 2 322 122 322221 12222322221 37
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 293
>PRK04457 spermidine synthase; Provisional
Probab=95.22 E-value=0.27 Score=44.16 Aligned_cols=98 Identities=17% Similarity=0.135 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCc---eEecCCCCCccHHHHHHHHhCCCccEE
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT---DFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l-G~~---~vi~~~~~~~~~~~~~~~~~~~~~d~v 269 (380)
.++++||++|.|. |.++..+++.....++++++.+++-.+.+++. +.. .-+.....| ..+.+... .+.+|+|
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~D--a~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEAD--GAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECC--HHHHHHhC-CCCCCEE
Confidence 4567899999864 77888888877544999999999999998873 321 101111122 33444432 3479998
Q ss_pred E-EcccC---------hhhHHHHHHHhhcCCcEEEEE
Q 016933 270 V-ECTGN---------IDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 270 ~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 296 (380)
+ |.... .+.+..+.++|+++ |.++..
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 5 44221 36788999999997 998763
No 294
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.21 E-value=0.93 Score=39.43 Aligned_cols=117 Identities=11% Similarity=0.027 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~-~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
++..|||+|+|.++.-=+..+...|+ +|++++..- +.+..+.+.|.-..+. .+.... .+ .++++||-++
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~------dl--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKE------FI--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChH------Hh--CCCcEEEECC
Confidence 56789999999999887888888999 777774432 2222222233222221 121100 11 3689999999
Q ss_pred cChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEeee
Q 016933 274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF 322 (380)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 322 (380)
+.+..-.......+.. +.++.+........+.++..--...++|--+.
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence 8854444555555553 66666554433444444433222345554443
No 295
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.20 E-value=0.17 Score=47.16 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=30.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~ 230 (380)
+.+|+|+|+|++|..++..+-..|+++++.++.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 36799999999999999999999998898888763
No 296
>PRK06194 hypothetical protein; Provisional
Probab=95.20 E-value=0.14 Score=46.52 Aligned_cols=79 Identities=20% Similarity=0.243 Sum_probs=49.2
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hh---cCCce-EecCCCCC-ccHHHHHHHHh--CCCc
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KK---FGVTD-FVNTSEHD-RPIQEVIAEMT--NGGV 266 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~---lG~~~-vi~~~~~~-~~~~~~~~~~~--~~~~ 266 (380)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ .+ .+... ++..+-.+ ..+.+.+.... -+++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999987 9999998888888899 898888876654433 22 23322 12222222 12222222221 1368
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|++|++.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999885
No 297
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.23 Score=44.25 Aligned_cols=77 Identities=27% Similarity=0.380 Sum_probs=50.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCc-eEe--cCCCCCccHHHHHHHHhCCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT-DFV--NTSEHDRPIQEVIAEMTNGG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-l----G~~-~vi--~~~~~~~~~~~~~~~~~~~~ 265 (380)
.++++||+|+ +++|...++.....|+ +|+.++++.++.+.+.+ + +.. .++ |..+. ..+.+.+.. . +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~-~-g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP-EAREQLAAE-A-GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH-HHHHHHHHH-h-CC
Confidence 3689999997 8999998888888899 89999888776654322 2 322 122 22221 112222222 2 47
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 298
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.14 Score=45.68 Aligned_cols=78 Identities=26% Similarity=0.372 Sum_probs=49.4
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-Ee--cCCCCCccHHHHHHHHhC--CC
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GG 265 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi--~~~~~~~~~~~~~~~~~~--~~ 265 (380)
+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +..+... ++ |..+. ..+.+.+..... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDA-EACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence 357999997 9999999988888899 899998887654433 2234322 22 22221 123333333221 36
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 299
>PLN03139 formate dehydrogenase; Provisional
Probab=95.19 E-value=0.18 Score=47.84 Aligned_cols=89 Identities=17% Similarity=0.166 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++....+..++.|+..+ .+ +.+.+. ..|+|+-+..
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~---~~----l~ell~-----~sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE---ED----LDAMLP-----KCDVVVINTP 264 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec---CC----HHHHHh-----hCCEEEEeCC
Confidence 57899999999999999999999999 89999887544455555554321 11 222221 2566666554
Q ss_pred Chhh----H-HHHHHHhhcCCcEEEEEc
Q 016933 275 NIDN----M-ISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 275 ~~~~----~-~~~~~~l~~~~G~~v~~g 297 (380)
..+. + ...+..++++ ..++.++
T Consensus 265 lt~~T~~li~~~~l~~mk~g-a~lIN~a 291 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKG-VLIVNNA 291 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCC-eEEEECC
Confidence 3211 1 2455666664 5555554
No 300
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.17 E-value=0.13 Score=46.30 Aligned_cols=81 Identities=28% Similarity=0.308 Sum_probs=53.7
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc------eEecCCCCC--ccHHHHHHH
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT------DFVNTSEHD--RPIQEVIAE 260 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~------~vi~~~~~~--~~~~~~~~~ 260 (380)
-.|+++||+|+ .++|.+.+......|+ +|+..++++++.+..++ .+.. .+.|..+.+ ..+.+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 35788999987 8999998888888999 89999899887655443 2221 123333221 122233333
Q ss_pred HhCCCccEEEEcccC
Q 016933 261 MTNGGVDRSVECTGN 275 (380)
Q Consensus 261 ~~~~~~d~v~d~~g~ 275 (380)
...++.|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334579999998875
No 301
>PLN03075 nicotianamine synthase; Provisional
Probab=95.17 E-value=0.17 Score=45.87 Aligned_cols=98 Identities=13% Similarity=0.104 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhcC-----CceEecCCCCCccHHHHHHHHhCCCccE
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g-~~~vi~~~~~~~~~~~~~~lG-----~~~vi~~~~~~~~~~~~~~~~~~~~~d~ 268 (380)
+.++|+-+|.|..++.++.+++... ..+++.++.+++..+.+++.- ...-+.+...+ ..+... ..++||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~~~~--~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMDVTE--SLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhhccc--ccCCcCE
Confidence 6789999999999999888887553 238999999999988887733 11212222222 211100 1247999
Q ss_pred EEEcc-------cChhhHHHHHHHhhcCCcEEEEEc
Q 016933 269 SVECT-------GNIDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 269 v~d~~-------g~~~~~~~~~~~l~~~~G~~v~~g 297 (380)
||-.+ .....+..+.+.|+++ |.+++=.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 98775 2234678899999996 8776543
No 302
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.058 Score=48.47 Aligned_cols=77 Identities=26% Similarity=0.363 Sum_probs=49.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-EecCCCCCccHHHHHHHHhC--CCccEEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV 270 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~-vi~~~~~~~~~~~~~~~~~~--~~~d~v~ 270 (380)
.+++++|+|+ |.+|...+..+...|+ +|++++++.++.+.. .+... ..|..+.+ .+.+.+..... +.+|++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~-~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTDDA-SVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCCHH-HHHHHHHHHHHhCCCCCEEE
Confidence 3568999997 9999998888888899 899998887655432 12222 22333321 23333333322 3689999
Q ss_pred EcccC
Q 016933 271 ECTGN 275 (380)
Q Consensus 271 d~~g~ 275 (380)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99985
No 303
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.15 E-value=0.21 Score=40.62 Aligned_cols=74 Identities=23% Similarity=0.321 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH-HHhcCCce-EecCCCCCccHHHHHHHHhCCCccEEEE
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~-~~~lG~~~-vi~~~~~~~~~~~~~~~~~~~~~d~v~d 271 (380)
..+.+++|+|+|.+|...++.....|..+|++++++.++.+. .++++... .....+ ..+. -+++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD----LEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc----hhhc-----cccCCEEEe
Confidence 456889999999999998888888864489999998877654 44555421 011111 1111 136899999
Q ss_pred cccCh
Q 016933 272 CTGNI 276 (380)
Q Consensus 272 ~~g~~ 276 (380)
+++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98763
No 304
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.5 Score=40.94 Aligned_cols=74 Identities=19% Similarity=0.192 Sum_probs=46.2
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCCCccHHHHHHHHhCC--CccEEEEc
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVEC 272 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~~~~~~~~~~~~~~~--~~d~v~d~ 272 (380)
+++||+|+ |.+|...+..+... + +|++++++.++.+.+.+ ...-.++..+-.+. +.+++...+ ++|+++.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDP---EAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCH---HHHHHHHHhcCCCCEEEEC
Confidence 57999987 99998877766555 6 89999898877655543 21112232222221 223333322 69999999
Q ss_pred ccC
Q 016933 273 TGN 275 (380)
Q Consensus 273 ~g~ 275 (380)
.|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 875
No 305
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.12 E-value=0.067 Score=45.81 Aligned_cols=97 Identities=15% Similarity=0.249 Sum_probs=60.9
Q ss_pred cCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceEecCCCCCccHHHHHHHHhCCCc
Q 016933 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGV 266 (380)
Q Consensus 191 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l----G~~~vi~~~~~~~~~~~~~~~~~~~~~ 266 (380)
....++.+||-+|+|. |..++.+|+. |. +|++++.+++-.+.+++. +...+ .....+ +.+ . . ..+.+
T Consensus 26 l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d--~~~-~-~-~~~~f 96 (197)
T PRK11207 26 VKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD--LNN-L-T-FDGEY 96 (197)
T ss_pred cccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC--hhh-C-C-cCCCc
Confidence 3455678899998764 7777888875 77 999999999877766542 32211 111111 111 0 1 12369
Q ss_pred cEEEEccc----C----hhhHHHHHHHhhcCCcEEEEEc
Q 016933 267 DRSVECTG----N----IDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 267 d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~g 297 (380)
|+|+.... . ...+..+.+.|+++ |.++++.
T Consensus 97 D~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 97 DFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 99987533 1 24577888899997 9865543
No 306
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.12 E-value=0.19 Score=45.34 Aligned_cols=71 Identities=21% Similarity=0.248 Sum_probs=48.5
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC---CceEecCCCCCccHHHHHHHHhCCCccE
Q 016933 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (380)
Q Consensus 193 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG---~~~vi~~~~~~~~~~~~~~~~~~~~~d~ 268 (380)
..++++++|+|+|++|.+.+..+...|+ +|++++++.++.+.+ +.+. ....+. +.+ .....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~~----~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MDE----LPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hhh----hcccCccE
Confidence 3557899999999999998888888898 899998988775444 3332 211211 111 11136899
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
|++|++.
T Consensus 182 vInatp~ 188 (270)
T TIGR00507 182 IINATSA 188 (270)
T ss_pred EEECCCC
Confidence 9999876
No 307
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.16 Score=45.89 Aligned_cols=79 Identities=20% Similarity=0.247 Sum_probs=50.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E--ecCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v--i~~~~~~~~~~~~~~~~~--~~ 264 (380)
.++++||+|+ |.+|.+.+..+...|+ +|+.++++.++.+.+ +..|.+. . .|..+.+ .+.+.+.+.. -+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE-EVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHHHHHHHcC
Confidence 4678999987 9999998888888899 788888887665433 2234322 1 2332221 1222222221 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|++|++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999999873
No 308
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.19 Score=45.41 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=49.6
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc---eEe--cCCCCCccHHHHHHHHhC--
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFV--NTSEHDRPIQEVIAEMTN-- 263 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~---~vi--~~~~~~~~~~~~~~~~~~-- 263 (380)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+.+ .++ |..+. ..+.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ-NSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH-HHHHH-HHHHHHhc
Confidence 568999997 9999999888888899 88888888776544432 2221 122 33322 12333 433322
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 378999999874
No 309
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.10 E-value=0.26 Score=43.25 Aligned_cols=100 Identities=20% Similarity=0.224 Sum_probs=58.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh-------------------hHH----HHHHhcCCceEecCCCCCc
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTDFVNTSEHDR 252 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~-------------------~~~----~~~~~lG~~~vi~~~~~~~ 252 (380)
..+|+|+|.|++|..++..+-..|.++++.++.+. .|. +.++++..+.-+...+..
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~- 89 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEF- 89 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeee-
Confidence 36799999999999999999899998998887543 111 222233332111111110
Q ss_pred cH-HHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEc
Q 016933 253 PI-QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 253 ~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 297 (380)
+ .+....+....+|+|+||+.+......+.+......-.++..+
T Consensus 90 -i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~ 134 (231)
T cd00755 90 -LTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM 134 (231)
T ss_pred -cCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 1 1233444444699999999886654445555444313444443
No 310
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.09 E-value=0.18 Score=45.17 Aligned_cols=79 Identities=15% Similarity=0.220 Sum_probs=47.1
Q ss_pred CCCeEEEEcC-C--HHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceE--ecCCCCCccHHHHHHHHhC--
Q 016933 195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 263 (380)
Q Consensus 195 ~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~v--i~~~~~~~~~~~~~~~~~~-- 263 (380)
.|+++||+|+ + ++|.+.++.....|+ +|+...++++..+.+ ++.|.... .|..+.+ ...+.+++...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence 4688999997 4 799998877777899 788777764322222 22354332 3333322 12233332222
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+.+|+++++.|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 379999998763
No 311
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.21 Score=44.71 Aligned_cols=78 Identities=22% Similarity=0.324 Sum_probs=49.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E--ecCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v--i~~~~~~~~~~~~~~~~~--~~ 264 (380)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.. .+.+... + +|..+.+ .+.+.+.+.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYA-AVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence 5789999997 9999999988888999 899998887664333 2233221 2 2333221 1333333322 13
Q ss_pred CccEEEEccc
Q 016933 265 GVDRSVECTG 274 (380)
Q Consensus 265 ~~d~v~d~~g 274 (380)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998876
No 312
>PLN02253 xanthoxin dehydrogenase
Probab=95.08 E-value=0.15 Score=46.08 Aligned_cols=79 Identities=19% Similarity=0.217 Sum_probs=49.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC--c-eE--ecCCCCCccHHHHHHHHhC--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--T-DF--VNTSEHDRPIQEVIAEMTN--GG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~--~-~v--i~~~~~~~~~~~~~~~~~~--~~ 265 (380)
.++++||+|+ |.+|.+.+......|+ +|+.+++++++.+.+ .+++. . .. .|..+.+ .+.+.+..... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence 3678999987 9999998887777899 888888876654333 33321 1 12 2333321 12222322211 36
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 313
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.19 Score=46.48 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=49.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc-----CCc-eE--ecCCCCCccHHHHHHHHh--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVT-DF--VNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~-~l-----G~~-~v--i~~~~~~~~~~~~~~~~~-- 262 (380)
.+++++|+|+ +++|.+.+..+...|+ +|+.++++.++.+.+. ++ +.. .+ +|..+.+ ...+.+.++.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~-sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLA-SVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHH-HHHHHHHHHHHh
Confidence 4689999997 9999998888878899 8888889877654332 22 111 12 2333322 1222222222
Q ss_pred CCCccEEEEcccC
Q 016933 263 NGGVDRSVECTGN 275 (380)
Q Consensus 263 ~~~~d~v~d~~g~ 275 (380)
.+.+|++|++.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2378999998874
No 314
>PRK08589 short chain dehydrogenase; Validated
Probab=95.06 E-value=0.16 Score=45.74 Aligned_cols=79 Identities=23% Similarity=0.306 Sum_probs=48.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce---EecCCCCCccHHHHHHHHh--CCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~---lG~~~---vi~~~~~~~~~~~~~~~~~--~~~ 265 (380)
+++++||+|+ +.+|.+.+......|+ +|+.++++++..+.+++ .+... ..|..+.+ ...+.+.... -+.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQ-QVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHHHcCC
Confidence 4689999997 9999998888878899 88888888433333333 33221 23333321 1222232222 136
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998874
No 315
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.06 E-value=0.2 Score=45.29 Aligned_cols=102 Identities=14% Similarity=0.215 Sum_probs=62.7
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCcEEEEEcCChh---HHHHH-HhcCCceE--ecCCCCCccHHHHHHHHh--C
Q 016933 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMT--N 263 (380)
Q Consensus 195 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vi~~~~~~~---~~~~~-~~lG~~~v--i~~~~~~~~~~~~~~~~~--~ 263 (380)
.++++||+|+ +++|.+.+......|+ +|+.++++++ +.+.+ ++++.... .|..+.+ ...+.+.+.. -
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE-HFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH-HHHHHHHHHHHHc
Confidence 4689999986 4899998888888899 8888877742 33322 34554332 3443322 1222233222 1
Q ss_pred CCccEEEEcccCh-----------------------------hhHHHHHHHhhcCCcEEEEEcCC
Q 016933 264 GGVDRSVECTGNI-----------------------------DNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 264 ~~~d~v~d~~g~~-----------------------------~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
+.+|+++++.|.. .....++..+.++ |+++.++..
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 4799999998841 0234455667775 888887654
No 316
>PRK08643 acetoin reductase; Validated
Probab=95.06 E-value=0.22 Score=44.22 Aligned_cols=78 Identities=21% Similarity=0.257 Sum_probs=49.7
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-Ee--cCCCCCccHHHHHHHHh--CCC
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-vi--~~~~~~~~~~~~~~~~~--~~~ 265 (380)
++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+... .+ |..+.+ ...+.+.+.. -++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 568999987 9999998888888899 89999888766544322 23322 12 332222 1223233322 136
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 317
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.06 E-value=0.15 Score=45.30 Aligned_cols=79 Identities=22% Similarity=0.356 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCce-E--ecCCCCCccHHHHHHHHh--CCCc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV 266 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~--~~~~~~~lG~~~-v--i~~~~~~~~~~~~~~~~~--~~~~ 266 (380)
+++++||+|+ +++|.+.++.....|+ +|+.++++.. ..+.+++.+.+. . .|..+.+ .+.+.+.+.. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence 4789999997 9999999988888999 8887766542 223344455432 2 2333322 2333333221 2369
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999874
No 318
>PRK08317 hypothetical protein; Provisional
Probab=95.05 E-value=0.13 Score=45.01 Aligned_cols=102 Identities=25% Similarity=0.362 Sum_probs=68.2
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhc--C--Cce-EecCCCCCccHHHHHHHH
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF--G--VTD-FVNTSEHDRPIQEVIAEM 261 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vi~~~~~~~~~~~~~~l--G--~~~-vi~~~~~~~~~~~~~~~~ 261 (380)
.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++. . ... ++..+... + ..
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~-----~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG--L-----PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc--C-----CC
Confidence 4566788999999999875 888889998773 23899999999988888764 1 111 11111110 0 01
Q ss_pred hCCCccEEEEcc-----c-ChhhHHHHHHHhhcCCcEEEEEcC
Q 016933 262 TNGGVDRSVECT-----G-NIDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 262 ~~~~~d~v~d~~-----g-~~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
..+.+|+|+-.. . ....+..+.++|+++ |.+++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 125 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT 125 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence 224688877532 1 224678999999997 99887653
No 319
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.04 E-value=0.18 Score=46.97 Aligned_cols=34 Identities=38% Similarity=0.485 Sum_probs=30.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
..+|+|+|+|++|...++.+...|.++++.++.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3679999999999999999989999999999875
No 320
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.2 Score=44.55 Aligned_cols=75 Identities=21% Similarity=0.358 Sum_probs=46.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~-~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
.++++||+|+ |++|...++.....|+ +|++++++. ++.+...+ +....+..+-.+ . +.+.+.. +.+|+++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~--~-~~~~~~~-~~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK--E-ESLDKQL-ASLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC--H-HHHHHhc-CCCCEEEEC
Confidence 3578999997 9999999888888899 888887776 33222211 111222112121 1 1233332 369999999
Q ss_pred ccC
Q 016933 273 TGN 275 (380)
Q Consensus 273 ~g~ 275 (380)
.|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 875
No 321
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.02 E-value=0.16 Score=46.84 Aligned_cols=88 Identities=17% Similarity=0.279 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++.++.. +...+.... .+.+.+ . ..|+|+.+..
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~~----~l~e~l----~-~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGRE----ELSAFL----S-QTRVLINLLP 199 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeecccc----cHHHHH----h-cCCEEEECCC
Confidence 57899999999999999999999999 8999987654321 221111100 122222 1 3577776665
Q ss_pred Chhh----H-HHHHHHhhcCCcEEEEEcC
Q 016933 275 NIDN----M-ISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 275 ~~~~----~-~~~~~~l~~~~G~~v~~g~ 298 (380)
..+. + ...++.++++ ..++.+|-
T Consensus 200 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 3221 1 2456667775 66666653
No 322
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.02 E-value=0.24 Score=45.85 Aligned_cols=78 Identities=22% Similarity=0.324 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC---Cc-eE--ecCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG---VT-DF--VNTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG---~~-~v--i~~~~~~~~~~~~~~~~~--~~ 264 (380)
+++++||+|+ |.+|...+......|+ +|+.++++.++.+.+ +++. .. .+ .|..+.+ ...+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD-SVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence 4678999997 9999998888888898 899998888775543 3332 11 12 2333221 1222222221 23
Q ss_pred CccEEEEccc
Q 016933 265 GVDRSVECTG 274 (380)
Q Consensus 265 ~~d~v~d~~g 274 (380)
.+|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999987
No 323
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.02 E-value=0.21 Score=41.00 Aligned_cols=79 Identities=28% Similarity=0.344 Sum_probs=48.0
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCC--hhHHHHH----HhcCCce-EecCCCCC-ccHHHHHHHHh--CCC
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS--SKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 265 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~--~~~~~~~----~~lG~~~-vi~~~~~~-~~~~~~~~~~~--~~~ 265 (380)
+++||+|+ +++|...+......|..+|+.+.++ .++.+.+ +..+... ++..+-.+ ..+...+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899997 9999997777777777688888888 4443333 3345322 22222122 12333333332 237
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999885
No 324
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.02 E-value=0.22 Score=43.94 Aligned_cols=80 Identities=21% Similarity=0.240 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-EecCCCCC-ccHHHHHHHHhC--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-vi~~~~~~-~~~~~~~~~~~~--~~ 265 (380)
+++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ .+... ++..+-.+ ..+.+.+..... ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999997 9999999888888899 89888888776544322 23222 22222222 113333333221 36
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|.+.|.
T Consensus 81 ~d~vi~~ag~ 90 (250)
T TIGR03206 81 VDVLVNNAGW 90 (250)
T ss_pred CCEEEECCCC
Confidence 8999999873
No 325
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.01 E-value=0.22 Score=44.40 Aligned_cols=77 Identities=26% Similarity=0.364 Sum_probs=48.1
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCceEecCCCCC-ccHHHHHHHHh--CCCccEE
Q 016933 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHD-RPIQEVIAEMT--NGGVDRS 269 (380)
Q Consensus 198 ~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~----~lG~~~vi~~~~~~-~~~~~~~~~~~--~~~~d~v 269 (380)
++||+|+ +++|.+.+......|+ +|+.+++++++.+.+. +.+....+..+-.+ ..+.+.+++.. -+++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899987 9999998888888899 8999988877654332 22322222222222 11333333222 2379999
Q ss_pred EEcccC
Q 016933 270 VECTGN 275 (380)
Q Consensus 270 ~d~~g~ 275 (380)
+++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 999874
No 326
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.00 E-value=0.074 Score=48.40 Aligned_cols=96 Identities=23% Similarity=0.300 Sum_probs=58.4
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eEecCCCCCccHHHHHHHHhCCCcc
Q 016933 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVD 267 (380)
Q Consensus 193 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~-~vi~~~~~~~~~~~~~~~~~~~~~d 267 (380)
.++|++||=+|.| .|.+++..+| +|+++|++++.++...+.+++ -|.. .+......+ . ..+.||
T Consensus 159 ~~~g~~vLDvG~G-SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~--~-------~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVGCG-SGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED--L-------VEGKFD 227 (295)
T ss_dssp SSTTSEEEEES-T-TSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC--T-------CCS-EE
T ss_pred ccCCCEEEEeCCc-HHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc--c-------ccccCC
Confidence 5778888878764 2555555444 699899999999987766655 2322 221111111 1 124799
Q ss_pred EEEEcccChh---hHHHHHHHhhcCCcEEEEEcCCC
Q 016933 268 RSVECTGNID---NMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 268 ~v~d~~g~~~---~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
+|+-.+-..- ......++++++ |.+++.|...
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 9986655422 344566778886 9999988764
No 327
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.13 Score=45.70 Aligned_cols=75 Identities=23% Similarity=0.365 Sum_probs=47.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eE--ecCCCCCccHHHHHHHHh--CCCccE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMT--NGGVDR 268 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~-~v--i~~~~~~~~~~~~~~~~~--~~~~d~ 268 (380)
.++++||+|+ |.+|...++.+...|+ +|+.++++.++ +..+.. .+ .|..+.+ .+.+.+.... -+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPD-QVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 4689999987 9999998888888899 88888887765 112221 12 2332221 1223232221 136899
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999874
No 328
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.18 Score=44.69 Aligned_cols=79 Identities=22% Similarity=0.269 Sum_probs=49.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eEe--cCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFV--NTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~-~vi--~~~~~~~~~~~~~~~~~~--~ 264 (380)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ |..+.. ...+.+++... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEME-QIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence 3578999987 9999999988888899 89999888766544332 2322 122 332221 12222332221 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|+++++.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 329
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.97 E-value=0.31 Score=39.23 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=28.0
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
+|+|+|+|++|...+..+-..|.++++.++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999888888754
No 330
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.97 E-value=0.13 Score=45.76 Aligned_cols=79 Identities=16% Similarity=0.287 Sum_probs=49.3
Q ss_pred CCCeEEEEcCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--E--ecCCCCC--ccHHHHHHHHhCCC
Q 016933 195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHD--RPIQEVIAEMTNGG 265 (380)
Q Consensus 195 ~g~~vlI~G~g---~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~--v--i~~~~~~--~~~~~~~~~~~~~~ 265 (380)
.++++||+|++ ++|.+.++.....|+ +|+.+.++++..+.++++.... . .|..+.+ ..+.+.+.+.. +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV-GK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence 46899999874 899998888888899 8888877754444455542211 2 2333221 11223333322 47
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++++.|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998873
No 331
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.22 Score=44.85 Aligned_cols=79 Identities=22% Similarity=0.405 Sum_probs=50.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc---C--Cc-eEe--cCCCCCccHHHHHHHHhC-
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---G--VT-DFV--NTSEHDRPIQEVIAEMTN- 263 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~-~l---G--~~-~vi--~~~~~~~~~~~~~~~~~~- 263 (380)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.+... ++ + .. .++ |..+.+ .+.+.+.....
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDED-QVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHH-HHHHHHHHHHHH
Confidence 3679999997 9999999998888999 8999988876644332 22 1 11 122 332221 23333333221
Q ss_pred -CCccEEEEcccC
Q 016933 264 -GGVDRSVECTGN 275 (380)
Q Consensus 264 -~~~d~v~d~~g~ 275 (380)
+++|++|.+.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (276)
T PRK05875 84 HGRLHGVVHCAGG 96 (276)
T ss_pred cCCCCEEEECCCc
Confidence 368999999873
No 332
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.21 Score=44.50 Aligned_cols=79 Identities=22% Similarity=0.240 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c-----CCce-E--ecCCCCCccHHHHHHHHh--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-F--VNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-l-----G~~~-v--i~~~~~~~~~~~~~~~~~-- 262 (380)
.++++||+|+ |++|...+......|+ +|+.+++++++.+.+.+ + +... + .|..+.+ .+.+.+....
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAA-SVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHH-HHHHHHHHHHHH
Confidence 4688999997 9999998888888899 88888888776554332 2 2211 2 2332221 1223232221
Q ss_pred CCCccEEEEcccC
Q 016933 263 NGGVDRSVECTGN 275 (380)
Q Consensus 263 ~~~~d~v~d~~g~ 275 (380)
-+.+|+++++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 1379999999874
No 333
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.95 E-value=0.16 Score=45.30 Aligned_cols=79 Identities=28% Similarity=0.300 Sum_probs=49.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce---EecCCCCCccHHHHHHHHh--CCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~---lG~~~---vi~~~~~~~~~~~~~~~~~--~~~ 265 (380)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++...+..++ .+.+. ..|..+.+ ...+.+.+.. -+.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence 3678999997 9999998888888899 88888887543333333 34332 23333321 1223333322 137
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++++++|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 9999999873
No 334
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.95 E-value=0.24 Score=43.83 Aligned_cols=33 Identities=33% Similarity=0.449 Sum_probs=29.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
.+|+|+|+|++|..+++.+...|.++++.++.+
T Consensus 25 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 25 SRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 679999999999999999999999888888654
No 335
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.95 E-value=0.43 Score=36.66 Aligned_cols=92 Identities=22% Similarity=0.287 Sum_probs=61.8
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccChhh
Q 016933 199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 278 (380)
Q Consensus 199 vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 278 (380)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+..+. +.+++..-..++.++-+++....
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~---~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATDP---EVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTSH---HHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchhh---hHHhhcCccccCEEEEccCCHHH
Confidence 5788999999999999998665 899999999999999999964 443333332 23444333378999888877433
Q ss_pred ---HHHHHHHhhcCCcEEEEE
Q 016933 279 ---MISAFECVHDGWGVAVLV 296 (380)
Q Consensus 279 ---~~~~~~~l~~~~G~~v~~ 296 (380)
+...++.+.+. .+++..
T Consensus 76 n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHCCC-CeEEEE
Confidence 22344444554 555533
No 336
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.95 E-value=0.022 Score=46.43 Aligned_cols=96 Identities=21% Similarity=0.172 Sum_probs=56.7
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCC----CCccHHHHHHHHhCCCccEEEEccc
Q 016933 199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE----HDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 199 vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~----~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
|+|+|+|++|.+.+..++..|. .|..+.+++ +.+.+++-|........+ ........ ....+.+|++|-|+=
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888877998 898898888 888787766532111100 00000000 112247999999986
Q ss_pred Chhh---HHHHHHHhhcCCcEEEEEcCC
Q 016933 275 NIDN---MISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 275 ~~~~---~~~~~~~l~~~~G~~v~~g~~ 299 (380)
..+. +..+...+.++ ..++++...
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~qNG 103 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQNG 103 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEESSS
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEeCC
Confidence 6332 33333334443 566666543
No 337
>PRK09242 tropinone reductase; Provisional
Probab=94.94 E-value=0.2 Score=44.58 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----c--CCce-E--ecCCCCCccHHHHHHHHh--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTD-F--VNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----l--G~~~-v--i~~~~~~~~~~~~~~~~~-- 262 (380)
.++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ . +.+. . .|..+.+ .+.+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDE-DRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH-HHHHHHHHHHHH
Confidence 4789999997 9999999998888999 89998888876554432 1 2221 1 2332221 1222222221
Q ss_pred CCCccEEEEcccC
Q 016933 263 NGGVDRSVECTGN 275 (380)
Q Consensus 263 ~~~~d~v~d~~g~ 275 (380)
-+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 1379999999985
No 338
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.94 E-value=0.54 Score=40.58 Aligned_cols=116 Identities=17% Similarity=0.128 Sum_probs=70.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~-~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
.|++|||+|+|.+|.-=+.+....|+ +|+++.... +.+..+.+-+-...+. ...+ . ..+ ..+++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~~~----~--~~~--~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-REFD----A--EDL--DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cccC----h--hhh--cCceEEEEeC
Confidence 46899999999999998888889999 777775554 3333333322211111 1111 0 011 1488999999
Q ss_pred cChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccccccccccEEEee
Q 016933 274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 321 (380)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 321 (380)
+.++.-....+...+. +..+.+........+.++...-...+++.-+
T Consensus 81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIs 127 (210)
T COG1648 81 DDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQIAIS 127 (210)
T ss_pred CCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEEEEE
Confidence 9866666777777775 8888776655444444433322244455433
No 339
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.52 Score=41.42 Aligned_cols=80 Identities=19% Similarity=0.170 Sum_probs=46.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHH----HHHhcCCce-EecCCCCC-ccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTD-FVNTSEHD-RPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~-~~~~----~~~~lG~~~-vi~~~~~~-~~~~~~~~~~~--~~ 264 (380)
+++++||+|+ |.+|...+......|+ +++.+.++. ++.+ .+++.+... .+..+-.+ ..+.+.+.+.. -+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4688999987 9999999988888899 666665543 2222 223334321 22222122 11223233221 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 340
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.92 E-value=0.11 Score=46.56 Aligned_cols=80 Identities=21% Similarity=0.265 Sum_probs=51.2
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh----HHHHHHhcC-C-ceEecCCCCC--ccHHHHHHHHhCC
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKFG-V-TDFVNTSEHD--RPIQEVIAEMTNG 264 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~----~~~~~~~lG-~-~~vi~~~~~~--~~~~~~~~~~~~~ 264 (380)
-+|+.|||+|+ +++|.+.++-...+|+ +++..+.+.+ ..+.+++.| + .++.|..+.+ ....+++++.. |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-G 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-C
Confidence 46899999987 8999886666666788 7877777654 334444445 2 2345554433 12334444433 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|++++.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999998884
No 341
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.19 Score=44.82 Aligned_cols=79 Identities=20% Similarity=0.219 Sum_probs=49.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce-E--ecCCCCCccHHHHHHHHh--CCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~---lG~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 265 (380)
.++++||+|+ |.+|...+..+...|+ +|+.++++++..+.+++ .+... . .|..+. ..+.+.+.+.. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDP-ASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence 4688999987 9999998888888899 89999887754444333 23321 2 222221 11222222221 136
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998884
No 342
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.19 Score=44.63 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=48.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh-H-HHH---HHhcCCce-Ee--cCCCCCccHHHHHHHHh--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-R-FEE---AKKFGVTD-FV--NTSEHDRPIQEVIAEMT--N 263 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~-~-~~~---~~~lG~~~-vi--~~~~~~~~~~~~~~~~~--~ 263 (380)
+++++||+|+ +.+|.+.++.....|+ +|+.++++.+ . .+. +++.+... .+ |..+.+ .+.+.+.+.. -
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKA-DLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 4679999987 9999999998888999 8888877643 2 222 23334322 22 332221 1333333322 1
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+.+|+++++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 478999999884
No 343
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.87 E-value=0.21 Score=44.25 Aligned_cols=76 Identities=22% Similarity=0.346 Sum_probs=50.1
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-E--ecCCCCCccHHHHHHHHhC--CCccEEE
Q 016933 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVDRSV 270 (380)
Q Consensus 198 ~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~-v--i~~~~~~~~~~~~~~~~~~--~~~d~v~ 270 (380)
+++|+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ ++.+. . .|..+.+ .+.+.+..... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRA-AIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 6899997 9999998888888899 89999998887765544 44322 1 2332221 23333333222 3699999
Q ss_pred EcccC
Q 016933 271 ECTGN 275 (380)
Q Consensus 271 d~~g~ 275 (380)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 344
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.86 E-value=0.26 Score=43.89 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=48.4
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCc--eEecCCCCC-ccHHHHHHHHhC--C
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT--DFVNTSEHD-RPIQEVIAEMTN--G 264 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-----lG~~--~vi~~~~~~-~~~~~~~~~~~~--~ 264 (380)
++++||+|+ |.+|...+......|+ +|+.++++.++.+.+.+ .+.. ..+..+-.+ ......+.+... +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999997 9999998888888899 88888888765543321 2211 122222222 112222322221 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++++.|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 78999999873
No 345
>PRK08264 short chain dehydrogenase; Validated
Probab=94.86 E-value=0.15 Score=44.67 Aligned_cols=75 Identities=19% Similarity=0.277 Sum_probs=48.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eEe--cCCCCCccHHHHHHHHhCCCccEEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFV--NTSEHDRPIQEVIAEMTNGGVDRSV 270 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~-~vi--~~~~~~~~~~~~~~~~~~~~~d~v~ 270 (380)
.++++||+|+ |.+|...+..+...|+.+|+.++++.++.+. .+.. .++ |..+.+ .+.+.+... +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~-~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPA-SVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHH-HHHHHHHhc--CCCCEEE
Confidence 4578999987 9999999998888898678888888776543 2221 122 322221 122222221 2589999
Q ss_pred EcccC
Q 016933 271 ECTGN 275 (380)
Q Consensus 271 d~~g~ 275 (380)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 99886
No 346
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.83 E-value=0.36 Score=37.99 Aligned_cols=95 Identities=18% Similarity=0.314 Sum_probs=58.9
Q ss_pred EEEEcC-CHHHHHHHHHHHHcC--CcEEEEEcCChh--H-HHHHHhcCCceEecCCCCC-ccHHH---------------
Q 016933 199 VAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSK--R-FEEAKKFGVTDFVNTSEHD-RPIQE--------------- 256 (380)
Q Consensus 199 vlI~G~-g~~G~~ai~la~~~g--~~~vi~~~~~~~--~-~~~~~~lG~~~vi~~~~~~-~~~~~--------------- 256 (380)
|.|+|+ |.+|.-++.+.+... . +|+++..... + .+.++++.+..+...++.. ..+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578898 999999999999886 5 6766654332 2 3455668888876555431 11111
Q ss_pred -HHHHHhC-CCccEEEEcccChhhHHHHHHHhhcCCcEEEE
Q 016933 257 -VIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVL 295 (380)
Q Consensus 257 -~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 295 (380)
.+.++.. ..+|+++.++.+-.-+.-.+.+++.+ -++.+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~iaL 119 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIAL 119 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEEE
Confidence 2223333 37899998877767788888888874 44443
No 347
>PRK08328 hypothetical protein; Provisional
Probab=94.82 E-value=0.25 Score=43.39 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=29.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
+.+|+|+|+|++|...+..+...|.++++.++.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4679999999999999999999999888888743
No 348
>PRK06720 hypothetical protein; Provisional
Probab=94.81 E-value=0.39 Score=39.97 Aligned_cols=80 Identities=21% Similarity=0.177 Sum_probs=47.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-EecCCCCC-ccHHHHHHHHh--CCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi~~~~~~-~~~~~~~~~~~--~~~ 265 (380)
+++.++|+|+ +++|...+......|+ +|+.++++.++.+.. ++.+... .+..+-.+ ..+.+.+.+.. -+.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4688999997 8899998887777898 898888877654332 2234322 22222222 11222222211 136
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++++.|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8888888764
No 349
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.80 E-value=0.25 Score=43.92 Aligned_cols=79 Identities=22% Similarity=0.321 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E--ecCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v--i~~~~~~~~~~~~~~~~~~--~ 264 (380)
++++++|+|+ |.+|...+......|+ +|+.+++++++.+.+ ++.|... . .|..+. ..+.+.+..... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE-EAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence 5789999997 9999998887777899 899998887664433 2334322 2 233222 123333333221 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|+++.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999999884
No 350
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.52 Score=42.93 Aligned_cols=81 Identities=21% Similarity=0.169 Sum_probs=47.1
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-H----HHHHhcCCce-EecCCCCC-ccHHHHHHHHh--C
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-F----EEAKKFGVTD-FVNTSEHD-RPIQEVIAEMT--N 263 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~-~----~~~~~lG~~~-vi~~~~~~-~~~~~~~~~~~--~ 263 (380)
-+++++||+|+ |.+|...+......|+ +|+.+.+++++ . +.++..|.+. ++..+-.+ ..+.+.+.+.. -
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34688999997 9999998887777899 78887766422 2 2223334322 22222221 11222222221 1
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+++|++|.+.|.
T Consensus 123 ~~iD~lI~~Ag~ 134 (290)
T PRK06701 123 GRLDILVNNAAF 134 (290)
T ss_pred CCCCEEEECCcc
Confidence 368999998874
No 351
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.78 E-value=0.24 Score=44.31 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=47.1
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceE--ecCCCCC--ccHHHHHHHHhC
Q 016933 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHD--RPIQEVIAEMTN 263 (380)
Q Consensus 195 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~v--i~~~~~~--~~~~~~~~~~~~ 263 (380)
+++++||+|+ +++|.+.+......|+ +|+...+.++..+.+++ .|.... .|..+.+ ..+.+.+.+..
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW- 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh-
Confidence 4678999984 4899998888878899 78777655433333333 343222 2333221 11223333322
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 379999999874
No 352
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.78 E-value=0.23 Score=44.19 Aligned_cols=78 Identities=26% Similarity=0.339 Sum_probs=50.4
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-Ee--cCCCCCccHHHHHHHHh--CCCccE
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FV--NTSEHDRPIQEVIAEMT--NGGVDR 268 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~-vi--~~~~~~~~~~~~~~~~~--~~~~d~ 268 (380)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ ++... .+ |..+.+ ...+.+.+.. -+.+|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQD-SIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 578999997 9999998888888899 89999898877655443 33211 12 222221 1222222221 136899
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
++.+.|.
T Consensus 84 li~~ag~ 90 (257)
T PRK07067 84 LFNNAAL 90 (257)
T ss_pred EEECCCc
Confidence 9998763
No 353
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.76 E-value=0.25 Score=43.95 Aligned_cols=79 Identities=24% Similarity=0.309 Sum_probs=48.7
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCc--eEecCCCCCc-cHHHHHHHHhC--CCccE
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT--DFVNTSEHDR-PIQEVIAEMTN--GGVDR 268 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~--~vi~~~~~~~-~~~~~~~~~~~--~~~d~ 268 (380)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ +... ..+..+-.+. .+.+.+.+... +++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999997 9999998887777898 89999888776654432 3211 1222222221 12222322211 36899
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
++.+.|.
T Consensus 81 vi~~ag~ 87 (257)
T PRK07074 81 LVANAGA 87 (257)
T ss_pred EEECCCC
Confidence 9999874
No 354
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.75 E-value=0.26 Score=45.23 Aligned_cols=79 Identities=15% Similarity=0.266 Sum_probs=49.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc-----CCc-eE--ecCCCCCccHHHHHHHHhC-
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVT-DF--VNTSEHDRPIQEVIAEMTN- 263 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~l-----G~~-~v--i~~~~~~~~~~~~~~~~~~- 263 (380)
.++++||+|+ |.+|...+......|+ +|+.+.++.++.+.+ +++ +.. .+ .|..+.+ ...+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLA-SVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHH-HHHHHHHHHHhh
Confidence 5689999997 9999998887777899 888888887664432 111 111 12 2332221 13233333221
Q ss_pred -CCccEEEEcccC
Q 016933 264 -GGVDRSVECTGN 275 (380)
Q Consensus 264 -~~~d~v~d~~g~ 275 (380)
+++|++|.+.|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 369999999873
No 355
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.24 Score=43.75 Aligned_cols=77 Identities=27% Similarity=0.481 Sum_probs=48.6
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----c--CCc-eE--ecCCCCCccHHHHHHHHhC--
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVT-DF--VNTSEHDRPIQEVIAEMTN-- 263 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----l--G~~-~v--i~~~~~~~~~~~~~~~~~~-- 263 (380)
++++||+|+ |.+|...+......|+ +|+.++++.++.+.+.+ . +.. .+ .|..+.+ .+.+.+.++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHD-QVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 468999997 9999987777777798 88888888877654432 1 221 12 2333321 23333333221
Q ss_pred CCccEEEEccc
Q 016933 264 GGVDRSVECTG 274 (380)
Q Consensus 264 ~~~d~v~d~~g 274 (380)
+++|++|.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 36999999987
No 356
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.72 E-value=0.083 Score=46.71 Aligned_cols=107 Identities=21% Similarity=0.249 Sum_probs=66.7
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceEec--CCC-CCccHHHHH
Q 016933 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVN--TSE-HDRPIQEVI 258 (380)
Q Consensus 187 l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vi~~~~~~~~~~~~~~----lG~~~vi~--~~~-~~~~~~~~~ 258 (380)
+....+++||++|+=-|.| .|.++..+++..| -++|+..+..+++.+.+++ .|....+. ..+ ....+.+
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~-- 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDE-- 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--ST--
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccc--
Confidence 4556889999999987754 3667778887775 3499999999998887765 56543211 111 1111210
Q ss_pred HHHhCCCccEE-EEcccChhhHHHHHHHh-hcCCcEEEEEcCC
Q 016933 259 AEMTNGGVDRS-VECTGNIDNMISAFECV-HDGWGVAVLVGVP 299 (380)
Q Consensus 259 ~~~~~~~~d~v-~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~ 299 (380)
. ....+|.| +|.-.....+..+.+.| +++ |+++.+-..
T Consensus 109 -~-~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~ 148 (247)
T PF08704_consen 109 -E-LESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPC 148 (247)
T ss_dssp -T--TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESS
T ss_pred -c-ccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCC
Confidence 0 12367876 66666667899999999 886 999988653
No 357
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.71 E-value=0.32 Score=43.24 Aligned_cols=80 Identities=21% Similarity=0.304 Sum_probs=48.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCce-EecCCCCC-ccHHHHHHHHhC--CCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~--~~~~~~~lG~~~-vi~~~~~~-~~~~~~~~~~~~--~~~d 267 (380)
.|+++||+|+ |.+|.+.++.....|+ +|+.+++++. ..+.+++.+... .+..+-.+ ....+.+.+... +.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3689999997 9999999998888899 8887765432 233344444322 22222222 112222322211 3799
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+++++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999874
No 358
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.71 E-value=0.59 Score=41.06 Aligned_cols=106 Identities=20% Similarity=0.271 Sum_probs=72.5
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceEecCCCCCccHHHHHHHHhCC
Q 016933 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG 264 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l----G~~~vi~~~~~~~~~~~~~~~~~~~ 264 (380)
.....++|++||=+++| +|-+|+.+++..|-.+|+++|.+++-++.+++- |... +.+-..+ . +.+. +...
T Consensus 45 ~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d--A-e~LP-f~D~ 118 (238)
T COG2226 45 SLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD--A-ENLP-FPDN 118 (238)
T ss_pred HhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec--h-hhCC-CCCC
Confidence 34455689999877654 688999999999866999999999998888763 2221 1111111 0 0011 1223
Q ss_pred CccEEEEcccC------hhhHHHHHHHhhcCCcEEEEEcCCCC
Q 016933 265 GVDRSVECTGN------IDNMISAFECVHDGWGVAVLVGVPSK 301 (380)
Q Consensus 265 ~~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 301 (380)
.||+|.-+.|- +..+.++.+.|+|+ |+++++....+
T Consensus 119 sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 119 SFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred ccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 68888777663 35688999999997 99999987654
No 359
>PRK06398 aldose dehydrogenase; Validated
Probab=94.70 E-value=0.13 Score=46.00 Aligned_cols=74 Identities=20% Similarity=0.287 Sum_probs=47.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-EecCCCCCccHHHHHHHHhC--CCccEEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV 270 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~-vi~~~~~~~~~~~~~~~~~~--~~~d~v~ 270 (380)
.|+++||+|+ +.+|.+.+......|+ +|+.+++++++.. .... ..|..+.+ .+.+.+.+... +.+|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 4689999997 9999999988888999 8888888765432 1111 12333321 23333333221 3699999
Q ss_pred EcccC
Q 016933 271 ECTGN 275 (380)
Q Consensus 271 d~~g~ 275 (380)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98874
No 360
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.70 E-value=0.35 Score=44.71 Aligned_cols=89 Identities=22% Similarity=0.317 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
-.|+++.|+|.|.+|.+.+..++.+|. +|+..++++. .+..+..++.++- +.+.++ ..|++.-..
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~~--------l~ell~-----~sDii~l~~ 208 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYVD--------LDELLA-----ESDIISLHC 208 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceecc--------HHHHHH-----hCCEEEEeC
Confidence 358999999999999999999999999 9999988765 4444445554321 222222 357764443
Q ss_pred -cChhh---H-HHHHHHhhcCCcEEEEEcC
Q 016933 274 -GNIDN---M-ISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 274 -g~~~~---~-~~~~~~l~~~~G~~v~~g~ 298 (380)
..+++ + ...++.|+++ ..+|.++-
T Consensus 209 Plt~~T~hLin~~~l~~mk~g-a~lVNtaR 237 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPG-AILVNTAR 237 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence 33332 1 2677888886 77776654
No 361
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.69 E-value=0.25 Score=43.54 Aligned_cols=79 Identities=22% Similarity=0.243 Sum_probs=48.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH----HHhcCCce-Ee--cCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~----~~~lG~~~-vi--~~~~~~~~~~~~~~~~~~--~ 264 (380)
.++++||+|+ |.+|...+......|+ +|++++++.++... +++.+... ++ |..+. ..+.+.+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDR-AALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence 4578999997 9999998888877899 89999888654432 23333321 22 22221 112222222211 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|++|.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999999864
No 362
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.17 Score=44.24 Aligned_cols=73 Identities=23% Similarity=0.288 Sum_probs=47.2
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-EecCCCCCccHHHHHHHHhCC-CccEEEEc
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 272 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~-vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~ 272 (380)
++++||+|+ |.+|...+..+...|+ +|+.+.++.++ ...... ..|..+.+ .+.+.+.+.... +.|+++.+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADIE-QTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCHH-HHHHHHHHHHHhCCCcEEEEC
Confidence 578999997 9999998888888898 89888887654 112211 12332221 233333333322 68999998
Q ss_pred ccC
Q 016933 273 TGN 275 (380)
Q Consensus 273 ~g~ 275 (380)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 874
No 363
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.66 E-value=0.32 Score=42.35 Aligned_cols=95 Identities=25% Similarity=0.310 Sum_probs=63.0
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--EecCCCCCccHHHHHHHHhCCCccEEEE
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~--vi~~~~~~~~~~~~~~~~~~~~~d~v~d 271 (380)
-+|.+||=+|+|+ |+++.-+|+ +|+ .|++++.+++..+.++.-.... -++|... ..+.+... ++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~---~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQA---TVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchhh---hHHHHHhc-CCCccEEEE
Confidence 4678888888753 677777776 578 9999999999999887532221 1444432 22233222 148999976
Q ss_pred c-----ccChh-hHHHHHHHhhcCCcEEEEE
Q 016933 272 C-----TGNID-NMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 272 ~-----~g~~~-~~~~~~~~l~~~~G~~v~~ 296 (380)
. +..++ .+..+.+.++|+ |.+.+-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 3 44433 566899999997 877654
No 364
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.64 E-value=0.31 Score=42.96 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=47.2
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eE--ecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~-~v--i~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
.++||+|+ |.+|...+......|+ +|+.+++++++.+.+.+.+.. .. .|..+. ..+.+.+++. ....|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~-~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTDH-PGTKAALSQL-PFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH-HHHHHHHHhc-ccCCCEEEEc
Confidence 56899997 9999987777777899 899999998887766554321 11 233332 1233333332 2245776665
Q ss_pred cc
Q 016933 273 TG 274 (380)
Q Consensus 273 ~g 274 (380)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 365
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.64 E-value=0.31 Score=42.23 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=30.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
..+|+|+|+|++|...++.+...|.++++.++.+
T Consensus 28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4679999999999999999988999889988876
No 366
>PRK09186 flagellin modification protein A; Provisional
Probab=94.64 E-value=0.24 Score=43.91 Aligned_cols=78 Identities=19% Similarity=0.437 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc----CCce----EecCCCCCccHHHHHHHHhC-
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVTD----FVNTSEHDRPIQEVIAEMTN- 263 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~l----G~~~----vi~~~~~~~~~~~~~~~~~~- 263 (380)
+++++||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ +++ +... ..|..+.+ .+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence 4689999997 9999998888888899 888888887765443 222 2221 22333322 23333333222
Q ss_pred -CCccEEEEccc
Q 016933 264 -GGVDRSVECTG 274 (380)
Q Consensus 264 -~~~d~v~d~~g 274 (380)
+++|+++++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999885
No 367
>PLN02928 oxidoreductase family protein
Probab=94.64 E-value=0.28 Score=45.94 Aligned_cols=96 Identities=22% Similarity=0.310 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-----ceEecCCCCCccHHHHHHHHhCCCccEE
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-----TDFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~-----~~vi~~~~~~~~~~~~~~~~~~~~~d~v 269 (380)
.|++++|+|.|.+|...++.++.+|+ +|++.+++..+... ..++. ....+.......+.+.++ ..|+|
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~-----~aDiV 230 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAG-----EADIV 230 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHh-----hCCEE
Confidence 57899999999999999999999999 99999876332111 11110 000000000001323222 36888
Q ss_pred EEcccChh----hH-HHHHHHhhcCCcEEEEEcC
Q 016933 270 VECTGNID----NM-ISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 270 ~d~~g~~~----~~-~~~~~~l~~~~G~~v~~g~ 298 (380)
+-+..... .+ ...+..|+++ ..+|.++-
T Consensus 231 vl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 231 VLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 87765321 12 3667778886 77776653
No 368
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.63 E-value=0.31 Score=44.16 Aligned_cols=77 Identities=21% Similarity=0.221 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcCCH-HHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEE
Q 016933 193 PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (380)
Q Consensus 193 ~~~g~~vlI~G~g~-~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d 271 (380)
.-.|++++|+|.|. +|...++++...|+ +|++..+..+. +.+ .. ..+|+++.
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~---------------------L~~----~~-~~aDIvI~ 208 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN---------------------LPE----LV-KQADIIVG 208 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh---------------------HHH----Hh-ccCCEEEE
Confidence 35788999999976 99999999999999 88877542111 111 11 25899999
Q ss_pred cccChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 272 CTGNIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 272 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
++|.+..+. .+.++++ ..++.+|..
T Consensus 209 AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 209 AVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 999866443 3557886 777777754
No 369
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.60 E-value=0.08 Score=45.53 Aligned_cols=104 Identities=24% Similarity=0.303 Sum_probs=67.7
Q ss_pred cCCCCCCeEEEEcCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHhC-
Q 016933 191 AKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN- 263 (380)
Q Consensus 191 ~~~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~~- 263 (380)
.+..+.++||-+|.+ +|+.++.+|+.+ +. +|++++.++++.+.+++ .|...-+.....+ ..+.+.++..
T Consensus 41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~ 116 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELAND 116 (205)
T ss_dssp HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHT
T ss_pred HHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhc
Confidence 334455789999874 588899999877 34 99999999998888754 5654322222222 4444444432
Q ss_pred ---CCccEEE-EcccC--hhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 264 ---GGVDRSV-ECTGN--IDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 264 ---~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
+.||.|| |+-=. ...+..++++++++ |.++.-...
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l 157 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL 157 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence 3699985 54321 23577888999996 877766543
No 370
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.58 E-value=0.29 Score=45.58 Aligned_cols=37 Identities=32% Similarity=0.546 Sum_probs=33.1
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 232 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~ 232 (380)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 89999886543
No 371
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.58 E-value=0.31 Score=43.93 Aligned_cols=78 Identities=21% Similarity=0.330 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-E--ecCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~----~lG~~~-v--i~~~~~~~~~~~~~~~~~~--~ 264 (380)
++++++|+|+ |.+|.+.+..+...|+ +|+.++++.++.+.+. +.+... . .|..+.+ .+.+.+..... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKE-SLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence 4688999987 9999999988888899 8888888876543332 233321 2 2222221 12222222221 3
Q ss_pred CccEEEEccc
Q 016933 265 GVDRSVECTG 274 (380)
Q Consensus 265 ~~d~v~d~~g 274 (380)
.+|++|.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 372
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.58 E-value=0.26 Score=43.30 Aligned_cols=79 Identities=19% Similarity=0.353 Sum_probs=49.5
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-EecCCCCC-ccHHHHHHHHhC--CCc
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGV 266 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi~~~~~~-~~~~~~~~~~~~--~~~ 266 (380)
+.+++|+|+ |.+|...+..+...|+ +|+.++++.++.+.+ +..+... ++..+-.+ ..+.+.++.... +++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 578999987 9999998888778899 899998887665433 2233222 22222222 123333333221 378
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999874
No 373
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.57 E-value=0.49 Score=38.81 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=55.7
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce------EecCCC-CCccHHHHHHHHhCCCccEEE
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD------FVNTSE-HDRPIQEVIAEMTNGGVDRSV 270 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~------vi~~~~-~~~~~~~~~~~~~~~~~d~v~ 270 (380)
+|.|+|+|..|.+.+..+...|. +|....++++..+.+++-+... .+...- ...++.+.+ .+.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence 58899999999999999999997 9999999998888877643211 010000 001143333 2579999
Q ss_pred EcccChhhHHHHHHHhhc
Q 016933 271 ECTGNIDNMISAFECVHD 288 (380)
Q Consensus 271 d~~g~~~~~~~~~~~l~~ 288 (380)
-++.+ ......++.+.+
T Consensus 75 iavPs-~~~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPS-QAHREVLEQLAP 91 (157)
T ss_dssp E-S-G-GGHHHHHHHHTT
T ss_pred ecccH-HHHHHHHHHHhh
Confidence 99987 556677777766
No 374
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.56 E-value=0.29 Score=43.40 Aligned_cols=79 Identities=24% Similarity=0.365 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-Ee--cCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi--~~~~~~~~~~~~~~~~~--~~ 264 (380)
.++++||+|+ |.+|...+......|+ +|+.+++++++.+.+ +..+... .+ |..+.+ .+.+.+..+. -+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQ-EVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHH-HHHHHHHHHHHhcC
Confidence 4678999997 9999998888888899 898898887665433 2223322 22 322221 1222232221 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 375
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.55 E-value=0.31 Score=42.12 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=63.3
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHhC
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 263 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~~ 263 (380)
.....++++++||=+|+|. |..+..+++.. . +|++++.+++..+.+++ .|...+ .....+ ..+... ..
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~~~~~--~~ 142 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGD--GWKGWP--AY 142 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECC--cccCCC--cC
Confidence 4556788999999998753 55555666654 3 89999999887766654 444322 111111 100000 11
Q ss_pred CCccEEEEcccChhhHHHHHHHhhcCCcEEEEEc
Q 016933 264 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 264 ~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 297 (380)
+.||+|+-..........+.+.|+++ |+++..-
T Consensus 143 ~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 143 APFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 37999877655546677888999997 9887543
No 376
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.55 E-value=0.29 Score=46.72 Aligned_cols=81 Identities=21% Similarity=0.346 Sum_probs=50.5
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH-------HHHhc-CCceE-ecCCCCCccHHHHHHHH
Q 016933 192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-------EAKKF-GVTDF-VNTSEHDRPIQEVIAEM 261 (380)
Q Consensus 192 ~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~-------~~~~l-G~~~v-i~~~~~~~~~~~~~~~~ 261 (380)
....+.+|||+|+ |.+|...+..+...|+ +|++++++.++.+ ..... ++..+ .|..+.+ .+.+.++..
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~-~l~~~~~~~ 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDAD-SLRKVLFSE 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHH-HHHHHHHHh
Confidence 3456789999997 9999999988888898 8888888765421 11112 33222 2333321 233333322
Q ss_pred hCCCccEEEEcccC
Q 016933 262 TNGGVDRSVECTGN 275 (380)
Q Consensus 262 ~~~~~d~v~d~~g~ 275 (380)
+.++|+||+|.+.
T Consensus 134 -~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 -GDPVDVVVSCLAS 146 (390)
T ss_pred -CCCCcEEEECCcc
Confidence 1169999998864
No 377
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.54 E-value=0.4 Score=42.52 Aligned_cols=102 Identities=19% Similarity=0.200 Sum_probs=67.2
Q ss_pred cCCCCCCeEEEEcCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHh--
Q 016933 191 AKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 191 ~~~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~-- 262 (380)
.+..+.++||-+|. .+|+.++.+|+.+ +. ++++++.++++.+.+++ .|...-+.....+ ..+.+.++.
T Consensus 75 ~~~~~ak~iLEiGT-~~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~~ 150 (247)
T PLN02589 75 LKLINAKNTMEIGV-YTGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIED 150 (247)
T ss_pred HHHhCCCEEEEEeC-hhhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHhc
Confidence 44455678888886 3688888999877 34 89999999988777654 5643333333333 455555543
Q ss_pred ---CCCccEEEEcccC---hhhHHHHHHHhhcCCcEEEEEc
Q 016933 263 ---NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 263 ---~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g 297 (380)
.+.||.||-=... ...++.+++.++++ |.++.=.
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~DN 190 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYDN 190 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEcC
Confidence 2479998643332 24577889999996 8776543
No 378
>PLN00203 glutamyl-tRNA reductase
Probab=94.53 E-value=0.15 Score=50.37 Aligned_cols=82 Identities=18% Similarity=0.271 Sum_probs=56.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cC-Cce-EecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG-~~~-vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+.+ ++ ... +...+ .+.... ..+|+||.|
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~--------dl~~al-~~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD--------EMLACA-AEADVVFTS 336 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh--------hHHHHH-hcCCEEEEc
Confidence 6889999999999999999999998789999999888766654 53 221 11111 122221 268999999
Q ss_pred ccChhh--HHHHHHHh
Q 016933 273 TGNIDN--MISAFECV 286 (380)
Q Consensus 273 ~g~~~~--~~~~~~~l 286 (380)
++.+.. ....++.+
T Consensus 337 T~s~~pvI~~e~l~~~ 352 (519)
T PLN00203 337 TSSETPLFLKEHVEAL 352 (519)
T ss_pred cCCCCCeeCHHHHHHh
Confidence 887543 33455544
No 379
>PRK07985 oxidoreductase; Provisional
Probab=94.53 E-value=0.67 Score=42.34 Aligned_cols=79 Identities=19% Similarity=0.211 Sum_probs=46.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCCh--hHHHHH----HhcCCce-E--ecCCCCCccHHHHHHHHh--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~--~~~~~~----~~lG~~~-v--i~~~~~~~~~~~~~~~~~-- 262 (380)
+++++||+|+ |.+|.+.++.+...|+ +|+.+.++. ++.+.+ ++.|... . .|..+.+ .+.+.+.+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEK-FARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHH-HHHHHHHHHHHH
Confidence 5678999997 9999998888888899 787775432 222222 2334322 1 2332221 1223333322
Q ss_pred CCCccEEEEcccC
Q 016933 263 NGGVDRSVECTGN 275 (380)
Q Consensus 263 ~~~~d~v~d~~g~ 275 (380)
-+++|+++.+.|.
T Consensus 126 ~g~id~lv~~Ag~ 138 (294)
T PRK07985 126 LGGLDIMALVAGK 138 (294)
T ss_pred hCCCCEEEECCCC
Confidence 1378999998763
No 380
>PRK01581 speE spermidine synthase; Validated
Probab=94.51 E-value=0.85 Score=42.66 Aligned_cols=99 Identities=16% Similarity=0.100 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-----------ceEecCCCCCccHHHHHHHHh
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-----------TDFVNTSEHDRPIQEVIAEMT 262 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~-----------~~vi~~~~~~~~~~~~~~~~~ 262 (380)
...++|||+|+| .|.++..+++..+..+|++++.+++-.++++++.. ..+ ...-.| ..+.+.. .
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi~D--a~~fL~~-~ 223 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHVCD--AKEFLSS-P 223 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEECc--HHHHHHh-c
Confidence 445799999976 46677777777666699999999999999986210 111 000111 3333433 2
Q ss_pred CCCccEEEEcccC-----------hhhHHHHHHHhhcCCcEEEEEcC
Q 016933 263 NGGVDRSVECTGN-----------IDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 263 ~~~~d~v~d~~g~-----------~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
.+.||+||--... .+.+..+.+.|+++ |.++....
T Consensus 224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 3479997543321 23677889999997 99876643
No 381
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.51 E-value=0.24 Score=47.10 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
.+.+|+|+|+|++|..++..+...|+++++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999999999876
No 382
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.49 E-value=0.31 Score=42.87 Aligned_cols=80 Identities=20% Similarity=0.221 Sum_probs=49.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-EecCCCCC-ccHHHHHHHHhC--CCccE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR 268 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~~~-vi~~~~~~-~~~~~~~~~~~~--~~~d~ 268 (380)
++.++||+|+ |.+|...+......|+ .|+...++.++.+.+ .+++... ++..+-.+ ..+.+.+.+... +++|+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4678999997 9999998888888898 888887777666544 3344321 22222111 112222222211 36999
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999884
No 383
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.48 E-value=0.32 Score=38.73 Aligned_cols=94 Identities=21% Similarity=0.343 Sum_probs=54.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh-------------------hHHHH----HHhcCCc-eEecCCCCC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFEE----AKKFGVT-DFVNTSEHD 251 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~-------------------~~~~~----~~~lG~~-~vi~~~~~~ 251 (380)
..+|+|+|+|++|...+..+-..|+++++.++.+. .|.+. ++++... .+..+...
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~- 80 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK- 80 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc-
Confidence 46899999999999988888888998888886432 12222 2233221 12111111
Q ss_pred ccH-HHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEE
Q 016933 252 RPI-QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV 294 (380)
Q Consensus 252 ~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 294 (380)
+ .+...++. .++|+||+|+.+......+.+..... +.-.
T Consensus 81 --~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~ 120 (135)
T PF00899_consen 81 --IDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPF 120 (135)
T ss_dssp --CSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EE
T ss_pred --cccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCE
Confidence 1 12223332 26899999998865555555555554 4433
No 384
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.45 E-value=0.87 Score=40.15 Aligned_cols=102 Identities=17% Similarity=0.148 Sum_probs=58.8
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHH----HHHHhcCCce-E--ecCCCCCccHHHHHHHHhC--C
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRF----EEAKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~-~~~~~----~~~~~lG~~~-v--i~~~~~~~~~~~~~~~~~~--~ 264 (380)
+.++||+|+ |.+|...+.-....|+ +++.+.+ +.++. ..+++.+... . .|..+.+ .+...+.+... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE-GCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH-HHHHHHHHHHHHcC
Confidence 578999997 9999988887778899 6655543 32222 2233344322 2 2332221 12222222211 3
Q ss_pred CccEEEEcccCh-------------------------hhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 265 GVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 265 ~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
++|++|.+.|.. ...+.+.+.+++. |+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 789999999831 0133445566675 8999887643
No 385
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.45 E-value=0.39 Score=42.15 Aligned_cols=33 Identities=36% Similarity=0.423 Sum_probs=29.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 228 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~ 228 (380)
..+|+|+|+|++|...+..+-..|.++++.+|.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 478999999999999999999999988888854
No 386
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.44 E-value=0.41 Score=42.48 Aligned_cols=33 Identities=36% Similarity=0.453 Sum_probs=29.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 228 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~ 228 (380)
..+|+|+|+|++|..++..+...|.++++.++.
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~ 64 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDF 64 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 478999999999999999999999988888864
No 387
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.43 E-value=0.36 Score=43.53 Aligned_cols=82 Identities=22% Similarity=0.286 Sum_probs=48.4
Q ss_pred CCCCCeEEEEcC---CHHHHHHHHHHHHcCCcEEEEEcCCh---hHHHHH-HhcCCceEecCCCCC-ccHHHHHHHHhC-
Q 016933 193 PERGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKFGVTDFVNTSEHD-RPIQEVIAEMTN- 263 (380)
Q Consensus 193 ~~~g~~vlI~G~---g~~G~~ai~la~~~g~~~vi~~~~~~---~~~~~~-~~lG~~~vi~~~~~~-~~~~~~~~~~~~- 263 (380)
.-.++++||+|+ +++|.+.+......|+ +|+.+.+++ ++.+.+ +++|....+..+-.+ ....+.+.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 335689999986 5899998888888999 787776653 333323 334532222222222 112222332221
Q ss_pred -CCccEEEEcccC
Q 016933 264 -GGVDRSVECTGN 275 (380)
Q Consensus 264 -~~~d~v~d~~g~ 275 (380)
+.+|+++++.|.
T Consensus 86 ~g~iD~lv~nAG~ 98 (272)
T PRK08159 86 WGKLDFVVHAIGF 98 (272)
T ss_pred cCCCcEEEECCcc
Confidence 379999998873
No 388
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.41 E-value=0.42 Score=41.79 Aligned_cols=74 Identities=27% Similarity=0.395 Sum_probs=55.0
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh--cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccC
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK--FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~--lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 275 (380)
.++|+|+|.+|...++.+...|. .|++++.++++.+...+ +.. +++.-+..+ .+.++++--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~---~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDATD---EDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecCCC---HHHHHhcCCCcCCEEEEeeCC
Confidence 58899999999999999999998 89999999999877333 555 344333333 234555533489999999998
Q ss_pred h
Q 016933 276 I 276 (380)
Q Consensus 276 ~ 276 (380)
.
T Consensus 77 d 77 (225)
T COG0569 77 D 77 (225)
T ss_pred C
Confidence 3
No 389
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.40 E-value=0.39 Score=43.09 Aligned_cols=78 Identities=19% Similarity=0.285 Sum_probs=46.2
Q ss_pred CCCeEEEEcCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceE--ecCCCCCccHHHHHHHHhC--
Q 016933 195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMTN-- 263 (380)
Q Consensus 195 ~g~~vlI~G~g---~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~v--i~~~~~~~~~~~~~~~~~~-- 263 (380)
.++++||+|++ ++|.+.+......|+ +|+.++++++..+.+++ .+.... .|..+.+ .+.+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDA-SIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHH-HHHHHHHHHHhhc
Confidence 46889999973 799988887777899 78877776322222322 222122 2333221 23333333222
Q ss_pred CCccEEEEccc
Q 016933 264 GGVDRSVECTG 274 (380)
Q Consensus 264 ~~~d~v~d~~g 274 (380)
+.+|+++++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 36999999987
No 390
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.42 Score=42.07 Aligned_cols=76 Identities=17% Similarity=0.217 Sum_probs=47.6
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce--Ee--cCCCCCccHHHHHHHHhCCCcc
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FV--NTSEHDRPIQEVIAEMTNGGVD 267 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~--vi--~~~~~~~~~~~~~~~~~~~~~d 267 (380)
++++|+|+ |.+|...+......|+ +|+++++++++.+.+.+ .+... ++ |..+. ....+.+.+.. ..+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~-~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDT-ASHAAFLDSLP-ALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh-HHHHHHHHHHh-hcCC
Confidence 47899987 9999998888888899 89999998876544322 11111 22 22221 12333333332 2579
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+++.+.|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99988764
No 391
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.37 E-value=0.3 Score=43.51 Aligned_cols=79 Identities=27% Similarity=0.278 Sum_probs=48.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH---HHHhcCCce-E--ecCCCCCccHHHHHHHHh--CCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~---~~~~lG~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 265 (380)
.++++||+|+ |.+|.+.++.....|+ +|+.+.++++..+ .+.+.+... + .|..+.+ ...+.+.+.. -+.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPE-SAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence 4689999997 9999999988888899 8888877632122 222334321 2 2332221 1222232221 136
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 392
>PRK06484 short chain dehydrogenase; Validated
Probab=94.35 E-value=0.23 Score=49.33 Aligned_cols=79 Identities=27% Similarity=0.408 Sum_probs=53.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce---EecCCCCCccHHHHHHHHhC--CCcc
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~~~---vi~~~~~~~~~~~~~~~~~~--~~~d 267 (380)
+++++||+|+ +++|.+.++.....|+ +|+.++++.++.+.+ ++++... ..|..+.+ .+.+.+..... +++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEA-QIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence 5789999997 8999999998888999 899998888876544 4455432 23333322 23333333221 3799
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+++++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999874
No 393
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.33 E-value=0.48 Score=46.64 Aligned_cols=70 Identities=29% Similarity=0.300 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChh-----HHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEE
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-----RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~-----~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v 269 (380)
.+++|+|+|+|.+|+.++.+++..|+ +|++++..+. ..+.+++.|.......... ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----------ccCCCCEE
Confidence 46789999999999999999999999 8888875542 2345667787544332111 01257788
Q ss_pred EEcccCh
Q 016933 270 VECTGNI 276 (380)
Q Consensus 270 ~d~~g~~ 276 (380)
+-+.|.+
T Consensus 83 v~s~Gi~ 89 (480)
T PRK01438 83 VTSPGWR 89 (480)
T ss_pred EECCCcC
Confidence 8777753
No 394
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.33 E-value=0.42 Score=42.19 Aligned_cols=83 Identities=18% Similarity=0.257 Sum_probs=51.7
Q ss_pred CCCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce--E--ecCCCCC-ccHHHHHHHH
Q 016933 192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--F--VNTSEHD-RPIQEVIAEM 261 (380)
Q Consensus 192 ~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~--v--i~~~~~~-~~~~~~~~~~ 261 (380)
...+++++||+|+ |.+|...++.....|+ +|+.++++.++.+.+ ++.+... + .+....+ ..+.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3457889999997 9999998888777899 899998887654333 3333321 2 2332211 1233322222
Q ss_pred hC--CCccEEEEcccC
Q 016933 262 TN--GGVDRSVECTGN 275 (380)
Q Consensus 262 ~~--~~~d~v~d~~g~ 275 (380)
.. +.+|+++.+.|.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 368999998764
No 395
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=94.31 E-value=0.95 Score=41.04 Aligned_cols=109 Identities=13% Similarity=0.060 Sum_probs=73.3
Q ss_pred CCCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-C----ceEecCCCCC--ccHHHHHHHHhCC
Q 016933 193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-V----TDFVNTSEHD--RPIQEVIAEMTNG 264 (380)
Q Consensus 193 ~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG-~----~~vi~~~~~~--~~~~~~~~~~~~~ 264 (380)
..+++.|+|+|+ +++|...+.-+...|. +|++..-.++..+.++..- - +..+|..+++ .+..+.+++..+.
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 356678999998 9999988888888899 8888876666655554422 1 1134444432 2344455555555
Q ss_pred -CccEEEEcccCh--------------------------hhHHHHHHHhhcCCcEEEEEcCCCCC
Q 016933 265 -GVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPSKD 302 (380)
Q Consensus 265 -~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~~ 302 (380)
+.-.+++++|.. ......+..+++..||+|.++...+.
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 777788888731 34556777788777999999887653
No 396
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.30 E-value=0.34 Score=43.10 Aligned_cols=100 Identities=16% Similarity=0.150 Sum_probs=60.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc--CCceE-ecCCCCCccHHHHHHHHhCCCccEEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV 270 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l--G~~~v-i~~~~~~~~~~~~~~~~~~~~~d~v~ 270 (380)
++.+|||+|+ |.+|...+..+...|+ +|+++.++.++....... ++..+ .|..+.. +.+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~----~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGS----DKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCCH----HHHHHHhhcCCCEEE
Confidence 3578999997 9999999888877898 888888887765433221 23222 2333311 122222222689999
Q ss_pred EcccChh-------------hHHHHHHHhhcC-CcEEEEEcCC
Q 016933 271 ECTGNID-------------NMISAFECVHDG-WGVAVLVGVP 299 (380)
Q Consensus 271 d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 299 (380)
.+.|... ....+++.+... .++++.++..
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 8876421 123445544432 2578877654
No 397
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.28 E-value=0.68 Score=41.93 Aligned_cols=89 Identities=18% Similarity=0.227 Sum_probs=56.1
Q ss_pred eEEEEcCCHHHHHH-HHHHHHcCCcEEEEE-cCChhH--HHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 198 SVAVFGLGAVGLAA-AEGARIAGASRIIGV-DRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 198 ~vlI~G~g~~G~~a-i~la~~~g~~~vi~~-~~~~~~--~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
+|.|+|+|.+|... ..+.+.-+. ++.++ +.++++ +++.+++|...... + +...+. ...+|+||+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~--~----~e~ll~---~~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE--G----VDGLLA---NPDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC--C----HHHHhc---CCCCCEEEECC
Confidence 58899999999854 455554466 55544 444443 56777888754331 1 222221 13699999999
Q ss_pred cChhhHHHHHHHhhcCCcEEEEEcC
Q 016933 274 GNIDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
+...+...+..++.. |+.++...
T Consensus 73 p~~~H~e~a~~al~a--Gk~VIdek 95 (285)
T TIGR03215 73 SAKAHARHARLLAEL--GKIVIDLT 95 (285)
T ss_pred CcHHHHHHHHHHHHc--CCEEEECC
Confidence 997777777777776 45554433
No 398
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.25 E-value=0.19 Score=45.60 Aligned_cols=44 Identities=25% Similarity=0.271 Sum_probs=37.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~ 238 (380)
.++++||+|+|+.+.+++..+..+|+.++++++++.+|.+.+.+
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~ 169 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD 169 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Confidence 46889999999999999888888999899999999888766543
No 399
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.22 E-value=1.1 Score=34.53 Aligned_cols=89 Identities=24% Similarity=0.383 Sum_probs=60.4
Q ss_pred eEEEEcCCHHHHHHHHHHHHc--CCcEEE-EEcCChhHHHH-HHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 198 SVAVFGLGAVGLAAAEGARIA--GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~--g~~~vi-~~~~~~~~~~~-~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
+|+|+|.|..|...+.-.+.. +. +++ +.++++++.+. .+++|.. .+ .+ +.+.+.. ..+|+|+-++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~--~~----~~~ll~~---~~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY--TD----LEELLAD---EDVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE--SS----HHHHHHH---TTESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch--hH----HHHHHHh---hcCCEEEEec
Confidence 578999999998887666655 44 554 55667666665 4568876 33 22 4333332 2699999999
Q ss_pred cChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 274 GNIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
....+.+.+..++..+ .-+++..+
T Consensus 71 p~~~h~~~~~~~l~~g--~~v~~EKP 94 (120)
T PF01408_consen 71 PPSSHAEIAKKALEAG--KHVLVEKP 94 (120)
T ss_dssp SGGGHHHHHHHHHHTT--SEEEEESS
T ss_pred CCcchHHHHHHHHHcC--CEEEEEcC
Confidence 9878888888888884 45556443
No 400
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.22 E-value=0.32 Score=43.00 Aligned_cols=78 Identities=29% Similarity=0.389 Sum_probs=49.2
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-E--ecCCCCCccHHHHHHHHh--CCC
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 265 (380)
++++||+|+ |.+|...+......|+ +|++++++.++.+.+.+ .+... . .|..+. ..+.+.+.... -++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE-DEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhcCC
Confidence 357999997 9999998888878899 89999898876655433 23221 1 233221 12333232222 236
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
.|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988864
No 401
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.21 E-value=0.35 Score=48.58 Aligned_cols=75 Identities=17% Similarity=0.242 Sum_probs=56.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccCh
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 276 (380)
+.++|.|.|.+|+..++..+..|. ++++++.++++.+.+++.|...+.- +..+ .+.+++..-+.+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHhcCccccCEEEEEcCCh
Confidence 678999999999999999999998 8999999999999999988755442 2222 2234333333788888777663
No 402
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.20 E-value=0.42 Score=43.20 Aligned_cols=97 Identities=18% Similarity=0.126 Sum_probs=65.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-ceE-ec-CCCC--CccHHHHHHHHhCCCccEE-E
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDF-VN-TSEH--DRPIQEVIAEMTNGGVDRS-V 270 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~-~~v-i~-~~~~--~~~~~~~~~~~~~~~~d~v-~ 270 (380)
++|||+|+|. |-++-.++|.....++++++.+++=.++++++-. ... .+ ..-. -.+-.+-+++... ++|+| +
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 5999998754 5567788888888899999999999999988322 110 11 1000 0113444544433 79997 4
Q ss_pred EcccC---------hhhHHHHHHHhhcCCcEEEEE
Q 016933 271 ECTGN---------IDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 271 d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 296 (380)
|+... .+....+-++|+++ |.++.-
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 55433 46788999999997 988866
No 403
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.20 E-value=0.28 Score=45.12 Aligned_cols=94 Identities=15% Similarity=0.103 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHH-HhcCCc--eEecCCCCCccHHHHHHHHhCCCccEE
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEA-KKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~-~g~~~vi~~~~~~~~~~~~-~~lG~~--~vi~~~~~~~~~~~~~~~~~~~~~d~v 269 (380)
....+++|+|+|..|.+.+..+.. .+.++|.+.+++.++.+.+ .++... .+. ..+ +.+.+ .++|+|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~~----~~~av-----~~aDiV 192 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PLD----GEAIP-----EAVDLV 192 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-ECC----HHHHh-----hcCCEE
Confidence 355789999999999998888764 6777899999998876544 334321 111 111 33333 268999
Q ss_pred EEcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 270 VECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 270 ~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
+.|+.+.+.+-.. .++++ -+++.+|...
T Consensus 193 itaT~s~~Pl~~~--~~~~g-~hi~~iGs~~ 220 (304)
T PRK07340 193 VTATTSRTPVYPE--AARAG-RLVVAVGAFT 220 (304)
T ss_pred EEccCCCCceeCc--cCCCC-CEEEecCCCC
Confidence 9998876543333 37886 8888998764
No 404
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.17 E-value=0.14 Score=48.03 Aligned_cols=77 Identities=13% Similarity=0.008 Sum_probs=47.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCC--ce-EecCCCCCccHHHHHHHHhCC-CccE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGV--TD-FVNTSEHDRPIQEVIAEMTNG-GVDR 268 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~-~~~~lG~--~~-vi~~~~~~~~~~~~~~~~~~~-~~d~ 268 (380)
++++|||+|+ |.+|...+..+...|. +|++++++..... ..+.++. .. .+..+-.+ .+.+.++..+ ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD---AAKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC---HHHHHHHHhhcCCCE
Confidence 4688999997 9999999999888898 8888877665432 2122221 11 12111111 1123333333 6899
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
||++.+.
T Consensus 79 vih~A~~ 85 (349)
T TIGR02622 79 VFHLAAQ 85 (349)
T ss_pred EEECCcc
Confidence 9999873
No 405
>PLN02823 spermine synthase
Probab=94.16 E-value=0.48 Score=44.09 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-ce-Eec-----CCCCCccHHHHHHHHhCCCcc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TD-FVN-----TSEHDRPIQEVIAEMTNGGVD 267 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~-~~-vi~-----~~~~~~~~~~~~~~~~~~~~d 267 (380)
..++|||+|+|. |.++..+++..+..+|++++.+++-.+++++.-. .. .++ ....| -.+.+++ ..+.+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~D--a~~~L~~-~~~~yD 178 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIIND--ARAELEK-RDEKFD 178 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEECh--hHHHHhh-CCCCcc
Confidence 346899998763 5556677787777799999999999999987421 10 110 00011 3333432 344799
Q ss_pred EEE-Eccc-----------ChhhHH-HHHHHhhcCCcEEEEE
Q 016933 268 RSV-ECTG-----------NIDNMI-SAFECVHDGWGVAVLV 296 (380)
Q Consensus 268 ~v~-d~~g-----------~~~~~~-~~~~~l~~~~G~~v~~ 296 (380)
+|| |... +.+.+. .+.+.|+++ |.++.-
T Consensus 179 vIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 179 VIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EEEecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 975 4321 113455 788899997 988754
No 406
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.15 E-value=0.4 Score=43.60 Aligned_cols=94 Identities=19% Similarity=0.243 Sum_probs=63.8
Q ss_pred hcchhhhhhhhhhhhccCC-CCCCeEEEEc-CCHHHHHHHHHHHHcCCcEEEEEc-CChhHHHHHHhcCCceEecCCCCC
Q 016933 175 ILSCGVSTGLGATLNVAKP-ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKKFGVTDFVNTSEHD 251 (380)
Q Consensus 175 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vi~~~-~~~~~~~~~~~lG~~~vi~~~~~~ 251 (380)
.+||+....+.. ++...+ -.|++|+|+| .+.+|.-.+.++...|+ .|++.. ++..
T Consensus 137 ~~PcTp~ai~~l-l~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~-------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMML-LRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD-------------------- 194 (296)
T ss_pred CcCCCHHHHHHH-HHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC--------------------
Confidence 355543333333 343343 5789999999 59999999999988899 888873 3321
Q ss_pred ccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 252 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
+.+.+ ...|+|+-++|.+..+...+ ++++ ..++.+|...
T Consensus 195 --l~e~~-----~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 195 --LPAVC-----RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred --HHHHH-----hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 11111 14799999999977766554 7886 8888888753
No 407
>PRK12743 oxidoreductase; Provisional
Probab=94.10 E-value=0.37 Score=42.90 Aligned_cols=78 Identities=18% Similarity=0.147 Sum_probs=47.0
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHH----HHHhcCCce-E--ecCCCCC--ccHHHHHHHHhCC
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFE----EAKKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG 264 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~-~~~~~~~----~~~~lG~~~-v--i~~~~~~--~~~~~~~~~~~~~ 264 (380)
++++||+|+ |.+|...++.+...|+ +|+.+. ++.++.+ .++..|... . .|..+.. ..+.+.+.+.. +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 468999997 9999999999888999 776664 4444432 233345422 2 2333321 11222332222 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|+++.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 408
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.09 E-value=0.42 Score=43.49 Aligned_cols=94 Identities=22% Similarity=0.234 Sum_probs=64.4
Q ss_pred hcchhhhhhhhhhhhccCC-CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCc
Q 016933 175 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 252 (380)
Q Consensus 175 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~ 252 (380)
.+||+....+. |++..++ -.|++|.|+|. +.+|.-.+.++...|+ +|++..+... +
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------~- 195 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------D- 195 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC-------------------C-
Confidence 45654333333 3444444 46899999997 5999999999999999 8888854322 0
Q ss_pred cHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 253 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
..+.++ ..|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 196 -l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 196 -AKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred -HHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 222121 4799999999987766554 7886 788888764
No 409
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.04 E-value=0.39 Score=44.14 Aligned_cols=34 Identities=32% Similarity=0.330 Sum_probs=29.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
.++++||+|+ +++|.+.++.....|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4689999997 8999999988888999 88888776
No 410
>PRK07791 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.45 Score=43.28 Aligned_cols=36 Identities=33% Similarity=0.374 Sum_probs=29.1
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 230 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~ 230 (380)
-+++++||+|+ +++|.+.+......|+ +|+.++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 35789999987 9999998888878899 777776553
No 411
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=93.97 E-value=0.53 Score=41.83 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=50.0
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E--ecCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v--i~~~~~~~~~~~~~~~~~--~~ 264 (380)
.++++||+|+ +.+|...+......|+ +++.++++.++.+.+ ++.+.+. + .|..+.+ ...+.++... -+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4689999997 9999998888888899 788888877665433 2234322 2 2333221 1223233221 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 412
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=93.97 E-value=0.55 Score=42.37 Aligned_cols=99 Identities=19% Similarity=0.135 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--eE-----ecCCCCCccHHHHHHHHhCCCc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DF-----VNTSEHDRPIQEVIAEMTNGGV 266 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~--~v-----i~~~~~~~~~~~~~~~~~~~~~ 266 (380)
+..++||++|+|. |.++..+++.....++++++.+++-.+.+++.-.. .. ++....| ..+.+++. .+.+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D--~~~~l~~~-~~~y 146 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDD--GFKFLADT-ENTF 146 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECc--hHHHHHhC-CCCc
Confidence 3456999998765 44556666766566899999998877777763110 00 0001112 33333332 3479
Q ss_pred cEEEEccc----------ChhhHHHHHHHhhcCCcEEEEEc
Q 016933 267 DRSVECTG----------NIDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 267 d~v~d~~g----------~~~~~~~~~~~l~~~~G~~v~~g 297 (380)
|+|+--.. ..+.+..+.+.|+++ |.++...
T Consensus 147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 99864222 124567888999997 9988763
No 413
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=93.92 E-value=0.58 Score=40.01 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=53.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh-------------------hH----HHHHHhcCCceEecCCCCCc
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KR----FEEAKKFGVTDFVNTSEHDR 252 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~-------------------~~----~~~~~~lG~~~vi~~~~~~~ 252 (380)
..+|+|+|+|++|.-.+..+-..|.+++..++.+. .| .+.++++..+..+......
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~- 99 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDD- 99 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecC-
Confidence 46799999999999999999999998888886542 11 2234455554333222211
Q ss_pred cHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhc
Q 016933 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 288 (380)
Q Consensus 253 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 288 (380)
+.+...+.. .++|+|++|..........-+....
T Consensus 100 -~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~ 133 (197)
T cd01492 100 -ISEKPEEFF-SQFDVVVATELSRAELVKINELCRK 133 (197)
T ss_pred -ccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHH
Confidence 111111221 2689999998775543444444444
No 414
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=93.89 E-value=0.58 Score=42.68 Aligned_cols=43 Identities=21% Similarity=0.234 Sum_probs=36.8
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~ 241 (380)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 37788999999987777777898 89999999999988888776
No 415
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=93.87 E-value=0.74 Score=41.11 Aligned_cols=100 Identities=21% Similarity=0.203 Sum_probs=65.5
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eEecCCCCCccHHHHHHHHhCCCc
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV 266 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~-~vi~~~~~~~~~~~~~~~~~~~~~ 266 (380)
.....++++++||=+|+| .|..+..+++.....+|++++.++...+.+++.-.. .++.. + ..+ . ...+.+
T Consensus 24 l~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~-d----~~~-~--~~~~~f 94 (258)
T PRK01683 24 LARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA-D----IAS-W--QPPQAL 94 (258)
T ss_pred HhhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC-c----hhc-c--CCCCCc
Confidence 344566788899988875 366677888776434999999999988888764321 12211 1 110 0 112378
Q ss_pred cEEEEccc------ChhhHHHHHHHhhcCCcEEEEEc
Q 016933 267 DRSVECTG------NIDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 267 d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g 297 (380)
|+|+.... ....+..+.+.|+++ |.+++..
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 99876533 124678899999997 9988753
No 416
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=93.87 E-value=0.18 Score=45.75 Aligned_cols=74 Identities=24% Similarity=0.310 Sum_probs=50.5
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
..+++++|+|+|++|.+++..+...|+.+|++++++.++.+.+.+ ++....+.. ..+ .. .. -..+|+|+++
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~~----~~-~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--LQ----EE-LADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--ch----hc-cccCCEEEEC
Confidence 456789999999999999999999996699999999888765543 332110111 000 10 10 1368999999
Q ss_pred ccC
Q 016933 273 TGN 275 (380)
Q Consensus 273 ~g~ 275 (380)
+..
T Consensus 193 Tp~ 195 (278)
T PRK00258 193 TSA 195 (278)
T ss_pred CcC
Confidence 875
No 417
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=93.87 E-value=0.81 Score=35.87 Aligned_cols=92 Identities=24% Similarity=0.339 Sum_probs=51.9
Q ss_pred eEEEEcC-CHHHHHHHHHHHH-cCCcEEEEEcCChh---HHHHHHhcCCc--eEecCCCCCccHHHHHHHHhCCCccEEE
Q 016933 198 SVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSK---RFEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSV 270 (380)
Q Consensus 198 ~vlI~G~-g~~G~~ai~la~~-~g~~~vi~~~~~~~---~~~~~~~lG~~--~vi~~~~~~~~~~~~~~~~~~~~~d~v~ 270 (380)
+|+|+|+ |-+|.+.++.+.. -+.+-+-+++++.+ ..+.-.-.|.. .+..+ +.+.+.... +|+++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~--------~~l~~~~~~-~DVvI 72 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT--------DDLEELLEE-ADVVI 72 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB--------S-HHHHTTH--SEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc--------hhHHHhccc-CCEEE
Confidence 5889998 9999999999988 57734555555541 11111111111 11111 123333332 89999
Q ss_pred EcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 271 ECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 271 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
|++ .++.....++.+... |.-+.+|.+.
T Consensus 73 DfT-~p~~~~~~~~~~~~~-g~~~ViGTTG 100 (124)
T PF01113_consen 73 DFT-NPDAVYDNLEYALKH-GVPLVIGTTG 100 (124)
T ss_dssp EES--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred EcC-ChHHhHHHHHHHHhC-CCCEEEECCC
Confidence 999 446666666666664 7777787764
No 418
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=93.85 E-value=0.2 Score=39.40 Aligned_cols=78 Identities=24% Similarity=0.348 Sum_probs=48.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHHHh-cCCceEecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~-~~~~~~~~~~~~-lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
-+|-|+|+|.+|.......+..|. .|..+ .++.++.+.+.. ++...+.+..+ . -...|++|-++.
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~-~~~aDlv~iavp 77 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------I-LRDADLVFIAVP 77 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------G-GCC-SEEEE-S-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------c-cccCCEEEEEec
Confidence 478999999999998888899998 77776 455555555544 44433333222 1 125899999998
Q ss_pred ChhhHHHHHHHhhc
Q 016933 275 NIDNMISAFECVHD 288 (380)
Q Consensus 275 ~~~~~~~~~~~l~~ 288 (380)
. +.+....+.|..
T Consensus 78 D-daI~~va~~La~ 90 (127)
T PF10727_consen 78 D-DAIAEVAEQLAQ 90 (127)
T ss_dssp C-CHHHHHHHHHHC
T ss_pred h-HHHHHHHHHHHH
Confidence 8 677777777765
No 419
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=93.85 E-value=0.7 Score=39.63 Aligned_cols=34 Identities=35% Similarity=0.476 Sum_probs=30.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
..+|+|+|+|++|...++.+...|.++++.++.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3679999999999999998888999889998876
No 420
>PRK06523 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.3 Score=43.50 Aligned_cols=75 Identities=27% Similarity=0.294 Sum_probs=46.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-EecCCCCC--ccHHHHHHHHhCCCccEEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVDRSV 270 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~-vi~~~~~~--~~~~~~~~~~~~~~~d~v~ 270 (380)
+++++||+|+ |.+|...+......|+ +|+.+++++++.. .-.... ..|..+.+ ..+.+.+.+.. +++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLERL-GGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence 4689999997 9999998888888899 8988888765321 111111 12332221 11222222222 3689999
Q ss_pred Eccc
Q 016933 271 ECTG 274 (380)
Q Consensus 271 d~~g 274 (380)
++.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9987
No 421
>PRK12747 short chain dehydrogenase; Provisional
Probab=93.82 E-value=1.3 Score=39.21 Aligned_cols=104 Identities=15% Similarity=0.104 Sum_probs=60.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHH-HHH---hcCCce-E--ecCCCCC--ccHHHHHHHH--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFE-EAK---KFGVTD-F--VNTSEHD--RPIQEVIAEM-- 261 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~-~~~~~~~-~~~---~lG~~~-v--i~~~~~~--~~~~~~~~~~-- 261 (380)
.++++||+|+ |.+|.+.+......|+ +|+... ++.++.+ ... +.+... . .|..+.+ ..+.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4688999997 9999999998888999 776653 4444332 222 223221 1 2222211 1122233221
Q ss_pred --hC-CCccEEEEcccCh-------------------------hhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 262 --TN-GGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 262 --~~-~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
.+ +++|+++++.|.. ..+..++..+.+. |+++.++...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 12 2799999998731 0122355566675 8999887653
No 422
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=93.82 E-value=2 Score=31.66 Aligned_cols=84 Identities=20% Similarity=0.348 Sum_probs=52.2
Q ss_pred eEEEEcCCHHHHHHHHHHHHcC---CcEEE-EEcCChhHHHHH-HhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 198 SVAVFGLGAVGLAAAEGARIAG---ASRII-GVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g---~~~vi-~~~~~~~~~~~~-~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
+|.|+|+|.+|.+.+.-....| . +|+ +.++++++.+.+ ++++...... + ..+.++ ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~~--~----~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATAD--D----NEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEESE--E----HHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccccC--C----hHHhhc-----cCCEEEEE
Confidence 4778899999999888888888 6 777 448999887766 4566432220 1 333333 37999999
Q ss_pred ccChhhHHHHHHH---hhcCCcEEEE
Q 016933 273 TGNIDNMISAFEC---VHDGWGVAVL 295 (380)
Q Consensus 273 ~g~~~~~~~~~~~---l~~~~G~~v~ 295 (380)
+-. ..+...++. ..++ ..++.
T Consensus 69 v~p-~~~~~v~~~i~~~~~~-~~vis 92 (96)
T PF03807_consen 69 VKP-QQLPEVLSEIPHLLKG-KLVIS 92 (96)
T ss_dssp S-G-GGHHHHHHHHHHHHTT-SEEEE
T ss_pred ECH-HHHHHHHHHHhhccCC-CEEEE
Confidence 976 444444433 3443 44443
No 423
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=93.80 E-value=0.28 Score=41.90 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=58.8
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceEecCCCCCccHHHHHHHHhCC
Q 016933 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG 264 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l----G~~~vi~~~~~~~~~~~~~~~~~~~ 264 (380)
......++.+||-+|+| .|..++.+|+ .|. +|++++.++.-.+.+++. |... .....+ +.. . .. .+
T Consensus 24 ~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v--~~~~~d--~~~-~-~~-~~ 93 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPL--RTDAYD--INA-A-AL-NE 93 (195)
T ss_pred HHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCc--eeEecc--chh-c-cc-cC
Confidence 33344456788888875 3666777776 477 999999999877766542 3221 111111 100 0 11 23
Q ss_pred CccEEEEccc-----C---hhhHHHHHHHhhcCCcEEEEEc
Q 016933 265 GVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 265 ~~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~g 297 (380)
.+|+|+...- . ...+..+.+.|+++ |.++++.
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 6999876421 1 24677888899997 9865553
No 424
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.77 E-value=0.49 Score=41.53 Aligned_cols=79 Identities=29% Similarity=0.360 Sum_probs=46.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh-HHH----HHHhcCCce-Ee--cCCCCCccHHHHHHHHhC--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFE----EAKKFGVTD-FV--NTSEHDRPIQEVIAEMTN-- 263 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~-~~~----~~~~lG~~~-vi--~~~~~~~~~~~~~~~~~~-- 263 (380)
.++++||+|+ |.+|...+..+...|+ +|+++.++.. +.+ .++..+... ++ |..+.+ .+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE-SVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 3578999997 9999999988888899 6766655443 222 222233322 22 332221 12233333222
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+++|+++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999999874
No 425
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.76 E-value=1.5 Score=40.63 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=33.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 236 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~ 236 (380)
++|.|+|+|.+|...++.+...|. .|+..+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 579999999999988888888899 999999988765543
No 426
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.75 E-value=0.52 Score=42.14 Aligned_cols=79 Identities=22% Similarity=0.379 Sum_probs=49.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E--ecCCCCCccHHHHHHHHhC--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v--i~~~~~~~~~~~~~~~~~~--~ 264 (380)
.++++||+|+ +.+|...+......|+ +|+.+++++++.+.+ ++.|... . .|..+.. ...+.+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDED-GVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhCC
Confidence 4678999987 9999987777777899 788888887765433 2334322 2 2332221 12222222211 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|+++++.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 427
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.70 E-value=0.54 Score=42.43 Aligned_cols=93 Identities=19% Similarity=0.253 Sum_probs=63.3
Q ss_pred cchhhhhhhhhhhhccCC-CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCcc
Q 016933 176 LSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 253 (380)
Q Consensus 176 l~~~~~ta~~~l~~~~~~-~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~ 253 (380)
.||+....+.. ++..++ -.|++++|+|- ..+|.-.+++++..|+ +|++..+..+ +
T Consensus 139 ~PcTp~av~~l-l~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T~-------------------~-- 195 (285)
T PRK10792 139 RPCTPRGIMTL-LERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFTK-------------------N-- 195 (285)
T ss_pred CCCCHHHHHHH-HHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCCC-------------------C--
Confidence 45544444443 344443 35899999997 5699999999999999 8877743211 1
Q ss_pred HHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 254 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 254 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
+.+.++ .+|+++.++|.+..+.. +.++++ ..++.+|..
T Consensus 196 l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 196 LRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred HHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 222222 47999999999776554 778886 888888864
No 428
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.69 E-value=0.4 Score=43.18 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=29.9
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK 231 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~ 231 (380)
+++++||+|+ |.+|...+..+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4578999997 9999998888888899 8888887653
No 429
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.68 E-value=0.52 Score=47.91 Aligned_cols=93 Identities=12% Similarity=0.199 Sum_probs=65.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 275 (380)
.+.|+|.|.|.+|+..++..+..|. ++++++.++++.+.+++.|...++ -+..+. +.+++..-..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~~---~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATRM---DLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCCH---HHHHhcCCCcCCEEEEEeCC
Confidence 3679999999999999999999999 899999999999999998875433 233222 22333323378999999987
Q ss_pred hhhHH---HHHHHhhcCCcEEE
Q 016933 276 IDNMI---SAFECVHDGWGVAV 294 (380)
Q Consensus 276 ~~~~~---~~~~~l~~~~G~~v 294 (380)
++.-. ...+.+.|+ -+++
T Consensus 475 ~~~n~~i~~~ar~~~p~-~~ii 495 (621)
T PRK03562 475 PQTSLQLVELVKEHFPH-LQII 495 (621)
T ss_pred HHHHHHHHHHHHHhCCC-CeEE
Confidence 54332 334444554 4443
No 430
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=93.65 E-value=0.97 Score=40.33 Aligned_cols=97 Identities=23% Similarity=0.231 Sum_probs=66.5
Q ss_pred hhccCCCCCCeEEEEcCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCc
Q 016933 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV 266 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~ 266 (380)
.......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+.+.+. .+ ..+ + ...+.+
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~~~-~--~~~~~f 90 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--VRD-W--KPKPDT 90 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--hhh-C--CCCCCc
Confidence 4445567888998888764 66777888775 55 899999999999888886654322 11 111 1 112379
Q ss_pred cEEEEccc-----C-hhhHHHHHHHhhcCCcEEEEE
Q 016933 267 DRSVECTG-----N-IDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 267 d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 296 (380)
|+|+-... . ...+..+.+.|+|+ |.+++.
T Consensus 91 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 91 DVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred eEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 99987542 1 24577888999997 998765
No 431
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=93.59 E-value=0.52 Score=39.73 Aligned_cols=93 Identities=12% Similarity=0.141 Sum_probs=56.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHhCCCccEEEE
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d 271 (380)
+++||=+|+| .|..++.+++.....+|++++.+++..+.+++ .|.+.+ .....+ ..+ + ...+.+|+|+-
T Consensus 43 ~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~d--~~~-~--~~~~~fD~I~s 115 (181)
T TIGR00138 43 GKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNGR--AED-F--QHEEQFDVITS 115 (181)
T ss_pred CCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEecc--hhh-c--cccCCccEEEe
Confidence 7888888864 25556666665533489999999987666543 454332 111111 211 1 11247999875
Q ss_pred cc-c-ChhhHHHHHHHhhcCCcEEEEE
Q 016933 272 CT-G-NIDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 272 ~~-g-~~~~~~~~~~~l~~~~G~~v~~ 296 (380)
.. . -+..+..+.+.|+++ |+++..
T Consensus 116 ~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 116 RALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred hhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 43 1 124566778889997 998865
No 432
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.57 E-value=0.57 Score=39.17 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=28.5
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~ 230 (380)
+|+|+|+|++|...++.+-..|.++++.++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999988888889998888887664
No 433
>PRK14982 acyl-ACP reductase; Provisional
Probab=93.55 E-value=0.44 Score=44.26 Aligned_cols=94 Identities=21% Similarity=0.236 Sum_probs=60.2
Q ss_pred CCCCeEEEEcC-CHHHHHHHHHHH-HcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCCCccHHHHHHHHhCCCccEEE
Q 016933 194 ERGSSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 270 (380)
Q Consensus 194 ~~g~~vlI~G~-g~~G~~ai~la~-~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~ 270 (380)
-.+++|+|+|+ |.+|..++..+. ..|..+++.+.++.++.+.+.+ ++... .. .+.+... ..|+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~----------i~-~l~~~l~-~aDiVv 220 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK----------IL-SLEEALP-EADIVV 220 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc----------HH-hHHHHHc-cCCEEE
Confidence 35689999998 899988777775 4576689999998887766543 32111 11 1222222 589999
Q ss_pred EcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 271 ECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 271 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
.+++.+..+..-...+++. -.++.++.+.
T Consensus 221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvPR 249 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKP-CLMIDGGYPK 249 (340)
T ss_pred ECCcCCcCCcCCHHHhCCC-eEEEEecCCC
Confidence 9998755431222345664 6666777654
No 434
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.54 E-value=0.49 Score=42.44 Aligned_cols=76 Identities=21% Similarity=0.247 Sum_probs=47.3
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-Ee--cCCCCCccHHHHHHHHh--CCCcc
Q 016933 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NGGVD 267 (380)
Q Consensus 198 ~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi--~~~~~~~~~~~~~~~~~--~~~~d 267 (380)
++||+|+ |.+|...+......|+ +|+.++++.++.+.+ +..+.+. ++ |..+. ..+.+.+.... .+++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDY-SQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence 6899997 9999998888777899 888888887765432 2233322 22 22221 11222222221 13799
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
++|.+.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99999884
No 435
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.54 E-value=0.53 Score=45.07 Aligned_cols=74 Identities=22% Similarity=0.305 Sum_probs=47.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCc-eE--ecCCCCCccHHHHHHHHhCCCccEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRS 269 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~-~lG~~-~v--i~~~~~~~~~~~~~~~~~~~~~d~v 269 (380)
++++++|+|+ |++|.+.+......|+ +|+++++++++.+... +.+.. .. .|..+. +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-----~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-----AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-----HHHHHHh-CCCCEE
Confidence 4689999997 9999999888888899 8888888776653321 11111 12 232221 2233332 369999
Q ss_pred EEcccC
Q 016933 270 VECTGN 275 (380)
Q Consensus 270 ~d~~g~ 275 (380)
+.+.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988764
No 436
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=93.53 E-value=0.89 Score=41.44 Aligned_cols=93 Identities=17% Similarity=0.176 Sum_probs=54.6
Q ss_pred CeEEEEcCCHHHHH-HHHHHHHcCCcEEEE-EcCChh--HHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEc
Q 016933 197 SSVAVFGLGAVGLA-AAEGARIAGASRIIG-VDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (380)
Q Consensus 197 ~~vlI~G~g~~G~~-ai~la~~~g~~~vi~-~~~~~~--~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~ 272 (380)
-++.|+|.|.+|.. +..+.+.-+. ++.+ ++.+++ .++..+++|..... .+ +...+....-..+|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~--~~----ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA--EG----IDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc--CC----HHHHHhCcCCCCCCEEEEC
Confidence 46899999999986 4444444466 4444 445443 34667778864322 11 3222321000369999999
Q ss_pred ccChhhHHHHHHHhhcCCcEEEEEcC
Q 016933 273 TGNIDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
++...+...+.+++.. |+.++...
T Consensus 78 T~a~~H~e~a~~a~ea--Gk~VID~s 101 (302)
T PRK08300 78 TSAGAHVRHAAKLREA--GIRAIDLT 101 (302)
T ss_pred CCHHHHHHHHHHHHHc--CCeEEECC
Confidence 9986666666666665 45444433
No 437
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.51 E-value=0.58 Score=42.45 Aligned_cols=43 Identities=28% Similarity=0.461 Sum_probs=37.0
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~ 241 (380)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+++.|.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~ 44 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGL 44 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCC
Confidence 58899999999887777777788 89999999999888888775
No 438
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=93.50 E-value=0.93 Score=42.70 Aligned_cols=97 Identities=16% Similarity=0.312 Sum_probs=64.2
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHc--CCcEEEEEc--CChhH-HHHHHhcCCceEecCCCCC-ccHH--------------
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVD--RSSKR-FEEAKKFGVTDFVNTSEHD-RPIQ-------------- 255 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~--g~~~vi~~~--~~~~~-~~~~~~lG~~~vi~~~~~~-~~~~-------------- 255 (380)
++|.|+|+ |.+|..++...+.. .. +|+++. ++.++ .++++++++..+...++.. ..+.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 47899996 99999999988765 45 677664 33333 4556678888766544321 1111
Q ss_pred HHHHHHhCC-CccEEEEcccChhhHHHHHHHhhcCCcEEEE
Q 016933 256 EVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 295 (380)
Q Consensus 256 ~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 295 (380)
+.+.++... .+|+|+.++++...+...+.+++.+ .++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 122233333 6999999998867788889999885 55554
No 439
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.50 E-value=0.61 Score=44.09 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=30.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
..+|+|+|+|++|..++..+...|+++++.++.+
T Consensus 41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4689999999999999999999999899888765
No 440
>PRK13984 putative oxidoreductase; Provisional
Probab=93.49 E-value=0.43 Score=48.50 Aligned_cols=77 Identities=27% Similarity=0.294 Sum_probs=54.2
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh---------------------hHHHHHHhcCCceEecCCCC-
Q 016933 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEH- 250 (380)
Q Consensus 193 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~---------------------~~~~~~~~lG~~~vi~~~~~- 250 (380)
.++++.|+|+|+|..|+.++..++..|. +|+++++.+ ...++++++|++..++..-.
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4678899999999999999999999999 788775532 23566778888665543321
Q ss_pred CccHHHHHHHHhCCCccEEEEcccC
Q 016933 251 DRPIQEVIAEMTNGGVDRSVECTGN 275 (380)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~v~d~~g~ 275 (380)
+... +.+. ..+|.+|-++|.
T Consensus 359 ~~~~-~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPL-EELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCH-HHHH----hcCCEEEEEcCc
Confidence 1111 2221 269999999985
No 441
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.48 E-value=1.5 Score=37.04 Aligned_cols=100 Identities=17% Similarity=0.182 Sum_probs=62.3
Q ss_pred hccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHhCC
Q 016933 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 264 (380)
Q Consensus 189 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~~~ 264 (380)
....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ .+...+- ....+ ... ...+
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~-~~~~d--~~~----~~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNID-IIPGE--API----ELPG 96 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeE-EEecC--chh----hcCc
Confidence 344567888888888753 6667777776533389999999988777754 3432221 11111 101 1123
Q ss_pred CccEEEEcccC---hhhHHHHHHHhhcCCcEEEEEc
Q 016933 265 GVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 265 ~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g 297 (380)
.+|+|+..... ...+..+.+.|+++ |++++..
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 69999864321 23567888999997 9987643
No 442
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.48 E-value=0.54 Score=41.49 Aligned_cols=80 Identities=28% Similarity=0.284 Sum_probs=47.3
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEE-EcCChhHHHH----HHhcCCce-EecCCCCC-ccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEE----AKKFGVTD-FVNTSEHD-RPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~-~~~~~~~~~~----~~~lG~~~-vi~~~~~~-~~~~~~~~~~~--~~ 264 (380)
+++++||+|+ |.+|...+......|+ +|+. ..++.++.+. +++.+... .+..+-.+ ....+.+.+.. -+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999997 9999998888888899 6654 4566655432 23344432 22222222 11222232222 13
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 443
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.48 E-value=0.44 Score=41.73 Aligned_cols=71 Identities=21% Similarity=0.285 Sum_probs=50.3
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccC
Q 016933 199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (380)
Q Consensus 199 vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~--~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 275 (380)
|+|+|+ |.+|...+..+...+. +|.++.|+.. +.+.+++.|+..+ ..+-.+ .+.+.+... ++|.||.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~---~~~l~~al~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADYDD---PESLVAALK-GVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-TT----HHHHHHHHT-TCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecccCC---HHHHHHHHc-CCceEEeecCc
Confidence 789998 9999999999988888 8888878753 4566778898654 332222 233444433 69999999883
No 444
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.47 E-value=0.39 Score=47.77 Aligned_cols=71 Identities=24% Similarity=0.295 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~-~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
.++++||+|+|++|.+++..+...|+ +|++++++.++.+.+. .++.. ++...+ ..+......|++++++
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~~--------~~~~~~~~~diiINtT 447 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLAD--------LENFHPEEGMILANTT 447 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHhH--------hhhhccccCeEEEecc
Confidence 46789999999999999999999999 8999999887766554 34432 222111 1111122478888887
Q ss_pred cC
Q 016933 274 GN 275 (380)
Q Consensus 274 g~ 275 (380)
+.
T Consensus 448 ~v 449 (529)
T PLN02520 448 SV 449 (529)
T ss_pred cC
Confidence 53
No 445
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=93.45 E-value=0.67 Score=39.00 Aligned_cols=40 Identities=38% Similarity=0.438 Sum_probs=31.9
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~ 238 (380)
+|.|+|+|.+|...++++...|+ +|+.++.+++.++..++
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~~ 40 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERARK 40 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhhh
Confidence 58899999999988888888899 99999999987665543
No 446
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.45 E-value=0.54 Score=41.56 Aligned_cols=77 Identities=21% Similarity=0.233 Sum_probs=45.4
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHHH-HhcCCce-Ee--cCCCCCccHHHHHH---HHhCCCc
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA-KKFGVTD-FV--NTSEHDRPIQEVIA---EMTNGGV 266 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~-~~~~~~~~~-~~lG~~~-vi--~~~~~~~~~~~~~~---~~~~~~~ 266 (380)
++++||+|+ |.+|...+......|+ +|+.+. +++++.+.+ .+++... ++ |..+.+ .+.+.+. +..++++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTDRE-QVQAMFATATEHFGKPI 82 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHH-HHHHHHHHHHHHhCCCC
Confidence 578999997 9999998888888899 666553 444444333 3344221 22 332221 1333332 2333249
Q ss_pred cEEEEccc
Q 016933 267 DRSVECTG 274 (380)
Q Consensus 267 d~v~d~~g 274 (380)
|++|.+.|
T Consensus 83 d~li~~ag 90 (253)
T PRK08642 83 TTVVNNAL 90 (253)
T ss_pred eEEEECCC
Confidence 99999876
No 447
>PRK06940 short chain dehydrogenase; Provisional
Probab=93.44 E-value=0.67 Score=41.85 Aligned_cols=77 Identities=26% Similarity=0.383 Sum_probs=47.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-E--ecCCCCCccHHHHHHHHh-CCCcc
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT-NGGVD 267 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-v--i~~~~~~~~~~~~~~~~~-~~~~d 267 (380)
+++++|+|+|.+|...+.... .|+ +|+.+++++++.+.+ ++.|.+. + .|..+.+ .+.+.+.... -+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCC
Confidence 357888999999998887774 788 899888887665433 2234322 2 2333322 2333333221 24799
Q ss_pred EEEEcccC
Q 016933 268 RSVECTGN 275 (380)
Q Consensus 268 ~v~d~~g~ 275 (380)
+++++.|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999884
No 448
>PRK09135 pteridine reductase; Provisional
Probab=93.43 E-value=0.63 Score=40.92 Aligned_cols=79 Identities=16% Similarity=0.173 Sum_probs=46.7
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCC-hhHHHHHH----hcCC--ceE--ecCCCCCccHHHHHHHHh--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEEAK----KFGV--TDF--VNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~-~~~~~~~~----~lG~--~~v--i~~~~~~~~~~~~~~~~~-- 262 (380)
.++++||+|+ |.+|...+......|+ +|+.++++ +++.+.+. +.+. ... .|..+.+ .+.+.++...
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPD-ALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHH-HHHHHHHHHHHH
Confidence 4578999997 9999988888877899 88888775 33333222 2211 111 2332221 1222232221
Q ss_pred CCCccEEEEcccC
Q 016933 263 NGGVDRSVECTGN 275 (380)
Q Consensus 263 ~~~~d~v~d~~g~ 275 (380)
-+++|++|.+.|.
T Consensus 83 ~~~~d~vi~~ag~ 95 (249)
T PRK09135 83 FGRLDALVNNASS 95 (249)
T ss_pred cCCCCEEEECCCC
Confidence 1368999999883
No 449
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=93.42 E-value=0.93 Score=40.98 Aligned_cols=88 Identities=19% Similarity=0.228 Sum_probs=59.1
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccCh
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~-~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 276 (380)
+|.++|-|.+|.-.++=+...|. .+.+.++++++ .+++++.|+...-+ ..+.++ ..|+||-++...
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s-------~~eaa~-----~aDvVitmv~~~ 68 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS-------PAEAAA-----EADVVITMLPDD 68 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC-------HHHHHH-----hCCEEEEecCCH
Confidence 57788999999988888888899 99999999999 89998888854321 111111 367777777665
Q ss_pred hhHHHHH-------HHhhcCCcEEEEEcCC
Q 016933 277 DNMISAF-------ECVHDGWGVAVLVGVP 299 (380)
Q Consensus 277 ~~~~~~~-------~~l~~~~G~~v~~g~~ 299 (380)
+.+...+ +.++++ ..++.+...
T Consensus 69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTi 97 (286)
T COG2084 69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTI 97 (286)
T ss_pred HHHHHHHhCccchhhcCCCC-CEEEECCCC
Confidence 5444333 223343 555555443
No 450
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.42 E-value=1 Score=41.87 Aligned_cols=90 Identities=20% Similarity=0.105 Sum_probs=61.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-----------EecCCCCCccHHHHHHHHhCCC
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-----------FVNTSEHDRPIQEVIAEMTNGG 265 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~-----------vi~~~~~~~~~~~~~~~~~~~~ 265 (380)
.+|.|+|+|.+|.+.+..+...|. .|.++++++++.+.+++.+... +....+ ..+.+ ..
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~----~~e~~-----~~ 74 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD----PEEAL-----AG 74 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC----HHHHH-----cC
Confidence 469999999999998888888898 8999999988877776643110 100111 22211 25
Q ss_pred ccEEEEcccChhhHHHHHHHhhcCCcEEEEEcC
Q 016933 266 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 266 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
.|+|+-++... .+...++.++++ -.++.+..
T Consensus 75 aD~Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 75 ADFAVVAVPSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred CCEEEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence 89999999884 567777888885 55555543
No 451
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=93.42 E-value=0.55 Score=42.95 Aligned_cols=43 Identities=26% Similarity=0.385 Sum_probs=36.2
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~ 241 (380)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 68899999999877777777888 89999999998888777765
No 452
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.41 E-value=0.9 Score=42.27 Aligned_cols=86 Identities=22% Similarity=0.225 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEccc
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 274 (380)
.|.+|.|+|.|.+|...+..++.+|. +|++.+++.+..... .. +.. + +.+.+ ...|+|+-++.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~~-~--l~ell-----~~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YKD-S--VKEAI-----KDADIISLHVP 207 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----ccC-C--HHHHH-----hcCCEEEEeCC
Confidence 57789999999999999999999999 999998876543211 00 100 1 22222 14688877776
Q ss_pred Chh-----hHHHHHHHhhcCCcEEEEEcC
Q 016933 275 NID-----NMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 275 ~~~-----~~~~~~~~l~~~~G~~v~~g~ 298 (380)
... .....+..++++ ..++.++-
T Consensus 208 ~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 208 ANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 432 123455667775 66666643
No 453
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.41 E-value=0.81 Score=41.30 Aligned_cols=95 Identities=20% Similarity=0.163 Sum_probs=62.9
Q ss_pred hcchhhhhhhhhhhhccCC-CCCCeEEEEcCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCc
Q 016933 175 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 252 (380)
Q Consensus 175 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G~g-~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~ 252 (380)
.+||+....+. |++..++ -.|++|+|+|.| .+|.-.+.++...|+ +|++..+..+.
T Consensus 136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t~~-------------------- 193 (285)
T PRK14191 136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILTKD-------------------- 193 (285)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCcHH--------------------
Confidence 34554444443 3444444 369999999985 999999999999999 77766322111
Q ss_pred cHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 253 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
+.+.++ .+|+++-++|.+..+. -+.++++ ..++.+|...
T Consensus 194 -l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~~ 232 (285)
T PRK14191 194 -LSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGINR 232 (285)
T ss_pred -HHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeeccc
Confidence 111121 4799999999977654 3456886 8888888643
No 454
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.40 E-value=0.6 Score=41.65 Aligned_cols=78 Identities=17% Similarity=0.359 Sum_probs=46.3
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCcEEEEEcCCh---hHHHHH-Hhc-CCce-E--ecCCCCCccHHHHHHHHhC
Q 016933 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKF-GVTD-F--VNTSEHDRPIQEVIAEMTN 263 (380)
Q Consensus 195 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vi~~~~~~---~~~~~~-~~l-G~~~-v--i~~~~~~~~~~~~~~~~~~ 263 (380)
.++++||+|+ +++|.+.+......|+ +|+.+.++. ++.+.+ +++ +... . .|..+.+ ...+.+++...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDE-EITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHH-HHHHHHHHHHH
Confidence 4689999986 5999998888878899 788776543 333333 333 2211 1 2333322 22233333222
Q ss_pred --CCccEEEEccc
Q 016933 264 --GGVDRSVECTG 274 (380)
Q Consensus 264 --~~~d~v~d~~g 274 (380)
+.+|+++++.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999999876
No 455
>PLN03013 cysteine synthase
Probab=93.40 E-value=1.8 Score=41.53 Aligned_cols=58 Identities=26% Similarity=0.151 Sum_probs=43.7
Q ss_pred hhccCCCCCCeEEEE-cCCHHHHHHHHHHHHcCCcEEEEE--cCChhHHHHHHhcCCceEe
Q 016933 188 LNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFV 245 (380)
Q Consensus 188 ~~~~~~~~g~~vlI~-G~g~~G~~ai~la~~~g~~~vi~~--~~~~~~~~~~~~lG~~~vi 245 (380)
.+...+++|.+.+|. .+|..|.+.+..|+.+|++-++++ ..+++|.+.++.+|++.++
T Consensus 166 ~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 345667888665565 469999999999999999544444 2467899999999997654
No 456
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.40 E-value=0.95 Score=40.75 Aligned_cols=80 Identities=20% Similarity=0.218 Sum_probs=48.6
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-EecCCCCC-ccHHHHHHHHh--CCC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 265 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi~~~~~~-~~~~~~~~~~~--~~~ 265 (380)
+.+++||+|+ |.+|...+..+...|+ +|+++.++.++.+.+ +..+... ++..+-.+ ..+.+.+.+.. -++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3468999997 9999998888878899 888887776654332 2234322 22222222 11223333221 136
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999999875
No 457
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.39 E-value=0.95 Score=40.38 Aligned_cols=96 Identities=25% Similarity=0.263 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceEecCCCCCccHHHHHHHHhCCCccEE
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l----G~~~vi~~~~~~~~~~~~~~~~~~~~~d~v 269 (380)
.++.+||=+|+| .|..+..+++. |. +|++++.+++..+.+++. |...-+.....+ ..+ +.....+.+|+|
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d--~~~-l~~~~~~~fD~V 116 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA--AQD-IAQHLETPVDLI 116 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC--HHH-HhhhcCCCCCEE
Confidence 456788878875 36778888875 77 899999999988887763 321101111111 211 222233479999
Q ss_pred EEccc-----C-hhhHHHHHHHhhcCCcEEEEE
Q 016933 270 VECTG-----N-IDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 270 ~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 296 (380)
+.... . ...+..+.+.|+|+ |.++++
T Consensus 117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 85421 2 24578899999997 998765
No 458
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.37 E-value=0.57 Score=44.10 Aligned_cols=35 Identities=31% Similarity=0.356 Sum_probs=30.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~ 230 (380)
..+|||+|+|++|..+++.+-..|.++++.++.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 47899999999999999999999999998887643
No 459
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.35 E-value=0.42 Score=43.81 Aligned_cols=92 Identities=16% Similarity=0.207 Sum_probs=56.4
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCc---cHHHHHHHHhCCCccEEEEccc
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR---PIQEVIAEMTNGGVDRSVECTG 274 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~---~~~~~~~~~~~~~~d~v~d~~g 274 (380)
+|+|+|+|.+|.+.+..+...|. .|+.++++.++.+.+++.|... + +.... ......... +.+|+||-++-
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence 58999999999988887777888 8999988888888777766521 1 00000 000011111 46899999987
Q ss_pred ChhhHHHHHHHhh----cCCcEEEEEc
Q 016933 275 NIDNMISAFECVH----DGWGVAVLVG 297 (380)
Q Consensus 275 ~~~~~~~~~~~l~----~~~G~~v~~g 297 (380)
.. .+..+++.+. ++ ..++.+.
T Consensus 76 ~~-~~~~~~~~l~~~l~~~-~~iv~~~ 100 (304)
T PRK06522 76 AY-QLPAALPSLAPLLGPD-TPVLFLQ 100 (304)
T ss_pred cc-cHHHHHHHHhhhcCCC-CEEEEec
Confidence 63 3344444444 33 4555443
No 460
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.34 E-value=0.72 Score=40.58 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=46.4
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEE-cCCh-hHHHHH---HhcCCceE---ecCCCCCccHHHHHHHHh--C
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSS-KRFEEA---KKFGVTDF---VNTSEHDRPIQEVIAEMT--N 263 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~-~~~~-~~~~~~---~~lG~~~v---i~~~~~~~~~~~~~~~~~--~ 263 (380)
+++++||+|+ |.+|...+..+...|+ +|+.+ .++. .+.+++ ++.+.... .|..+.+ .+.+.+.+.. -
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWD-STKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHh
Confidence 3578999987 9999999988888899 66664 3333 232333 33454332 2222211 1222222221 1
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 379999999885
No 461
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.34 E-value=0.63 Score=47.14 Aligned_cols=93 Identities=12% Similarity=0.138 Sum_probs=66.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccCh
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 276 (380)
+.|+|.|.|.+|+..++..+..|. ++++++.++++.+.+++.|...++ -+..+ .+.+++..-..+|.++-+++++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDATQ---LELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeCCC---HHHHHhcCCccCCEEEEEeCCH
Confidence 578999999999999999999999 899999999999999999875443 22222 2234443333789999999885
Q ss_pred hhHH---HHHHHhhcCCcEEEE
Q 016933 277 DNMI---SAFECVHDGWGVAVL 295 (380)
Q Consensus 277 ~~~~---~~~~~l~~~~G~~v~ 295 (380)
+.-. ...+...|+ .+++.
T Consensus 476 ~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 4332 334445564 55543
No 462
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.33 E-value=0.53 Score=43.48 Aligned_cols=38 Identities=18% Similarity=0.123 Sum_probs=30.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHH
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF 233 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~ 233 (380)
.|++|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~ 42 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR 42 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence 4689999997 9999998888888899 788776766543
No 463
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.30 E-value=0.33 Score=43.44 Aligned_cols=76 Identities=21% Similarity=0.268 Sum_probs=47.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-EecCCCCCccHHHHHHHHh--CCCccEEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV 270 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~-vi~~~~~~~~~~~~~~~~~--~~~~d~v~ 270 (380)
.++++||+|+ |.+|.+.+..+...|+ +|+.+++++++.+. ..... ..|..+.. .+.+.+.... -+.+|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSAE-EVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 4678999987 9999999888888899 88888777654321 11111 12333221 2333333322 13789999
Q ss_pred EcccC
Q 016933 271 ECTGN 275 (380)
Q Consensus 271 d~~g~ 275 (380)
++.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98874
No 464
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=93.18 E-value=0.71 Score=41.83 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=44.1
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCceE---ecCCCCCccHHHHHHHHhCC-CccE
Q 016933 199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF---VNTSEHDRPIQEVIAEMTNG-GVDR 268 (380)
Q Consensus 199 vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-l----G~~~v---i~~~~~~~~~~~~~~~~~~~-~~d~ 268 (380)
|||+|+ |.+|...+......+..+++.+++++.++..++. + ....+ +.+--.|-.-.+.+...... ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 799987 9999988877777787799999999988766644 4 11111 00111110123455555555 8999
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
||.++.-
T Consensus 81 VfHaAA~ 87 (293)
T PF02719_consen 81 VFHAAAL 87 (293)
T ss_dssp EEE----
T ss_pred EEEChhc
Confidence 9998753
No 465
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.18 E-value=0.62 Score=41.23 Aligned_cols=77 Identities=22% Similarity=0.264 Sum_probs=47.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-Ee--cCCCCCccHHHHHHHHhC--CCc
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GGV 266 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~----~~lG~~~-vi--~~~~~~~~~~~~~~~~~~--~~~ 266 (380)
+++||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ ++.+... .+ |..+.+ .+.+.+..... +.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKD-QVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCCC
Confidence 36899997 9999998888888899 888888877654332 2334322 22 322221 12233333221 368
Q ss_pred cEEEEcccC
Q 016933 267 DRSVECTGN 275 (380)
Q Consensus 267 d~v~d~~g~ 275 (380)
|+++++.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999999874
No 466
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.17 E-value=0.67 Score=41.45 Aligned_cols=79 Identities=20% Similarity=0.349 Sum_probs=46.6
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCcEEEEEcCC---hhHHHHH-HhcCCceE--ecCCCCCccHHHHHHHHhC--
Q 016933 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRS---SKRFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 263 (380)
Q Consensus 195 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vi~~~~~---~~~~~~~-~~lG~~~v--i~~~~~~~~~~~~~~~~~~-- 263 (380)
+++++||+|+ +++|.+.+......|+ +|+.+.+. +++.+.+ ++++.... .|..+.+ ...+.+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDE-QIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHH-HHHHHHHHHHHHh
Confidence 4689999984 5899998887777899 77776443 3333332 33453222 2333322 13333333221
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+.+|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998864
No 467
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=93.15 E-value=0.59 Score=40.70 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=47.2
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceE-ecCCCCCccHHHHHHHHhCCCccEEEEcccC
Q 016933 199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (380)
Q Consensus 199 vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~v-i~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 275 (380)
|||+|+ |-+|...+..+...|. .|+++.++......... .....+ .|..+. ..+.+.+... .+|.||++++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~-~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLTDK-EQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETTSH-HHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeecccc-cccccccccc---CceEEEEeecc
Confidence 789997 9999999999999999 78877777765554433 233222 233321 1122323222 68999999886
No 468
>PLN02244 tocopherol O-methyltransferase
Probab=93.14 E-value=0.5 Score=44.21 Aligned_cols=98 Identities=20% Similarity=0.221 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceEecCCCCCccHHHHHHHHhCCCccEE
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~l----G~~~vi~~~~~~~~~~~~~~~~~~~~~d~v 269 (380)
+++++||=+|+|. |..+..+++..|+ +|++++.++...+.+++. |...-+.....+ ..+ + .+..+.||+|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~-~-~~~~~~FD~V 190 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALN-Q-PFEDGQFDLV 190 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--ccc-C-CCCCCCccEE
Confidence 6788898888753 6677788887788 999999999877766552 331101111111 000 0 0122478999
Q ss_pred EEcccC------hhhHHHHHHHhhcCCcEEEEEcC
Q 016933 270 VECTGN------IDNMISAFECVHDGWGVAVLVGV 298 (380)
Q Consensus 270 ~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~ 298 (380)
+..... ...+..+.+.|+++ |++++...
T Consensus 191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 864321 24677899999997 99988654
No 469
>PLN02256 arogenate dehydrogenase
Probab=93.14 E-value=0.73 Score=42.32 Aligned_cols=45 Identities=24% Similarity=0.379 Sum_probs=35.6
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~ 241 (380)
.+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|+
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv 79 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGV 79 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCC
Confidence 45689999999999988888888887 8888988764 355666776
No 470
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=93.12 E-value=0.97 Score=40.59 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=67.4
Q ss_pred hhhccCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eEecCCCCCccHHHHHHHHhCCC
Q 016933 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGG 265 (380)
Q Consensus 187 l~~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~-~vi~~~~~~~~~~~~~~~~~~~~ 265 (380)
+....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.... .-+.....+ +.+ .....+.
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~ 117 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT 117 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence 34556788999999888753 5556777777788 999999999888888764221 111111111 100 0011236
Q ss_pred ccEEEEc--c---c---ChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 266 VDRSVEC--T---G---NIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 266 ~d~v~d~--~---g---~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
||+|+.. . + ....+..+.+.|+|+ |++++....
T Consensus 118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~ 158 (263)
T PTZ00098 118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC 158 (263)
T ss_pred eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 8998852 1 1 124677889999997 999887653
No 471
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.06 E-value=0.55 Score=41.93 Aligned_cols=102 Identities=21% Similarity=0.199 Sum_probs=59.0
Q ss_pred CCCeEEEEcC---CHHHHHHHHHHHHcCCcEEEEEcCC------hhHHHHHHhcCCc-eE--ecCCCCC--ccHHHHHHH
Q 016933 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRS------SKRFEEAKKFGVT-DF--VNTSEHD--RPIQEVIAE 260 (380)
Q Consensus 195 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vi~~~~~------~~~~~~~~~lG~~-~v--i~~~~~~--~~~~~~~~~ 260 (380)
.+++++|+|+ +++|.+.+......|+ +|+.+.++ ++..+.+++.+.. .. .|..+.+ ..+.+.+.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4688999996 4899998888888899 77666433 2223333332221 12 2333322 112233333
Q ss_pred HhCCCccEEEEcccCh-------h----------------------hHHHHHHHhhcCCcEEEEEcCC
Q 016933 261 MTNGGVDRSVECTGNI-------D----------------------NMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 261 ~~~~~~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
.. +.+|+++++.|.. . ....++..+.++ |+++.++..
T Consensus 84 ~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 84 KW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred Hc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 22 3799999998731 0 123456667775 888887654
No 472
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=93.05 E-value=1.5 Score=42.29 Aligned_cols=73 Identities=23% Similarity=0.353 Sum_probs=49.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHH---------h-CCCc
Q 016933 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM---------T-NGGV 266 (380)
Q Consensus 197 ~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~---------~-~~~~ 266 (380)
.+|.|+|.|.+|...+..+...|. +|+++++++++.+.++. |... ..+.. +.+.+++. + ....
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~---~~e~~--l~~~l~~~~~~g~l~~~~~~~~a 76 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIH---IVEPD--LDMVVKTAVEGGYLRATTTPEPA 76 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCC---cCCCC--HHHHHHHHhhcCceeeecccccC
Confidence 468999999999988887777898 99999999999987653 3211 11222 33332211 0 1157
Q ss_pred cEEEEcccCh
Q 016933 267 DRSVECTGNI 276 (380)
Q Consensus 267 d~v~d~~g~~ 276 (380)
|++|-|++.+
T Consensus 77 Dvvii~vptp 86 (415)
T PRK11064 77 DAFLIAVPTP 86 (415)
T ss_pred CEEEEEcCCC
Confidence 9999998875
No 473
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.05 E-value=0.84 Score=41.94 Aligned_cols=78 Identities=26% Similarity=0.318 Sum_probs=46.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHH----HHHHhcCCceE-e--cCCCCC--ccHHHHHHHHhC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRF----EEAKKFGVTDF-V--NTSEHD--RPIQEVIAEMTN 263 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~-~~~----~~~~~lG~~~v-i--~~~~~~--~~~~~~~~~~~~ 263 (380)
.++++||+|+ +.+|...+......|+ +|+..+++. ++. +.+++.|.... + |..+.+ ..+.+.+.+ -
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~ 87 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L 87 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence 4688999997 9999998887777899 788776542 222 22333454322 2 222211 112222222 2
Q ss_pred CCccEEEEcccC
Q 016933 264 GGVDRSVECTGN 275 (380)
Q Consensus 264 ~~~d~v~d~~g~ 275 (380)
+.+|++|++.|.
T Consensus 88 g~iD~li~nAG~ 99 (306)
T PRK07792 88 GGLDIVVNNAGI 99 (306)
T ss_pred CCCCEEEECCCC
Confidence 479999999874
No 474
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.04 E-value=0.84 Score=40.06 Aligned_cols=78 Identities=24% Similarity=0.354 Sum_probs=47.2
Q ss_pred CCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHHHh----cCCce-Ee--cCCCCCccHHHHHHHHhC--C
Q 016933 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--G 264 (380)
Q Consensus 196 g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~-~~~~~~~~~~~~----lG~~~-vi--~~~~~~~~~~~~~~~~~~--~ 264 (380)
++++||+|+ |.+|...+......|+ +|+.+ +++.++.+.+.+ .+... ++ |..+.+ .+.+.+..... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEE-DVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhC
Confidence 468999997 9999988877777799 77777 787766543322 23221 22 222221 12222222211 3
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 475
>PRK06436 glycerate dehydrogenase; Provisional
Probab=93.01 E-value=0.6 Score=42.82 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~ 230 (380)
.|++|.|+|-|.+|...+++++.+|+ +|++.+++.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~ 155 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSY 155 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 58999999999999999999999999 999998763
No 476
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=92.99 E-value=0.83 Score=39.75 Aligned_cols=101 Identities=19% Similarity=0.109 Sum_probs=60.4
Q ss_pred CCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceEec-------CCCCC-ccHHHHHHHH-
Q 016933 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHD-RPIQEVIAEM- 261 (380)
Q Consensus 192 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~-~~lG~~~vi~-------~~~~~-~~~~~~~~~~- 261 (380)
.+.++.+||+.|+| .|.-++.||. .|+ .|++++.++...+.+ ++.|...... +...+ .-+...+.++
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 34567899999876 3777778875 699 999999999988765 3333221000 00000 0000001111
Q ss_pred --hCCCccEEEEccc--------ChhhHHHHHHHhhcCCcEEEEE
Q 016933 262 --TNGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 262 --~~~~~d~v~d~~g--------~~~~~~~~~~~l~~~~G~~v~~ 296 (380)
..+.+|.|+|... ....+..+.++|+|+ |++.++
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1136899999653 124578899999997 875543
No 477
>PRK06849 hypothetical protein; Provisional
Probab=92.96 E-value=1.1 Score=42.89 Aligned_cols=93 Identities=14% Similarity=0.098 Sum_probs=57.8
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceE--ec-CCCCCccHHHHHHHHhCC-CccEE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VN-TSEHDRPIQEVIAEMTNG-GVDRS 269 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~v--i~-~~~~~~~~~~~~~~~~~~-~~d~v 269 (380)
...+|||+|+ ...|+..+..++..|. +|+++++.+....... ..++.. +. +...+..+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s-~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFS-RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHH-HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3578999998 5689988888888999 8999988765433211 122332 21 222233466777665555 89999
Q ss_pred EEcccChhhHHHHHHHhhcC
Q 016933 270 VECTGNIDNMISAFECVHDG 289 (380)
Q Consensus 270 ~d~~g~~~~~~~~~~~l~~~ 289 (380)
+-+......+....+.+.+.
T Consensus 81 IP~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred EECChHHHhHHhhhhhhcCC
Confidence 98875422233334445553
No 478
>PRK06141 ornithine cyclodeaminase; Validated
Probab=92.95 E-value=1.4 Score=40.69 Aligned_cols=93 Identities=16% Similarity=0.125 Sum_probs=59.7
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHH-HcCCcEEEEEcCChhHHHHHHh-c---CCceEecCCCCCccHHHHHHHHhCCCccE
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKK-F---GVTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~-~~g~~~vi~~~~~~~~~~~~~~-l---G~~~vi~~~~~~~~~~~~~~~~~~~~~d~ 268 (380)
....+++|+|+|..|.+.+.... ..+..+|.+.++++++.+.+.+ + |.. +....+ ..+.+ .+.|+
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~~~----~~~av-----~~aDI 192 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVVTD----LEAAV-----RQADI 192 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEeCC----HHHHH-----hcCCE
Confidence 45678999999999999876444 4676699999999887655433 3 321 211111 22222 25899
Q ss_pred EEEcccChhh-HHHHHHHhhcCCcEEEEEcCC
Q 016933 269 SVECTGNIDN-MISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 269 v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 299 (380)
|+.++++... +. .+.++++ -.+..+|..
T Consensus 193 Vi~aT~s~~pvl~--~~~l~~g-~~i~~ig~~ 221 (314)
T PRK06141 193 ISCATLSTEPLVR--GEWLKPG-THLDLVGNF 221 (314)
T ss_pred EEEeeCCCCCEec--HHHcCCC-CEEEeeCCC
Confidence 9998887432 22 2567885 666667654
No 479
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=92.86 E-value=1.2 Score=40.87 Aligned_cols=82 Identities=26% Similarity=0.330 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcc
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 273 (380)
-.|++|.|+|-|.+|.+.++.++.+|. +|++..+.....+.++..|+. +. + +.+.++ ..|+|+-++
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~---s----l~Eaak-----~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM---S----VSEAVR-----TAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC---C----HHHHHh-----cCCEEEEeC
Confidence 367999999999999999999999999 887776665566666667763 21 1 333222 478988887
Q ss_pred cChhh---H-HHHHHHhhcC
Q 016933 274 GNIDN---M-ISAFECVHDG 289 (380)
Q Consensus 274 g~~~~---~-~~~~~~l~~~ 289 (380)
..+.. + ...+..++++
T Consensus 80 Pd~~t~~V~~~eil~~MK~G 99 (335)
T PRK13403 80 PDEQQAHVYKAEVEENLREG 99 (335)
T ss_pred CChHHHHHHHHHHHhcCCCC
Confidence 65332 2 2456666774
No 480
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=92.86 E-value=2 Score=36.83 Aligned_cols=98 Identities=20% Similarity=0.202 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceEecCCCCCccHHHHHHHHh-CCCccEE
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRS 269 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~----lG~~~vi~~~~~~~~~~~~~~~~~-~~~~d~v 269 (380)
++.+||=+|+|. |..+..+++.....+|++++.+++..+.+++ .+...+ .....+ ..+.+.... .+.+|.|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v-~~~~~d--~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNL-RLLCGD--AVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCE-EEEecC--HHHHHHHHcCccccceE
Confidence 567888888764 7777778877643489999999998887765 233222 111122 322232222 3368888
Q ss_pred EEccc--------------ChhhHHHHHHHhhcCCcEEEEEc
Q 016933 270 VECTG--------------NIDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 270 ~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~g 297 (380)
+-... ....+..+.+.|+++ |.+++.-
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 75332 134688889999997 9988763
No 481
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=92.84 E-value=0.45 Score=43.42 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~ 230 (380)
.+++++|+|+|++|.+++..+...|+++|++++++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 568899999999999988888889997799998885
No 482
>PRK08223 hypothetical protein; Validated
Probab=92.82 E-value=0.74 Score=41.63 Aligned_cols=34 Identities=29% Similarity=0.267 Sum_probs=30.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 016933 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (380)
Q Consensus 196 g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~ 229 (380)
..+|+|+|+|++|..+++.+-.+|++++..+|.+
T Consensus 27 ~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 27 NSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4789999999999999999999999888888654
No 483
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=92.82 E-value=0.83 Score=39.97 Aligned_cols=77 Identities=21% Similarity=0.211 Sum_probs=45.2
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHH-HHHhc---CCce-E--ecCCCCCccHHHHHHHHh--CCC
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFE-EAKKF---GVTD-F--VNTSEHDRPIQEVIAEMT--NGG 265 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~-~~~~~~-~~~~l---G~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 265 (380)
+++||+|+ |.+|...+..+...|+ +|+++.+ ++++.+ +..++ +... + .|..+. ..+.+.+.++. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF-ESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHcCC
Confidence 46899987 9999998888888899 7777766 444332 22222 2211 2 233221 11223332222 236
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999874
No 484
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=92.82 E-value=0.22 Score=44.18 Aligned_cols=97 Identities=20% Similarity=0.155 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--------eE-ecCCCCCccHHHHHHHHhCCC
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--------DF-VNTSEHDRPIQEVIAEMTNGG 265 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~--------~v-i~~~~~~~~~~~~~~~~~~~~ 265 (380)
..++|||+|+|. |..+-.+++.....+|.+++.+++-.+.++++-.. ++ +.. .| -.+.+++.....
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~--~D--g~~~l~~~~~~~ 150 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII--GD--GRKFLKETQEEK 150 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE--ST--HHHHHHTSSST-
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE--hh--hHHHHHhccCCc
Confidence 568999998654 45566777777666999999999988988874221 11 111 12 444455543327
Q ss_pred ccEEE-Eccc---------ChhhHHHHHHHhhcCCcEEEEEc
Q 016933 266 VDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG 297 (380)
Q Consensus 266 ~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 297 (380)
+|+|+ |... +.+.+..+.++|+++ |.++.-.
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 151 YDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 99975 6554 236788999999997 9888654
No 485
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=92.80 E-value=0.22 Score=44.16 Aligned_cols=66 Identities=21% Similarity=0.296 Sum_probs=45.6
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccCh
Q 016933 199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (380)
Q Consensus 199 vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 276 (380)
|+|.|+ |.+|...+...+..|. .|+.+.|++.+.+........ ..+.+......++|+|++.+|.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh-~v~iltR~~~~~~~~~~~~v~-----------~~~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH-QVTILTRRPPKASQNLHPNVT-----------LWEGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC-eEEEEEcCCcchhhhcCcccc-----------ccchhhhcccCCCCEEEECCCCc
Confidence 588987 9999999999999998 888888988877654332211 11112222222699999988863
No 486
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=92.80 E-value=0.78 Score=47.22 Aligned_cols=79 Identities=23% Similarity=0.353 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCce--E--ecCCCCCccHHHHHHHHh--
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD--F--VNTSEHDRPIQEVIAEMT-- 262 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-----lG~~~--v--i~~~~~~~~~~~~~~~~~-- 262 (380)
.++++||+|+ |.+|.+.+......|+ +|+.++++.++.+.+.+ .+... . .|..+. ..+.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~-~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE-QAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH-HHHHHHHHHHHHh
Confidence 4689999997 9999998888888899 89999888876554432 23211 1 232221 12333333322
Q ss_pred CCCccEEEEcccC
Q 016933 263 NGGVDRSVECTGN 275 (380)
Q Consensus 263 ~~~~d~v~d~~g~ 275 (380)
-+++|+++++.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2379999999884
No 487
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.79 E-value=0.95 Score=44.11 Aligned_cols=86 Identities=17% Similarity=0.276 Sum_probs=0.0
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccCh
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~-lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 276 (380)
+|+|+|+|.+|...++.+...|. .|+++++++++.+.+++ .|...+..... -...+.+..-.++|.++-+++..
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~~~~gd~~----~~~~l~~~~~~~a~~vi~~~~~~ 76 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVRTVVGNGS----SPDVLREAGAEDADLLIAVTDSD 76 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEEEEEeCCC----CHHHHHHcCCCcCCEEEEecCCh
Q ss_pred hhHHHHHHHhhc
Q 016933 277 DNMISAFECVHD 288 (380)
Q Consensus 277 ~~~~~~~~~l~~ 288 (380)
..-..+...++.
T Consensus 77 ~~n~~~~~~~r~ 88 (453)
T PRK09496 77 ETNMVACQIAKS 88 (453)
T ss_pred HHHHHHHHHHHH
No 488
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=92.75 E-value=0.89 Score=41.67 Aligned_cols=43 Identities=19% Similarity=0.321 Sum_probs=36.1
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~ 241 (380)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+++.|.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 58889999999877777777788 89999999999888887664
No 489
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=92.73 E-value=2.9 Score=40.34 Aligned_cols=35 Identities=31% Similarity=0.405 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEE-cCC
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV-DRS 229 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~-~~~ 229 (380)
-.|.+|+|.|.|.+|..+++.+..+|+ +|+++ +.+
T Consensus 235 l~Gk~VaVqG~GnVg~~aa~~L~e~Ga-kVVavSD~~ 270 (454)
T PTZ00079 235 LEGKTVVVSGSGNVAQYAVEKLLQLGA-KVLTMSDSD 270 (454)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEcCC
Confidence 468899999999999999999999999 78755 444
No 490
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=92.72 E-value=3.3 Score=38.52 Aligned_cols=134 Identities=19% Similarity=0.238 Sum_probs=77.4
Q ss_pred eEEEEcCCHHH-HHHHHHHHHcC--CcEEEEEcCChhHH-HHHHhcCCceEecCCCCCccHHHHHHHHhCC-CccEEEEc
Q 016933 198 SVAVFGLGAVG-LAAAEGARIAG--ASRIIGVDRSSKRF-EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 272 (380)
Q Consensus 198 ~vlI~G~g~~G-~~ai~la~~~g--~~~vi~~~~~~~~~-~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~-~~d~v~d~ 272 (380)
+|.|+|+|.++ ...+...+..+ +..+.+.++++++. +..+++|...++ .+ +. ++... .+|+|+-+
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~--~~----~~----~ll~~~~iD~V~Ia 74 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY--TD----LE----ELLADPDIDAVYIA 74 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc--CC----HH----HHhcCCCCCEEEEc
Confidence 57899987444 44555555554 43455557788775 455668875222 22 22 22333 59999999
Q ss_pred ccChhhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-cccc--cccEEEeeeecCCCCCCChHHHHHHHHcCCCC
Q 016933 273 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE 345 (380)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (380)
+....+.+.+.++|.. |+-|++..+-....-+... .... +++.+.-.+ ..+....++.+-+++.+|.+.
T Consensus 75 tp~~~H~e~~~~AL~a--GkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~--~~Rf~p~~~~~k~li~~g~lG 146 (342)
T COG0673 75 TPNALHAELALAALEA--GKHVLCEKPLALTLEEAEELVELARKAGVKLMVGF--NRRFDPAVQALKELIDSGALG 146 (342)
T ss_pred CCChhhHHHHHHHHhc--CCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeeh--hhhcCHHHHHHHHHHhcCCcC
Confidence 9988889999999988 6777776543211111110 0111 222222111 233334577788888888553
No 491
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=92.71 E-value=0.55 Score=43.18 Aligned_cols=96 Identities=18% Similarity=0.207 Sum_probs=53.5
Q ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEEEEcccCh-
Q 016933 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI- 276 (380)
Q Consensus 198 ~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~- 276 (380)
+|+|+|+|++|.+....+...|. .|..+.+++. .+.+++-|....-..................+.+|++|-++=..
T Consensus 2 kI~IlGaGAvG~l~g~~L~~~g~-~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa~q 79 (307)
T COG1893 2 KILILGAGAIGSLLGARLAKAGH-DVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKAYQ 79 (307)
T ss_pred eEEEECCcHHHHHHHHHHHhCCC-eEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEecccc
Confidence 68999999999887777777884 7877767665 77777767532211110000000011111123789998877542
Q ss_pred --hhHHHHHHHhhcCCcEEEEE
Q 016933 277 --DNMISAFECVHDGWGVAVLV 296 (380)
Q Consensus 277 --~~~~~~~~~l~~~~G~~v~~ 296 (380)
+.+......+.+. -.++++
T Consensus 80 ~~~al~~l~~~~~~~-t~vl~l 100 (307)
T COG1893 80 LEEALPSLAPLLGPN-TVVLFL 100 (307)
T ss_pred HHHHHHHhhhcCCCC-cEEEEE
Confidence 2333444444443 344433
No 492
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=92.70 E-value=0.43 Score=43.42 Aligned_cols=36 Identities=22% Similarity=0.407 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~ 230 (380)
+++++||+|+|+.+.+++..+...|+.++++++|++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567899999998898877766778988999999984
No 493
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.69 E-value=0.68 Score=45.12 Aligned_cols=70 Identities=31% Similarity=0.435 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHH----HHHHhcCCceEecCCCCCccHHHHHHHHhCCCccEE
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRF----EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~-~~~----~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~~d~v 269 (380)
.+++++|+|+|.+|+.++..+...|+ .|++++.+. +.. +.+.+.|...+. .+..+ +. .+++|+|
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~--------~~-~~~~d~v 72 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVL-GEYPE--------EF-LEGVDLV 72 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch--------hH-hhcCCEE
Confidence 46889999998899999999999999 899998764 222 334455654222 12111 11 1368999
Q ss_pred EEcccC
Q 016933 270 VECTGN 275 (380)
Q Consensus 270 ~d~~g~ 275 (380)
+.+.|.
T Consensus 73 v~~~g~ 78 (450)
T PRK14106 73 VVSPGV 78 (450)
T ss_pred EECCCC
Confidence 998885
No 494
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.65 E-value=0.78 Score=40.61 Aligned_cols=77 Identities=22% Similarity=0.323 Sum_probs=45.8
Q ss_pred CeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChh-HH-H---HHHhcCCc-eE--ecCCCCCccHHHHHHHHhC--CC
Q 016933 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RF-E---EAKKFGVT-DF--VNTSEHDRPIQEVIAEMTN--GG 265 (380)
Q Consensus 197 ~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~-~~-~---~~~~lG~~-~v--i~~~~~~~~~~~~~~~~~~--~~ 265 (380)
+++||+|+ |.+|...+......|+ +|+.++++.. +. + .++..+.. .+ .|..+.+ .+.+.+..+.. +.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVADLS-AHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHhcCC
Confidence 57899997 9999998888888899 7888876532 21 2 22223332 12 2333221 23333333322 36
Q ss_pred ccEEEEcccC
Q 016933 266 VDRSVECTGN 275 (380)
Q Consensus 266 ~d~v~d~~g~ 275 (380)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 8999999874
No 495
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=92.64 E-value=0.67 Score=38.98 Aligned_cols=45 Identities=27% Similarity=0.321 Sum_probs=32.0
Q ss_pred eEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCCh-------hHHHHHHhcCCc
Q 016933 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-------KRFEEAKKFGVT 242 (380)
Q Consensus 198 ~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~-------~~~~~~~~lG~~ 242 (380)
++||+|+ |++|+..++.....|..+++.+.++. +..+.+++.|+.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~ 54 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGAR 54 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-E
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCc
Confidence 6899986 99999988888878777999998882 233444555653
No 496
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=92.64 E-value=0.62 Score=47.72 Aligned_cols=77 Identities=23% Similarity=0.262 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCChh---------------------HHHHHHhcCCceEecCCCC-C
Q 016933 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-D 251 (380)
Q Consensus 194 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~~---------------------~~~~~~~lG~~~vi~~~~~-~ 251 (380)
+.+++|+|+|+|..|+.++..+...|. +|++++..+. ..+.++++|.+..++..-. +
T Consensus 191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~d 269 (652)
T PRK12814 191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRD 269 (652)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccCc
Confidence 457899999999999999999999999 7888876532 2455667887655443211 1
Q ss_pred ccHHHHHHHHhCCCccEEEEcccCh
Q 016933 252 RPIQEVIAEMTNGGVDRSVECTGNI 276 (380)
Q Consensus 252 ~~~~~~~~~~~~~~~d~v~d~~g~~ 276 (380)
-.+ +.+. ..+|.||-++|..
T Consensus 270 v~~-~~~~----~~~DaVilAtGa~ 289 (652)
T PRK12814 270 ITL-EELQ----KEFDAVLLAVGAQ 289 (652)
T ss_pred cCH-HHHH----hhcCEEEEEcCCC
Confidence 011 1121 1489999988863
No 497
>PRK06153 hypothetical protein; Provisional
Probab=92.60 E-value=1.7 Score=40.95 Aligned_cols=100 Identities=17% Similarity=0.154 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEEcCCh----------------------hHHHHHH----hcCCceEecCC
Q 016933 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS----------------------KRFEEAK----KFGVTDFVNTS 248 (380)
Q Consensus 195 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vi~~~~~~----------------------~~~~~~~----~lG~~~vi~~~ 248 (380)
.+.+|+|+|+|++|...+..+-..|.++++.++.+. .|.+.++ +++.+ +....
T Consensus 175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~-I~~~~ 253 (393)
T PRK06153 175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRG-IVPHP 253 (393)
T ss_pred hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCe-EEEEe
Confidence 357899999999999999988889998998886431 2222222 23321 11111
Q ss_pred CCCccHHHHHHHHhCCCccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCC
Q 016933 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299 (380)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 299 (380)
..- -.+.+..+ .++|+||+|+...+.-..+.+.+....--++.+|..
T Consensus 254 ~~I--~~~n~~~L--~~~DiV~dcvDn~~aR~~ln~~a~~~gIP~Id~G~~ 300 (393)
T PRK06153 254 EYI--DEDNVDEL--DGFTFVFVCVDKGSSRKLIVDYLEALGIPFIDVGMG 300 (393)
T ss_pred ecC--CHHHHHHh--cCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEeeec
Confidence 100 01122222 379999999998655444444444431345666653
No 498
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=92.60 E-value=1.7 Score=34.87 Aligned_cols=83 Identities=20% Similarity=0.220 Sum_probs=57.3
Q ss_pred hhccCC-CCCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceEecCCCCCccHHHHHHHHhCCC
Q 016933 188 LNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG 265 (380)
Q Consensus 188 ~~~~~~-~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~vi~~~~~~~~~~~~~~~~~~~~ 265 (380)
.+..++ -.|++|+|+|- ..+|.-.+.++...|+ +|+...+.... +.+.++ .
T Consensus 19 l~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~~---------------------l~~~v~-----~ 71 (140)
T cd05212 19 LNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTIQ---------------------LQSKVH-----D 71 (140)
T ss_pred HHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCcC---------------------HHHHHh-----h
Confidence 333343 46899999996 8999999999988898 88887543211 222222 4
Q ss_pred ccEEEEcccChhhHHHHHHHhhcCCcEEEEEcCCC
Q 016933 266 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (380)
Q Consensus 266 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 300 (380)
.|+|+-++|.+..+. -+.++++ -.++.+|...
T Consensus 72 ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~~ 103 (140)
T cd05212 72 ADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPTK 103 (140)
T ss_pred CCEEEEecCCCCccC--HHHcCCC-CEEEEcCCCc
Confidence 799999999875544 4558886 7777776543
No 499
>PRK05855 short chain dehydrogenase; Validated
Probab=92.60 E-value=0.68 Score=46.51 Aligned_cols=79 Identities=23% Similarity=0.276 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-E--ecCCCCCccHHHHHHHHh--CC
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 264 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~----~lG~~~-v--i~~~~~~~~~~~~~~~~~--~~ 264 (380)
.+.++||+|+ |++|...+..+...|+ +|+.++++.++.+.+. +.|... + .|..+.+ ...+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDAD-AMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence 4578999997 9999998888888899 7999989887665432 334322 2 2333322 1223333322 23
Q ss_pred CccEEEEcccC
Q 016933 265 GVDRSVECTGN 275 (380)
Q Consensus 265 ~~d~v~d~~g~ 275 (380)
.+|++++++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 69999999875
No 500
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=92.58 E-value=0.68 Score=40.89 Aligned_cols=74 Identities=26% Similarity=0.324 Sum_probs=46.5
Q ss_pred CCCeEEEEcC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-Ee--cCCCCCccHHHHHHHHhC--CCccE
Q 016933 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GGVDR 268 (380)
Q Consensus 195 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vi~~~~~~~~~~~~~~lG~~~-vi--~~~~~~~~~~~~~~~~~~--~~~d~ 268 (380)
+++++||+|+ |.+|...+......|+ +|+.++++. +...+... .+ |..+. ..+.+.+.+... +.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDA-AAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 4688999997 8999998888888899 888887765 22222211 22 22221 123333333221 36899
Q ss_pred EEEcccC
Q 016933 269 SVECTGN 275 (380)
Q Consensus 269 v~d~~g~ 275 (380)
++.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999875
Done!