Query 016934
Match_columns 380
No_of_seqs 176 out of 1587
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 06:12:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016934.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016934hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3op1_A Macrolide-efflux protei 100.0 3.6E-68 1.2E-72 520.6 21.7 243 104-377 20-279 (308)
2 2x0k_A Riboflavin biosynthesis 100.0 1.3E-64 4.5E-69 501.2 20.0 246 104-377 15-289 (338)
3 1mrz_A Riboflavin kinase/FMN a 100.0 7.2E-62 2.5E-66 473.3 22.9 235 106-377 1-252 (293)
4 3glv_A Lipopolysaccharide core 99.9 4.9E-26 1.7E-30 198.6 9.5 134 105-276 3-139 (143)
5 3bnw_A Riboflavin kinase, puta 99.9 1.6E-24 5.6E-29 197.3 7.6 90 281-377 11-122 (181)
6 1n08_A Putative riboflavin kin 99.9 3.6E-24 1.2E-28 192.2 8.8 89 282-377 18-118 (163)
7 1nb0_A Hypothetical protein FL 99.9 5E-23 1.7E-27 182.0 8.0 86 285-377 2-100 (147)
8 2b7l_A Glycerol-3-phosphate cy 99.8 4.9E-21 1.7E-25 163.4 8.2 127 105-276 2-130 (132)
9 2ejc_A Pantoate--beta-alanine 99.8 2.4E-21 8.1E-26 187.3 0.8 131 105-244 22-178 (280)
10 1coz_A Protein (glycerol-3-pho 99.8 2.7E-20 9.1E-25 158.1 6.7 125 105-274 2-128 (129)
11 2qtr_A Nicotinate (nicotinamid 99.8 5.7E-20 1.9E-24 165.2 6.5 146 105-276 3-167 (189)
12 1v8f_A Pantoate-beta-alanine l 99.8 6.7E-21 2.3E-25 183.7 -3.5 140 105-269 20-186 (276)
13 1o6b_A Phosphopantetheine aden 99.8 1.4E-18 4.9E-23 154.0 11.6 137 105-276 3-140 (169)
14 1qjc_A Phosphopantetheine aden 99.7 2.7E-17 9.2E-22 143.5 13.7 133 105-276 2-139 (158)
15 3gmi_A UPF0348 protein MJ0951; 99.7 6.4E-17 2.2E-21 161.1 16.9 95 104-210 52-151 (357)
16 3ag6_A Pantothenate synthetase 99.7 6.4E-19 2.2E-23 170.4 0.2 127 106-244 27-179 (283)
17 1od6_A PPAT, phosphopantethein 99.7 1.1E-16 3.9E-21 139.9 14.0 133 107-276 3-140 (160)
18 3hl4_A Choline-phosphate cytid 99.7 6E-17 2E-21 152.9 8.2 145 105-289 77-226 (236)
19 3cov_A Pantothenate synthetase 99.6 4.7E-18 1.6E-22 165.6 -4.3 126 106-244 37-190 (301)
20 1kam_A Deamido-NAD(+), nicotin 99.6 6.6E-16 2.3E-20 140.0 9.1 159 105-276 8-172 (194)
21 1ej2_A Nicotinamide mononucleo 99.6 4.9E-16 1.7E-20 139.8 7.7 132 106-276 5-143 (181)
22 3elb_A Ethanolamine-phosphate 99.6 2.2E-15 7.4E-20 149.3 12.4 132 104-274 7-140 (341)
23 2qjo_A Bifunctional NMN adenyl 99.6 4.1E-15 1.4E-19 143.5 10.2 138 105-278 8-154 (341)
24 3k9w_A Phosphopantetheine aden 99.6 1.3E-14 4.4E-19 132.6 12.2 130 105-276 23-160 (187)
25 1k4m_A NAMN adenylyltransferas 99.6 1.5E-14 5.3E-19 133.0 11.2 115 107-229 6-127 (213)
26 2h29_A Probable nicotinate-nuc 99.3 1.2E-11 4.1E-16 111.5 9.8 160 105-276 3-167 (189)
27 3do8_A Phosphopantetheine aden 99.2 1.5E-12 5.1E-17 114.6 2.3 132 107-274 3-142 (148)
28 4f3r_A Phosphopantetheine aden 99.2 6.3E-11 2.2E-15 105.7 11.0 129 105-276 6-142 (162)
29 1f9a_A Hypothetical protein MJ 99.2 6.9E-11 2.3E-15 104.9 10.8 131 106-276 2-137 (168)
30 1kqn_A Nmnat, nicotinamide mon 99.2 2.3E-10 8E-15 110.1 13.8 92 104-201 8-106 (279)
31 3f3m_A Phosphopantetheine aden 99.1 2.9E-10 9.8E-15 102.1 12.4 131 105-276 4-141 (168)
32 3nv7_A Phosphopantetheine aden 99.1 6.6E-11 2.3E-15 105.2 7.8 131 105-276 3-140 (157)
33 1yum_A 'probable nicotinate-nu 99.1 2.6E-10 8.9E-15 107.5 12.2 111 105-223 24-141 (242)
34 1nup_A FKSG76; NAD biosynthesi 99.1 5.2E-10 1.8E-14 105.8 13.6 73 105-181 7-86 (252)
35 3nd5_A Phosphopantetheine aden 99.0 1.9E-09 6.5E-14 97.0 12.1 132 105-276 3-141 (171)
36 1vlh_A Phosphopantetheine aden 98.9 1.7E-08 5.7E-13 90.3 15.1 130 106-276 14-150 (173)
37 3uk2_A Pantothenate synthetase 98.9 9.5E-09 3.2E-13 99.2 12.4 129 106-242 23-177 (283)
38 3nbk_A Phosphopantetheine aden 98.9 1.5E-08 5E-13 91.9 11.9 131 105-275 22-157 (177)
39 3h05_A Uncharacterized protein 98.8 6.4E-09 2.2E-13 93.8 6.8 140 105-276 3-150 (177)
40 3elb_A Ethanolamine-phosphate 98.7 1.6E-07 5.5E-12 93.0 13.6 133 105-276 199-338 (341)
41 1lw7_A Transcriptional regulat 98.7 1.4E-07 4.7E-12 92.6 12.1 160 106-293 4-178 (365)
42 1v47_A ATP sulfurylase; produc 98.6 3.2E-07 1.1E-11 91.1 12.2 163 105-276 156-330 (349)
43 1jhd_A Sulfate adenylyltransfe 98.5 1.3E-06 4.3E-11 88.2 14.5 161 105-276 193-372 (396)
44 2qjt_B Nicotinamide-nucleotide 98.2 9.3E-06 3.2E-10 78.5 11.6 72 105-181 8-85 (352)
45 3inn_A Pantothenate synthetase 98.2 2E-06 6.9E-11 84.0 6.6 121 109-241 50-194 (314)
46 1r6x_A ATP:sulfate adenylyltra 97.5 0.0021 7E-08 64.8 15.8 162 105-278 188-370 (395)
47 1g8f_A Sulfate adenylyltransfe 96.7 0.021 7.2E-07 59.2 14.4 162 105-278 189-371 (511)
48 2gks_A Bifunctional SAT/APS ki 96.6 0.018 6E-07 60.0 13.0 164 105-278 164-348 (546)
49 3mxt_A Pantothenate synthetase 96.0 0.06 2E-06 52.0 12.1 122 106-239 29-173 (285)
50 1m8p_A Sulfate adenylyltransfe 96.0 0.15 5.1E-06 53.3 15.9 162 105-276 191-370 (573)
51 1x6v_B Bifunctional 3'-phospho 95.7 0.13 4.5E-06 54.6 14.2 163 105-277 413-600 (630)
52 3q12_A Pantoate--beta-alanine 93.8 0.049 1.7E-06 52.6 4.6 121 109-240 32-177 (287)
53 3cr8_A Sulfate adenylyltranfer 93.4 0.44 1.5E-05 49.7 11.3 160 105-277 164-344 (552)
54 3n8h_A Pantothenate synthetase 92.9 0.097 3.3E-06 49.9 5.0 159 106-276 28-213 (264)
55 1vhx_A Putative holliday junct 70.3 11 0.00038 32.4 7.0 65 191-277 44-114 (150)
56 1iv0_A Hypothetical protein; r 48.9 63 0.0021 25.7 7.4 48 192-240 41-92 (98)
57 2i5g_A Amidohydrolase; NYSGXRC 39.1 89 0.003 30.1 8.2 57 156-216 194-254 (325)
58 2l42_A DNA-binding protein RAP 33.1 1E+02 0.0034 25.3 6.2 69 217-286 27-95 (106)
59 2p7i_A Hypothetical protein; p 28.3 2.1E+02 0.007 24.3 8.1 47 215-277 172-218 (250)
60 1rvg_A Fructose-1,6-bisphospha 26.9 2.4E+02 0.0083 27.0 8.9 81 188-275 153-246 (305)
61 3dah_A Ribose-phosphate pyroph 22.9 3.5E+02 0.012 25.8 9.3 163 56-240 14-196 (319)
62 3lcc_A Putative methyl chlorid 22.6 1.4E+02 0.0049 25.6 6.0 54 189-242 149-207 (235)
63 2h54_A Caspase-1; allosteric s 22.2 1.4E+02 0.0049 26.0 5.9 48 205-273 46-97 (178)
64 1nu0_A Hypothetical protein YQ 21.3 28 0.00097 29.5 1.0 47 192-240 43-95 (138)
65 1z3e_A Regulatory protein SPX; 21.0 1.5E+02 0.0051 24.1 5.4 28 282-321 89-116 (132)
66 1itu_A Renal dipeptidase; glyc 20.0 5.7E+02 0.02 24.9 10.2 53 157-213 234-290 (369)
No 1
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=100.00 E-value=3.6e-68 Score=520.57 Aligned_cols=243 Identities=25% Similarity=0.367 Sum_probs=213.0
Q ss_pred CceEEEEeecCccCHHHHHHHHHHHHh----CCC-EEEeecC-ccccccc-C--CCCCCCChHHHHHHHHhcCCccCeEE
Q 016934 104 AGGIVALGKFDALHIGHRELAIQASKI----GAP-YLLSFIG-MAEVFGW-E--PRAPIVAKCDRKRVLSSWAPYCGNVA 174 (380)
Q Consensus 104 ~~~vvtIG~FDGvHlGHq~LI~~A~~~----g~~-~VvtF~~-P~~vl~~-~--~~~~l~s~~~R~~lL~~lg~~vD~vv 174 (380)
.++|+|||+|||||+|||+||++|++. +.+ +|+||+| |++++.+ + +..+|++.++|+++|+.+| ||.++
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lG--VD~v~ 97 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREG--VEELY 97 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHT--CCEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcC--CCEEE
Confidence 578999999999999999999999876 345 6799999 9998865 2 2345889999999999999 99999
Q ss_pred EEeccccccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccC
Q 016934 175 PVEFQIQFSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDC 254 (380)
Q Consensus 175 ~~~F~~~Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~ 254 (380)
+++|+.+|+ ++||++|++.++++|+++.+|||+|||||+ ++||+++|++++++ +|++++++..++
T Consensus 98 ~~~F~~~~a---~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~~---~V~~v~~~~~~~-------- 162 (308)
T 3op1_A 98 LLDFSSQFA---SLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFDG---EVIIVPPVEDEK-------- 162 (308)
T ss_dssp EECCCHHHH---TCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCSTTHHHHCSS---EEEEECCCBCSS--------
T ss_pred EecCCHHHH---cCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHHHHHHhCCC---CEEEeCCEecCC--------
Confidence 999999999 699999999877899999999999999999 99999999999874 899999887553
Q ss_pred CCCccCCccchHHHHHHHHcCCchhhhhhcceeeeEEEEEeecccccccCCCcccCCCCCCCC----CCCCCCcEEEEEE
Q 016934 255 NDSKERGQVSSTRVRQALAMGDMKYVSELLGRQHRLILTVNDHDELISTSNKHRVSVPKSCLL----NLPPKEGFYGNSV 330 (380)
Q Consensus 255 ~~~~~~~~ISST~IR~~L~~GdI~~An~LLGrpy~i~G~Vv~G~~~~~~~~Gr~lGfPTANl~----~llP~~GVYav~v 330 (380)
++||||+||++|++|||++|++||||||+++|+|+||+++ ||+||||||||. +++|++||||+++
T Consensus 163 ------~~ISST~IR~~L~~G~v~~A~~lLGrpy~i~G~Vv~G~~~-----Gr~lGfPTANl~~~~~~~~P~~GVYa~~v 231 (308)
T 3op1_A 163 ------GKISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGNAR-----GRTIGYPTANLVLLDRTYMPADGVYVVDV 231 (308)
T ss_dssp ------CBCCHHHHHHHHHHTCHHHHHHHHSSCCEEEEEEEBCC-----------CCCCEEEEECSSBCCCCSEEEEEEE
T ss_pred ------ceEeHHHHHHHHHcCCHHHHHhhcCcceeEEEEEEECCcc-----CcccCCCcEeecCcccccCCCCceEEEEE
Confidence 7899999999999999999999999999999999999988 999999999994 5889999999999
Q ss_pred EEcCccc----ceeeceEEeCCceEEEEeeccCCCCCCCCCCceEEEEEcc
Q 016934 331 LLFGEEN----PVKCRICIDASHIHLEMDKVGFCNFDHSQDFKLLGIEFGD 377 (380)
Q Consensus 331 ~~~g~~~----~iG~rpt~~~~~~~vE~h~l~~~df~~~~yg~~l~vef~~ 377 (380)
.++|.++ |||.||||++....||||++ ||++|+||+.|+|+|.+
T Consensus 232 ~~~~~~~~gv~niG~~PT~~~~~~~vE~hil---df~~dlYG~~i~v~f~~ 279 (308)
T 3op1_A 232 EIQRQKYRAMASVGKNVTFDGEEARFEVNIF---DFNQDIYGETVMVYWLD 279 (308)
T ss_dssp EETTEEEEEEEEECBTTTBC--CCEEEEEET---TCCCCCTTCEEEEEEEE
T ss_pred EECCEEEEEEEEeccCCccCCCceEEEEEEe---cCCCccCCCEEEEEEHH
Confidence 9988776 68999999887789999665 59999999999999953
No 2
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=100.00 E-value=1.3e-64 Score=501.21 Aligned_cols=246 Identities=25% Similarity=0.333 Sum_probs=221.9
Q ss_pred CceEEEEeecCccCHHHHHHHHHHHHh----CCC-EEEeecC-cccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEE
Q 016934 104 AGGIVALGKFDALHIGHRELAIQASKI----GAP-YLLSFIG-MAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPV 176 (380)
Q Consensus 104 ~~~vvtIG~FDGvHlGHq~LI~~A~~~----g~~-~VvtF~~-P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~ 176 (380)
.++|+|+|+|||||+|||+||++|++. +.+ +|+||+| |.+++.++. ..++++.++|+++|+.+| +|+++++
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~g--VD~v~v~ 92 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFG--IDGVLVI 92 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTT--CSEEEEE
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcC--CCEEEEc
Confidence 458999999999999999999998754 565 6799999 998886543 245889999999999998 9999999
Q ss_pred eccccccccCCCCHHHHHHH-HHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCC
Q 016934 177 EFQIQFSSVRHLSPQQFVEK-LSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCN 255 (380)
Q Consensus 177 ~F~~~Fa~i~~ls~e~Fie~-L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~ 255 (380)
+|+.+|+ +++|++|++. |++.|+++.+|||+||+||++++||+++|++++++ ||+|.+++++..++
T Consensus 93 ~F~~~~a---~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~-g~~V~~v~~~~~~~--------- 159 (338)
T 2x0k_A 93 DFTRELS---GTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQS-RLTVDVIDLLDDEG--------- 159 (338)
T ss_dssp CTTTSSS---SCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTT-TSEEEEECCCEETT---------
T ss_pred cccHHHH---hCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcC-CeEEEEECcEecCC---------
Confidence 9999998 6999999998 67889999999999999999999999999999999 99999999987653
Q ss_pred CCccCCccchHHHHHHHHcCCchhhhhhcceeeeEEEEEeecccccccCCC-cccCCCCCCCC----CCCCCCcEEEEEE
Q 016934 256 DSKERGQVSSTRVRQALAMGDMKYVSELLGRQHRLILTVNDHDELISTSNK-HRVSVPKSCLL----NLPPKEGFYGNSV 330 (380)
Q Consensus 256 ~~~~~~~ISST~IR~~L~~GdI~~An~LLGrpy~i~G~Vv~G~~~~~~~~G-r~lGfPTANl~----~llP~~GVYav~v 330 (380)
.+||||+||++|++|||+.|++||||||.++|+|+||+++ | |+||||||||. +++|++|||++++
T Consensus 160 -----~~ISST~IR~~L~~G~i~~a~~lLGrpy~i~G~Vv~G~~~-----Gsr~lGfPTANl~~~~~~~~P~~GVYa~~v 229 (338)
T 2x0k_A 160 -----VRISSTTVREFLSEGDVARANWALGRHFYVTGPVVRGAGR-----GGKELGFPTANQYFHDTVALPADGVYAGWL 229 (338)
T ss_dssp -----EECSHHHHHHHHHTTCHHHHHHHHTSCCEEEEECBCCSSC-----SSSCTTSCSEEEEECTTBCCCCSEEEEEEE
T ss_pred -----cccccchHHHHHhcCcHHHHHHhcceeeEEEEEEecCccc-----ccceecccccccCCcccccCCCCeEEEEEE
Confidence 7899999999999999999999999999999999999988 8 99999999993 5789999999999
Q ss_pred EEc------------Cccc----ceeeceEEeCCceEEEEeeccCCCCCCCCCCceEEEEEcc
Q 016934 331 LLF------------GEEN----PVKCRICIDASHIHLEMDKVGFCNFDHSQDFKLLGIEFGD 377 (380)
Q Consensus 331 ~~~------------g~~~----~iG~rpt~~~~~~~vE~h~l~~~df~~~~yg~~l~vef~~ 377 (380)
.++ +.++ |||+||||++....||||++| |++|+||+.|+|+|.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~gv~niG~~PT~~~~~~~vE~hild---f~~dlYg~~i~v~f~~ 289 (338)
T 2x0k_A 230 TILPTEAPVSGNMEPEVAYAAAISVGTNPTFGDEQRSVESFVLD---RDADLYGHDVKVEFVD 289 (338)
T ss_dssp EECSCCSCCEESCCTTCEEEEEEEEEEETTTCTTEEEEEEEETT---CCEECTTCEEEEEEEE
T ss_pred EECccccccccccCCCCEEEEEEEEcCCCccCCCcceEEEEeec---CCcccCCCEEEEEEeh
Confidence 886 5555 699999998777789997665 8999999999999954
No 3
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=100.00 E-value=7.2e-62 Score=473.30 Aligned_cols=235 Identities=26% Similarity=0.391 Sum_probs=193.1
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHh----CCC-EEEeecC-cccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKI----GAP-YLLSFIG-MAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQ 179 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~----g~~-~VvtF~~-P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~ 179 (380)
+|+|+|+|||+|+|||+||++|++. +.+ +|+||+| | +++.+++..++++.++|.++|+++| .+++++|
T Consensus 1 ~vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP-~~l~~~~~~~l~~~~eR~~ll~~lg----~~~v~~F- 74 (293)
T 1mrz_A 1 MVVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPP-EYFLPDFPGLLMTVESRVEMLSRYA----RTVVLDF- 74 (293)
T ss_dssp -CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCG-GGGSTTCCCBSSCHHHHHHHHTTTS----CEEEECH-
T ss_pred CEEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCH-HHhCCCCCCCCCCHHHHHHHHHhCC----CEEEEEh-
Confidence 4699999999999999999998754 455 7899998 8 8887653456899999999999987 5577899
Q ss_pred ccccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCcc
Q 016934 180 IQFSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKE 259 (380)
Q Consensus 180 ~~Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~ 259 (380)
.+|+ +++|++|++.++ |+++.+|+|+||+||++++||+++|++ +|++|.+++++..++
T Consensus 75 ~~~a---~ls~~~Fi~~il--l~~~~iVvG~Df~fG~~~~g~~~~L~~----~G~~V~~v~~~~~~~------------- 132 (293)
T 1mrz_A 75 FRIK---DLTPEGFVERYL--SGVSAVVVGRDFRFGKNASGNASFLRK----KGVEVYEIEDVVVQG------------- 132 (293)
T ss_dssp HHHT---TCCHHHHHHHHC--TTCCEEEEETTCCBSGGGCBCHHHHHH----TTCEEEEECCCEETT-------------
T ss_pred HHhh---cCCHHHHHHHHh--cCCCEEEECCCCCCCCCCCCCHHHHHh----CCCEEEEECCEEeCC-------------
Confidence 8888 699999999866 999999999999999999999999987 899999999987653
Q ss_pred CCccchHHHHHHHHcCCchhhhhhcceeeeEEEEEeecccccccCCCcccCCCCCCCC-----CCCCCCcEEEEEEEE-c
Q 016934 260 RGQVSSTRVRQALAMGDMKYVSELLGRQHRLILTVNDHDELISTSNKHRVSVPKSCLL-----NLPPKEGFYGNSVLL-F 333 (380)
Q Consensus 260 ~~~ISST~IR~~L~~GdI~~An~LLGrpy~i~G~Vv~G~~~~~~~~Gr~lGfPTANl~-----~llP~~GVYav~v~~-~ 333 (380)
.+||||+||++|++||+++|++||||||+++|+|+||+++ ||+||||||||. +++|++||||+++.+ +
T Consensus 133 -~~iSST~IR~~L~~G~i~~a~~lLGr~y~i~G~Vv~G~~~-----Gr~lGfPTaNl~~~~~~~~~P~~GVYa~~v~~~~ 206 (293)
T 1mrz_A 133 -KRVSSSLIRNLVQEGRVEEIPAYLGRYFEIEGIVHKDREF-----GRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPD 206 (293)
T ss_dssp -EECCHHHHHHHHHTTCTTTTHHHHSSCCEEEEEC----------------CCCEECBCCSSCBCCCCSEEEEEEEECGG
T ss_pred -ccccHhHHHHHHhcCcHHHHhhhcCCCeEEEEEEccCccc-----cceecccceEeccCccCcCCCCCeEEEEEEEEec
Confidence 7899999999999999999999999999999999999988 999999999993 478999999999988 7
Q ss_pred Cccc----ceeeceEEeCC-ceEEEEeeccCCCCCCCCCCceEEEEEcc
Q 016934 334 GEEN----PVKCRICIDAS-HIHLEMDKVGFCNFDHSQDFKLLGIEFGD 377 (380)
Q Consensus 334 g~~~----~iG~rpt~~~~-~~~vE~h~l~~~df~~~~yg~~l~vef~~ 377 (380)
+.++ |||+||||++. ...+|||++ ||++|+||+.|+|+|.+
T Consensus 207 ~~~~~gv~niG~~PT~~~~~~~~iE~hil---df~~dlYg~~i~v~f~~ 252 (293)
T 1mrz_A 207 GKKKFGVMNVGFRPTVGDARNVKYEVYIL---DFEGDLYGQRLKLEVLK 252 (293)
T ss_dssp GCEEEEEEEEEEC------CCEEEEEEET---TCCSCCTTCEEEEEEEE
T ss_pred CcEEEEEEEeccCcccCCCccceEEEEec---cCCcccCCCEEEEEEHH
Confidence 7665 68999999875 478999665 59999999999999954
No 4
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.93 E-value=4.9e-26 Score=198.55 Aligned_cols=134 Identities=19% Similarity=0.218 Sum_probs=96.9
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCC--EEEeecC-cccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAP--YLLSFIG-MAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQ 181 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~--~VvtF~~-P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~ 181 (380)
..++++|+|||+|+|||.||++|++.+.. ++++|++ |.. ....++++.++|.++++.++ ++|.+++
T Consensus 3 ~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~----~~~~~l~~~~eR~~~l~~~~-~vd~v~~------ 71 (143)
T 3glv_A 3 IRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARN----NGKIPIFDENSRLALISELK-VVDRAIL------ 71 (143)
T ss_dssp CEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHH----TTCCCSSCHHHHHHHHTTBT-TCSEEEE------
T ss_pred eEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhh----cCCCCCCCHHHHHHHHHhcC-CCCEEEE------
Confidence 46899999999999999999999998764 3478876 543 22357899999999999987 4898775
Q ss_pred ccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCC
Q 016934 182 FSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERG 261 (380)
Q Consensus 182 Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~ 261 (380)
+++++|++ ++++++++.||+|+||+|| .++|+++++++|+++.+++.+..+ +.
T Consensus 72 ------~~~~~f~~-~~~~l~~~~iv~G~d~~f~------~~~l~~~~~~~g~~v~vv~~~~~~--------------~~ 124 (143)
T 3glv_A 72 ------GHEGDMMK-TVIEVKPDIITLGYDQKFD------EAELQSKINKLGITVKIVRISKYD--------------GQ 124 (143)
T ss_dssp ------CCTTCHHH-HHHHHCCSEEEECTTCHHH------HHHHHHHHHHHTCCCEEEECCCCC----------------
T ss_pred ------cCchhHHH-HHHhcCCCEEEECCCCCCC------HHHHHHHHHHcCCeEEEEEeeccC--------------CC
Confidence 25667887 6789999999999999995 579999999999999999886543 36
Q ss_pred ccchHHHHHHHHcCC
Q 016934 262 QVSSTRVRQALAMGD 276 (380)
Q Consensus 262 ~ISST~IR~~L~~Gd 276 (380)
.||||+||++|.+..
T Consensus 125 ~iSST~IR~~i~~~~ 139 (143)
T 3glv_A 125 LNSSSSVRKKIMELI 139 (143)
T ss_dssp ---------------
T ss_pred cCCHHHHHHHHHHHh
Confidence 899999999998764
No 5
>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei}
Probab=99.90 E-value=1.6e-24 Score=197.30 Aligned_cols=90 Identities=11% Similarity=-0.049 Sum_probs=68.6
Q ss_pred hhhcceeeeEEEEEeecccccccCCC-cccCCCCCCCC-C------C-CCCCcEEEEEEEEcC---------ccc----c
Q 016934 281 SELLGRQHRLILTVNDHDELISTSNK-HRVSVPKSCLL-N------L-PPKEGFYGNSVLLFG---------EEN----P 338 (380)
Q Consensus 281 n~LLGrpy~i~G~Vv~G~~~~~~~~G-r~lGfPTANl~-~------l-lP~~GVYav~v~~~g---------~~~----~ 338 (380)
.+||||||.++|+|+||+++ | |+||||||||. . + +|+.|||++|+.+++ .++ |
T Consensus 11 ~~lLGrpy~i~G~Vv~G~~r-----Grr~LGfPTANl~l~~~~~~~~~~p~~GVYa~~v~~~~~~~~~~~~~~~~~gv~n 85 (181)
T 3bnw_A 11 QTGSFQPFFLRGKVVHGKGR-----GGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWGTVSQVPGKERESFGPYPFAAS 85 (181)
T ss_dssp CCTTSCCEEEEEEEEC-----------CCSCCCCCEECCCHHHHHHHGGGTTEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred HHhCCCCeEEEEEEEeCCcc-----CccccCCccccccccccccccccCCCCEEEEEEEEECCcccccccCCceeEEEEE
Confidence 57999999999999999988 8 67999999996 1 2 388999999998866 444 6
Q ss_pred eeeceEEeCCceEEEEeeccCCCCCCCCCCceEEEEEcc
Q 016934 339 VKCRICIDASHIHLEMDKVGFCNFDHSQDFKLLGIEFGD 377 (380)
Q Consensus 339 iG~rpt~~~~~~~vE~h~l~~~df~~~~yg~~l~vef~~ 377 (380)
||+||||+++...||||++| ||++|+||+.|+|+|..
T Consensus 86 IG~nPTf~~~~~~vEvhilh--DF~~DlYG~~i~V~fl~ 122 (181)
T 3bnw_A 86 IGFNMQFDEKTLTVEPYFLH--EFGWDFYGAVVKIIVLG 122 (181)
T ss_dssp EECC------CCEEEEEESS--CCSSCCTTCEEEEEEEE
T ss_pred ecCCCeECCCeeEEEEEEcC--CCCCccCCCEEEEEEeh
Confidence 99999998777889998886 89999999999999953
No 6
>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*
Probab=99.90 E-value=3.6e-24 Score=192.22 Aligned_cols=89 Identities=8% Similarity=-0.059 Sum_probs=78.6
Q ss_pred hhcceeeeEEEEEeecccccccCCC-cccCCCCCCCCC-------CCCCCcEEEEEEEEcCccc----ceeeceEEeCCc
Q 016934 282 ELLGRQHRLILTVNDHDELISTSNK-HRVSVPKSCLLN-------LPPKEGFYGNSVLLFGEEN----PVKCRICIDASH 349 (380)
Q Consensus 282 ~LLGrpy~i~G~Vv~G~~~~~~~~G-r~lGfPTANl~~-------llP~~GVYav~v~~~g~~~----~iG~rpt~~~~~ 349 (380)
.++||||.++|+|+||+++ | |+||||||||.. ++|+.|||++++.+++.++ |||+||||++..
T Consensus 18 ~~~Grpy~i~G~Vv~G~~r-----Grr~LGfPTANl~~~~~~~~~~~p~~GVYa~~v~~~~~~~~gv~nIG~~PTf~~~~ 92 (163)
T 1n08_A 18 VQSPYPIRFEGKVVHGFGR-----GSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKRVFPMVMSVGWNPYYKNKL 92 (163)
T ss_dssp CCTTCCEEEEEEEECCSSS-----CGGGGTCCCEEECGGGTTTTTTTSCSEEEEEEEEETTEEEEEEEEEEECTTCSSCC
T ss_pred CCCCCCEEEEEEEEeCCcc-----CCCccCcCCCcccCcccccccCCCCCEEEEEEEEECCEEEEEEEEeCCCCeECCCc
Confidence 5799999999999999988 8 679999999951 5689999999999877654 689999998777
Q ss_pred eEEEEeeccCCCCCCCCCCceEEEEEcc
Q 016934 350 IHLEMDKVGFCNFDHSQDFKLLGIEFGD 377 (380)
Q Consensus 350 ~~vE~h~l~~~df~~~~yg~~l~vef~~ 377 (380)
..||||++| ||++|+||+.|+|+|..
T Consensus 93 ~~vEvhil~--df~~dlYG~~i~V~f~~ 118 (163)
T 1n08_A 93 RSAEVHLIE--RQGEDFYEEIMRVIVLG 118 (163)
T ss_dssp EEEEEEETT--CCSCCCTTCEEEEEEEE
T ss_pred eEEEEEEec--CCCCccCCCEEEEEEHH
Confidence 889998886 89999999999999953
No 7
>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*
Probab=99.88 E-value=5e-23 Score=182.01 Aligned_cols=86 Identities=10% Similarity=0.055 Sum_probs=74.6
Q ss_pred ceeeeEEEEEeecccccccCCC-cccCCCCCCCC----CCCC---CCcEEEEEEEEc-Cccc----ceeeceEEeCCceE
Q 016934 285 GRQHRLILTVNDHDELISTSNK-HRVSVPKSCLL----NLPP---KEGFYGNSVLLF-GEEN----PVKCRICIDASHIH 351 (380)
Q Consensus 285 Grpy~i~G~Vv~G~~~~~~~~G-r~lGfPTANl~----~llP---~~GVYav~v~~~-g~~~----~iG~rpt~~~~~~~ 351 (380)
.|||.++|+|+||+++ | |+||||||||. +++| +.|||++++.+. +.++ |||+||||++....
T Consensus 2 ~~py~i~G~Vv~G~~r-----Grr~LGfPTANl~~~~~~~~P~~~~~GVYa~~v~~~~~~~~~gv~nIG~~PT~~~~~~~ 76 (147)
T 1nb0_A 2 HLPYFCRGQVVRGFGR-----GSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKS 76 (147)
T ss_dssp CCSEEEEEECBCCSSS-----CGGGGTCCCEECCHHHHHTSCTTCCSEEEEEEEEETTCCCEEEEEEEEECSSSSSSCEE
T ss_pred CccEEEEEEEEeCCcc-----CccccCCccEEEEccccccCCCCCCCEEEEEEEEECCCCEEEEEEEecCCCeECCCceE
Confidence 4899999999999988 8 67999999996 3677 799999999884 4434 68999999877778
Q ss_pred EEEeeccCCCCCCCCCCceEEEEEcc
Q 016934 352 LEMDKVGFCNFDHSQDFKLLGIEFGD 377 (380)
Q Consensus 352 vE~h~l~~~df~~~~yg~~l~vef~~ 377 (380)
||||++| ||++|+||+.|+|+|..
T Consensus 77 vEvhil~--df~~dlYG~~i~v~f~~ 100 (147)
T 1nb0_A 77 METHIMH--TFKEDFYGEILNVAIVG 100 (147)
T ss_dssp EEEEESS--CCSSCCTTSEEEEEEEE
T ss_pred EEEEEec--CCCCccCCCEEEEEEeh
Confidence 9998886 89999999999999953
No 8
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.83 E-value=4.9e-21 Score=163.43 Aligned_cols=127 Identities=24% Similarity=0.295 Sum_probs=84.6
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCC--EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAP--YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~--~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
..++++|+|||+|+||+.|+++|++.+.. ++++|+|+. ++ +. ..++++.++|.+++++++ ++|.+++
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~-~~-~~-~~~l~~~~eR~~~l~~~~-~~d~v~~------- 70 (132)
T 2b7l_A 2 KRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFN-QI-KH-KKSYYDYEQRKMMLESIR-YVDLVIP------- 70 (132)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHH-HH-TT-CCCSSCHHHHHHHHHTBT-TCCEEEE-------
T ss_pred eEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHH-hc-cC-CCCCCCHHHHHHHHHhcC-CCCEEEE-------
Confidence 36899999999999999999999998754 457887621 12 22 246889999999999887 4787664
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCc
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQ 262 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ 262 (380)
.+++++|++. +++++++.+|+|+||. |+++.|+++ .++.++++ + ..
T Consensus 71 ----~~~~~~~~~~-~~~~~~~~iv~G~D~~------~~~~~L~~~-----~~v~~i~~----~--------------~~ 116 (132)
T 2b7l_A 71 ----EKGWGQKEDD-VEKFDVDVFVMGHDWE------GEFDFLKDK-----CEVIYLKR----T--------------EG 116 (132)
T ss_dssp ----ECCGGGHHHH-HHHTTCCEEEECGGGT------TTTGGGTTT-----SEEEECSS----C--------------C-
T ss_pred ----CCChHHHHHH-HHHcCCCEEEECCCCc------CcHHHHHhC-----CEEEEECC----C--------------CC
Confidence 2677899986 6789999999999993 566666543 35767664 1 57
Q ss_pred cchHHHHHHHHcCC
Q 016934 263 VSSTRVRQALAMGD 276 (380)
Q Consensus 263 ISST~IR~~L~~Gd 276 (380)
||||+||++|++|.
T Consensus 117 iSST~IR~~i~~g~ 130 (132)
T 2b7l_A 117 ISTTKIKQELYGKD 130 (132)
T ss_dssp --------------
T ss_pred cCHHHHHHHHHhcC
Confidence 99999999999985
No 9
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=99.81 E-value=2.4e-21 Score=187.29 Aligned_cols=131 Identities=18% Similarity=0.115 Sum_probs=104.7
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEEEeecC-cccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYLLSFIG-MAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~~-P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
.+++++|+|||+|.||++||++|++.+..+|+||++ |..++.++. ...+.+.++|.++|+++| ||.++..+|
T Consensus 22 ~~V~~vgtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~G--VD~vf~p~~---- 95 (280)
T 2ejc_A 22 KTIGFVPTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKEN--VDCIFHPSV---- 95 (280)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTTT--CSEEECCCH----
T ss_pred CEEEEEcCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHCC--CCEEEeCCH----
Confidence 367889999999999999999999998888999997 888775432 233567889999999999 898887554
Q ss_pred cccCCCCHHHHHH--------H-HHHhhCccE------------EEEcC-CCCCCCCCCCCHHHHHHHHhhcCcEEEE--
Q 016934 183 SSVRHLSPQQFVE--------K-LSRELGVRG------------VVAGE-NYRFGYKAAGDASELVRLCEEYGMDACI-- 238 (380)
Q Consensus 183 a~i~~ls~e~Fie--------~-L~~~L~vk~------------IVVG~-DFrFG~~r~Gd~~~Lk~l~~~~G~~v~i-- 238 (380)
+ .|+|++|+. . |...+++.+ .+||. ||+||+|+.|+...|+++++++||+|++
T Consensus 96 ~---~m~p~~f~~~v~~~~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~~dl~~~v~iv~ 172 (280)
T 2ejc_A 96 E---EMYPPDFSTYVEETKLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMIE 172 (280)
T ss_dssp H---HHSCTTCCCCCCCCSGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTCCCEEEE
T ss_pred H---HCCCcCceEEEEcCCcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHHHHcCCeEEEEe
Confidence 3 377888852 2 334455555 56666 9999999999999999999999999986
Q ss_pred Ecceec
Q 016934 239 INSVMD 244 (380)
Q Consensus 239 V~~v~~ 244 (380)
+|.+..
T Consensus 173 vp~vr~ 178 (280)
T 2ejc_A 173 CPIVRE 178 (280)
T ss_dssp ECCCBC
T ss_pred eCcEEc
Confidence 777643
No 10
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.80 E-value=2.7e-20 Score=158.08 Aligned_cols=125 Identities=20% Similarity=0.288 Sum_probs=93.6
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCC--EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAP--YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~--~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
..++++|+|||+|+||+.|+++|++.+.. ++++|+| ...+ +. ..++++.++|.+++++++ ++|.++.
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~-~~~~-~~-~~~l~~~~eR~~~l~~~~-~~d~v~~------- 70 (129)
T 1coz_A 2 KKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE-FNLQ-KQ-KKAYHSYEHRKLILETIR-YVDEVIP------- 70 (129)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHH-HHHH-HT-CCCSSCHHHHHHHHTTBT-TCCEEEE-------
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCH-HHhc-CC-CCCCCCHHHHHHHHHhcC-CCCEEEe-------
Confidence 36799999999999999999999988754 4578875 1112 12 246889999999999887 4787652
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCc
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQ 262 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ 262 (380)
..++++|++. +++++++.+|+|+||. |+++.|+++ .++.++++ +..
T Consensus 71 ----~~~~~~~~~~-l~~~~~~~iv~G~D~~------~~~~~L~~~-----~~v~~~~~------------------~~~ 116 (129)
T 1coz_A 71 ----EKNWEQKKQD-IIDHNIDVFVMGDDWE------GKFDFLKDQ-----CEVVYLPR------------------TEG 116 (129)
T ss_dssp ----ECCSTTHHHH-HHHTTCSEEEEEGGGT------TTTGGGTTT-----SEEEEECC------------------CTT
T ss_pred ----CCCHHHHHHH-HHHhCCcEEEECCCCC------CcHHHHHhC-----CeEEEcCC------------------CCC
Confidence 2566789886 5788999999999993 566777553 35777764 156
Q ss_pred cchHHHHHHHHc
Q 016934 263 VSSTRVRQALAM 274 (380)
Q Consensus 263 ISST~IR~~L~~ 274 (380)
||||.||++|++
T Consensus 117 iSST~IR~~i~~ 128 (129)
T 1coz_A 117 ISTTKIKEEIAG 128 (129)
T ss_dssp CCHHHHHHTC--
T ss_pred cCHHHHHHHHHh
Confidence 999999998764
No 11
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.79 E-value=5.7e-20 Score=165.17 Aligned_cols=146 Identities=14% Similarity=0.013 Sum_probs=103.4
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhC-CC-EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIG-AP-YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g-~~-~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
..++++|+|||+|+||+.|+++|.+.. .. +++++.+ ...+ .+..++++.++|+++++..-.++|.+.+.+|+.++
T Consensus 3 ~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~-~~~~--k~~~~~~~~~~R~~ml~~~~~~~~~v~v~~~e~~~ 79 (189)
T 2qtr_A 3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQ-IPPH--KQGRNITSVESRLQMLELATEAEEHFSICLEELSR 79 (189)
T ss_dssp EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECS-SCTT--CTTSCCCCHHHHHHHHHHHHTTCTTEEECCTGGGS
T ss_pred eEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECC-CCCC--ccCCCCCCHHHHHHHHHHHhCCCCCEEEehHHhcC
Confidence 357999999999999999999998874 33 5455543 1111 11235789999999998751137889999998876
Q ss_pred cccCCCCHHHHHHHHHHhhCccE------EEEcCCCCCCCCCCCCHHHHHHHHh-----hcCc------EEEEEcceecc
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRG------VVAGENYRFGYKAAGDASELVRLCE-----EYGM------DACIINSVMDK 245 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~------IVVG~DFrFG~~r~Gd~~~Lk~l~~-----~~G~------~v~iV~~v~~~ 245 (380)
+. .+ |...+++.++.+. +|+|.|+.||..++++++.|.+++. +.|+ .+.+++
T Consensus 80 ~~---~~---~~~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~w~~~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~----- 148 (189)
T 2qtr_A 80 KG---PS---YTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVE----- 148 (189)
T ss_dssp CS---CC---CHHHHHHHHHHHCTTCEEEEEEEHHHHHHGGGSTTHHHHTTTCEEEEECCTTCCCCCSSCCEEEC-----
T ss_pred CC---CC---CHHHHHHHHHHHCCCCCEEEEEehhhhhhhhccCCHHHHHHhCCEEEEECCCCCccCCceEEEEc-----
Confidence 52 22 4433445666666 9999999999999999998877655 3333 222221
Q ss_pred CCCCCcccCCCCccCCccchHHHHHHHHcCC
Q 016934 246 HQDSRDIDCNDSKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 246 ~~~~~~~~~~~~~~~~~ISST~IR~~L~~Gd 276 (380)
.....||||.||++|++|+
T Consensus 149 ------------~~~~~iSST~IR~~l~~g~ 167 (189)
T 2qtr_A 149 ------------IPEFAVSSSLLRERYKEKK 167 (189)
T ss_dssp ------------CCCCCCCHHHHHHHHHTTC
T ss_pred ------------CCCCccCHHHHHHHHHcCC
Confidence 1135799999999999987
No 12
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=99.77 E-value=6.7e-21 Score=183.68 Aligned_cols=140 Identities=17% Similarity=0.171 Sum_probs=114.9
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEEEeecC-cccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYLLSFIG-MAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~~-P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
+.|+|+|+ +|.|||+||++|++.+..+|+||++ |..++.++. ...+.+.++|.++|+.+| +|.++..+|+
T Consensus 20 ~~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~G--vD~vf~p~f~--- 91 (276)
T 1v8f_A 20 GFVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAG--VDLLFAPGVE--- 91 (276)
T ss_dssp EEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTT--CSEEECCCHH---
T ss_pred eEEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhCC--CCEEEeCChH---
Confidence 57899999 9999999999999998778899998 988775442 234778899999999998 8988876665
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEcC----------------------C-CCCCCCCCCCHHHHHHHHhhcCcEEEEE
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAGE----------------------N-YRFGYKAAGDASELVRLCEEYGMDACII 239 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG~----------------------D-FrFG~~r~Gd~~~Lk~l~~~~G~~v~iV 239 (380)
.|+|++|+..+...++++.+++|+ | |+||+|+.|+...|+++++++||+++++
T Consensus 92 ----~m~p~~f~~~v~~~~~~~~vl~G~~RpghF~GV~TVv~kLf~iv~Pd~~~FG~kd~qq~~~l~~~~~dl~~~v~iv 167 (276)
T 1v8f_A 92 ----EMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVV 167 (276)
T ss_dssp ----HHSCTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHHTCCCEEE
T ss_pred ----hCCCcCCeEEEEecCCcceEEecCCCCCeecceeehhhHhhcccCCCEEEECCCCCcCHHHHHHHHHHcCCeEEEE
Confidence 388889876522146778888888 9 9999999999999999999999999999
Q ss_pred --cceeccCCCCCcccCCCCccCCccchHHHH
Q 016934 240 --NSVMDKHQDSRDIDCNDSKERGQVSSTRVR 269 (380)
Q Consensus 240 --~~v~~~~~~~~~~~~~~~~~~~~ISST~IR 269 (380)
|.+... ++..||||+||
T Consensus 168 ~~p~vr~~-------------dGlaiSSrnir 186 (276)
T 1v8f_A 168 GVPTVREE-------------DGLALSSRNVY 186 (276)
T ss_dssp EECCCBCT-------------TSCBCCGGGGG
T ss_pred ecCcEEcC-------------CCCEeEEeEEE
Confidence 887652 24678887764
No 13
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.77 E-value=1.4e-18 Score=154.03 Aligned_cols=137 Identities=14% Similarity=0.210 Sum_probs=97.9
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCC-EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAP-YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQFS 183 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~-~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~Fa 183 (380)
..++++|+|||+|+||+.|+++|.+.... .|+++.+|.+ .++++.++|.++++..-.++|.+.+.+|+ +
T Consensus 3 ~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p~k-------~~l~~~~~R~~ml~~a~~~~~~v~v~~~e-~-- 72 (169)
T 1o6b_A 3 SIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSK-------KPLFSVEERCELLREVTKDIPNITVETSQ-G-- 72 (169)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCCSS-------CCSSCHHHHHHHHHHHHTTCTTEEEEECS-S--
T ss_pred cEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCCcc-------CCCCCHHHHHHHHHHHHhcCCCEEEcccc-h--
Confidence 46799999999999999999999988754 3455654432 35789999999998732237888888875 1
Q ss_pred ccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCcc
Q 016934 184 SVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQV 263 (380)
Q Consensus 184 ~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~I 263 (380)
|....++.++++.+++|.|+.||..+.++...+.+... .|+++..+.+. . +...|
T Consensus 73 ---------~~~~~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~-~~~~~i~~~~~--~-------------~~~~I 127 (169)
T 1o6b_A 73 ---------LLIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLD-ESIETFFMMAN--N-------------QYSFL 127 (169)
T ss_dssp ---------CHHHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHC-TTSEEEEEECC--S-------------TTTTC
T ss_pred ---------HHHHHHHHcCCCEEEEcCccccchHHHHHHHHHhcccc-CCCCEEEEECC--C-------------CCCcC
Confidence 33334577899999999999998765544433332221 26776665431 1 12479
Q ss_pred chHHHHHHHHcCC
Q 016934 264 SSTRVRQALAMGD 276 (380)
Q Consensus 264 SST~IR~~L~~Gd 276 (380)
|||.||++|++|+
T Consensus 128 SST~IR~~l~~G~ 140 (169)
T 1o6b_A 128 SSSIVKEVARYDG 140 (169)
T ss_dssp CHHHHHHHHHTTC
T ss_pred cHHHHHHHHHcCC
Confidence 9999999999984
No 14
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.73 E-value=2.7e-17 Score=143.47 Aligned_cols=133 Identities=16% Similarity=0.164 Sum_probs=92.6
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCC--EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAP--YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~--~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
..++++|+||++|+||+.|+++|.+.... ++++|+| .+ .++++.++|.++++..-.++|.+.+.+|+.
T Consensus 2 ~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p-~k-------~~~~~~~~R~~ml~~a~~~~~~v~v~~~~~-- 71 (158)
T 1qjc_A 2 KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP-SK-------KPMFTLEERVALAQQATAHLGNVEVVGFSD-- 71 (158)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC-SS-------CCSSCHHHHHHHHHHHTTTCTTEEEEEECS--
T ss_pred CEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC-CC-------CCCCCHHHHHHHHHHHHhcCCCeEEcccch--
Confidence 36799999999999999999999987644 3466653 11 257899999999987212388888888761
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHH---hhcCcEEEEEcceeccCCCCCcccCCCCcc
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLC---EEYGMDACIINSVMDKHQDSRDIDCNDSKE 259 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~---~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~ 259 (380)
. ...++++++++.+++|.|+.++ ++.+.+++ +.++..+..+..+...+
T Consensus 72 -----~-----~~~~l~~l~~~~~v~G~d~~~~------~~~~~~~~~~~r~~~~~~~~i~~~~~~~------------- 122 (158)
T 1qjc_A 72 -----L-----MANFARNQHATVLIRGLRAVAD------FEYEMQLAHMNRHLMPELESVFLMPSKE------------- 122 (158)
T ss_dssp -----C-----HHHHHHHTTCCEEEEECCTTCC------HHHHHHHHHHHHHHCTTSEEEEECCCGG-------------
T ss_pred -----H-----HHHHHHHcCCCEEEEeccchhh------hHHHHHHHHhCccCCCCCCEEEEECCCC-------------
Confidence 1 1224567899999999998774 45554443 44433333333322211
Q ss_pred CCccchHHHHHHHHcCC
Q 016934 260 RGQVSSTRVRQALAMGD 276 (380)
Q Consensus 260 ~~~ISST~IR~~L~~Gd 276 (380)
...||||.||++|++|+
T Consensus 123 ~~~iSST~IR~~i~~g~ 139 (158)
T 1qjc_A 123 WSFISSSLVKEVARHQG 139 (158)
T ss_dssp GTTCCHHHHHHHHHTTC
T ss_pred CCccCHHHHHHHHHcCC
Confidence 14699999999999995
No 15
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.72 E-value=6.4e-17 Score=161.11 Aligned_cols=95 Identities=14% Similarity=0.062 Sum_probs=75.4
Q ss_pred CceEEEEeecCccCHHHHHHHHHHHHhCCC-EEEeecCccc-ccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccc
Q 016934 104 AGGIVALGKFDALHIGHRELAIQASKIGAP-YLLSFIGMAE-VFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQ 181 (380)
Q Consensus 104 ~~~vvtIG~FDGvHlGHq~LI~~A~~~g~~-~VvtF~~P~~-vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~ 181 (380)
.++|+|||+|||+|+|||.||++|++.+.. +|+|. +.. +. .+.+.+++..+|.+++..+| +|.++.+||+
T Consensus 52 ~~~v~~lG~FDg~H~GHq~lI~~a~~~~~~~~Vms~--~~~~vq--rg~~~l~~~~~R~~~~~~~G--vD~vielpF~-- 123 (357)
T 3gmi_A 52 DKIVCDFTEYNPLHKGHKYALEKGKEHGIFISVLPG--PLERSG--RGIPYFLNRYIRAEMAIRAG--ADIVVEGPPM-- 123 (357)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHHHHTSSEEEEEECC--TTSBCT--TSSBCSSCHHHHHHHHHHHT--CSEEEECCCG--
T ss_pred CCEEEEEEecCccCHHHHHHHHHHHHcCCeEEEEcC--chHHhc--CCCCcCCCHHHHHHHHHHCC--CCEEEEcCch--
Confidence 458999999999999999999999983322 23332 111 22 22345789999999999998 9999999996
Q ss_pred ccccCCCCHHHHHHH---HHHhhCccEEEEcC
Q 016934 182 FSSVRHLSPQQFVEK---LSRELGVRGVVAGE 210 (380)
Q Consensus 182 Fa~i~~ls~e~Fie~---L~~~L~vk~IVVG~ 210 (380)
++ ++|++|++. ++..|+++.||+|+
T Consensus 124 ~~----~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 124 GI----MGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp GG----SCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hh----CCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 44 999999986 78899999999998
No 16
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=99.71 E-value=6.4e-19 Score=170.38 Aligned_cols=127 Identities=17% Similarity=0.119 Sum_probs=105.6
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCEEEeecC-cccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEecccccc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPYLLSFIG-MAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQFS 183 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~~-P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~Fa 183 (380)
-|.|+|+ +|.|||+||++|++.+..+|+||++ |..++.++. ...+.+.+++.++|+.+| +|.++..+| +
T Consensus 27 fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~G--vD~vf~p~~----~ 97 (283)
T 3ag6_A 27 FIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVG--ADIVFHPAV----E 97 (283)
T ss_dssp EEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHHT--CSEEECCCH----H
T ss_pred EEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhCC--CCEEEeCCH----H
Confidence 4679997 9999999999999988778899998 988876542 234678899999999999 898877554 3
Q ss_pred ccCCCCHHHHHHH---------HHHhhCcc-------------EEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEE--E
Q 016934 184 SVRHLSPQQFVEK---------LSRELGVR-------------GVVAGENYRFGYKAAGDASELVRLCEEYGMDACI--I 239 (380)
Q Consensus 184 ~i~~ls~e~Fie~---------L~~~L~vk-------------~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~i--V 239 (380)
.|+|++|+.. |...+++. .+|.|+||+||+|+.++...|+++++++||+|.+ +
T Consensus 98 ---~myp~~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~qql~~l~~m~~dl~~~V~iv~v 174 (283)
T 3ag6_A 98 ---DMYPGELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGI 174 (283)
T ss_dssp ---HHSCSSCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ---HCCCCCceEEEeccccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCccCHHHHHHHHHHcCCeEEEEec
Confidence 3788888432 34458999 8999999999999999999999999999999988 7
Q ss_pred cceec
Q 016934 240 NSVMD 244 (380)
Q Consensus 240 ~~v~~ 244 (380)
|.+..
T Consensus 175 p~vr~ 179 (283)
T 3ag6_A 175 DIVRE 179 (283)
T ss_dssp CCCBC
T ss_pred CcEEe
Confidence 87764
No 17
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.71 E-value=1.1e-16 Score=139.94 Aligned_cols=133 Identities=19% Similarity=0.204 Sum_probs=93.6
Q ss_pred EEEEeecCccCHHHHHHHHHHHHhCCC--EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccccc
Q 016934 107 IVALGKFDALHIGHRELAIQASKIGAP--YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQFSS 184 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~g~~--~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~Fa~ 184 (380)
++++|+||++|+||+.|+++|.+.... ++++++ |.+ +..++++.++|.++++..-.++|.+.+.+|+.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~-p~k-----~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~---- 72 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLEN-PSK-----RGQYLFSAEERLAIIREATAHLANVEAATFSG---- 72 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC-----------CCSSCHHHHHHHHHHHTTTCTTEEEEEECS----
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCC-CCC-----CCCCCCCHHHHHHHHHHHhcCCCCEEEEecCc----
Confidence 689999999999999999999987644 345533 321 11257899999999987422378888888751
Q ss_pred cCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHH---HhhcCcEEEEEcceeccCCCCCcccCCCCccCC
Q 016934 185 VRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRL---CEEYGMDACIINSVMDKHQDSRDIDCNDSKERG 261 (380)
Q Consensus 185 i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l---~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~ 261 (380)
|+..++++++++.+++|.| +++|++.+.++ .+..+.++..+..+... ...
T Consensus 73 --------~~~~~l~~l~~~~~v~G~d------~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~-------------~~~ 125 (160)
T 1od6_A 73 --------LLVDFVRRVGAQAIVKGLR------AVSDYEYELQMAHLNRQLYPGLETLFILAAT-------------RYS 125 (160)
T ss_dssp --------CHHHHHHHTTCSEEEEEEC------TTSCHHHHHHHHHHHHHHTTTCEEEEEECCG-------------GGT
T ss_pred --------hHHHHHHHcCCCEEEEeCC------cccchHHHHHHHHhCcCCCCCCCEEEEeCCC-------------CCC
Confidence 3444567889999999977 68899988865 55553333333322211 124
Q ss_pred ccchHHHHHHHHcCC
Q 016934 262 QVSSTRVRQALAMGD 276 (380)
Q Consensus 262 ~ISST~IR~~L~~Gd 276 (380)
.||||.||++|++|+
T Consensus 126 ~ISST~IR~~l~~G~ 140 (160)
T 1od6_A 126 FVSSTMVKEIARYGG 140 (160)
T ss_dssp TCCHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHcCC
Confidence 799999999999986
No 18
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.67 E-value=6e-17 Score=152.86 Aligned_cols=145 Identities=15% Similarity=0.145 Sum_probs=100.5
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh--CCC--EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEE-Eecc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI--GAP--YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAP-VEFQ 179 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~--g~~--~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~-~~F~ 179 (380)
..|++.|+||++|.||+.+|++|++. +.. +.|++++ .+... ...|+++.++|.++++.++ +||.|++ .+|+
T Consensus 77 ~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~--~v~~~-Kg~pi~s~eER~e~v~~~k-~VD~Vvv~~p~~ 152 (236)
T 3hl4_A 77 VRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDE--LTHNF-KGFTVMNENERYDAVQHCR-YVDEVVRNAPWT 152 (236)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHH--HHHHH-TCCCSSCHHHHHHHHHTBT-TCSEEESSCCSS
T ss_pred eEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccH--HHhhc-CCCCCCCHHHHHHHHHHhC-CCCeEEECCcCc
Confidence 36899999999999999999999998 433 3366663 11111 1247999999999999986 6998876 2332
Q ss_pred ccccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCcc
Q 016934 180 IQFSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKE 259 (380)
Q Consensus 180 ~~Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~ 259 (380)
++ .+|+ ++++++.||.|.|+.++.++.+.++.|++. |.. ..++..
T Consensus 153 --------l~-~d~i----~~~~~d~Vv~GDd~~~~~~~~d~y~~lk~~----G~~-~~v~rt----------------- 197 (236)
T 3hl4_A 153 --------LT-PEFL----AEHRIDFVAHDDIPYSSAGSDDVYKHIKEA----GMF-APTQRT----------------- 197 (236)
T ss_dssp --------CC-HHHH----HHTTCCEEEEESSCCCCSSCSCTTHHHHHT----TCE-EEECCC-----------------
T ss_pred --------Cc-HHHH----HHcCCCEEEECCccccCCCchhHHHHHHhC----CeE-EEeccC-----------------
Confidence 22 3555 467999999999999998887777888765 443 344431
Q ss_pred CCccchHHHHHHHHcCCchhhhhhcceeee
Q 016934 260 RGQVSSTRVRQALAMGDMKYVSELLGRQHR 289 (380)
Q Consensus 260 ~~~ISST~IR~~L~~GdI~~An~LLGrpy~ 289 (380)
..||||.|++.|..+....|+++|+|.|+
T Consensus 198 -~giSTT~Ii~RI~~~~~~y~~R~l~rg~~ 226 (236)
T 3hl4_A 198 -EGISTSDIITRIVRDYDVYARRNLQRGYT 226 (236)
T ss_dssp -TTCCHHHHHHHHHHHHHC-----------
T ss_pred -CCCCHHHHHHHHHHhHHHHHHHHhcCCCC
Confidence 35999999999999999999999999887
No 19
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=99.63 E-value=4.7e-18 Score=165.56 Aligned_cols=126 Identities=16% Similarity=0.157 Sum_probs=101.9
Q ss_pred eEEEEeecCccCHHHHHHHHHHHH-hCCCEEEeecC-cccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 106 GIVALGKFDALHIGHRELAIQASK-IGAPYLLSFIG-MAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~-~g~~~VvtF~~-P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
.|.|+|+ +|.||++||++|++ .+..+|+||++ |..++..+. ...+.+.+++.++|+.+| ||.++..+|+
T Consensus 37 ~VpTmG~---LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~G--VD~vf~p~~~--- 108 (301)
T 3cov_A 37 LVPTMGA---LHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEG--VEIAFTPTTA--- 108 (301)
T ss_dssp EEEECSC---CCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHTT--CCEEECCCHH---
T ss_pred EEecCCc---ccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhCC--CCEEEeCCHH---
Confidence 4555665 99999999999999 88668899997 988775431 134678899999999999 8987765543
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEcC-----------------------CCCCCCCCCCCHHHHHHHHhhcCcEEEE-
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAGE-----------------------NYRFGYKAAGDASELVRLCEEYGMDACI- 238 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG~-----------------------DFrFG~~r~Gd~~~Lk~l~~~~G~~v~i- 238 (380)
.|.|++|+..+... +++.+++|. ||+||+|+.++...|+++++.+||+|++
T Consensus 109 ----~myP~~f~~~v~~~-~~~~vl~G~~RPghF~GV~TVV~KLfniv~P~~a~FG~Kd~qql~~lr~mv~dl~~~V~iv 183 (301)
T 3cov_A 109 ----AMYPDGLRTTVQPG-PLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVV 183 (301)
T ss_dssp ----HHCTTCSCSEEECC-GGGGSGGGSSCTTHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHHTTCCCEEE
T ss_pred ----HCCCCCceEEEecC-CcceeeecCCCCChhhhhhHHHHHHhhccCCCeEEECCCcccCHHHHHHHHHHcCCeEEEE
Confidence 38888888653222 678889999 9999999999999999999999999988
Q ss_pred -Ecceec
Q 016934 239 -INSVMD 244 (380)
Q Consensus 239 -V~~v~~ 244 (380)
+|.+..
T Consensus 184 ~vp~vRe 190 (301)
T 3cov_A 184 GVPTVRE 190 (301)
T ss_dssp EECCCBC
T ss_pred eeCcEEe
Confidence 788764
No 20
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.62 E-value=6.6e-16 Score=140.02 Aligned_cols=159 Identities=13% Similarity=-0.021 Sum_probs=93.4
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhC--CCEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIG--APYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQI 180 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g--~~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~ 180 (380)
..++++|+||++|+||+.|+++|++.. ..++ +++++|.+ +..++++.++|.++++..-.++|.+.+.+|+.
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~k-----~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~ 82 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHK-----QNEDYTDSFHRVEMLKLAIQSNPSFKLELVEM 82 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC--------------CHHHHHHHHHHHHTTCTTEEECCGGG
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCCCc-----CCcCCCCHHHHHHHHHHHHcCCCCeEEeHHHh
Confidence 468999999999999999999998874 3333 35554421 12357899999999986522378888888887
Q ss_pred cccccCCCCHHHHHHHHHHhhCcc--EEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCc
Q 016934 181 QFSSVRHLSPQQFVEKLSRELGVR--GVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSK 258 (380)
Q Consensus 181 ~Fa~i~~ls~e~Fie~L~~~L~vk--~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~ 258 (380)
+++. .--..+.++.+...+.-. .+|+|.|+.++-..+.+.+.|.+. +.+.+++.-.....-+..-. ..+.
T Consensus 83 ~~~~--~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~W~~~e~i~~~-----~~~~v~~R~g~~~~l~~~i~-~~~~ 154 (194)
T 1kam_A 83 EREG--PSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNL-----IQFIGVKRPGFHVETPYPLL-FADV 154 (194)
T ss_dssp STTC--CCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCCCCHHHHHHHHH-----SEEEEEECSSCCCCCSSCCE-EEEC
T ss_pred cCCC--CCChHHHHHHHHHHCCCCcEEEEEecchhhhhccccCHHHHHHh-----CcEEEEECCCcchhcCCCEE-EeCC
Confidence 6542 111123344332222111 999999999998877766655443 23334433111000000000 0000
Q ss_pred cCCccchHHHHHHHHcCC
Q 016934 259 ERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 259 ~~~~ISST~IR~~L~~Gd 276 (380)
....||||.||++|++|+
T Consensus 155 ~~~~ISST~IR~~i~~g~ 172 (194)
T 1kam_A 155 PEFEVSSTMIRERFKSKK 172 (194)
T ss_dssp CCBCCCHHHHHHHHHHTC
T ss_pred CCCCcCHHHHHHHHHcCC
Confidence 124799999999999986
No 21
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.62 E-value=4.9e-16 Score=139.78 Aligned_cols=132 Identities=15% Similarity=0.084 Sum_probs=93.0
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCEE--E-eecCcccccccCCCCCCCChHHHHHHHHhcCCcc----CeEEEEec
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPYL--L-SFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYC----GNVAPVEF 178 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~V--v-tF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~v----D~vv~~~F 178 (380)
.++++|+|||+|+||+.|+++|.+....++ + ++++|.+ ..++++.++|.++++....+. |.+.+++|
T Consensus 5 ~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~p~~------~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~ 78 (181)
T 1ej2_A 5 RGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQLSHS------IRDPFTAGERVMMLTKALSENGIPASRYYIIPV 78 (181)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTCCSS------SSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred EEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCCCcC------CCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEec
Confidence 579999999999999999999988754432 3 4443322 134678999999988754223 57788888
Q ss_pred cccccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCc
Q 016934 179 QIQFSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSK 258 (380)
Q Consensus 179 ~~~Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~ 258 (380)
+..+. ..+..+|++.+.. .++.+++|.|+ +++++...|+++..++.. +
T Consensus 79 d~~~~---~~~w~~~~~~l~~--~~~~~v~gr~~------------~~~~~~~~~i~~~~~~~~--~------------- 126 (181)
T 1ej2_A 79 QDIEC---NALWVGHIKMLTP--PFDRVYSGNPL------------VQRLFSEDGYEVTAPPLF--Y------------- 126 (181)
T ss_dssp CCCSC---HHHHHHHHHHHSC--CCSEEECCCHH------------HHHHHHHTTCCEECCCCS--S-------------
T ss_pred CccCC---HHHHHHHHHHHCC--CCCEEEECCHH------------HHHHHHhCCeEEEecCCC--c-------------
Confidence 75443 2345566655432 67779999775 455666678887766542 1
Q ss_pred cCCccchHHHHHHHHcCC
Q 016934 259 ERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 259 ~~~~ISST~IR~~L~~Gd 276 (380)
+..||||.||+++++|+
T Consensus 127 -~~~ISST~IR~~l~~G~ 143 (181)
T 1ej2_A 127 -RDRYSGTEVRRRMLDDG 143 (181)
T ss_dssp -TTTSSHHHHHHHHHHTC
T ss_pred -cCcCcHHHHHHHHHcCC
Confidence 25799999999999885
No 22
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.61 E-value=2.2e-15 Score=149.32 Aligned_cols=132 Identities=14% Similarity=0.146 Sum_probs=98.6
Q ss_pred CceEEEEeecCccCHHHHHHHHHHHHhCCC--EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccc
Q 016934 104 AGGIVALGKFDALHIGHRELAIQASKIGAP--YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQ 181 (380)
Q Consensus 104 ~~~vvtIG~FDGvHlGHq~LI~~A~~~g~~--~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~ 181 (380)
...|++.|+||++|.||+.+|++|++.+.. +.+++++. +.... ..|+++.++|.++|++++ +||.|+ +|+.
T Consensus 7 ~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~--v~~~K-~~pi~s~eER~~~l~~l~-~VD~Vv--~f~~- 79 (341)
T 3elb_A 7 AVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEE--IAKHK-GPPVFTQEERYKMVQAIK-WVDEVV--PAAP- 79 (341)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHH--HHHHS-SCCSSCHHHHHHHHHHBT-TCCEEE--ETCC-
T ss_pred ceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHH--HhccC-CCCCCCHHHHHHHHHHcC-CCCEEE--ecCC-
Confidence 347899999999999999999999999865 33677641 11111 248999999999999995 499877 4543
Q ss_pred ccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCC
Q 016934 182 FSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERG 261 (380)
Q Consensus 182 Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~ 261 (380)
.+++++|++ +++++.+|.|.||+||.+..-.++.+++ +-++..++.. .
T Consensus 80 -----~~~~~efi~----~~~~d~vV~G~D~~~g~~~~~~~~~~k~-----~G~~~~~~~t------------------~ 127 (341)
T 3elb_A 80 -----YVTTLETLD----KYNCDFCVHGNDITLTVDGRDTYEEVKQ-----AGRYRECKRT------------------Q 127 (341)
T ss_dssp -----SSCCHHHHH----HTTCSEEEECSCCCBCTTSCBTTHHHHH-----TTCEEECCCC------------------T
T ss_pred -----CCCHHHHHH----HhCCCEEEECCCCCCCCCCcchHHHHHh-----CCEEEEeCCC------------------C
Confidence 257889874 6899999999999999765544555543 2356666542 3
Q ss_pred ccchHHHHHHHHc
Q 016934 262 QVSSTRVRQALAM 274 (380)
Q Consensus 262 ~ISST~IR~~L~~ 274 (380)
.+|||.|.+.|..
T Consensus 128 g~STT~ii~ri~~ 140 (341)
T 3elb_A 128 GVSTTDLVGRMLL 140 (341)
T ss_dssp TCCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHH
Confidence 5999999888765
No 23
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.58 E-value=4.1e-15 Score=143.47 Aligned_cols=138 Identities=16% Similarity=0.053 Sum_probs=99.8
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCC--EEEeecC-cccccccCCCCCCCChHHHHHHHHhcCCcc--CeEEEEecc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAP--YLLSFIG-MAEVFGWEPRAPIVAKCDRKRVLSSWAPYC--GNVAPVEFQ 179 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~--~VvtF~~-P~~vl~~~~~~~l~s~~~R~~lL~~lg~~v--D~vv~~~F~ 179 (380)
..++++|+||++|+||+.|+++|.+.... +++++.+ |.+ ...+++.++|+++++....+. +.+.+++|+
T Consensus 8 ~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~p~~------~~~~~~~~~R~~m~~~~~~~~~~~~~~~i~~~ 81 (341)
T 2qjo_A 8 QYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVAAD------TRNPWRSPERMAMIEACLSPQILKRVHFLTVR 81 (341)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETCCCC------SSSCSCHHHHHHHHHTTSCHHHHTTEEEEEEE
T ss_pred eEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCcccCCC------CCCCCCHHHHHHHHHHHhhhccCCeEEEEECC
Confidence 47899999999999999999999987543 3477775 432 123478899999999876433 458888988
Q ss_pred ccccccCCCCHHHHHHHHHHhhC---ccEEEEcCCCCCCCCCCCCHHHHHHHHhhc-CcEEEEEcceeccCCCCCcccCC
Q 016934 180 IQFSSVRHLSPQQFVEKLSRELG---VRGVVAGENYRFGYKAAGDASELVRLCEEY-GMDACIINSVMDKHQDSRDIDCN 255 (380)
Q Consensus 180 ~~Fa~i~~ls~e~Fie~L~~~L~---vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~-G~~v~iV~~v~~~~~~~~~~~~~ 255 (380)
..+.. ..+..+|++.+++.+. ++.+++|+|+.. +..+.+.+ ++++..++ .
T Consensus 82 d~~~~--~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~~----~---------- 135 (341)
T 2qjo_A 82 DWLYS--DNLWLAAVQQQVLKITGGSNSVVVLGHRKDA----------SSYYLNLFPQWDYLETG----H---------- 135 (341)
T ss_dssp CCTTC--HHHHHHHHHHHHHHHHTTCSCEEEEECCCSG----------GGGGGGSCTTSEEEECC----C----------
T ss_pred CCcCC--hHHHHHHHHHHhHHhcCCCceEEEEcCCCCC----------ChHHHHhccccceeecc----c----------
Confidence 76322 3577888876777664 789999998731 12233444 67766554 1
Q ss_pred CCccCCccchHHHHHHHHcCCch
Q 016934 256 DSKERGQVSSTRVRQALAMGDMK 278 (380)
Q Consensus 256 ~~~~~~~ISST~IR~~L~~GdI~ 278 (380)
...||||.||++|++|+..
T Consensus 136 ----~~~iSST~IR~~l~~g~~~ 154 (341)
T 2qjo_A 136 ----YPDFSSTAIRGAYFEGKEG 154 (341)
T ss_dssp ----CTTCCHHHHHHHHHHTCGG
T ss_pred ----CCCCCcHHHHHHHHcCCCc
Confidence 2579999999999999853
No 24
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.57 E-value=1.3e-14 Score=132.63 Aligned_cols=130 Identities=22% Similarity=0.312 Sum_probs=90.4
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
..+++.|+||++|+||+.|+++|++.+..++ ++. +|. ..++++.++|.++++..-.++|.+.+.+|+.
T Consensus 23 ki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~-~p~-------K~~l~s~eeR~~ml~~~~~~v~~v~v~~f~~-- 92 (187)
T 3k9w_A 23 VVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVAD-SRA-------KKPFFSLEERLKIANEVLGHYPNVKVMGFTG-- 92 (187)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEEC-CGG-------GCCSSCHHHHHHHHHHHHTTCTTEEEEEESS--
T ss_pred EEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEec-CCc-------cCCCCCHHHHHHHHHHHhccCCcEEEEechh--
Confidence 4789999999999999999999999876543 332 221 1368899999999998512389998888852
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEc----CCCCCCCCCCCCHHHHHHHHhhc--CcEEEEEcceeccCCCCCcccCCC
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAG----ENYRFGYKAAGDASELVRLCEEY--GMDACIINSVMDKHQDSRDIDCND 256 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG----~DFrFG~~r~Gd~~~Lk~l~~~~--G~~v~iV~~v~~~~~~~~~~~~~~ 256 (380)
++ .+| +++++++.+|+| .||.|.. .+..+-+++ ++++..+.+..
T Consensus 93 -----~~-~d~----l~~l~~~~iv~G~r~~~Df~~E~-------~la~~nr~l~~~ietv~l~~~~------------- 142 (187)
T 3k9w_A 93 -----LL-KDF----VRANDARVIVRGLRAVSDFEYEF-------QMAGMNRYLLPDVETMFMTPSD------------- 142 (187)
T ss_dssp -----CH-HHH----HHHTTCSEEEEECCTTSCHHHHH-------HHHHHHHHHCTTCEEEEECCCG-------------
T ss_pred -----hH-HHH----HHHcCCCEEEECCCcccccchHH-------HHHHHHHHhCCCCcEEEEeccc-------------
Confidence 21 233 456899999999 8887543 122333333 45554443211
Q ss_pred CccCCccchHHHHHHHHcCC
Q 016934 257 SKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 257 ~~~~~~ISST~IR~~L~~Gd 276 (380)
+...||||.||+.++.|.
T Consensus 143 --~~~~ISST~IRe~~~~g~ 160 (187)
T 3k9w_A 143 --QYQFISGTIVREIAQLGG 160 (187)
T ss_dssp --GGTTCCHHHHHHHHHTTC
T ss_pred --ccccccHHHHHHHHHcCC
Confidence 124799999999999875
No 25
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.55 E-value=1.5e-14 Score=132.95 Aligned_cols=115 Identities=15% Similarity=0.121 Sum_probs=84.7
Q ss_pred EEEEeecCccCHHHHHHHHHHHHhC-C-CEEEeecC-cccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccccc
Q 016934 107 IVALGKFDALHIGHRELAIQASKIG-A-PYLLSFIG-MAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQFS 183 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~g-~-~~VvtF~~-P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~Fa 183 (380)
+++.|+||++|.||+.|+++|.+.. . .+++ .+ |...+ ...++++.++|.++++..-.+++.+.+.+|+.+++
T Consensus 6 ~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~--~~~~~~~~---k~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~ 80 (213)
T 1k4m_A 6 ALFGGTFDPVHYGHLKPVETLANLIGLTRVTI--IPNNVPPH---RPQPEANSVQRKHMLELAIADKPLFTLDERELKRN 80 (213)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHTCSCEEE--EECSSCTT---SCCCSSCHHHHHHHHHHHHTTCTTEEECCHHHHCS
T ss_pred EEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEE--EECCCCCC---CCCCCCCHHHHHHHHHHHhccCCCEEEeHHHhcCC
Confidence 7899999999999999999998763 3 3432 22 21111 11247899999999986522378889999987766
Q ss_pred ccCCCCH-HHHHHHHHHhhCcc---EEEEcCCCCCCCCCCCCHHHHHHHH
Q 016934 184 SVRHLSP-QQFVEKLSRELGVR---GVVAGENYRFGYKAAGDASELVRLC 229 (380)
Q Consensus 184 ~i~~ls~-e~Fie~L~~~L~vk---~IVVG~DFrFG~~r~Gd~~~Lk~l~ 229 (380)
..++ .+|++.+.+.++++ .+|+|.|+...-..+.+.+.|-+++
T Consensus 81 ---~~s~t~~~l~~l~~~~~~~~~~~~i~G~D~~~~l~~W~~~~~i~~~~ 127 (213)
T 1k4m_A 81 ---APSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNA 127 (213)
T ss_dssp ---SCCCHHHHHHHHHHHHCTTSCEEEEEEHHHHHHGGGSTTHHHHHHHC
T ss_pred ---CCCcHHHHHHHHHHHhCCCCcEEEEEehhhhhhhhccCCHHHHHhhC
Confidence 4666 79999888888998 9999999876666666666665543
No 26
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.27 E-value=1.2e-11 Score=111.49 Aligned_cols=160 Identities=13% Similarity=0.102 Sum_probs=91.3
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh-CCCEEEeecC-cccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI-GAPYLLSFIG-MAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~-g~~~VvtF~~-P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
..+++.|+||++|+||+.|+++|.+. +...|+ |.+ |...+ .+..++++.++|.++++..-.+.+.+.+.+|+.+.
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~-~~~~~~~~~--k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~~ 79 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFY-FLPSFMSPL--KKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKR 79 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEE-EEECSBCTT--SCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEE-EEECCCCCC--CcCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhcC
Confidence 35789999999999999999999876 434332 333 32222 11245788999999987531124555555554321
Q ss_pred cccCCCCHHHHHHHHHHhhCcc---EEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCcc
Q 016934 183 SSVRHLSPQQFVEKLSRELGVR---GVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKE 259 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk---~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~ 259 (380)
.. ..-..++++.+.+.+ +. .+|+|.|.-.....+.+.+.|.+. +.+.+++.-..... ....-...+..
T Consensus 80 ~~--~syt~dtl~~l~~~~-p~~~~~~i~G~D~~~~~~~W~~~~~i~~~-----~~~~v~~R~~~~~~-~~~~i~~~~~~ 150 (189)
T 2h29_A 80 GG--QSYTYDTIKAFKEQH-KDSELYFVIGTDQYNQLEKWYQIEYLKEM-----VTFVVVNRDKNSQN-VENAMIAIQIP 150 (189)
T ss_dssp CS--BCCHHHHHHHHHHHS-TTEEEEEEEEHHHHTTGGGSTTHHHHHHH-----CEEEEECCSSSCCC-CCTTSEEECCC
T ss_pred CC--CCCHHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCHHHHHhh-----CcEEEEECCCCccc-cCCcEEEEcCC
Confidence 10 011234566554443 33 899999976555667777655433 33445544211000 00000000011
Q ss_pred CCccchHHHHHHHHcCC
Q 016934 260 RGQVSSTRVRQALAMGD 276 (380)
Q Consensus 260 ~~~ISST~IR~~L~~Gd 276 (380)
...||||.||+.++.|+
T Consensus 151 ~~~ISST~IR~~i~~g~ 167 (189)
T 2h29_A 151 RVDISSTMIRQRVSEGK 167 (189)
T ss_dssp CBCCCHHHHHHHHHTTC
T ss_pred CCccCHHHHHHHHHcCC
Confidence 25699999999999885
No 27
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.24 E-value=1.5e-12 Score=114.61 Aligned_cols=132 Identities=19% Similarity=0.221 Sum_probs=88.4
Q ss_pred EEEEeecCccCHHHHHHHHHHHHhCC-CE--EEeecCcccccccCCCCCCCChHHHHHHHHhcC-CccC-eEEEEecccc
Q 016934 107 IVALGKFDALHIGHRELAIQASKIGA-PY--LLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWA-PYCG-NVAPVEFQIQ 181 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~g~-~~--VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg-~~vD-~vv~~~F~~~ 181 (380)
++..|.||.+|.||..|+++|.+.+. .+ +++.++|.+ +...++.+.++|.++++..- ...+ .+.+.+.+..
T Consensus 3 ~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~----k~~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~ 78 (148)
T 3do8_A 3 VALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMAR----ARIRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNP 78 (148)
T ss_dssp EEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHH----HHSCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECST
T ss_pred EEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCcccc----ccCCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCC
Confidence 68899999999999999999998763 43 356555421 01246788999998866531 1112 3444454443
Q ss_pred ccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCc---EEEEEcceeccCCCCCcccCCCCc
Q 016934 182 FSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGM---DACIINSVMDKHQDSRDIDCNDSK 258 (380)
Q Consensus 182 Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~---~v~iV~~v~~~~~~~~~~~~~~~~ 258 (380)
|.. .. .-.++.|||+.+=.. +.+.|+++++++|| +|.+++.+...
T Consensus 79 ~g~-----~~--------~~~~d~ivvs~Et~~------~~~~l~~~~~~~G~~~l~V~~v~~~~~~------------- 126 (148)
T 3do8_A 79 YGK-----TL--------DVDFEYLVVSPETYE------MALKINQKREELGKRKITIVKVDWMMAE------------- 126 (148)
T ss_dssp TTT-----TT--------TSCCSEEEECTTTHH------HHHHHHHHHHHHTCCCCEEEEEECCC---------------
T ss_pred CCC-----CC--------CCCCCEEEEChhhcc------cHHHHHHHHHHcCCCeeEEEEeccEEcC-------------
Confidence 321 11 236799999988653 57999999999999 99999987641
Q ss_pred cCCccchHHHHHHHHc
Q 016934 259 ERGQVSSTRVRQALAM 274 (380)
Q Consensus 259 ~~~~ISST~IR~~L~~ 274 (380)
++.+||||+||+.+..
T Consensus 127 ~~~~iSST~IR~~~id 142 (148)
T 3do8_A 127 DGKPISSTRIKRGEID 142 (148)
T ss_dssp -----CCCCCCCSCCC
T ss_pred CCCEEEHHHHHHHHHh
Confidence 1479999999987643
No 28
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.21 E-value=6.3e-11 Score=105.71 Aligned_cols=129 Identities=16% Similarity=0.217 Sum_probs=84.8
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
..+++.|.||.+|.||+.++++|++.+..++ ++. +|. ..++++.++|.++++..... |.+.+.+|+.
T Consensus 6 ~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~-~~~-------K~~~~~~~~R~~m~~~~~~~-~~v~V~~~~~-- 74 (162)
T 4f3r_A 6 PIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAP-TSR-------KDPHLKLEERVNLIADVLTD-ERVEVLPLTG-- 74 (162)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECC-C-------------CCHHHHHHHHHHHCCC-TTEEEEECCS--
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEec-CCc-------cCCCCCHHHHHHHHHHhhCC-CCEEEEeccc--
Confidence 4689999999999999999999999876543 332 221 14688999999999886544 7777777652
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEc----CCCCCCCCCCCCHHHHHHHHhhc--CcEEEEEcceeccCCCCCcccCCC
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAG----ENYRFGYKAAGDASELVRLCEEY--GMDACIINSVMDKHQDSRDIDCND 256 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG----~DFrFG~~r~Gd~~~Lk~l~~~~--G~~v~iV~~v~~~~~~~~~~~~~~ 256 (380)
+ ..+|+ ++++++.+|.| .||.+. ..+..+-+++ ++++..+..-.
T Consensus 75 -----l-~~~~~----~~~~~~~~v~G~r~~~Df~~e-------~~~a~~nr~l~~~ietv~l~~~~------------- 124 (162)
T 4f3r_A 75 -----L-LVDFA----KTHQANFILRGLRAVSDFDYE-------FQLAHMNYQLSPEIETIFLPARE------------- 124 (162)
T ss_dssp -----C-HHHHH----HHTTCCEEEEEECSHHHHHHH-------HHHHHHHHHHCTTCEEEEEECCG-------------
T ss_pred -----h-HHHHH----HHcCCCEEEECCCchhhhhhH-------HHHHHHHHHhCCCccEEEEECCc-------------
Confidence 2 23444 56799999999 666421 1122232333 45554443211
Q ss_pred CccCCccchHHHHHHHHcCC
Q 016934 257 SKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 257 ~~~~~~ISST~IR~~L~~Gd 276 (380)
+...||||.||+.++.|.
T Consensus 125 --~~~~ISST~IRe~~~~g~ 142 (162)
T 4f3r_A 125 --GYSYVSGTMVREIVTLGG 142 (162)
T ss_dssp --GGSSCCHHHHHHHHHTTC
T ss_pred --ccccccHHHHHHHHHcCC
Confidence 124799999999999874
No 29
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.20 E-value=6.9e-11 Score=104.86 Aligned_cols=131 Identities=16% Similarity=0.168 Sum_probs=76.0
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCE-E-E-eecCcccccccCCCCCCCChHHHHHHHHhcCCccC-eEEEEecccc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPY-L-L-SFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCG-NVAPVEFQIQ 181 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~-V-v-tF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD-~vv~~~F~~~ 181 (380)
.++++|+||++|.||+.|+++|.+....+ + + ++++|.+ ..++++.++|.++++..-.+.+ .+.+..++.
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~p~~------~~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~- 74 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQKSHT------LENPFTAGERILMITQSLKDYDLTYYPIPIKD- 74 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTCCSS------SSCCSCHHHHHHHHHHHHTTSSCEEEEEECCC-
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCCCCC------CCCCCCHHHHHHHHHHHHhcCCCceEEEeeCC-
Confidence 36899999999999999999998875443 2 3 5544322 1235688999999886432344 555555432
Q ss_pred ccccCCCCHHHHHHHHHHh-hCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccC
Q 016934 182 FSSVRHLSPQQFVEKLSRE-LGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKER 260 (380)
Q Consensus 182 Fa~i~~ls~e~Fie~L~~~-L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~ 260 (380)
+. .. ....+.+.+. ....-+++|.++ +.++....++++..++.. + .
T Consensus 75 l~---~~--~~w~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~i~~~~~~~~--~--------------~ 121 (168)
T 1f9a_A 75 IE---FN--SIWVSYVESLTPPFDIVYSGNPL------------VRVLFEERGYEVKRPEMF--N--------------R 121 (168)
T ss_dssp CS---CG--GGHHHHHHHHSCCCSEEECCCHH------------HHHHHHHTTCEEECCCCC--S--------------T
T ss_pred cc---cH--HHHHHHHHHhccCCCEEEECcHH------------HHHhhhhcCcEEEeCCcc--c--------------c
Confidence 11 11 1222222111 134445555432 233334456665433221 1 1
Q ss_pred CccchHHHHHHHHcCC
Q 016934 261 GQVSSTRVRQALAMGD 276 (380)
Q Consensus 261 ~~ISST~IR~~L~~Gd 276 (380)
..||||.||+.++.|+
T Consensus 122 ~~ISST~IR~~~~~g~ 137 (168)
T 1f9a_A 122 KEYSGTEIRRRMLNGE 137 (168)
T ss_dssp TTSSHHHHHHHHHHTC
T ss_pred CcccHHHHHHHHHcCC
Confidence 3599999999999875
No 30
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.17 E-value=2.3e-10 Score=110.14 Aligned_cols=92 Identities=10% Similarity=-0.017 Sum_probs=60.9
Q ss_pred CceEEEEeecCccCHHHHHHHHHHHHhC----C-CEE-EeecC-cccccccCCCCCCCChHHHHHHHHhcCCccCeEEEE
Q 016934 104 AGGIVALGKFDALHIGHRELAIQASKIG----A-PYL-LSFIG-MAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPV 176 (380)
Q Consensus 104 ~~~vvtIG~FDGvHlGHq~LI~~A~~~g----~-~~V-vtF~~-P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~ 176 (380)
...+++.|+||++|+||+.|+++|.+.. . .++ ++|.| |... .. ..+++.++|+++++..-.+.+.+.+.
T Consensus 8 ~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~---~K-~~l~s~~~R~~ml~~ai~~~~~~~v~ 83 (279)
T 1kqn_A 8 EVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAY---KK-KGLIPAYHRVIMAELATKNSKWVEVD 83 (279)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGG---CC-TTCCCHHHHHHHHHHHTTTCSSEEEC
T ss_pred ceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCc---cc-cCCCCHHHHHHHHHHHhcCCCcEEEe
Confidence 3477999999999999999999987652 1 233 37776 4321 11 34788999999998763347888888
Q ss_pred eccccccccCCCCHHHHHHHHHHhh
Q 016934 177 EFQIQFSSVRHLSPQQFVEKLSREL 201 (380)
Q Consensus 177 ~F~~~Fa~i~~ls~e~Fie~L~~~L 201 (380)
+|+.+... ..-.-+-++.+.+.+
T Consensus 84 ~~E~~~~~--~syTidtL~~l~~~~ 106 (279)
T 1kqn_A 84 TWESLQKE--WKETLKVLRHHQEKL 106 (279)
T ss_dssp CTGGGCSS--CCCHHHHHHHHHHHH
T ss_pred ccccccCC--CCcHHHHHHHHHHHH
Confidence 88765432 112233344454555
No 31
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.15 E-value=2.9e-10 Score=102.06 Aligned_cols=131 Identities=15% Similarity=0.178 Sum_probs=82.2
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
..+++.|+||++|.||+.++++|++....++ ++. +|. ..++++.++|.++++..-.+.+.+.+.+|+.
T Consensus 4 ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~-~p~-------K~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~-- 73 (168)
T 3f3m_A 4 TIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLK-NSK-------KEGTFSLEERMDLIEQSVKHLPNVKVHQFSG-- 73 (168)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC-------------CCSCHHHHHHHHHHHTTTCTTEEEEECCS--
T ss_pred eEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcC-CCC-------CCCCCCHHHHHHhHHHHhcCCCCEEEEEcCC--
Confidence 4689999999999999999999998875543 332 231 1367899999999987433467777777651
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHH---HHHHHhhc--CcEEEEEcceeccCCCCCcccCCCC
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASE---LVRLCEEY--GMDACIINSVMDKHQDSRDIDCNDS 257 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~---Lk~l~~~~--G~~v~iV~~v~~~~~~~~~~~~~~~ 257 (380)
+ ..+++ +.++++.+|.|.|-- .|++. +..+.+.. +++...+.+ ..
T Consensus 74 -----~-tvd~~----~~l~~~~~I~G~d~~------~d~~~e~~~a~~~r~l~~~~e~v~l~~--~p------------ 123 (168)
T 3f3m_A 74 -----L-LVDYC----EQVGAKTIIRGLRAV------SDFEYELRLTSMNKKLNNEIETLYMMS--ST------------ 123 (168)
T ss_dssp -----C-HHHHH----HHHTCCEEEEEECTT------CCHHHHHHHHHHHHHHCTTSEEEEEEC--CT------------
T ss_pred -----C-HHHHH----HHcCCCEEEEcCCch------hhhhHHHHHhHHhHhhCCCCcEEEEeC--Cc------------
Confidence 2 23444 567889999994421 12222 22222222 244333221 11
Q ss_pred ccCCccchHHHHHHHHcCC
Q 016934 258 KERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 258 ~~~~~ISST~IR~~L~~Gd 276 (380)
.-..||||.||+.++.|.
T Consensus 124 -~~~~ISST~IRe~~~~g~ 141 (168)
T 3f3m_A 124 -NYSFISSSIVKEVAAYRA 141 (168)
T ss_dssp -TTTTCCHHHHHHHHHTTC
T ss_pred -ccccccHHHHHHHHHcCC
Confidence 012499999999999875
No 32
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.14 E-value=6.6e-11 Score=105.18 Aligned_cols=131 Identities=17% Similarity=0.231 Sum_probs=85.9
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEEE-eecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYLL-SFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQFS 183 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~Vv-tF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~Fa 183 (380)
..+++.|.||.+|.||+.++++|++.+..+++ ...+|. +.++++.++|.++++..-.+++.+.+.+|+.
T Consensus 3 ~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~~-------K~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~--- 72 (157)
T 3nv7_A 3 KVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSA-------KNPMFSLDERLKMIQLATKSFKNVECVAFEG--- 72 (157)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCGG-------GCCSSCHHHHHHHHHHHHTTSTTEEEEEECS---
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCCC-------CCCCCCHHHHHHHHHHHhcCCCcEEEEecCc---
Confidence 36799999999999999999999998765432 222232 1368899999999887322478888777642
Q ss_pred ccCCCCHHHHHHHHHHhhCccEEEEc----CCCCCCCCCCCCHHHHHHHHhhc--CcEEEEEcceeccCCCCCcccCCCC
Q 016934 184 SVRHLSPQQFVEKLSRELGVRGVVAG----ENYRFGYKAAGDASELVRLCEEY--GMDACIINSVMDKHQDSRDIDCNDS 257 (380)
Q Consensus 184 ~i~~ls~e~Fie~L~~~L~vk~IVVG----~DFrFG~~r~Gd~~~Lk~l~~~~--G~~v~iV~~v~~~~~~~~~~~~~~~ 257 (380)
+ ..+| +++++++.+|-| .||.+.. .+..+-+++ ++++..+++- .
T Consensus 73 ----l-~~~~----~~~~~~~~ivrG~r~~~D~~ye~-------~~a~~n~~l~~~ietv~l~~~-~------------- 122 (157)
T 3nv7_A 73 ----L-LAYL----AKEYHCKVLVRGLRVVSDFEYEL-------QMGYANKSLNHELETLYFMPT-L------------- 122 (157)
T ss_dssp ----C-HHHH----HHHTTCCCBCCCCSCCCCHHHHH-------HHHHHHHHSSCCCCCCCCCCC-H-------------
T ss_pred ----h-HHHH----HHHcCCCEEEECCcccchhhhhH-------HHHHHHHHhCCCceEEEEcCC-c-------------
Confidence 2 3344 456799999999 7775321 122222333 3443322221 0
Q ss_pred ccCCccchHHHHHHHHcCC
Q 016934 258 KERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 258 ~~~~~ISST~IR~~L~~Gd 276 (380)
+-..||||.||+.+..|.
T Consensus 123 -~~~~iSSt~vRe~~~~gg 140 (157)
T 3nv7_A 123 -QNAFISSSIVRSIIAHKG 140 (157)
T ss_dssp -HHHTCCHHHHHHHHHTTC
T ss_pred -ccceeeHHHHHHHHHcCC
Confidence 113699999999998763
No 33
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.14 E-value=2.6e-10 Score=107.50 Aligned_cols=111 Identities=15% Similarity=0.064 Sum_probs=72.2
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhC-C-CEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIG-A-PYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQI 180 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g-~-~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~ 180 (380)
..+++.|+||++|.||+.++++|.+.. . .++ +++++|.+ ..++++.++|.++++..-.+++.+.+.+|+.
T Consensus 24 ~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p~K------~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~ 97 (242)
T 1yum_A 24 RIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPHR------ETPQVSAAQRLAMVERAVAGVERLTVDPREL 97 (242)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCGGG------SCTTCCHHHHHHHHHHHHTTCTTEEECCGGG
T ss_pred eEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCCCC------CCCCCCHHHHHHHHHHHhcCCCeEEEeeeee
Confidence 467899999999999999999998763 3 333 47765442 1347899999999986211378888878764
Q ss_pred cccccCCCCHHHHHHHHHHhhCcc---EEEEcCCCCCCCCCCCCHH
Q 016934 181 QFSSVRHLSPQQFVEKLSRELGVR---GVVAGENYRFGYKAAGDAS 223 (380)
Q Consensus 181 ~Fa~i~~ls~e~Fie~L~~~L~vk---~IVVG~DFrFG~~r~Gd~~ 223 (380)
+-.. .--.-++++.+...+++. .+++|.|--..-..+.+++
T Consensus 98 ~~~~--~sytvdtl~~l~~~~~p~~~~~fI~G~D~l~~l~~W~~~~ 141 (242)
T 1yum_A 98 QRDK--PSYTIDTLESVRAELAADDQLFMLIGWDAFCGLPTWHRWE 141 (242)
T ss_dssp GSSS--SCCHHHHHHHHHHHSCTTCEEEEEEEHHHHTTGGGSTTGG
T ss_pred cCCC--CCCHHHHHHHHHHHhCCCCcEEEEEehhHhhhhhhhcCHH
Confidence 3221 112345566555555566 7999997433333333433
No 34
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.12 E-value=5.2e-10 Score=105.79 Aligned_cols=73 Identities=11% Similarity=-0.006 Sum_probs=50.0
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh----CCC-EE-EeecC-cccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEe
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI----GAP-YL-LSFIG-MAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVE 177 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~----g~~-~V-vtF~~-P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~ 177 (380)
..+++.|+||++|+||+.|+++|.+. +.. +| ++|.| +.... ..++++.++|+++++..-.+.+.+.+.+
T Consensus 7 ~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~----k~~~~~~~~R~~m~~~ai~~~~~~~v~~ 82 (252)
T 1nup_A 7 VVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYG----KKDLAASHHRVAMARLALQTSDWIRVDP 82 (252)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCS----SSCCCCHHHHHHHHHHHGGGCSSEEECC
T ss_pred eEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCccc----CCCCCCHHHHHHHHHHHhcCCCceEeeh
Confidence 36789999999999999999998765 222 34 67876 32211 1247899999999876422345666666
Q ss_pred cccc
Q 016934 178 FQIQ 181 (380)
Q Consensus 178 F~~~ 181 (380)
|+..
T Consensus 83 ~E~~ 86 (252)
T 1nup_A 83 WESE 86 (252)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6543
No 35
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.02 E-value=1.9e-09 Score=96.99 Aligned_cols=132 Identities=17% Similarity=0.238 Sum_probs=82.4
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEEE-eecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEE-Eeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYLL-SFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAP-VEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~Vv-tF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~-~~F~~~F 182 (380)
..++..|.||.+|.||..++++|++....+++ ...+|. +.++++.++|.++++..-.+++.+.+ .+|+.
T Consensus 3 ~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~~-------K~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~-- 73 (171)
T 3nd5_A 3 KIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINTS-------KQTLFTPEEKKYLIEEATKEMPNVRVIMQETQ-- 73 (171)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-------------CCCHHHHHHHHHHHHTTCTTEEEEEECSS--
T ss_pred eEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCCC-------CCCCCCHHHHHHHHHHHHccCCCEEEeeCCCC--
Confidence 36789999999999999999999988755432 222231 13678999999998863224677776 66641
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHH---hhc--CcEEEEEcceeccCCCCCcccCCCC
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLC---EEY--GMDACIINSVMDKHQDSRDIDCNDS 257 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~---~~~--G~~v~iV~~v~~~~~~~~~~~~~~~ 257 (380)
+ ..+++ ++++++.+|.|.| ...|.+.+.+++ +.. +.+...+.+..
T Consensus 74 -----~-tvd~~----~~l~~~~~i~G~~------~~~d~~~e~~la~~nr~l~~~~etv~l~~~~-------------- 123 (171)
T 3nd5_A 74 -----L-TVESA----KSLGANFLIRGIR------NVKDYEYEKDIAKMNQHLAPEIETVFLLAEE-------------- 123 (171)
T ss_dssp -----C-HHHHH----HHHTCCEEEEEEC------SHHHHHHHHHHHHHHHHHCTTSEEEEEECCG--------------
T ss_pred -----c-HHHHH----HHCCCCEEEECCC------chhhhHHHHHHHHHhhhhcCCccEEEEeCCc--------------
Confidence 2 23444 4568889999943 223344443333 222 34443332211
Q ss_pred ccCCccchHHHHHHHHcCC
Q 016934 258 KERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 258 ~~~~~ISST~IR~~L~~Gd 276 (380)
.-..||||.||+.++.|.
T Consensus 124 -~~~~ISST~IRe~~~~g~ 141 (171)
T 3nd5_A 124 -PYAHVSSSLLKEVLRFGG 141 (171)
T ss_dssp -GGTTCCHHHHHHHHHTTC
T ss_pred -cccccchHHHHHHHHcCC
Confidence 013699999999999864
No 36
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=98.95 E-value=1.7e-08 Score=90.31 Aligned_cols=130 Identities=16% Similarity=0.227 Sum_probs=81.8
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccccc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQFS 183 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~Fa 183 (380)
.++..|.||.+|.||..++++|++....++ ++.++ +..++++.++|.++++..-.+++.+.+.+|+.
T Consensus 14 i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~--------~kk~~~~~~~R~~ml~~a~~~~~~v~v~~~e~--- 82 (173)
T 1vlh_A 14 KAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP--------RKKCMFTLEERKKLIEEVLSDLDGVKVDVHHG--- 82 (173)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT--------TCCCSSCHHHHHHHHHHHTTTCTTEEEEEECS---
T ss_pred EEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC--------CCCCCCCHHHHHHHHHHHhcCCCCEEEecCcc---
Confidence 678999999999999999999999875543 33322 12367899999999985323477777766641
Q ss_pred ccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHH---hhc--CcEEEEEcceeccCCCCCcccCCCCc
Q 016934 184 SVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLC---EEY--GMDACIINSVMDKHQDSRDIDCNDSK 258 (380)
Q Consensus 184 ~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~---~~~--G~~v~iV~~v~~~~~~~~~~~~~~~~ 258 (380)
. ..++ ++.++.+.++.| -..+.|++.+..++ +.. +.+...+....
T Consensus 83 ----~-tvd~----l~~l~~~~~i~g------l~~w~d~~~~~~~~~~~r~~~~~~~~i~l~~~~--------------- 132 (173)
T 1vlh_A 83 ----L-LVDY----LKKHGIKVLVRG------LRAVTDYEYELQMALANKKLYSDLETVFLIASE--------------- 132 (173)
T ss_dssp ----C-HHHH----HHHHTCCEEEEE------ECTTSCHHHHHHHHHHHHHHSTTCEEEEEECCG---------------
T ss_pred ----h-HHHH----HHHhCCCeEEeC------CCcccchhhccchhhcCCCCCCCCcEEEEeCCC---------------
Confidence 1 2233 355677877755 33455555544221 111 23332222110
Q ss_pred cCCccchHHHHHHHHcCC
Q 016934 259 ERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 259 ~~~~ISST~IR~~L~~Gd 276 (380)
.-..||||.||+.+++|.
T Consensus 133 ~~~~iSST~IR~~i~~g~ 150 (173)
T 1vlh_A 133 KFSFISSSLVKEVALYGG 150 (173)
T ss_dssp GGTTCCHHHHHHHHHTTC
T ss_pred CCCceeHHHHHHHHHcCC
Confidence 012499999999999875
No 37
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=98.90 E-value=9.5e-09 Score=99.24 Aligned_cols=129 Identities=19% Similarity=0.125 Sum_probs=88.4
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCEEEeecC-cccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEe----cc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPYLLSFIG-MAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVE----FQ 179 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~~-P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~----F~ 179 (380)
++..+....|+|.||++||++|++.+..+|+||+. |..+...+- ...+.+.+++.++|+..| ||.++.-. |-
T Consensus 23 ~ig~VPTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~G--vD~vF~P~~~emYP 100 (283)
T 3uk2_A 23 RTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKEN--VYVLFAPTERDMYP 100 (283)
T ss_dssp SCEEEEECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTTT--CSEEECCCHHHHCS
T ss_pred eEEEECCCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHcC--CCEEEeCCHHHcCC
Confidence 45777888899999999999999988888899987 876332221 234567888999999998 88765422 11
Q ss_pred ccccccCCCC------------HHHH------HHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEE--
Q 016934 180 IQFSSVRHLS------------PQQF------VEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACII-- 239 (380)
Q Consensus 180 ~~Fa~i~~ls------------~e~F------ie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV-- 239 (380)
..+...-..+ |--| +.+|..-.+++. ..||.|+.++...|+++.+.++|.|.++
T Consensus 101 ~g~~t~v~v~~~l~~~LeG~~RPgHF~GV~TVV~KLfniv~Pd~------A~FG~Kd~qql~~ir~mv~dl~~~v~iv~~ 174 (283)
T 3uk2_A 101 EPQEYRVQPPHDLGDILEGEFRPGFFTGVCTVVTKLMACVQPRV------AVFGKKDYQQLMIVRRMCQQLALPVEIVAA 174 (283)
T ss_dssp SCCCCCCCCCHHHHSSTHHHHSTTHHHHHHHHHHHHHHHHCCSE------EEEETTSHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCeeEEEeCcccchhhccCcCCcccchhhHHHHHHHhhcCCCe------eEeCCchhhhHHHHHHHHHHcCCceEEEec
Confidence 1222100111 1112 122333334443 4689999999999999999999999888
Q ss_pred cce
Q 016934 240 NSV 242 (380)
Q Consensus 240 ~~v 242 (380)
|.+
T Consensus 175 ptv 177 (283)
T 3uk2_A 175 ETV 177 (283)
T ss_dssp CCC
T ss_pred CCE
Confidence 766
No 38
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=98.87 E-value=1.5e-08 Score=91.95 Aligned_cols=131 Identities=18% Similarity=0.265 Sum_probs=83.8
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEEEee-cCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYLLSF-IGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQFS 183 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF-~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~Fa 183 (380)
..++..|.||.+|.||..++++|.+....+++.- .+| . ..++++.++|.++++..-.+.+.+.+.+|+.
T Consensus 22 ki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np------~-K~~~~s~eeR~~mv~~a~~~~~~v~V~~~e~--- 91 (177)
T 3nbk_A 22 TGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP------A-KTGMFDLDERIAMVKESTTHLPNLRVQVGHG--- 91 (177)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT------T-SCCSSCHHHHHHHHHHHCTTCTTEEEEECCS---
T ss_pred EEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC------C-CCCCCCHHHHHHHHHHHhCCCCCEEEEecCc---
Confidence 4679999999999999999999999876544321 112 1 1367899999999887433467777766641
Q ss_pred ccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHh---h-cCcEEEEEcceeccCCCCCcccCCCCcc
Q 016934 184 SVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCE---E-YGMDACIINSVMDKHQDSRDIDCNDSKE 259 (380)
Q Consensus 184 ~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~---~-~G~~v~iV~~v~~~~~~~~~~~~~~~~~ 259 (380)
+. .+| +++++++.+|.|- ..+.|++...+++. + -++++..+.+-. .
T Consensus 92 ----l~-vd~----~~~~~a~~ivrGl------r~~~Dfeye~~~a~~nr~l~~ietvfl~~~~-~-------------- 141 (177)
T 3nbk_A 92 ----LV-VDF----VRSCGMTAIVKGL------RTGTDFEYELQMAQMNKHIAGVDTFFVATAP-R-------------- 141 (177)
T ss_dssp ----CH-HHH----HHHTTCCEEEEEE------CTTCCHHHHHHHHHHHHHHHCCEEEEEECCG-G--------------
T ss_pred ----hH-HHH----HHHcCCCEEEECC------CchhHHHHHHHHHHHHHhcCCCceEEEeCCC-c--------------
Confidence 21 233 3568999999872 22334444333221 1 245544332210 0
Q ss_pred CCccchHHHHHHHHcC
Q 016934 260 RGQVSSTRVRQALAMG 275 (380)
Q Consensus 260 ~~~ISST~IR~~L~~G 275 (380)
-..||||.||+.++.|
T Consensus 142 ~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 142 YSFVSSSLAKEVAMLG 157 (177)
T ss_dssp GSSCCHHHHHHHHHTT
T ss_pred ccccchHHHHHHHHcC
Confidence 1369999999999876
No 39
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=98.79 E-value=6.4e-09 Score=93.84 Aligned_cols=140 Identities=15% Similarity=0.122 Sum_probs=85.3
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCcc--CeEEEEeccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYC--GNVAPVEFQI 180 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~v--D~vv~~~F~~ 180 (380)
..++.-|.||.+|.||..+++ |.+.-..++ ++.++| ...++++.++|+++++..-.+. ..+.+.+++.
T Consensus 3 ~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~~-------~k~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 3 KIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAHA-------WGKNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp EEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC--------------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred EEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCCC-------CCCCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 357889999999999999997 654333332 222211 1235788899998876632111 2345545443
Q ss_pred cccc-c-CCCCHHHHHHHHHHhhC-cc-EEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCC
Q 016934 181 QFSS-V-RHLSPQQFVEKLSRELG-VR-GVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCND 256 (380)
Q Consensus 181 ~Fa~-i-~~ls~e~Fie~L~~~L~-vk-~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~ 256 (380)
+..+ - ...|. +-++.|.+.+. .+ .+++|.|.-.+-..+.+++.|.+.+ .+.++++
T Consensus 75 ~l~~~~~~syT~-dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~l~~~~-----~~vv~~r--------------- 133 (177)
T 3h05_A 75 ALYQPGQSVTTY-ALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERW-----TVMACPE--------------- 133 (177)
T ss_dssp HHC----CCCHH-HHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHS-----EEEECCC---------------
T ss_pred hcccCCCCcchH-HHHHHHHHHhcCCCeEEEEecchhhhcccchhHHHHHHhC-----CEEEEcC---------------
Confidence 2110 0 01222 33555555542 23 6899999888888888888877654 3555553
Q ss_pred CccCCccchHHHHHHHHcCC
Q 016934 257 SKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 257 ~~~~~~ISST~IR~~L~~Gd 276 (380)
...||||.||+.|++|+
T Consensus 134 ---~~~iSST~IR~~i~~g~ 150 (177)
T 3h05_A 134 ---KVKIRSTDIRNALIEGK 150 (177)
T ss_dssp ---SSCCCHHHHHHHHHHTC
T ss_pred ---CCCCcHHHHHHHHHcCC
Confidence 14699999999999884
No 40
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.69 E-value=1.6e-07 Score=92.98 Aligned_cols=133 Identities=20% Similarity=0.256 Sum_probs=88.9
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCC--CEE--EeecCcccccc-cCCCCCCCChHHHHHHHHhcCCccCeEEEE-ec
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGA--PYL--LSFIGMAEVFG-WEPRAPIVAKCDRKRVLSSWAPYCGNVAPV-EF 178 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~--~~V--vtF~~P~~vl~-~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~-~F 178 (380)
..+++-|.||-+|.||..+|++|++.+. .++ |.-+. .+.. ..+..|+++.++|.++++++. ++|.|++. +|
T Consensus 199 ~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~--~v~~~Kg~~~pi~~~~ER~~~v~~~~-~vd~V~v~~~~ 275 (341)
T 3elb_A 199 TVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQ--EVNHYKGKNYPIMNLHERTLSVLACR-YVSEVVIGAPY 275 (341)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHH--HHHHHHCTTCCSSCHHHHHHHHHTBT-TCCEEEEEECS
T ss_pred EEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCH--hhHhhcCCCCCCCCHHHHHHHHHHcC-CCCCEEECCCC
Confidence 4689999999999999999999999987 544 33332 0100 122358999999999999986 69998873 22
Q ss_pred cccccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCH-HHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCC
Q 016934 179 QIQFSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDA-SELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDS 257 (380)
Q Consensus 179 ~~~Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~-~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~ 257 (380)
. ++ .+|+ ++++++.+|-|.|+..-.....|. ...++ .| .+..++..
T Consensus 276 ~--------l~-~~~~----~~~~~~~iv~G~d~~~~~~~g~d~y~~~k~----~G-~~~~i~~~--------------- 322 (341)
T 3elb_A 276 A--------VT-AELL----SHFKVDLVCHGKTEIIPDRDGSDPYQEPKR----RG-IFRQIDSG--------------- 322 (341)
T ss_dssp S--------CC-HHHH----HHTTCSEEEECSSCCCCCTTSCCTTHHHHH----HT-CEEECCCS---------------
T ss_pred c--------ch-HHHH----HhcCCcEEEECCCCccccCCccchHHHHHh----CC-EEEEcCCC---------------
Confidence 1 22 3554 567999999999987532221232 23332 23 35566542
Q ss_pred ccCCccchHHHHHHHHcCC
Q 016934 258 KERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 258 ~~~~~ISST~IR~~L~~Gd 276 (380)
..+|+|.|-+-|....
T Consensus 323 ---~~~STt~ii~RI~~nr 338 (341)
T 3elb_A 323 ---SNLTTDLIVQRIITNR 338 (341)
T ss_dssp ---CCCCHHHHHHHHHC--
T ss_pred ---CCCCHHHHHHHHHHHH
Confidence 4599999988876543
No 41
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=98.65 E-value=1.4e-07 Score=92.60 Aligned_cols=160 Identities=15% Similarity=0.095 Sum_probs=94.0
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCE--EEeecCccc--ccccCCCCCCCChHHHHHHHHhcCCccCe-EEEEeccc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPY--LLSFIGMAE--VFGWEPRAPIVAKCDRKRVLSSWAPYCGN-VAPVEFQI 180 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~--VvtF~~P~~--vl~~~~~~~l~s~~~R~~lL~~lg~~vD~-vv~~~F~~ 180 (380)
.++..|.||.+|.||..|+++|.+....+ +++.++|.. .+...+....++.++|.++++..-.+.+. +.+.+|+.
T Consensus 4 ~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~~~~~ 83 (365)
T 1lw7_A 4 VGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHLVE 83 (365)
T ss_dssp EEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEEEEC
T ss_pred EEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEEEecc
Confidence 57889999999999999999999886553 355544310 00011112248999999998765334555 77777643
Q ss_pred cccccCCCC-----HHHHHHHHHH--hhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCccc
Q 016934 181 QFSSVRHLS-----PQQFVEKLSR--ELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDID 253 (380)
Q Consensus 181 ~Fa~i~~ls-----~e~Fie~L~~--~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~ 253 (380)
..- .... ..+-++.+++ .+.+..++.++++- . ..+.+++|+++..+++.. .
T Consensus 84 ~~~--~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~--------~---~~~~~~~~~e~v~l~~~~-~-------- 141 (365)
T 1lw7_A 84 DGI--PSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD--------K---APYEKYLGLEVSLVDPDR-T-------- 141 (365)
T ss_dssp SSS--CCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG--------H---HHHHHHTCCEEECCCSSC-C--------
T ss_pred CCC--CCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCC--------H---HHHHHHcCCceEEeCCcc-c--------
Confidence 210 0000 1222343455 46777666555431 1 133345688877765411 1
Q ss_pred CCCCccCCccchHHHHHHHHc--CCc-hhhhhhcceeeeEEEE
Q 016934 254 CNDSKERGQVSSTRVRQALAM--GDM-KYVSELLGRQHRLILT 293 (380)
Q Consensus 254 ~~~~~~~~~ISST~IR~~L~~--GdI-~~An~LLGrpy~i~G~ 293 (380)
...||||.||+.... ..+ ..+.+.||..+.|.|.
T Consensus 142 ------~~~iSsT~IRe~~~~~~~~v~~~v~~~lg~k~~IvG~ 178 (365)
T 1lw7_A 142 ------FFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGG 178 (365)
T ss_dssp ------SSCCCHHHHHHCGGGGGGGSCTTTGGGTCEEEEEECC
T ss_pred ------CCCCCHHHHHhChhhChhhCCHHHHHhhhCeEEEECC
Confidence 257999999996531 111 2345567877777774
No 42
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=98.58 E-value=3.2e-07 Score=91.08 Aligned_cols=163 Identities=15% Similarity=0.146 Sum_probs=94.8
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCCc---cCeEEEEecccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPY---CGNVAPVEFQIQ 181 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~---vD~vv~~~F~~~ 181 (380)
..|+++|.||.+|+||..|.+.|.+....+++... ..+. ....++.+.|.+.++.+-.. -+.+++..+..+
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~-----~g~~-K~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~ 229 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPI-----LGAK-KPDDFPTEVIVEAYQALIRDFLPQERVAFFGLATP 229 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEB-----CSCC-CTTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSC
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhCCcEEEEEC-----CCCC-CCCCCCHHHHHHHHHHHHhhcCCCcceEEEechHH
Confidence 57899999999999999999999887432333221 1221 22357788888765543211 133443333322
Q ss_pred ccccCCCCHH-HHHHHH-HHhhCccEEEEcCCCC--CCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCC----Cccc
Q 016934 182 FSSVRHLSPQ-QFVEKL-SRELGVRGVVAGENYR--FGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDS----RDID 253 (380)
Q Consensus 182 Fa~i~~ls~e-~Fie~L-~~~L~vk~IVVG~DFr--FG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~----~~~~ 253 (380)
.. .--|. ..++.+ .+.+++.+++||.|.- .-.-.+.+++.|-+.+.+.|+++..++...+...-. ..+-
T Consensus 230 m~---~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~i~~~~~~l~i~~v~~~~~~Y~~~~~~~~~~~~~ 306 (349)
T 1v47_A 230 MR---YAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPLCGGIASERTC 306 (349)
T ss_dssp CC---CCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETTTTEEEETTTS
T ss_pred hh---cCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccccCcccHHHHHHhhhhcCceEEeccccEEcccCCceEEcccc
Confidence 21 12333 344543 4578999999999974 222233455555444334678877766654322110 0111
Q ss_pred CC-CCccCCccchHHHHHHHHcCC
Q 016934 254 CN-DSKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 254 ~~-~~~~~~~ISST~IR~~L~~Gd 276 (380)
|. .......||||.||+.|++|.
T Consensus 307 p~~~~~~~~~ISgT~iR~~L~~G~ 330 (349)
T 1v47_A 307 PEGHREKRTAISMTKVRALLREGK 330 (349)
T ss_dssp CGGGGGGCEECCHHHHHHHHHTTC
T ss_pred CccCCCcccccCHHHHHHHHHCcC
Confidence 11 122235799999999999997
No 43
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=98.50 E-value=1.3e-06 Score=88.17 Aligned_cols=161 Identities=16% Similarity=0.193 Sum_probs=94.1
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh-CCC-EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCc---cCeEE--EEe
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI-GAP-YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPY---CGNVA--PVE 177 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~-g~~-~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~---vD~vv--~~~ 177 (380)
..|++.|.||.+|+||..|++.|.+. +.. +++.. +.++. ....++.+.|.+.++.+-.. -+.++ +.+
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P-----~~g~~-K~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p 266 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHM-----LLGKL-KKGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYG 266 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEE-----EECCC-CTTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEE-----CCCCC-CCCCCCHHHHHHHHHHHHHhcCCCcceEEEech
Confidence 47899999999999999999998765 443 33222 12221 12346778888775553211 13333 344
Q ss_pred ccccccccCCCCHHH-HHHH-HHHhhCccEEEEcCCCC--CCCCCCCCHHHHHHHHh--h-cCcEEEEEcceeccCCCC-
Q 016934 178 FQIQFSSVRHLSPQQ-FVEK-LSRELGVRGVVAGENYR--FGYKAAGDASELVRLCE--E-YGMDACIINSVMDKHQDS- 249 (380)
Q Consensus 178 F~~~Fa~i~~ls~e~-Fie~-L~~~L~vk~IVVG~DFr--FG~~r~Gd~~~Lk~l~~--~-~G~~v~iV~~v~~~~~~~- 249 (380)
....++ -|.+ .++. +.+.+++.+++||.|.- .-.-.+.+++.|-+... + .|+++.+++...+...-.
T Consensus 267 ~~m~~a-----GPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~~~~ 341 (396)
T 1jhd_A 267 FDMLYA-----GPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNK 341 (396)
T ss_dssp CCCCCC-----THHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTE
T ss_pred HHhhcC-----CchHHHHHHHHHHcCCCcEEEECCCCCCccccCCcchHHHHHHhcccccccceeEEecccceecCCCCe
Confidence 443333 3333 3444 34578999999999985 22334445555544321 2 678887776543321100
Q ss_pred -C--cccCCC-CccCCccchHHHHHHHHcCC
Q 016934 250 -R--DIDCND-SKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 250 -~--~~~~~~-~~~~~~ISST~IR~~L~~Gd 276 (380)
. .+-|.. ......||||.||+.|++|.
T Consensus 342 ~~~~~~~p~~~~~~~~~ISgT~IR~~L~~G~ 372 (396)
T 1jhd_A 342 IVMMRDVPDHTKEDFVLLSGTKVREMLGQGI 372 (396)
T ss_dssp EEEGGGCTTCCGGGEECCCHHHHHHHHHTTC
T ss_pred EEEccccCcccCCCccccCHHHHHHHHHCCC
Confidence 0 011111 22235799999999999996
No 44
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.18 E-value=9.3e-06 Score=78.45 Aligned_cols=72 Identities=17% Similarity=0.064 Sum_probs=46.9
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCc----cCeEEEEec
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPY----CGNVAPVEF 178 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~----vD~vv~~~F 178 (380)
..++..|.||.+|.||..|+++|.+....++ ++-.+|.. ...+.++.++|+++++..-.+ -+.+.+++|
T Consensus 8 ~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~~-----~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~ 82 (352)
T 2qjt_B 8 DISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTP-----NIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPL 82 (352)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCCC-----CSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred cEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCCc-----ccCCCCCHHHHHHHHHHHhccccCccceEEEEEc
Confidence 4578899999999999999999998754332 33333211 123457899999887653200 145666666
Q ss_pred ccc
Q 016934 179 QIQ 181 (380)
Q Consensus 179 ~~~ 181 (380)
...
T Consensus 83 ~d~ 85 (352)
T 2qjt_B 83 ADY 85 (352)
T ss_dssp ECC
T ss_pred CCC
Confidence 543
No 45
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=98.17 E-value=2e-06 Score=84.03 Aligned_cols=121 Identities=18% Similarity=0.179 Sum_probs=75.1
Q ss_pred EEeecCccCHHHHHHHHHHHHhCCCEEEeec-CcccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEec----cccc
Q 016934 109 ALGKFDALHIGHRELAIQASKIGAPYLLSFI-GMAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVEF----QIQF 182 (380)
Q Consensus 109 tIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~-~P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~F----~~~F 182 (380)
|+| ++|.||+.|+++|++.+..+|+|++ +|..+...+- ....-+.++..++|+..| ||.++.-.. -..|
T Consensus 50 TMG---~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~G--vD~vF~P~~~emYP~g~ 124 (314)
T 3inn_A 50 TMG---YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDAQ--VDYLFAPTVSDMYPRPM 124 (314)
T ss_dssp ECS---SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHTT--CSEEECCCHHHHCSSCC
T ss_pred CCC---ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhCC--CCEEECCCHHHcCCCCC
Confidence 778 7999999999999999877777755 4876543321 122346677789999998 886543111 1111
Q ss_pred cc------c-CCCCHH----HH------HHHHHHhhCccEEEEcCC-CCCCCCCCCCHHHHHHHHhhcCcEEEEEcc
Q 016934 183 SS------V-RHLSPQ----QF------VEKLSRELGVRGVVAGEN-YRFGYKAAGDASELVRLCEEYGMDACIINS 241 (380)
Q Consensus 183 a~------i-~~ls~e----~F------ie~L~~~L~vk~IVVG~D-FrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~ 241 (380)
.. + ..|... -| +.+|..- |..| ..||.|.......++++.+.+++.|.|+.-
T Consensus 125 ~t~V~v~~l~~~LeG~~RPgHF~GV~TVV~KLfni-------v~Pd~A~FGeKD~QQl~vIrrmV~DL~~pVeIv~~ 194 (314)
T 3inn_A 125 QTVVDVPPLGNQIEGEARPGHFAGVATVVSKLFNI-------VGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGV 194 (314)
T ss_dssp CCEEECHHHHSSTHHHHSTTHHHHHHHHHHHHHHH-------HCCSEEEEETTSHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eeEEEcCCcccccCCCCCcchhhhHHHHHHHHHhc-------cCCCEEEECccHHHHHHHHHHHHHHcCCceEEEec
Confidence 10 0 001000 11 1112222 2224 678888888888889999999988887754
No 46
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=97.51 E-value=0.0021 Score=64.81 Aligned_cols=162 Identities=20% Similarity=0.239 Sum_probs=93.4
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh-CCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCCc--cCeEEEEec--c
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI-GAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPY--CGNVAPVEF--Q 179 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~-g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~--vD~vv~~~F--~ 179 (380)
..|+++..++.+|+||.+++.++... +.-+++.+ +.++. ..--++..-|.+.++.+-.. -+.+++..| .
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~~~~lllhP-----lvG~t-K~~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~~ 261 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHP-----VVGLT-KPGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLA 261 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECC-----BCSBC-CTTCCCHHHHHHHHHHHGGGSSTTCEEECCBCCB
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHcCCcEEEEE-----CCCCC-CCCCCCHHHHHHHHHHHHHhCCCccEEEEecchh
Confidence 47899999999999998887776543 32233322 22221 11235666676654443211 244554333 3
Q ss_pred ccccccCCCCHHHHH-HH-HHHhhCccEEEEcCCCCCCCC--CC-------CCHHH-HHHHHhhcCcEEEEEcceeccCC
Q 016934 180 IQFSSVRHLSPQQFV-EK-LSRELGVRGVVAGENYRFGYK--AA-------GDASE-LVRLCEEYGMDACIINSVMDKHQ 247 (380)
Q Consensus 180 ~~Fa~i~~ls~e~Fi-e~-L~~~L~vk~IVVG~DFrFG~~--r~-------Gd~~~-Lk~l~~~~G~~v~iV~~v~~~~~ 247 (380)
..++ -|.+=+ +- +-+++++.+++||.|.- |-+ .. .++.. +.++..+.|+++..++...+..+
T Consensus 262 mryA-----GPrEai~HAiiRkN~GcthfIVGRDhA-G~g~~~~~~d~Y~~~~aq~i~~~~~~el~I~~v~f~~~~Y~~~ 335 (395)
T 1r6x_A 262 MRMS-----GDREAVWHAIIRKNYGASHFIVGRDHA-GPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPD 335 (395)
T ss_dssp CCCC-----HHHHHHHHHHHHHHTTCSEEEECTTTT-CCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCEEEEGG
T ss_pred hhhc-----CcHHHHHHHHHHHHcCCceEEECCCCC-CCCCCCcccccCCcchHHHHHHhchhccCceEEEecceEEecc
Confidence 3333 355533 43 45689999999999974 322 11 22333 34455678888777665543321
Q ss_pred --CCC--cccCCCCccCCccchHHHHHHHHcCCch
Q 016934 248 --DSR--DIDCNDSKERGQVSSTRVRQALAMGDMK 278 (380)
Q Consensus 248 --~~~--~~~~~~~~~~~~ISST~IR~~L~~GdI~ 278 (380)
... .+-|-...+...||+|+||++|.+|..-
T Consensus 336 ~~~~~~~~~~p~~~~~~~~iSGT~~R~~L~~G~~p 370 (395)
T 1r6x_A 336 EDRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEI 370 (395)
T ss_dssp GTEEEETTTSCSSSCCCBCCCHHHHHHHHHHTCCC
T ss_pred cCeEEEcccCCCCccceEccCHHHHHHHHHCcCCC
Confidence 111 1123222345689999999999999853
No 47
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=96.71 E-value=0.021 Score=59.17 Aligned_cols=162 Identities=20% Similarity=0.255 Sum_probs=94.1
Q ss_pred ceEEEEeecCccCHHHHHHHHHH-HHhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCCc--cCeEEE--Eecc
Q 016934 105 GGIVALGKFDALHIGHRELAIQA-SKIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPY--CGNVAP--VEFQ 179 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A-~~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~--vD~vv~--~~F~ 179 (380)
..|+++..++.+|+||.+++.++ .+.+.-+++.+ +..+. .+--++..-|.+.++.+-.. -+.+++ +|+.
T Consensus 189 ~~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~p-----l~g~~-k~~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~~ 262 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHP-----VVGLT-KPGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLA 262 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEE-----BCSBC-STTCCCHHHHHHHHHHHGGGSCTTSEEECCBCCB
T ss_pred CcEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEE-----CCCCC-CCCCCCHHHHHHHHHHHHHhCCcccEEEEecchh
Confidence 47899999999999997777665 44443334433 22221 11235666676655443211 244554 5554
Q ss_pred ccccccCCCCHHHHH-HH-HHHhhCccEEEEcCCCCCCCC---------CCCCHHH-HHHHHhhcCcEEEEEcceeccCC
Q 016934 180 IQFSSVRHLSPQQFV-EK-LSRELGVRGVVAGENYRFGYK---------AAGDASE-LVRLCEEYGMDACIINSVMDKHQ 247 (380)
Q Consensus 180 ~~Fa~i~~ls~e~Fi-e~-L~~~L~vk~IVVG~DFrFG~~---------r~Gd~~~-Lk~l~~~~G~~v~iV~~v~~~~~ 247 (380)
..++ -|.+=+ +- +-+++++.+++||.|.- |-+ ...++.. +.++..+.|++....+...+...
T Consensus 263 m~ya-----Gprea~~hai~r~n~G~th~IvGrdhA-g~g~~~~~~~~Y~~~~aq~i~~~~~~~l~i~pv~fd~~~y~~~ 336 (511)
T 1g8f_A 263 MRMS-----GDREAVWHAIIRKNYGASHFIVGRDHA-GPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPD 336 (511)
T ss_dssp CCCC-----HHHHHHHHHHHHHHTTCSEEECCTTTT-CCCBCTTSCBSSCTTHHHHHHHHTHHHHCSEEECCCCEEEEGG
T ss_pred hhcc-----CcHHHHHHHHHHHhCCCceEEeCCCCC-CCCCCCcccccCCcchHHHHHHhCccccCceEEeecceeEecc
Confidence 4444 355533 43 45689999999999974 322 1123333 33444567888777766654321
Q ss_pred CC----CcccCCCCccCCccchHHHHHHHHcCCch
Q 016934 248 DS----RDIDCNDSKERGQVSSTRVRQALAMGDMK 278 (380)
Q Consensus 248 ~~----~~~~~~~~~~~~~ISST~IR~~L~~GdI~ 278 (380)
-. ..+-|....+...||.|.||+.|..|.--
T Consensus 337 ~g~~i~~d~~p~~~~~~~~iSgt~IR~~Lr~G~~~ 371 (511)
T 1g8f_A 337 EDRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEI 371 (511)
T ss_dssp GTEEEEGGGCSSSCCCCBCCCHHHHHHHHHHTCCC
T ss_pred cCeEEEcccCCCCcccccccCHHHHHHHHhCCCCC
Confidence 00 11112222334689999999999999854
No 48
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=96.59 E-value=0.018 Score=59.97 Aligned_cols=164 Identities=17% Similarity=0.198 Sum_probs=86.2
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHH-hCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCCc---cCeEEEEeccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASK-IGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPY---CGNVAPVEFQI 180 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~-~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~---vD~vv~~~F~~ 180 (380)
..|+++=.+..+|+||..|+++|.+ .+..++|.+ +..+. ...-++.+-|.+.++.+-.. -+.+++..|..
T Consensus 164 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p-----~~g~~-k~~di~~~~R~~~~~~~~~~~~p~~~v~~~~~p~ 237 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHP-----VVGLT-KPGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPL 237 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECC-----BCSBC-CTTSCCHHHHHHHHHHHHHHHSCTTTEEECBBCC
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEe-----CcCCC-CCCCCCHHHHHHHHHHHHHhcCCCCcEEEeecCc
Confidence 5789999999999999999999876 343333322 11111 11235677787776665111 14455444432
Q ss_pred cccccCCCCHHHHH-HH-HHHhhCccEEEEcCCCCCCCCC---------CCCHH-HHHHHHhhcCcEEEEEcceeccCCC
Q 016934 181 QFSSVRHLSPQQFV-EK-LSRELGVRGVVAGENYRFGYKA---------AGDAS-ELVRLCEEYGMDACIINSVMDKHQD 248 (380)
Q Consensus 181 ~Fa~i~~ls~e~Fi-e~-L~~~L~vk~IVVG~DFrFG~~r---------~Gd~~-~Lk~l~~~~G~~v~iV~~v~~~~~~ 248 (380)
... --.|++=+ .- +.+++++.+++||.|.- |-+. ..++. .+.++..+.|++....+...+...-
T Consensus 238 ~m~---~agprea~~ha~ir~n~G~th~ivgrdha-g~g~~~~~~~~Y~~~~a~~~~~~~~~~lgi~~v~fd~~~y~~~~ 313 (546)
T 2gks_A 238 AMR---MAGPREALWHGIIRRNYGATHFIVGRDHA-SPGKDSKGKPFYDPYEAQELFKKYEDEIGIKMVPFEELVYVPEL 313 (546)
T ss_dssp BCC---CCTHHHHHHHHHHHHHTTCSEEEECTTTT-CCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCCEEETTT
T ss_pred hhh---ccCchHHHHHHHHHHhCCCCeEEECCCCC-CCCCCCCCcccCCcchHHHHHHhcccccCceEEeccceEEEcCC
Confidence 211 23455533 33 45789999999998763 3221 11222 2344555689888776665543210
Q ss_pred C----CcccCCCCccCCccchHHHHHH-HHcCCch
Q 016934 249 S----RDIDCNDSKERGQVSSTRVRQA-LAMGDMK 278 (380)
Q Consensus 249 ~----~~~~~~~~~~~~~ISST~IR~~-L~~GdI~ 278 (380)
. .++-|........||.|.||+. |..|.--
T Consensus 314 g~~i~id~~~~~~~~~~~iSgt~iR~~~L~~g~~~ 348 (546)
T 2gks_A 314 DQYVEINEAKKRNLKYINISGTEIRENFLKQGRKL 348 (546)
T ss_dssp TEEECSCC---------------CTHHHHTTTCCC
T ss_pred CeEEeeeccCCCCceeeecchhhhhhhhhcCCCCC
Confidence 0 1111111223457999999999 9988754
No 49
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=96.02 E-value=0.06 Score=51.96 Aligned_cols=122 Identities=18% Similarity=0.196 Sum_probs=69.0
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCEEE-eecCcccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEe----cc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPYLL-SFIGMAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVE----FQ 179 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~Vv-tF~~P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~----F~ 179 (380)
-|=|+| .+|-||..|+++|++ +..+|+ .|.+|..+-..+- ...--+.+.=.++|+..| ||.++.-. |-
T Consensus 29 ~VPTMG---aLH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~g--vD~vF~P~~~emYP 102 (285)
T 3mxt_A 29 YVPTMG---FLHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNG--VDMVFIPDATQMYL 102 (285)
T ss_dssp EEEECS---SCCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHTT--CSEEECCCHHHHSC
T ss_pred EEcCCC---cccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHCC--CCEEECCCHHHcCC
Confidence 344777 499999999999999 776665 4667765322111 111224454567889988 88665421 11
Q ss_pred ccccc---cCCCC--------HHHH------HHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEE
Q 016934 180 IQFSS---VRHLS--------PQQF------VEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACII 239 (380)
Q Consensus 180 ~~Fa~---i~~ls--------~e~F------ie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV 239 (380)
..+.. +..++ |--| +.+|..-..++..+-|+ |-.--...++++.+.+++.+.|+
T Consensus 103 ~g~~t~v~~~~l~~~LeG~~RPgHF~GV~TVV~KLfniv~Pd~A~FGe------KD~QQl~vIrrmV~DL~~pv~Iv 173 (285)
T 3mxt_A 103 KNFSTYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQ------KDAQQCVVVRHMVDDLNFDLKIQ 173 (285)
T ss_dssp TTCCCCCCCSSSTTSHHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEG------GGHHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCeeEEEcCCccccccCCCCCchhhhHHHHHHHHHhhcCCCEeEEcc------hHHHHHHHHHHHHHHcCCCceEE
Confidence 11111 11122 1112 23455555888877654 32223445588888888766665
No 50
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=95.95 E-value=0.15 Score=53.31 Aligned_cols=162 Identities=20% Similarity=0.283 Sum_probs=91.4
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh-CCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCCc--cCeEEEEecccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI-GAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPY--CGNVAPVEFQIQ 181 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~-g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~--vD~vv~~~F~~~ 181 (380)
..|+++=.+..+|+||..|+++|.+. +.-++|.. +..+. ...-++..-|.+.++.+-.. =+.+++..|...
T Consensus 191 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p-----l~g~~-k~~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~ 264 (573)
T 1m8p_A 191 SRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHP-----VVGLT-KPGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLA 264 (573)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECC-----BCCCC-CTTCHHHHHHHHHHHHHGGGSSTTSEEECBBCCC
T ss_pred CeEEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEe-----CCCCC-CCCCCCHHHHHHHHHHHHHhCCCCcEEEEecCch
Confidence 57899999999999999999998765 43233322 11111 11124566677776664110 134444433221
Q ss_pred ccccCCCCHHHH-HHH-HHHhhCccEEEEcCCCCCCCCC---------CCCHH-HHHHHHhhcCcEEEEEcceeccCCC-
Q 016934 182 FSSVRHLSPQQF-VEK-LSRELGVRGVVAGENYRFGYKA---------AGDAS-ELVRLCEEYGMDACIINSVMDKHQD- 248 (380)
Q Consensus 182 Fa~i~~ls~e~F-ie~-L~~~L~vk~IVVG~DFrFG~~r---------~Gd~~-~Lk~l~~~~G~~v~iV~~v~~~~~~- 248 (380)
.. --.|.+= ..- +.+++++.+++||.|.- |-+. ..++. .+.++....|++...++...+...-
T Consensus 265 m~---~agprea~~ha~ir~n~G~th~ivgrdha-g~g~~~~~~~~Y~~~~a~~i~~~~~~~l~i~~v~fd~~~y~~~~g 340 (573)
T 1m8p_A 265 MR---MGGPREAIWHAIIRKNHGATHFIVGRDHA-GPGSNSKGEDFYGPYDAQHAVEKYKDELGIEVVEFQMVTYLPDTD 340 (573)
T ss_dssp CC---CCHHHHHHHHHHHHHHHTCSEEEECTTTT-CCCCCTTCCCSSCTTHHHHHHHHHHHHHCCEEEECCCCCBBTTTT
T ss_pred hh---ccCchHHHHHHHHHHHCCCCeEEECCCCC-CCCCCCCCcccCCcchHHHHHHhhhhhcCceeEeccceEEEcCCC
Confidence 11 1245553 233 56789999999998752 2210 11222 2344555788888777765543221
Q ss_pred -CCccc-CCCCccCCccchHHHHHHHHcCC
Q 016934 249 -SRDID-CNDSKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 249 -~~~~~-~~~~~~~~~ISST~IR~~L~~Gd 276 (380)
....+ ++.......||.|.||+.+..|.
T Consensus 341 ~~i~id~~~~~~~~~~iSgt~ir~~l~~g~ 370 (573)
T 1m8p_A 341 EYRPVDQVPAGVKTLNISGTELRRRLRSGA 370 (573)
T ss_dssp BCCCSSSSCTTSCCBCCCHHHHHHHHHHTC
T ss_pred cEEecccCCCCceeecCChHHHHHHHhccC
Confidence 01111 11123345799999999999764
No 51
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=95.69 E-value=0.13 Score=54.56 Aligned_cols=163 Identities=15% Similarity=0.170 Sum_probs=94.6
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh----CC--C-EEEeecCcccccccCCCCCCCChHHHHHHHHhcCC--c--cCeE
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI----GA--P-YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAP--Y--CGNV 173 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~----g~--~-~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~--~--vD~v 173 (380)
..|+++=.-+.+|+||.+|++.|.+. |. + ++|.+ +..+. .+--++..-|.+..+.+-. + -+.+
T Consensus 413 ~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~p-----l~G~t-k~~di~~~~r~~~~~~~~~~~y~p~~~~ 486 (630)
T 1x6v_B 413 DAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHP-----LGGWT-KDDDVPLMWRMKQHAAVLEEGVLNPETT 486 (630)
T ss_dssp SEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEE-----BCSCC-CTTSCCHHHHHHHHHHHHHTTSSCGGGE
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEe-----CcCCC-CCCCCCHHHHHHHHHHHHHcCCCCCcce
Confidence 57899999999999999999887642 32 2 23333 22221 1223566666654433210 1 2455
Q ss_pred EEEeccccccccCCCCHHHHH-HH-HHHhhCccEEEEcCCCCCCCC------CC---CCHHHHHHHH-hhcCcEEEEEcc
Q 016934 174 APVEFQIQFSSVRHLSPQQFV-EK-LSRELGVRGVVAGENYRFGYK------AA---GDASELVRLC-EEYGMDACIINS 241 (380)
Q Consensus 174 v~~~F~~~Fa~i~~ls~e~Fi-e~-L~~~L~vk~IVVG~DFrFG~~------r~---Gd~~~Lk~l~-~~~G~~v~iV~~ 241 (380)
++..|...+- ---|.+=+ .- +-+++|+.++|||.|.- |-+ .- .++..+-+.. .+.|+++..++.
T Consensus 487 ~l~~~p~~mr---yaGPrEa~~hai~rkN~Gcth~IVGrdhA-G~g~~~~~~~~Y~~~~aq~i~~~~~~~l~i~~~~~~~ 562 (630)
T 1x6v_B 487 VVAIFPSPMM---YAGPTEVQWHCRARMVAGANFYIVGRDPA-GMPHPETGKDLYEPSHGAKVLTMAPGLITLEIVPFRV 562 (630)
T ss_dssp EECCBCCCCC---CCHHHHHHHHHHHHHHTTCSEEEECSSTT-CCBCTTTCSBSSCTTHHHHHHHHCTTCTTCEEEECCC
T ss_pred EEeeccchhh---hcCcHHHHHHHHHHHhCCCCeEEECCCCC-CCCCCCCccccCCcchHHHHHhcCcccCCceEEEcce
Confidence 6544433221 12455544 43 45689999999999984 433 11 2344444443 357888777665
Q ss_pred eeccCCC--CCcccCCCCccCCccchHHHHHHHHcCCc
Q 016934 242 VMDKHQD--SRDIDCNDSKERGQVSSTRVRQALAMGDM 277 (380)
Q Consensus 242 v~~~~~~--~~~~~~~~~~~~~~ISST~IR~~L~~GdI 277 (380)
..+-.+- ..+..|....+-..||.|++|++|.+|..
T Consensus 563 ~~Y~~~~~~~~~~~p~~~~~~~~isgt~~R~~l~~G~~ 600 (630)
T 1x6v_B 563 AAYNKKKKRMDYYDSEHHEDFEFISGTRMRKLAREGQK 600 (630)
T ss_dssp EEEETTTTEEEECCSTTGGGEECCCHHHHHHHHHTTCC
T ss_pred eEEEcccCceeccCCCCCceeeecCHHHHHHHHHCCCC
Confidence 5443221 12223433334457999999999999985
No 52
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=93.83 E-value=0.049 Score=52.62 Aligned_cols=121 Identities=20% Similarity=0.223 Sum_probs=68.0
Q ss_pred EEeecCccCHHHHHHHHHHHHhCCCEEE-eecCcccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEe----ccccc
Q 016934 109 ALGKFDALHIGHRELAIQASKIGAPYLL-SFIGMAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVE----FQIQF 182 (380)
Q Consensus 109 tIG~FDGvHlGHq~LI~~A~~~g~~~Vv-tF~~P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~----F~~~F 182 (380)
|+|. +|-||..|+++|++.+..+|+ .|.+|..+-..+- ...--+.+.=.++|+..| ||.++.-. |-..+
T Consensus 32 TMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~l~~~g--vd~vF~P~~~emYP~g~ 106 (287)
T 3q12_A 32 TMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRHG--ADLVFAPAAADIYPAGL 106 (287)
T ss_dssp ECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHHT--CSEEECCCHHHHSTTCS
T ss_pred CCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhcCCCCHHHHHHHHHHCC--CCEEECCChHhcCCCCC
Confidence 8885 999999999999998877655 4667764321100 011124444467888888 78655311 11111
Q ss_pred c--c---cCCCC--------HHHH------HHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEc
Q 016934 183 S--S---VRHLS--------PQQF------VEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIIN 240 (380)
Q Consensus 183 a--~---i~~ls--------~e~F------ie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~ 240 (380)
. . +..++ |--| +.+|..-..++..+-|+ |-.--...++++.+.+++.+.|+.
T Consensus 107 ~~~t~v~~~~l~~~LeG~~RPgHF~GV~TVV~KLfniv~Pd~A~FGe------KD~QQl~vIrrmV~DL~~pv~Iv~ 177 (287)
T 3q12_A 107 EKQTYVDVPALSTILEGASRPGHFRGVSTIVSKLFNLIQPDVACFGE------KDYQQLALIRKMVADMGYDINIVG 177 (287)
T ss_dssp TTCCEEECTTTSSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEET------TSHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CceeEEecCCccccccCCCCcchhhhHHHHHHHHHhccCCCeeEEch------hHHHHHHHHHHHHHHcCCCceEEE
Confidence 1 0 00111 1123 23345555788777654 322234445888888887766653
No 53
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=93.43 E-value=0.44 Score=49.68 Aligned_cols=160 Identities=12% Similarity=0.113 Sum_probs=87.3
Q ss_pred ceEEEEeecCccCHHHHHHHHHHH-HhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCC-c-cCeEE--EEecc
Q 016934 105 GGIVALGKFDALHIGHRELAIQAS-KIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAP-Y-CGNVA--PVEFQ 179 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~-~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~-~-vD~vv--~~~F~ 179 (380)
..|+++=.-+.+|++|.+++++|. +.+.-+++.+ +..+. .+--++..-|.+.++.+-. + -+.++ ++|+.
T Consensus 164 ~~v~afqtrnp~Hrah~~~~~~~~~~~~~~lll~p-----l~g~~-k~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~ 237 (552)
T 3cr8_A 164 RRIIAWQARQPMHRAQYEFCLKSAIENEANLLLHP-----QVGGD-ITEAPAYFGLVRSFLAIRDRFPAATTQLSLLPAP 237 (552)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECC-----BCCCC-TTTCTTHHHHHHHHHHHGGGSCGGGEEECBBCSC
T ss_pred CceEEEecCCCCchHHHHHHHHHHHhcCCeEEEEe-----ccCCC-CCCCCCHHHHHHHHHHHHHhCCCccEEEeecchh
Confidence 578999999999999999999987 4443233332 22221 1223455666655444321 1 24445 45555
Q ss_pred ccccccCCCCHHHH-HHH-HHHhhCccEEEEcCCCCCCCC--CCC-------CHH-HHHHHHhhcCcEEEEEcceeccCC
Q 016934 180 IQFSSVRHLSPQQF-VEK-LSRELGVRGVVAGENYRFGYK--AAG-------DAS-ELVRLCEEYGMDACIINSVMDKHQ 247 (380)
Q Consensus 180 ~~Fa~i~~ls~e~F-ie~-L~~~L~vk~IVVG~DFrFG~~--r~G-------d~~-~Lk~l~~~~G~~v~iV~~v~~~~~ 247 (380)
..++ -|.+= +.- +-+++|+.+++||.|.- |-+ ..| ++. .+.++..+.|++....+...+...
T Consensus 238 m~~a-----gprea~~ha~~r~n~G~th~ivGrdha-g~g~~~~~~~~Y~~~~a~~i~~~~~~~l~i~pv~f~~~~y~~~ 311 (552)
T 3cr8_A 238 PPEA-----SGRALLLRAIVARNFGCSLLIAGGEHQ-PDGGDCRRGEDLTQNRVDPSVAERAEKIGVRLIAYPRMVYVED 311 (552)
T ss_dssp CCCS-----CSHHHHHHHHHHHHHTCSEEEC-----------------------CCSSHHHHHHHTCEEECCCCEEEEGG
T ss_pred hccc-----CcHHHHHHHHHHHhCCCCeeeeCCCCC-CCCCCCCccccCCcchHHHHHHhhhhhcCCeeeeccceEEecC
Confidence 4444 35553 344 45689999999999874 322 010 111 123444567888877776654321
Q ss_pred --CC--CcccCCCCccCCccchHHHHHHHHcCCc
Q 016934 248 --DS--RDIDCNDSKERGQVSSTRVRQALAMGDM 277 (380)
Q Consensus 248 --~~--~~~~~~~~~~~~~ISST~IR~~L~~GdI 277 (380)
.. ..+-|. ......+|.|.||+.|..|.-
T Consensus 312 ~g~~~~~d~~~~-~~~~~~isgt~ir~~Lr~G~~ 344 (552)
T 3cr8_A 312 RAEHLPEAEAPQ-GARLLTLSGEEFQRRMRAGLK 344 (552)
T ss_dssp GTEEEEGGGSCT-TCCEECCCHHHHHHHHTTTCC
T ss_pred CCeEEecccCCC-CcccccCCHHHHHHHHhcCCC
Confidence 00 111122 234467999999999999964
No 54
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=92.93 E-value=0.097 Score=49.95 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=81.4
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCEEE-eecCcccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEe----cc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPYLL-SFIGMAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVE----FQ 179 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~Vv-tF~~P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~----F~ 179 (380)
-|=|+| .+|-||..|+++|++.+..+|+ .|.+|..+-..+- ...--+.++=.++|+..| ||.++.-. |-
T Consensus 28 ~VPTMG---aLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~g--vD~vF~P~~~emYP 102 (264)
T 3n8h_A 28 FVPTMG---ALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASLD--VDVLFNPSEKDIYP 102 (264)
T ss_dssp EEEECS---SCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHTT--CSEEECCCHHHHCT
T ss_pred EECCCc---chhHHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhhcCCCCHHHHHHHHHHCC--CCEEECCCHHHcCC
Confidence 445566 7999999999999998877655 4666764321100 011124444467888888 78655311 11
Q ss_pred ccccc--c------CCCCH----HHH------HHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEE--
Q 016934 180 IQFSS--V------RHLSP----QQF------VEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACII-- 239 (380)
Q Consensus 180 ~~Fa~--i------~~ls~----e~F------ie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV-- 239 (380)
..+.. + ..|.. --| +.+|..-..++..+-|+ |-.--...++++.+.+++.+.|+
T Consensus 103 ~g~~t~~v~~~~l~~~LeG~~RPgHF~GV~TVV~KLfniv~Pd~A~FGe------KD~QQl~vIrrmV~DL~~pv~Iv~~ 176 (264)
T 3n8h_A 103 DGNLLRIEPKLEIANILEGKSRPGHFSGMLTVVLKLLQITKPNNLYLGE------KDYQQVMLIKQLVKDFFINTKIIVC 176 (264)
T ss_dssp TCSCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEET------TSHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCceEEEeCCccccccCCCCCccHHHHHHHHHHHHHhhcCCCeEEEch------hHHHHHHHHHHHHHHhCCCceEEEE
Confidence 11110 0 01111 112 22344455777777654 32223445588888888777665
Q ss_pred cceeccCC-CCCcccCCCCccCCccchHHHHHHHHcCC
Q 016934 240 NSVMDKHQ-DSRDIDCNDSKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 240 ~~v~~~~~-~~~~~~~~~~~~~~~ISST~IR~~L~~Gd 276 (380)
|.+...+. .-+++|--++ ..++-....|-++|..+.
T Consensus 177 PtvRe~DGLA~SSRN~yLs-~~eR~~A~~L~~aL~~a~ 213 (264)
T 3n8h_A 177 PTQRQPSGLPLSSRNKNLT-STDIEIANKIYEILRQDD 213 (264)
T ss_dssp CCCBCTTSCBCCGGGGGCC-HHHHHHHHHHHHHHHTCC
T ss_pred CceECCCCChhhhhcccCC-HHHHHHHHHHHHHHHHHH
Confidence 33322210 0011111111 123344556667777775
No 55
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=70.27 E-value=11 Score=32.36 Aligned_cols=65 Identities=11% Similarity=0.172 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHH------HHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccc
Q 016934 191 QQFVEKLSRELGVRGVVAGENYRFGYKAAGDASE------LVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVS 264 (380)
Q Consensus 191 e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~------Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~IS 264 (380)
.+.+..|+++.++..+|||.-+. .++...... ...+.+++++.|..++ ++-|
T Consensus 44 ~~~l~~li~~~~~~~ivVGlP~~--~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vD--------------------Er~T 101 (150)
T 1vhx_A 44 LSRLSELIKDYTIDKIVLGFPKN--MNGTVGPRGEASQTFAKVLETTYNVPVVLWD--------------------ERLT 101 (150)
T ss_dssp HHHHHHHHTTSEEEEEEEECCCC--BTTBCCHHHHHHHHHHHHHHHHHCSCEEEEC--------------------CSSC
T ss_pred HHHHHHHHHHcCCCEEEEeeeec--CCcchhHHHHHHHHHHHHHHHhhCCCEEEec--------------------CCCC
Confidence 35567788999999999998853 344444433 2244455677776663 6789
Q ss_pred hHHHHHHHHcCCc
Q 016934 265 STRVRQALAMGDM 277 (380)
Q Consensus 265 ST~IR~~L~~GdI 277 (380)
|..+++.+.+..+
T Consensus 102 s~~Ak~~l~~~g~ 114 (150)
T 1vhx_A 102 TMAAEKMLIAADV 114 (150)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 9999999876554
No 56
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=48.89 E-value=63 Score=25.68 Aligned_cols=48 Identities=17% Similarity=0.177 Sum_probs=28.8
Q ss_pred HHHHHHHHhhCccEEEEcCCCC----CCCCCCCCHHHHHHHHhhcCcEEEEEc
Q 016934 192 QFVEKLSRELGVRGVVAGENYR----FGYKAAGDASELVRLCEEYGMDACIIN 240 (380)
Q Consensus 192 ~Fie~L~~~L~vk~IVVG~DFr----FG~~r~Gd~~~Lk~l~~~~G~~v~iV~ 240 (380)
+.+..++++.++..||||.-.. -|....---+..+++.+. +++|..++
T Consensus 41 ~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~D 92 (98)
T 1iv0_A 41 EALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEVELWD 92 (98)
T ss_dssp HHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 3456678889999999995433 333222222334445445 77776664
No 57
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=39.10 E-value=89 Score=30.06 Aligned_cols=57 Identities=11% Similarity=0.183 Sum_probs=37.2
Q ss_pred hHHHHHHHHhcCCccCeEEEEeccccccc-cCCCCHHHHHHH---HHHhhCccEEEEcCCCCCCC
Q 016934 156 KCDRKRVLSSWAPYCGNVAPVEFQIQFSS-VRHLSPQQFVEK---LSRELGVRGVVAGENYRFGY 216 (380)
Q Consensus 156 ~~~R~~lL~~lg~~vD~vv~~~F~~~Fa~-i~~ls~e~Fie~---L~~~L~vk~IVVG~DFrFG~ 216 (380)
+.+.++.|...| -|+-+.|...|-. -.+-+.+++++. +++..++++|.+|.||-||.
T Consensus 194 ~De~irala~~G----Gvigv~~~~~fl~~~~~~t~~~~~~hi~~i~~~~G~dhVgiGsDf~~~~ 254 (325)
T 2i5g_A 194 SDEELKFIADHG----GFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMNIVGEDAIGIGTDFTQGH 254 (325)
T ss_dssp CHHHHHHHHHTT----CEEEECCCGGGSSSGGGCBHHHHHHHHHHHHHHHCTTSEEECCCBCTTC
T ss_pred CHHHHHHHHHcC----CeEEEeecchhcCCCCCCCHHHHHHHHHHHHHhcCCceEEECCcCcccc
Confidence 445567777766 2344455444431 114578888875 56778999999999997653
No 58
>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}
Probab=33.11 E-value=1e+02 Score=25.31 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=42.3
Q ss_pred CCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchHHHHHHHHcCCchhhhhhcce
Q 016934 217 KAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSSTRVRQALAMGDMKYVSELLGR 286 (380)
Q Consensus 217 ~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST~IR~~L~~GdI~~An~LLGr 286 (380)
+..-+++.|+++-...|-+|..-.|.......+. -.|-+..+-..|++|.||.+++++-+-....+|.-
T Consensus 27 ds~~d~d~L~~lI~~nGG~Vl~~lP~~s~~~~yV-VSpyN~t~LpTVtpTYI~aC~~~nTLLnv~~YLvp 95 (106)
T 2l42_A 27 DSLNDIDQLARLIRANGGEVLDSKPRESKENVFI-VSPYNHTNLPTVTPTYIKACCQSNSLLNMENYLVP 95 (106)
T ss_dssp SCSSTHHHHHHHHHTTTSCCCEECCCCCSSCCCC-BCTTCCCSSSBCCTTHHHHHHHSTTSCGGGGCCBC
T ss_pred hhhhHHHHHHHHHHhcCcEEhhhCcccccCCeEE-EeCCCCCCCccccHHHHHHHHhcCceecccccccC
Confidence 3456889999998888877644333211100110 01111222357999999999999988777776653
No 59
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=28.33 E-value=2.1e+02 Score=24.26 Aligned_cols=47 Identities=15% Similarity=0.147 Sum_probs=32.5
Q ss_pred CCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchHHHHHHHHcCCc
Q 016934 215 GYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSSTRVRQALAMGDM 277 (380)
Q Consensus 215 G~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST~IR~~L~~GdI 277 (380)
++.+.-+.+.++++.++.||++..+..+... ..+.....+.++.|.+
T Consensus 172 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~----------------p~~~~~~~~~~~~~~~ 218 (250)
T 2p7i_A 172 GHRCTYALDTLERDASRAGLQVTYRSGIFFK----------------ALANFQWDQILQTDIL 218 (250)
T ss_dssp TCCCCCCHHHHHHHHHHTTCEEEEEEEEEEC----------------CSCHHHHHHHHHTTSS
T ss_pred cccccCCHHHHHHHHHHCCCeEEEEeeeEec----------------CCchHHHHHhhhcchh
Confidence 3334568899999999999998877655432 3445555666676665
No 60
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=26.91 E-value=2.4e+02 Score=26.99 Aligned_cols=81 Identities=12% Similarity=0.153 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHhhCccEEEEcC-----CCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcc--------cC
Q 016934 188 LSPQQFVEKLSRELGVRGVVAGE-----NYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDI--------DC 254 (380)
Q Consensus 188 ls~e~Fie~L~~~L~vk~IVVG~-----DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~--------~~ 254 (380)
++|++-.+ .+++++++.+.+.- -|.|..+-.-|++.|+++.+... +|.+.-++ ++..+ -.
T Consensus 153 T~Peea~~-Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~-----vpLVlHGg-Ssv~~~~~~~~~~~g 225 (305)
T 1rvg_A 153 TNPEEARI-FMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP-----APLVLHGA-SAVPPELVERFRASG 225 (305)
T ss_dssp CCHHHHHH-HHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC-----SCEEECSC-CCCCHHHHHHHHHTT
T ss_pred CCHHHHHH-HHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcC-----CCEEEeCC-CCCcHHHHHHHHhhc
Confidence 67888544 56778999998875 35553345678999999988754 44444332 10000 00
Q ss_pred CCCccCCccchHHHHHHHHcC
Q 016934 255 NDSKERGQVSSTRVRQALAMG 275 (380)
Q Consensus 255 ~~~~~~~~ISST~IR~~L~~G 275 (380)
+.-.+..-++-..||++++.|
T Consensus 226 g~~~~~~G~p~e~i~~ai~~G 246 (305)
T 1rvg_A 226 GEIGEAAGIHPEDIKKAISLG 246 (305)
T ss_dssp CCCCSCBCCCHHHHHHHHHTT
T ss_pred cccccCCCCCHHHHHHHHHCC
Confidence 111112268888999999987
No 61
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=22.94 E-value=3.5e+02 Score=25.81 Aligned_cols=163 Identities=18% Similarity=0.195 Sum_probs=84.2
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCcccccCccccccCCCCCCCCCCCCCCc-eEEEEeecCcc-CHHHHHHH--HHH-HHh
Q 016934 56 NRKQRLQQRLVSSSSLQSKSPGEMPTLPSCFSEREDDRELPAEGFSPVAG-GIVALGKFDAL-HIGHRELA--IQA-SKI 130 (380)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vvtIG~FDGv-HlGHq~LI--~~A-~~~ 130 (380)
+-.+.|-+++-...+.+- .++-...||-.|-.-++ ...++| -|+.|...... .---.+|+ ..| ++.
T Consensus 14 ~~~~~La~~ia~~lg~~l-----~~~~~~~F~dGE~~v~i----~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~a 84 (319)
T 3dah_A 14 NANPALAQEVVKILGIPL-----GKAMVSRFSDGEIQVEI----QENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRA 84 (319)
T ss_dssp SSCHHHHHHHHHHHTSCC-----CCEEEEECTTSCEEEEE----CSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhCCce-----eeeEEEECCCCCEEEEE----CCCcCCCeEEEEccCCCCCcHHHHHHHHHHHHHHHc
Confidence 334556666655554432 13344566644443333 234554 46667665443 22223333 233 444
Q ss_pred CCC---EEEeecCcccc-cccCC-CCCCCChHHHHHHHHhcCCccCeEEEEec---------cccccccCCCCHHHHH-H
Q 016934 131 GAP---YLLSFIGMAEV-FGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVEF---------QIQFSSVRHLSPQQFV-E 195 (380)
Q Consensus 131 g~~---~VvtF~~P~~v-l~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~F---------~~~Fa~i~~ls~e~Fi-e 195 (380)
+.. +|+.|.+-++- -...+ +.| ++..--.++|+..| +|.++.++. +... .++.+...+ +
T Consensus 85 sA~rIt~ViPY~~YaRQDr~~~~~r~p-isak~vA~ll~~~G--~d~vit~DlH~~qiqgfF~ipv---d~l~a~p~l~~ 158 (319)
T 3dah_A 85 SAGRITAAIPYFGYARQDRRPRSARVA-ISAKVVANMLEIAG--VERIITMDLHADQIQGFFDIPV---DNIYATPILLG 158 (319)
T ss_dssp TBSEEEEEESSCTTTTCCSCCTTCCCC-CHHHHHHHHHHHHT--CCEEEEESCSCGGGGGGCSSCE---EEECCHHHHHH
T ss_pred CCcEEEEEccCccccccccccCCCCCC-ccHHHHHHHHHhcC--CCEEEEEECCChHHhhhcCCce---EecccHHHHHH
Confidence 443 34544441110 00112 222 23333457898888 899988763 2222 256655544 4
Q ss_pred HHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEc
Q 016934 196 KLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIIN 240 (380)
Q Consensus 196 ~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~ 240 (380)
.+.+..--.-+|||-| .|.+..-..+++++|..+.++.
T Consensus 159 ~i~~~~~~~~vVVspd-------~Ggv~~A~~lA~~L~~p~~~i~ 196 (319)
T 3dah_A 159 DLRKQNYPDLLVVSPD-------VGGVVRARALAKQLNCDLAIID 196 (319)
T ss_dssp HHHTTCCTTEEEECCS-------STTHHHHHHHHHHTTCEEEC--
T ss_pred HHHHhCCCCcEEEEeC-------CCccHHHHHHHHHhCCCEEEEE
Confidence 4443222356888877 4678888889999998876664
No 62
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=22.61 E-value=1.4e+02 Score=25.63 Aligned_cols=54 Identities=15% Similarity=0.138 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHhhCccEEEEcCCCCC-----CCCCCCCHHHHHHHHhhcCcEEEEEcce
Q 016934 189 SPQQFVEKLSRELGVRGVVAGENYRF-----GYKAAGDASELVRLCEEYGMDACIINSV 242 (380)
Q Consensus 189 s~e~Fie~L~~~L~vk~IVVG~DFrF-----G~~r~Gd~~~Lk~l~~~~G~~v~iV~~v 242 (380)
....+++.+.+.|++...++-.+|.. |....-+.+.+.++.++.||++..+...
T Consensus 149 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 149 MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 45678887878888877776544432 2222347899999999999998777654
No 63
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=22.25 E-value=1.4e+02 Score=26.04 Aligned_cols=48 Identities=10% Similarity=0.253 Sum_probs=33.3
Q ss_pred EEEEcCC-CCCCCCCCC---CHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchHHHHHHHH
Q 016934 205 GVVAGEN-YRFGYKAAG---DASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSSTRVRQALA 273 (380)
Q Consensus 205 ~IVVG~D-FrFG~~r~G---d~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST~IR~~L~ 273 (380)
.+|+|.. |.--..|.| |++.|++..+++||+|.+.. ..+...|++.|+
T Consensus 46 ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~---------------------dlt~~em~~~l~ 97 (178)
T 2h54_A 46 ALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKK---------------------NLTASDMTTELE 97 (178)
T ss_dssp EEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEE---------------------SCCHHHHHHHHH
T ss_pred EEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCEEEEec---------------------CCCHHHHHHHHH
Confidence 5677764 432234555 77788888999999987653 256678888886
No 64
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=21.33 E-value=28 Score=29.50 Aligned_cols=47 Identities=13% Similarity=0.297 Sum_probs=28.6
Q ss_pred HHHHHHHHhhCccEEEEcCCCCCCCCCCCC------HHHHHHHHhhcCcEEEEEc
Q 016934 192 QFVEKLSRELGVRGVVAGENYRFGYKAAGD------ASELVRLCEEYGMDACIIN 240 (380)
Q Consensus 192 ~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd------~~~Lk~l~~~~G~~v~iV~ 240 (380)
+.+..++++.++..||||--... ++... -...+++.+.++++|..++
T Consensus 43 ~~l~~li~e~~v~~iVvGlP~~m--dGt~~~~~~~~~~f~~~L~~~~~lpV~~~D 95 (138)
T 1nu0_A 43 NIIERLLKEWQPDEIIVGLPLNM--DGTEQPLTARARKFANRIHGRFGVEVKLHD 95 (138)
T ss_dssp HHHHHHHHHHCCSEEEEEEEECT--TSCBCHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEecccCC--CcCcCHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 55777888899999999954322 11222 2223444455677777765
No 65
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=21.04 E-value=1.5e+02 Score=24.11 Aligned_cols=28 Identities=21% Similarity=0.239 Sum_probs=17.8
Q ss_pred hhcceeeeEEEEEeecccccccCCCcccCCCCCCCCCCCC
Q 016934 282 ELLGRQHRLILTVNDHDELISTSNKHRVSVPKSCLLNLPP 321 (380)
Q Consensus 282 ~LLGrpy~i~G~Vv~G~~~~~~~~Gr~lGfPTANl~~llP 321 (380)
.|+.||-- +.|. +..+||+.+.+..++|
T Consensus 89 ~likrPiv-----~~~~-------~~~vGf~~~~~~~~l~ 116 (132)
T 1z3e_A 89 GLLRRPII-----IDEK-------RLQVGYNEDEIRRFLP 116 (132)
T ss_dssp GGBCSCEE-----ECSS-------CEEESCCTTGGGGGSC
T ss_pred cceeCCEE-----EECC-------EEEEcCCHHHHHHHhC
Confidence 45677743 3343 3368999988875554
No 66
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=20.05 E-value=5.7e+02 Score=24.88 Aligned_cols=53 Identities=19% Similarity=0.272 Sum_probs=35.4
Q ss_pred HHHHHHHHhcCCccCeEEEEeccccccc-cCCCCHHHHHHH---HHHhhCccEEEEcCCCC
Q 016934 157 CDRKRVLSSWAPYCGNVAPVEFQIQFSS-VRHLSPQQFVEK---LSRELGVRGVVAGENYR 213 (380)
Q Consensus 157 ~~R~~lL~~lg~~vD~vv~~~F~~~Fa~-i~~ls~e~Fie~---L~~~L~vk~IVVG~DFr 213 (380)
.+.++.|...| -|+-+.|...|-. -.+-+.+++++. +.+..++++|-+|.||-
T Consensus 234 De~l~~la~~G----Gvigv~~~~~fl~~~~~~t~~~~~~hi~hi~~~~G~dhVgiGsDfd 290 (369)
T 1itu_A 234 DDVLRLVKQTD----SLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFD 290 (369)
T ss_dssp HHHHHHHHHHT----CEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECCCTT
T ss_pred HHHHHHHHHcC----CeEEEEechhhcCCCCCCCHHHHHHHHHHHHHhhCCCeEEECCCCC
Confidence 44566666665 2455666555531 123578888875 46677999999999993
Done!