Query 016934
Match_columns 380
No_of_seqs 176 out of 1587
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 06:13:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016934.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016934hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mrza2 c.26.1.3 (A:2-158) FMN 100.0 7.3E-40 5.3E-44 290.0 15.7 152 107-286 1-157 (157)
2 d1n08a_ b.43.5.1 (A:) Riboflav 99.9 9.6E-23 7E-27 179.2 8.7 85 285-377 13-110 (154)
3 d1nb9a_ b.43.5.1 (A:) Riboflav 99.8 5.3E-22 3.9E-26 173.3 7.7 84 287-377 4-100 (147)
4 d1mrza1 b.43.5.1 (A:159-288) R 99.8 1.6E-21 1.2E-25 167.0 7.5 82 288-377 2-94 (130)
5 d1coza_ c.26.1.2 (A:) CTP:glyc 99.6 1.3E-15 9.5E-20 127.9 8.7 123 105-272 2-126 (126)
6 d1f9aa_ c.26.1.3 (A:) Nicotina 99.4 1.2E-12 8.6E-17 111.0 12.3 135 107-276 3-137 (164)
7 d1lw7a1 c.26.1.3 (A:57-219) Tr 99.3 2.4E-13 1.7E-17 113.6 4.8 149 104-273 2-155 (163)
8 d1ej2a_ c.26.1.3 (A:) Nicotina 99.1 7.6E-11 5.5E-15 100.2 8.8 134 107-276 3-140 (167)
9 d1jhda2 c.26.1.5 (A:174-396) A 98.8 8.1E-08 5.9E-12 86.0 16.4 164 105-276 20-199 (223)
10 d1kama_ c.26.1.3 (A:) Nicotina 98.7 5.2E-08 3.8E-12 81.5 11.9 162 104-276 2-167 (189)
11 d1nuua_ c.26.1.3 (A:) Cytosoli 98.6 2.7E-08 2E-12 89.4 8.5 72 107-180 7-83 (233)
12 d1kr2a_ c.26.1.3 (A:) Nicotina 98.6 2.5E-07 1.8E-11 85.6 13.9 70 107-179 7-82 (271)
13 d1qjca_ c.26.1.3 (A:) Phosphop 98.6 2.9E-07 2.1E-11 75.6 12.2 29 106-134 2-30 (157)
14 d1o6ba_ c.26.1.3 (A:) Phosphop 98.6 2.1E-07 1.5E-11 77.6 11.1 55 106-166 3-57 (163)
15 d1od6a_ c.26.1.3 (A:) Phosphop 98.5 5.4E-07 4E-11 74.3 13.1 28 107-134 3-30 (160)
16 d1k4ma_ c.26.1.3 (A:) Nicotina 98.5 4.1E-07 3E-11 77.3 11.4 115 106-228 5-126 (213)
17 d1tfua_ c.26.1.3 (A:) Phosphop 98.5 1.1E-06 7.7E-11 72.4 13.6 34 105-138 2-35 (157)
18 d1vlha_ c.26.1.3 (A:) Phosphop 98.4 1.2E-06 8.6E-11 72.1 12.2 30 107-136 3-32 (157)
19 d1v47a2 c.26.1.5 (A:136-349) A 97.3 0.0036 2.6E-07 55.8 16.4 162 106-277 22-196 (214)
20 d1g8fa2 c.26.1.5 (A:169-389) A 97.3 0.0028 2.1E-07 56.7 15.0 162 105-276 21-201 (221)
21 d2a84a1 c.26.1.4 (A:3-288) Pan 96.4 0.01 7.4E-07 55.0 11.6 129 106-243 31-186 (286)
22 d1x6va2 c.26.1.5 (A:390-624) A 96.4 0.019 1.4E-06 51.6 12.9 162 105-277 24-211 (235)
23 d1ihoa_ c.26.1.4 (A:) Pantothe 95.3 0.051 3.7E-06 50.1 10.9 127 108-243 25-179 (282)
24 d1v8fa_ c.26.1.4 (A:) Pantothe 94.8 0.028 2E-06 51.7 7.5 127 108-243 20-173 (276)
25 g1sc3.1 c.17.1.1 (A:,B:) Inter 48.4 13 0.00091 31.8 5.9 50 204-274 40-93 (261)
26 d1yx1a1 c.1.15.7 (A:3-252) Hyp 42.7 52 0.0038 27.2 9.0 107 117-238 18-126 (250)
27 d1xxxa1 c.1.10.1 (A:5-300) Dih 34.4 69 0.005 27.3 8.7 105 121-238 31-138 (296)
28 d1iv0a_ c.55.3.8 (A:) Hypothet 33.4 72 0.0052 23.3 7.4 48 193-240 42-92 (98)
29 d1m65a_ c.6.3.1 (A:) Hypotheti 33.1 18 0.0013 28.7 4.2 67 190-280 172-238 (244)
30 d1vhxa_ c.55.3.8 (A:) Hypothet 32.1 38 0.0027 26.5 5.9 63 193-277 45-113 (140)
31 d2p7ia1 c.66.1.41 (A:22-246) H 28.0 76 0.0055 25.5 7.5 30 213-242 148-177 (225)
32 d1nu0a_ c.55.3.8 (A:) Hypothet 24.6 16 0.0012 28.8 2.2 48 193-241 44-96 (138)
33 d1o5ka_ c.1.10.1 (A:) Dihydrod 24.3 76 0.0055 26.8 7.0 126 118-273 22-153 (295)
34 d1xkya1 c.1.10.1 (A:1-292) Dih 23.7 1.9E+02 0.014 24.0 11.6 124 121-274 27-156 (292)
35 d1r9la_ c.94.1.1 (A:) Glycine 22.9 21 0.0015 30.6 2.8 39 223-282 25-63 (309)
No 1
>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=7.3e-40 Score=290.04 Aligned_cols=152 Identities=30% Similarity=0.479 Sum_probs=129.1
Q ss_pred EEEEeecCccCHHHHHHHHHHHHh----CCC-EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccc
Q 016934 107 IVALGKFDALHIGHRELAIQASKI----GAP-YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQ 181 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~----g~~-~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~ 181 (380)
|+|||+|||+|+|||+||++|++. +.+ +|+||++|.+++.++....+++.++|+++|+.+| +| ++++|+ +
T Consensus 1 VvtiG~FDGvH~GHq~li~~~~~~a~~~~~~~~v~tf~~~p~~~~~~~~~~l~~~~~k~~~l~~~g--~~--~~l~f~-~ 75 (157)
T d1mrza2 1 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA--RT--VVLDFF-R 75 (157)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS--CE--EEECHH-H
T ss_pred CEEEEcccchhHHHHHHHHHHHHHHHHcCCCceEeecCCCchheEeccccccccHHHhhhhhhccc--ce--eeehhh-h
Confidence 589999999999999999988653 555 7799998656665544445888999999999987 44 456776 3
Q ss_pred ccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCC
Q 016934 182 FSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERG 261 (380)
Q Consensus 182 Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~ 261 (380)
|+ +++|++|++.++ .+++.||||+|||||++|+||+++|+ ++|+++.+++++..++ +
T Consensus 76 ~~---~ls~~~Fi~~~l--~~~~~ivvG~Df~FG~~r~G~~~~Lk----~~g~~v~~i~~~~~~~--------------~ 132 (157)
T d1mrza2 76 IK---DLTPEGFVERYL--SGVSAVVVGRDFRFGKNASGNASFLR----KKGVEVYEIEDVVVQG--------------K 132 (157)
T ss_dssp HT---TCCHHHHHHHHC--TTCCEEEEETTCCBSGGGCBCHHHHH----HTTCEEEEECCCEETT--------------E
T ss_pred Hh---hhhhhHHHHHHh--hcCcEEEEecCcccccccccchhhhc----cceeEEEeeccEeeCC--------------c
Confidence 55 799999999865 37899999999999999999999996 4689999999887654 7
Q ss_pred ccchHHHHHHHHcCCchhhhhhcce
Q 016934 262 QVSSTRVRQALAMGDMKYVSELLGR 286 (380)
Q Consensus 262 ~ISST~IR~~L~~GdI~~An~LLGr 286 (380)
+||||+||++|++|||++||+||||
T Consensus 133 ~ISST~IR~~l~~G~i~~A~~lLGR 157 (157)
T d1mrza2 133 RVSSSLIRNLVQEGRVEEIPAYLGR 157 (157)
T ss_dssp ECCHHHHHHHHHTTCTTTTHHHHSS
T ss_pred EEcHHHHHHHHHcCCHHHHHHhcCC
Confidence 8999999999999999999999998
No 2
>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.87 E-value=9.6e-23 Score=179.25 Aligned_cols=85 Identities=8% Similarity=-0.048 Sum_probs=74.0
Q ss_pred ceeeeEEEEEeecccccccCCC-cccCCCCCCCC-----C--CCCCCcEEEEEEEEcCccc----ceeeceEEeCCceEE
Q 016934 285 GRQHRLILTVNDHDELISTSNK-HRVSVPKSCLL-----N--LPPKEGFYGNSVLLFGEEN----PVKCRICIDASHIHL 352 (380)
Q Consensus 285 Grpy~i~G~Vv~G~~~~~~~~G-r~lGfPTANl~-----~--llP~~GVYav~v~~~g~~~----~iG~rpt~~~~~~~v 352 (380)
-+||++.|+|+||+++ | |+||||||||. . ..|++|||++++.+++.++ |+|.||||+++...+
T Consensus 13 PyPy~i~G~Vv~G~~~-----G~R~LGfPTANl~~~~~~~l~~~P~~GVYa~~v~i~~~~y~~v~niG~rPTf~~~~~~~ 87 (154)
T d1n08a_ 13 PYPIRFEGKVVHGFGR-----GSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKRVFPMVMSVGWNPYYKNKLRSA 87 (154)
T ss_dssp TCCEEEEEEEECCSSS-----CGGGGTCCCEEECGGGTTTTTTTSCSEEEEEEEEETTEEEEEEEEEEECTTCSSCCEEE
T ss_pred CCCEEEEEEEEeCCcc-----CCcccCcCCeeecCccccccccccccceEEEEEeeeceeEEEEEeeccchhcccccceE
Confidence 3568999999999988 8 89999999994 2 3489999999999998876 689999999888899
Q ss_pred EEeeccCCCCCC-CCCCceEEEEEcc
Q 016934 353 EMDKVGFCNFDH-SQDFKLLGIEFGD 377 (380)
Q Consensus 353 E~h~l~~~df~~-~~yg~~l~vef~~ 377 (380)
|||++| |++ |+||+.|+|+|.+
T Consensus 88 Evhild---f~~~dlYg~~i~V~~~~ 110 (154)
T d1n08a_ 88 EVHLIE---RQGEDFYEEIMRVIVLG 110 (154)
T ss_dssp EEEETT---CCSCCCTTCEEEEEEEE
T ss_pred EEEEec---ccchhhcCEEEEEEEee
Confidence 997665 775 9999999999954
No 3
>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=5.3e-22 Score=173.26 Aligned_cols=84 Identities=11% Similarity=0.080 Sum_probs=73.5
Q ss_pred eeeEEEEEeecccccccCCC-cccCCCCCCCC----CCCC---CCcEEEEEEEE-cCccc----ceeeceEEeCCceEEE
Q 016934 287 QHRLILTVNDHDELISTSNK-HRVSVPKSCLL----NLPP---KEGFYGNSVLL-FGEEN----PVKCRICIDASHIHLE 353 (380)
Q Consensus 287 py~i~G~Vv~G~~~~~~~~G-r~lGfPTANl~----~llP---~~GVYav~v~~-~g~~~----~iG~rpt~~~~~~~vE 353 (380)
||++.|+|+||+++ | |+||||||||. .++| +.|||++++.+ +++++ |+|.||||+++...+|
T Consensus 4 Py~i~G~Vv~G~~~-----G~r~LGfPTANl~~~~~~~lp~~~~~GVY~~~v~i~~~~~y~gi~niG~rPTf~~~~~~~E 78 (147)
T d1nb9a_ 4 PYFCRGQVVRGFGR-----GSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSME 78 (147)
T ss_dssp SEEEEEECBCCSSS-----CGGGGTCCCEECCHHHHHTSCTTSCSEEEEEEEEETTCCCEEEEEEEEECTTSSSCCEEEE
T ss_pred CEEEEEEEEeCCcc-----CCCccCcCCcCCcCchhhccccccccCceEEEEEecCCCccceEEEeccccccccccceEE
Confidence 89999999999988 8 89999999995 3444 68999999988 55655 6899999998888999
Q ss_pred EeeccCCCCCCCCCCceEEEEEcc
Q 016934 354 MDKVGFCNFDHSQDFKLLGIEFGD 377 (380)
Q Consensus 354 ~h~l~~~df~~~~yg~~l~vef~~ 377 (380)
+|+++ ||++|+||+.|+|||..
T Consensus 79 ~h~l~--dF~~dlYG~~i~V~~~~ 100 (147)
T d1nb9a_ 79 THIMH--TFKEDFYGEILNVAIVG 100 (147)
T ss_dssp EEESS--CCSSCCTTSEEEEEEEE
T ss_pred EEEec--cCCCceeeeEEEEEEEe
Confidence 99886 89999999999999953
No 4
>d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=99.83 E-value=1.6e-21 Score=166.97 Aligned_cols=82 Identities=20% Similarity=0.233 Sum_probs=54.8
Q ss_pred eeEEEEEeecccccccCCCcccCCCCCCCC----C-CCCCCcEEEEEEEE-cCccc----ceeeceEEe-CCceEEEEee
Q 016934 288 HRLILTVNDHDELISTSNKHRVSVPKSCLL----N-LPPKEGFYGNSVLL-FGEEN----PVKCRICID-ASHIHLEMDK 356 (380)
Q Consensus 288 y~i~G~Vv~G~~~~~~~~Gr~lGfPTANl~----~-llP~~GVYav~v~~-~g~~~----~iG~rpt~~-~~~~~vE~h~ 356 (380)
|.|+|+|+||+++ ||+||||||||. . ++|+.|||++++.+ ++.++ ++|.||||+ ++...+|+|+
T Consensus 2 y~i~G~V~~G~~~-----Gr~lGfPTANl~~~~~~~~~p~~GVY~~~v~~~~~~~~~~v~~iG~~PTf~~~~~~~~E~hi 76 (130)
T d1mrza1 2 FEIEGIVHKDREF-----GRKLGFPTANIDRGNEKLVDLKRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYI 76 (130)
T ss_dssp CEEEEEC----------------CCCEECBCCSSCBCCCCSEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEE
T ss_pred EEEEEEEEeCCcc-----ccccCCCCCCcccccccccccccceeEEEEEEeeccccceEEEEEeecccccccceeEEEEE
Confidence 8999999999988 999999999994 2 45789999999987 45544 589999996 4667899965
Q ss_pred ccCCCCCCCCCCceEEEEEcc
Q 016934 357 VGFCNFDHSQDFKLLGIEFGD 377 (380)
Q Consensus 357 l~~~df~~~~yg~~l~vef~~ 377 (380)
+| |++|+||+.|.|+|..
T Consensus 77 ~d---f~~dlYg~~i~v~f~~ 94 (130)
T d1mrza1 77 LD---FEGDLYGQRLKLEVLK 94 (130)
T ss_dssp TT---CCSCCTTCEEEEEEEE
T ss_pred cc---cCcccCCCEEEEEEEE
Confidence 55 8999999999999953
No 5
>d1coza_ c.26.1.2 (A:) CTP:glycerol-3-phosphate cytidylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=99.59 E-value=1.3e-15 Score=127.93 Aligned_cols=123 Identities=18% Similarity=0.252 Sum_probs=86.2
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQF 182 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~F 182 (380)
..|++.|.||++|.||+++|++|++.|..++ ++.|. .+. .....|+++.++|.++|+++. +||.+++....
T Consensus 2 k~V~~~G~FD~lH~GH~~~l~~Ak~~gd~liV~v~sD~--~~~-~~k~~pi~~~~eR~~~l~~~~-~Vd~v~~~~~~--- 74 (126)
T d1coza_ 2 KKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE--FNL-QKQKKAYHSYEHRKLILETIR-YVDEVIPEKNW--- 74 (126)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHH--HHH-HHTCCCSSCHHHHHHHHTTBT-TCCEEEEECCS---
T ss_pred cEEEEeeEeCCCCHHHHHHHHHHHhhCceeeeeeeccc--hhh-hccCcccCCHHHHHHHhhhhc-ccceeeecccc---
Confidence 3689999999999999999999999987644 44443 111 123468999999999999987 59987763211
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCc
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQ 262 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ 262 (380)
++....+.+++++.+++|+||.-. ...+ +.+.++..++.. ..
T Consensus 75 ---------~~~~~~i~~~~~d~~v~G~D~~~~------~~~~-----~~~~~~i~~~~~------------------~~ 116 (126)
T d1coza_ 75 ---------EQKKQDIIDHNIDVFVMGDDWEGK------FDFL-----KDQCEVVYLPRT------------------EG 116 (126)
T ss_dssp ---------TTHHHHHHHTTCSEEEEEGGGTTT------TGGG-----TTTSEEEEECCC------------------TT
T ss_pred ---------cccHhhhhccCCCEeeeccccccc------hHHH-----HcCCEEEEECCC------------------CC
Confidence 112223456799999999999622 1222 345677776642 34
Q ss_pred cchHHHHHHH
Q 016934 263 VSSTRVRQAL 272 (380)
Q Consensus 263 ISST~IR~~L 272 (380)
+|||.||+.|
T Consensus 117 iSST~i~~~I 126 (126)
T d1coza_ 117 ISTTKIKEEI 126 (126)
T ss_dssp CCHHHHHHTC
T ss_pred ccHHHHHHhC
Confidence 9999999853
No 6
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.39 E-value=1.2e-12 Score=110.98 Aligned_cols=135 Identities=13% Similarity=0.081 Sum_probs=81.1
Q ss_pred EEEEeecCccCHHHHHHHHHHHHhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccccccC
Q 016934 107 IVALGKFDALHIGHRELAIQASKIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQFSSVR 186 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~Fa~i~ 186 (380)
++++|.||++|+||+.|+++|.+....+++....+.. .....+.++.++|.++++......+.........+..
T Consensus 3 gl~~G~FdP~H~GH~~li~~a~~~~d~v~v~i~~~~~---~~~~~~~~s~~~R~~~i~~~~~~~~~~~~~~~~~~~~--- 76 (164)
T d1f9aa_ 3 GFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK---SHTLENPFTAGERILMITQSLKDYDLTYYPIPIKDIE--- 76 (164)
T ss_dssp EEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCS---
T ss_pred EEEecccCCCCHHHHHHHHHHHHhCCCeEEEecCCcc---ccCcCCCCCHHHHHHHHHHHhhhcCcceeeccccccc---
Confidence 5889999999999999999999886654432211100 0112345788999998877643344333322222221
Q ss_pred CCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchH
Q 016934 187 HLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSST 266 (380)
Q Consensus 187 ~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST 266 (380)
.+...+. .++.+.... |+.|+. .....++.+..|+++..++... ...||||
T Consensus 77 --~~~~~~~-~~~~~~~~~-----~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~----------------~~~ISST 127 (164)
T d1f9aa_ 77 --FNSIWVS-YVESLTPPF-----DIVYSG-----NPLVRVLFEERGYEVKRPEMFN----------------RKEYSGT 127 (164)
T ss_dssp --CGGGHHH-HHHHHSCCC-----SEEECC-----CHHHHHHHHHTTCEEECCCCCS----------------TTTSSHH
T ss_pred --hHHHHHH-HHHhhcCce-----EEEEcC-----hHHHHHHHHhcCCeEEEecCcC----------------CCCcCHH
Confidence 1222333 233444332 333332 2455667788899877665321 2579999
Q ss_pred HHHHHHHcCC
Q 016934 267 RVRQALAMGD 276 (380)
Q Consensus 267 ~IR~~L~~Gd 276 (380)
.||++|++|+
T Consensus 128 ~IR~~i~~g~ 137 (164)
T d1f9aa_ 128 EIRRRMLNGE 137 (164)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 9999999884
No 7
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]}
Probab=99.34 E-value=2.4e-13 Score=113.64 Aligned_cols=149 Identities=14% Similarity=0.045 Sum_probs=82.7
Q ss_pred CceEEEEeecCccCHHHHHHHHHHHHhCCCEE--EeecC--cccccccCCCCCCCChHHHHHHHHhcCCccC-eEEEEec
Q 016934 104 AGGIVALGKFDALHIGHRELAIQASKIGAPYL--LSFIG--MAEVFGWEPRAPIVAKCDRKRVLSSWAPYCG-NVAPVEF 178 (380)
Q Consensus 104 ~~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~V--vtF~~--P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD-~vv~~~F 178 (380)
+..++++|.||++|+||++|+++|++.+..++ ++.++ +..........++.+..+|.++++....... .+.+..+
T Consensus 2 kkigl~~G~FdP~H~GH~~l~~~a~~~~d~v~v~i~~~~~~~~~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~ 81 (163)
T d1lw7a1 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHL 81 (163)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEEE
T ss_pred CeEEEEeeeCCCCCHHHHHHHHHHHHhCCccEEEEECCCCccccccccccccCCCCHHHHHHHHHHhCccCCceEEEEec
Confidence 45789999999999999999999998876532 34333 2222222234567888999999877653222 2333333
Q ss_pred cccccccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCc
Q 016934 179 QIQFSSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSK 258 (380)
Q Consensus 179 ~~~Fa~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~ 258 (380)
.........-.......... ..+.....+.+..|+.+.. ....+.+.+++++.+++.-.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--------------- 140 (163)
T d1lw7a1 82 VEDGIPSYPNGWQSWSEAVK--TLFHEKHFEPSIVFSSEPQ----DKAPYEKYLGLEVSLVDPDR--------------- 140 (163)
T ss_dssp ECSSSCCTTSCHHHHHHHHH--HHHHHTTCCCSEEECSCGG----GHHHHHHHTCCEEECCCSSC---------------
T ss_pred chhccccChHHHHHHHHHhc--ccceEEEecCCEEEecchh----chHHHHHhcCCeEEEEecCC---------------
Confidence 22211100112222222111 1111122344445554433 23455677888876664321
Q ss_pred cCCccchHHHHHHHH
Q 016934 259 ERGQVSSTRVRQALA 273 (380)
Q Consensus 259 ~~~~ISST~IR~~L~ 273 (380)
....||||.||+.+.
T Consensus 141 ~~~~ISST~IR~~~~ 155 (163)
T d1lw7a1 141 TFFNVSATKIRTTPF 155 (163)
T ss_dssp CSSCCCHHHHHHCGG
T ss_pred CCCeEcHHHHHHHHH
Confidence 135799999999775
No 8
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=99.11 E-value=7.6e-11 Score=100.22 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=75.3
Q ss_pred EEEEeecCccCHHHHHHHHHHHHhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhc----CCccCeEEEEeccccc
Q 016934 107 IVALGKFDALHIGHRELAIQASKIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSW----APYCGNVAPVEFQIQF 182 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~l----g~~vD~vv~~~F~~~F 182 (380)
++..|.||++|.||+.|+++|.+....+++ +.++... +......++..+|.++++.. +.....+...+.. ++
T Consensus 3 gi~~G~FdP~H~GH~~ii~~a~~~~d~v~v-~i~~~~~--~~~~~~~~~~~~R~~mi~~~~~~~~~~~~~~~~~~~~-~~ 78 (167)
T d1ej2a_ 3 GLLVGRMQPFHRGHLQVIKSILEEVDELII-CIGSAQL--SHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQ-DI 78 (167)
T ss_dssp EEEEECCTTCCHHHHHHHHHHTTTCSEEEE-EECSTTC--CSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECC-CC
T ss_pred EEEeeccCCCCHHHHHHHHHHHHHCCceEE-EEecCCC--CCCccccccHHHHHHHHHHHHHHcCCCceeEEeccch-hh
Confidence 588999999999999999999887655332 2221000 01123467888998876553 2111111211111 11
Q ss_pred cccCCCCHHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCc
Q 016934 183 SSVRHLSPQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQ 262 (380)
Q Consensus 183 a~i~~ls~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ 262 (380)
........ .++.+. .|.|+.|+. + ...+++.++.|+++..++... ...
T Consensus 79 -----~~~~~~~~-~~~~~~-----~~~~~~~~~----~-~~~~~~~~~~~~~v~~~~~~~----------------~~~ 126 (167)
T d1ej2a_ 79 -----ECNALWVG-HIKMLT-----PPFDRVYSG----N-PLVQRLFSEDGYEVTAPPLFY----------------RDR 126 (167)
T ss_dssp -----SCHHHHHH-HHHHHS-----CCCSEEECC----C-HHHHHHHHHTTCCEECCCCSS----------------TTT
T ss_pred -----hhHHHHHH-HHheee-----eceeEEEcc----h-HHHHHHHHcCCCeEEeccccc----------------ccc
Confidence 12222222 223332 233333332 1 344566778899877665421 256
Q ss_pred cchHHHHHHHHcCC
Q 016934 263 VSSTRVRQALAMGD 276 (380)
Q Consensus 263 ISST~IR~~L~~Gd 276 (380)
||||.||+.+.+|+
T Consensus 127 ISST~IR~~i~~g~ 140 (167)
T d1ej2a_ 127 YSGTEVRRRMLDDG 140 (167)
T ss_dssp SSHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHcCC
Confidence 99999999999874
No 9
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]}
Probab=98.79 E-value=8.1e-08 Score=86.05 Aligned_cols=164 Identities=14% Similarity=0.105 Sum_probs=90.5
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh-CCC-E--EEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI-GAP-Y--LLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQI 180 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~-g~~-~--VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~ 180 (380)
..|+++|.||.+|.||.+|++.|.+. ++. + +.+..||.+ ...+..+..+|.+++......-+.+.+.+|..
T Consensus 20 ~~v~~f~TfnP~H~GHl~ia~~a~~~~~ld~v~~iP~~~~p~K-----~~~~~~~~~~r~~m~~~a~~~~~~~~is~~E~ 94 (223)
T d1jhda2 20 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGKLKK-----GDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGF 94 (223)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECCCCT-----TCCCHHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred CEEEEeeCCCCCCHHHHHHHHHHHHHhCcCceEEecccCCCCc-----CCCccccHHHHHHHHHHhhcCCCceeeccccc
Confidence 46799999999999999999998865 544 2 234333322 11123345566665443221245666666654
Q ss_pred cccccCCCCH-HHHHHHHHH-hhCccEEEEcCCCCCCCCCCCCHHHHHHHHhh-----cCcEEEEEcceeccCCC--CCc
Q 016934 181 QFSSVRHLSP-QQFVEKLSR-ELGVRGVVAGENYRFGYKAAGDASELVRLCEE-----YGMDACIINSVMDKHQD--SRD 251 (380)
Q Consensus 181 ~Fa~i~~ls~-e~Fie~L~~-~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~-----~G~~v~iV~~v~~~~~~--~~~ 251 (380)
+-. .-++ .+-++.+.+ ..+...+++|.|-......+...+.+..++.- .+......+...+.... ...
T Consensus 95 ~~~---~~syt~~tl~~l~~~~~~~~~~iiG~D~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (223)
T d1jhda2 95 DML---YAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKIVM 171 (223)
T ss_dssp CCC---CCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEEEE
T ss_pred ccc---CCCcHHHHHHHHHHhCCcceEEEEeecccccccCcCcHHHHHHHHhhccccccccccccchhHHHhhhhcccee
Confidence 332 1233 334454544 34678899999986666667777776665542 23333222221111000 000
Q ss_pred c--cC-CCCccCCccchHHHHHHHHcCC
Q 016934 252 I--DC-NDSKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 252 ~--~~-~~~~~~~~ISST~IR~~L~~Gd 276 (380)
. .+ .....-..||||.||+.|++|+
T Consensus 172 ~~~~~~~~~~~~i~ISST~IR~~l~~G~ 199 (223)
T d1jhda2 172 MRDVPDHTKEDFVLLSGTKVREMLGQGI 199 (223)
T ss_dssp GGGCTTCCGGGEECCCHHHHHHHHHTTC
T ss_pred hhhhhcccCCCcceeCHHHHHHHHHCcC
Confidence 0 01 0111123599999999999997
No 10
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=98.71 E-value=5.2e-08 Score=81.51 Aligned_cols=162 Identities=12% Similarity=-0.073 Sum_probs=75.9
Q ss_pred CceEEEEeecCccCHHHHHHHHHHHHhCC-C-EEEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccc
Q 016934 104 AGGIVALGKFDALHIGHRELAIQASKIGA-P-YLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQ 181 (380)
Q Consensus 104 ~~~vvtIG~FDGvHlGHq~LI~~A~~~g~-~-~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~ 181 (380)
+..++.-|.||.+|+||++|+++|.+... . ++++..++... .+........++...+.........+.... .+
T Consensus 2 kkIalfgGSFdP~H~GH~~ii~~a~~~~~~~~V~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e 76 (189)
T d1kama_ 2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPH---KQNEDYTDSFHRVEMLKLAIQSNPSFKLEL--VE 76 (189)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEECC--GG
T ss_pred CEEEEeccCcCCCCHHHHHHHHHHHHHcCCCEEEEEeccCCcc---cccchhhHHHHHHHHHHhhhccCcceeech--hh
Confidence 34567889999999999999999998743 3 33433321000 011122334444444333221123333222 22
Q ss_pred ccccCCCCHHHHHHHHHH--hhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCcc
Q 016934 182 FSSVRHLSPQQFVEKLSR--ELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKE 259 (380)
Q Consensus 182 Fa~i~~ls~e~Fie~L~~--~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~ 259 (380)
......-..-+-+..+.. .......++|.|...........+.+.. ..+ ..+.+........ ..........
T Consensus 77 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~-~~~~~~~~~~ 150 (189)
T d1kama_ 77 MEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLN---LIQ--FIGVKRPGFHVET-PYPLLFADVP 150 (189)
T ss_dssp GSTTCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCCCCHHHHHHHH---HSE--EEEEECSSCCCCC-SSCCEEEECC
T ss_pred hccCCcceehhhhhHHhhcCCcchhhhhhhcccccccccchhhhhhhh---hcc--eeecccccccccc-chhhhccccc
Confidence 211111112222333322 2356778999998776655554444332 222 2222221111000 0000001112
Q ss_pred CCccchHHHHHHHHcCC
Q 016934 260 RGQVSSTRVRQALAMGD 276 (380)
Q Consensus 260 ~~~ISST~IR~~L~~Gd 276 (380)
...||||.||++|..|+
T Consensus 151 ~~~ISST~IR~~i~~~~ 167 (189)
T d1kama_ 151 EFEVSSTMIRERFKSKK 167 (189)
T ss_dssp CBCCCHHHHHHHHHHTC
T ss_pred cCcCChHHHHHHHHcCC
Confidence 24699999999999874
No 11
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]}
Probab=98.64 E-value=2.7e-08 Score=89.42 Aligned_cols=72 Identities=13% Similarity=0.087 Sum_probs=43.4
Q ss_pred EEEEeecCccCHHHHHHHHHHHHh----CCCEEE-eecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccc
Q 016934 107 IVALGKFDALHIGHRELAIQASKI----GAPYLL-SFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQI 180 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~----g~~~Vv-tF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~ 180 (380)
++.-|+||.+|.||..+++.|++. ....++ .+.+|.. ......++.+..+|.++++..-...+.+.+-++..
T Consensus 7 l~~~GSFdP~H~GHl~i~~~a~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~R~~M~~la~~~~~~~~v~~~e~ 83 (233)
T d1nuua_ 7 LLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVN--DTYGKKDLAASHHRVAMARLALQTSDWIRVDPWES 83 (233)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHSSEEEEEEEEEECC--TTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHH
T ss_pred EEEeeeeCccHHHHHHHHHHHHHHhCcccceeeeeEEEccCC--CCcccCccCCHHHHHHHHHHHHhccCCEEEehHHH
Confidence 345599999999999999998764 222222 1211211 11123457889999998765433345566555543
No 12
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.59 E-value=2.5e-07 Score=85.59 Aligned_cols=70 Identities=13% Similarity=0.042 Sum_probs=44.3
Q ss_pred EEEEeecCccCHHHHHHHHHHHHh----CCCEE--EeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecc
Q 016934 107 IVALGKFDALHIGHRELAIQASKI----GAPYL--LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQ 179 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~----g~~~V--vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~ 179 (380)
.+.-|.||.+|.||.++++.|++. +...+ +-|.| .. .+.....+.+.++|+++++..-.+.+.+.+-+++
T Consensus 7 ~l~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~~~~~~~~P-~~--~~~~k~~~~s~~~Rl~Ml~la~~~~~~~~vs~~E 82 (271)
T d1kr2a_ 7 LLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISP-VG--DAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWE 82 (271)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEE-CC--GGGCCTTCCCHHHHHHHHHHHTTTCSSEEECCHH
T ss_pred EEEccccCcchHHHHHHHHHHHHHHhhccccceeEEEEec-CC--CCCcCCCCCCHHHHHHHHHHHHhcCCCEEEeehh
Confidence 366799999999999999988753 21111 22222 10 0111234678899999988765456777665554
No 13
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=98.57 E-value=2.9e-07 Score=75.59 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=25.0
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCE
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPY 134 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~ 134 (380)
.++..|.||.+|.||++|+++|.+....+
T Consensus 2 ~AifgGsFdP~H~GHl~li~~a~~~~D~v 30 (157)
T d1qjca_ 2 RAIYPGTFDPITNGHIDIVTRATQMFDHV 30 (157)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHTTSSEE
T ss_pred EEEEeeccCCCCHHHHHHHHHHHHhCCEe
Confidence 46789999999999999999998876553
No 14
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=98.56 E-value=2.1e-07 Score=77.62 Aligned_cols=55 Identities=18% Similarity=0.302 Sum_probs=38.3
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSW 166 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~l 166 (380)
.+|..|.||.+|.||+.++++|.+....+++.-.+ ..+..+..+.++|.+++...
T Consensus 3 IaifgGsFdPiH~GHl~i~~~a~~~~D~v~v~~~~------~~~~~~~~~~~~r~~~~~~~ 57 (163)
T d1o6ba_ 3 IAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLN------NSSKKPLFSVEERCELLREV 57 (163)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECC------CCSSCCSSCHHHHHHHHHHH
T ss_pred EEEeccccCCCCHHHHHHHHHHHHhCCEEEEcccc------cccccccCCHHHHHHHHhhh
Confidence 57889999999999999999998875544432211 11234567788888775554
No 15
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]}
Probab=98.54 E-value=5.4e-07 Score=74.27 Aligned_cols=28 Identities=32% Similarity=0.459 Sum_probs=24.4
Q ss_pred EEEEeecCccCHHHHHHHHHHHHhCCCE
Q 016934 107 IVALGKFDALHIGHRELAIQASKIGAPY 134 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~g~~~ 134 (380)
++..|.||.+|.||++++++|.+....+
T Consensus 3 ~ifgGsFdP~H~GHl~ii~~a~~~~D~v 30 (160)
T d1od6a_ 3 VVYPGSFDPLTNGHLDVIQRASRLFEKV 30 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEE
T ss_pred EEeeeccCCcCHHHHHHHHHHHHhCCEE
Confidence 4778999999999999999999886554
No 16
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=98.49 E-value=4.1e-07 Score=77.30 Aligned_cols=115 Identities=13% Similarity=0.113 Sum_probs=57.9
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHh-CCC-E--EEeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEecccc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKI-GAP-Y--LLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQ 181 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~-g~~-~--VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~ 181 (380)
.++--|+||.+|.||..+++.|.+. +.. + +++.++|.+ ........++.+.+..+....+.+....+...
T Consensus 5 ~AlfgGSFnP~h~GHl~~~~~a~~~~~~d~v~~~p~~~~~~k------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (213)
T d1k4ma_ 5 QALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHR------PQPEANSVQRKHMLELAIADKPLFTLDERELK 78 (213)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTS------CCCSSCHHHHHHHHHHHHTTCTTEEECCHHHH
T ss_pred EEEEecCcCcCcHHHHHHHHHHHHHcCCCEEEEEEeCCCchh------cccccchHHHHHHHHHHhhcccceeeeecccc
Confidence 4566799999999999999999876 433 3 344444322 11223444455444333222333333332211
Q ss_pred ccccCCCCHHHHHHHHHHhh---CccEEEEcCCCCCCCCCCCCHHHHHHH
Q 016934 182 FSSVRHLSPQQFVEKLSREL---GVRGVVAGENYRFGYKAAGDASELVRL 228 (380)
Q Consensus 182 Fa~i~~ls~e~Fie~L~~~L---~vk~IVVG~DFrFG~~r~Gd~~~Lk~l 228 (380)
... ......-........ ..-.+++|.|-......+.+.+.+.+.
T Consensus 79 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~w~~~~~~~~~ 126 (213)
T d1k4ma_ 79 RNA--PSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDN 126 (213)
T ss_dssp CSS--CCCHHHHHHHHHHHHCTTSCEEEEEEHHHHHHGGGSTTHHHHHHH
T ss_pred cCC--CccceeecchhhcccCCCceeeeccceeeeccccchhhhhhcccc
Confidence 110 111111111112222 233677888776666667677666543
No 17
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.49 E-value=1.1e-06 Score=72.42 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=27.7
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHhCCCEEEee
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKIGAPYLLSF 138 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF 138 (380)
..+|..|.||.+|+||.+++++|.+.....++.+
T Consensus 2 ~~Av~~GsFdPiH~GHl~i~~~a~~~~d~~~v~~ 35 (157)
T d1tfua_ 2 TGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAI 35 (157)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEE
T ss_pred CEeEeCcCCCCCCHHHHHHHHHHHHhcChHHhhc
Confidence 3678999999999999999999988765544433
No 18
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=98.42 E-value=1.2e-06 Score=72.10 Aligned_cols=30 Identities=27% Similarity=0.432 Sum_probs=25.4
Q ss_pred EEEEeecCccCHHHHHHHHHHHHhCCCEEE
Q 016934 107 IVALGKFDALHIGHRELAIQASKIGAPYLL 136 (380)
Q Consensus 107 vvtIG~FDGvHlGHq~LI~~A~~~g~~~Vv 136 (380)
++..|.||.+|.||.+++++|.+....+++
T Consensus 3 aifgGsFdPiH~GHl~i~~~a~~~~D~v~v 32 (157)
T d1vlha_ 3 AVYPGSFDPITLGHVDIIKRALSIFDELVV 32 (157)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTTCSEEEE
T ss_pred EEEeecCCCCcHHHHHHHHHHHHhcCcccc
Confidence 588999999999999999999887555443
No 19
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=97.35 E-value=0.0036 Score=55.82 Aligned_cols=162 Identities=15% Similarity=0.168 Sum_probs=92.9
Q ss_pred eEEEEeecCccCHHHHHHHHHHHHhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhc---CCccCeEEEEeccccc
Q 016934 106 GIVALGKFDALHIGHRELAIQASKIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSW---APYCGNVAPVEFQIQF 182 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~l---g~~vD~vv~~~F~~~F 182 (380)
.|+++=.=+-+|+||..|++.|.+.+.-++|.. ++++. ..--++..-|.+..+.+ ...-+.+++.++....
T Consensus 22 ~v~aFqTrnp~Hr~He~i~~~a~~~~~~lli~p-----~vG~~-k~gd~~~~~r~~~y~~~~~~~~~~~~v~l~~~~~~m 95 (214)
T d1v47a2 22 KVVAFQTRNAPHRAHEYLIRLGLELADGVLVHP-----ILGAK-KPDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPM 95 (214)
T ss_dssp SEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEE-----BCSCC-CTTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCC
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHhcCCEEEee-----eeccC-CccccCHHHHHHHHHHHHhhcCCCCeEEEEecCccc
Confidence 456644559999999999999998865555544 22221 11234455555433221 1012456665554322
Q ss_pred cccCCCCHHHH-HHH-HHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhh---cCcEEEEEcceeccCC--CCCcc-c-
Q 016934 183 SSVRHLSPQQF-VEK-LSRELGVRGVVAGENYRFGYKAAGDASELVRLCEE---YGMDACIINSVMDKHQ--DSRDI-D- 253 (380)
Q Consensus 183 a~i~~ls~e~F-ie~-L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~---~G~~v~iV~~v~~~~~--~~~~~-~- 253 (380)
- --.|.|= ++- +-+++|+.+++||.|.. |.+.-.+..+-++++++ .|+++..++...+-.. .+.+. +
T Consensus 96 ~---yaGPrEA~lhAiirkN~GcthfiVGRDHA-G~g~~Y~~~~a~~i~~~~~~l~I~ii~~~e~~Yc~~c~~~v~~~~c 171 (214)
T d1v47a2 96 R---YAGPKEAVFHALVRKNFGATHFLVGRDHA-GVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPLCGGIASERTC 171 (214)
T ss_dssp C---CCTHHHHHHHHHHHHHTTCSEEEECTTTT-CSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETTTTEEEETTTS
T ss_pred c---cccchHHHHHHHHHHhcCCCeEEEcCcCC-chhhcCCchhhhHHHHhCCccCceEEEcccceeehhhCceeecccC
Confidence 1 2356663 444 45689999999999986 76666666666666665 4666655433322111 01111 1
Q ss_pred CCCCc-cCCccchHHHHHHHHcCCc
Q 016934 254 CNDSK-ERGQVSSTRVRQALAMGDM 277 (380)
Q Consensus 254 ~~~~~-~~~~ISST~IR~~L~~GdI 277 (380)
|-... .-..||.|.||++|.+|+.
T Consensus 172 ~~~~~~~~~~ISGT~iR~~L~~G~~ 196 (214)
T d1v47a2 172 PEGHREKRTAISMTKVRALLREGKA 196 (214)
T ss_dssp CGGGGGGCEECCHHHHHHHHHTTCC
T ss_pred CCCCcccceecCHHHHHHHHHCcCC
Confidence 11111 1245999999999999985
No 20
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.28 E-value=0.0028 Score=56.68 Aligned_cols=162 Identities=15% Similarity=0.187 Sum_probs=89.7
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh-CCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCC--ccCeEEEEecccc
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI-GAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAP--YCGNVAPVEFQIQ 181 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~-g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~--~vD~vv~~~F~~~ 181 (380)
..|+++=.=+-+|+||.+|+++|.+. +.-++|... +++.. .-=++.+-|.+.++.+-. .-+.+++.++...
T Consensus 21 ~~v~afqTrnp~Hr~He~i~~~a~~~~~~~lli~p~-----vg~~k-~gd~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 94 (221)
T d1g8fa2 21 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPV-----VGLTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLA 94 (221)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEB-----CSBCS-TTCCCHHHHHHHHHHHGGGSCTTSEEECCBCCB
T ss_pred CeEEEEecCCCCCHHHHHHHHHHHHhcCCCEEEeec-----ccCCc-cccCCHHHHHHHHHHHHHhcCCCeEEEEecccc
Confidence 36788888899999999999987654 444444432 22111 112455556554433311 1245555554322
Q ss_pred ccccCCCCHHH-HHHH-HHHhhCccEEEEcCCCCCCCC------CCCCHHH----HHHHHhhcCcEEEEEcceeccCC--
Q 016934 182 FSSVRHLSPQQ-FVEK-LSRELGVRGVVAGENYRFGYK------AAGDASE----LVRLCEEYGMDACIINSVMDKHQ-- 247 (380)
Q Consensus 182 Fa~i~~ls~e~-Fie~-L~~~L~vk~IVVG~DFrFG~~------r~Gd~~~----Lk~l~~~~G~~v~iV~~v~~~~~-- 247 (380)
.- --.|.| .++- +-+++|+.+++||.|.. |-+ .-.+..+ +.++..+.|+++..++...+-..
T Consensus 95 m~---yaGPrEA~lhAiirkN~GcthfiVGRDHA-G~g~~~~~~~~Y~~~~a~~~~~~~~~~l~I~ii~~~~~~Yc~~c~ 170 (221)
T d1g8fa2 95 MR---MSGDREAVWHAIIRKNYGASHFIVGRDHA-GPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPDED 170 (221)
T ss_dssp CC---CCHHHHHHHHHHHHHHTTCSEEECCTTTT-CCCBCTTSCBSSCTTHHHHHHHHTHHHHCSEEECCCCEEEEGGGT
T ss_pred cc---ccchHHHHHHHHHHHhcCCCeeEeccccc-CCCCCCccccccChhhhHHHHHhcccccceeeecccceeeeccCC
Confidence 21 123555 4444 45689999999999986 532 1222223 34444566777665544332111
Q ss_pred CCCc-ccC-CCCccCCccchHHHHHHHHcCC
Q 016934 248 DSRD-IDC-NDSKERGQVSSTRVRQALAMGD 276 (380)
Q Consensus 248 ~~~~-~~~-~~~~~~~~ISST~IR~~L~~Gd 276 (380)
.+.. .++ ....+-..||.|.||++|++|+
T Consensus 171 ~~v~~~~c~h~~~~~i~ISGT~iR~~L~~G~ 201 (221)
T d1g8fa2 171 RYAPIDQIDTTKTRTLNISGTELRRRLRVGG 201 (221)
T ss_dssp EEEEGGGCSSSCCCCBCCCHHHHHHHHHHTC
T ss_pred eEEEccccCCCcCceEEecHHHHHHHHHCCC
Confidence 1111 111 1222234799999999999995
No 21
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.44 E-value=0.01 Score=55.00 Aligned_cols=129 Identities=19% Similarity=0.229 Sum_probs=70.0
Q ss_pred eEEEEeecCccCHHHHHHHHHHHH-hCCCEEE-eecCcccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEe----c
Q 016934 106 GIVALGKFDALHIGHRELAIQASK-IGAPYLL-SFIGMAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVE----F 178 (380)
Q Consensus 106 ~vvtIG~FDGvHlGHq~LI~~A~~-~g~~~Vv-tF~~P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~----F 178 (380)
.+..+-.--++|.||..|+++|++ .+..+|+ .|.+|..+-..+- ...--+.++=+++|+..| ||.++.-. |
T Consensus 31 ~i~~VPTMGaLH~GHlsLi~~a~~~~~~~vvvSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~~--vd~vf~P~~~~iy 108 (286)
T d2a84a1 31 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEG--VEIAFTPTTAAMY 108 (286)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHTSTTCEEEEEECCCCCCTTC----------CCSHHHHHHHTT--CCEEECCCHHHHC
T ss_pred eEEEEeCCcchhHHHHHHHHHHhhcCCCEEEEEEeecccccCccccCccCCcchhhhhHHHhccC--Cceeeccchhhhc
Confidence 345566667899999999999987 4655444 5666765432110 010112223366788887 88765321 1
Q ss_pred cccccc------c-C----CCCHHHH------HHHHHHhhCccEEEEcC-CCCCCCCCCCCHHHHHHHHhhcCcEEEEE-
Q 016934 179 QIQFSS------V-R----HLSPQQF------VEKLSRELGVRGVVAGE-NYRFGYKAAGDASELVRLCEEYGMDACII- 239 (380)
Q Consensus 179 ~~~Fa~------i-~----~ls~e~F------ie~L~~~L~vk~IVVG~-DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV- 239 (380)
...+.. + + ...|--| +.+|..-.+++..+.|+ ||. -...++++.+.+++.+.++
T Consensus 109 p~~~~~~v~~~~~~~~leG~~RpgHF~GV~tVV~kLf~ii~P~~a~fGeKD~Q-------Ql~iIk~~v~~l~~~i~Ii~ 181 (286)
T d2a84a1 109 PDGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQ-------QLVLIRQLVADFNLDVAVVG 181 (286)
T ss_dssp TTCSCSCCCCCGGGGSGGGTTCTTHHHHHHHHHHHHHHHHCCSEEEEETTSHH-------HHHHHHHHHHHTTCCCEEEE
T ss_pred cCCceeeEeccccccccccCCCcHHHHHHHHHHHHHHHhcccceEEEeecccH-------HHHHHHHHHHHhcccceEEe
Confidence 111110 0 0 1122223 23455666999999886 332 2344588888876555554
Q ss_pred -ccee
Q 016934 240 -NSVM 243 (380)
Q Consensus 240 -~~v~ 243 (380)
|.+.
T Consensus 182 ~pTvR 186 (286)
T d2a84a1 182 VPTVR 186 (286)
T ss_dssp ECCCB
T ss_pred cchhh
Confidence 4443
No 22
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.40 E-value=0.019 Score=51.58 Aligned_cols=162 Identities=17% Similarity=0.129 Sum_probs=88.1
Q ss_pred ceEEEEeecCccCHHHHHHHHHHHHh----CCC---EEEeecCcccccccCCCCCCCChHHHHH----HHHhcCC-ccCe
Q 016934 105 GGIVALGKFDALHIGHRELAIQASKI----GAP---YLLSFIGMAEVFGWEPRAPIVAKCDRKR----VLSSWAP-YCGN 172 (380)
Q Consensus 105 ~~vvtIG~FDGvHlGHq~LI~~A~~~----g~~---~VvtF~~P~~vl~~~~~~~l~s~~~R~~----lL~~lg~-~vD~ 172 (380)
..|+++=.=+-+|+||.+|++.|.+. +.. +++.. +.++.. .--++..-|.+ ++.. +. .=+.
T Consensus 24 ~~VvaFqTRNp~HraHe~i~~~a~~~~~~~~~~~~~lli~P-----vvG~~k-~gD~~~~~~~~~y~~l~~~-~~~~~~~ 96 (235)
T d1x6va2 24 DAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHP-----LGGWTK-DDDVPLMWRMKQHAAVLEE-GVLNPET 96 (235)
T ss_dssp SEEEEEEESSCCCHHHHHHHHHHHHHHHHTTCSSEEEEEEE-----BCSCCC-TTSCCHHHHHHHHHHHHHT-TSSCGGG
T ss_pred CeEEEeecCCCCcHHHHHHHHHHHHHHHhccccCCeEEEee-----ccccCC-CCccChHHHHHHHHHHHHh-ccCCCCc
Confidence 46777778899999999999988653 211 22322 222211 12345555544 2322 10 1245
Q ss_pred EEEEeccccccccCCCCHHH-HHHH-HHHhhCccEEEEcCCCCCCCCC------CCCH----HHHHHHHhhcCcEEEEEc
Q 016934 173 VAPVEFQIQFSSVRHLSPQQ-FVEK-LSRELGVRGVVAGENYRFGYKA------AGDA----SELVRLCEEYGMDACIIN 240 (380)
Q Consensus 173 vv~~~F~~~Fa~i~~ls~e~-Fie~-L~~~L~vk~IVVG~DFrFG~~r------~Gd~----~~Lk~l~~~~G~~v~iV~ 240 (380)
+++.++....- --.|+| .++- +-+++|+.+++||.|+. |-+. -.+. +.+.++.++.|+++...+
T Consensus 97 ~~l~~l~~~mr---yAGPrEAllhAiiRkN~GcThfiVGRDHA-G~g~~~~~~~~y~~~~a~~~~~~~~~~l~I~ii~~~ 172 (235)
T d1x6va2 97 TVVAIFPSPMM---YAGPTEVQWHCRARMVAGANFYIVGRDPA-GMPHPETGKDLYEPSHGAKVLTMAPGLITLEIVPFR 172 (235)
T ss_dssp EEECCBCCCCC---CCHHHHHHHHHHHHHHTTCSEEEECSSTT-CCBCTTTCSBSSCTTHHHHHHHHCSSCTTSEEEECC
T ss_pred EEEEecccccc---ccccHHHHHHHHHHHhcCCCeEEEcCccc-CCCCCcccccccCccHHHHHHHhcccccceeeeeec
Confidence 55544432211 123555 4555 45689999999999996 4321 1122 233444456688876665
Q ss_pred ceeccCC--CCCcccCCCCccCCccchHHHHHHHHcCCc
Q 016934 241 SVMDKHQ--DSRDIDCNDSKERGQVSSTRVRQALAMGDM 277 (380)
Q Consensus 241 ~v~~~~~--~~~~~~~~~~~~~~~ISST~IR~~L~~GdI 277 (380)
...+-.. .+...+.-...+-..||.|.||++|.+|..
T Consensus 173 ~~~Yc~~~~~~~~~~~~~~~~~~~ISGT~iR~~L~~G~~ 211 (235)
T d1x6va2 173 VAAYNKKKKRMDYYDSEHHEDFEFISGTRMRKLAREGQK 211 (235)
T ss_dssp CEEEETTTTEEEECCSTTGGGEECCCHHHHHHHHHTTCC
T ss_pred ceeeeccCCceecCCCCCCCCeeeecHHHHHHHHHCcCC
Confidence 4432211 111111111123356999999999999964
No 23
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]}
Probab=95.30 E-value=0.051 Score=50.05 Aligned_cols=127 Identities=16% Similarity=0.155 Sum_probs=71.1
Q ss_pred EEEeecCccCHHHHHHHHHHHHhCCCEEE-eecCcccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEe--------
Q 016934 108 VALGKFDALHIGHRELAIQASKIGAPYLL-SFIGMAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVE-------- 177 (380)
Q Consensus 108 vtIG~FDGvHlGHq~LI~~A~~~g~~~Vv-tF~~P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~-------- 177 (380)
-.+-.-=++|-||..||++|++.+..+|+ .|.+|..+-..+- ....-+.++=+++|+..| ||.++.-.
T Consensus 25 g~VPTMGaLH~GHlsLi~~A~~~~~~vvvSIFVNP~QF~~~eD~~~YPr~l~~D~~~l~~~~--vd~vf~P~~~e~yp~~ 102 (282)
T d1ihoa_ 25 ALVPTMGNLHDGHMKLVDEAKARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRK--VDLVFAPSVKEIYPNG 102 (282)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHTT--CSEEECCCHHHHCTTC
T ss_pred EEEcCCcchhHHHHHHHHHHHHhCCcEEEEEEecCccCcccchhhccCccHHHHHHHHHhcC--CcEEEecCcccccccc
Confidence 33344447999999999999998877665 5666765432110 011124555578899988 88765311
Q ss_pred cc----ccccccC-CC----CHHHH------HHHHHHhhCccEEEEcC-CCCCCCCCCCCHHHHHHHHhhcCcEEE--EE
Q 016934 178 FQ----IQFSSVR-HL----SPQQF------VEKLSRELGVRGVVAGE-NYRFGYKAAGDASELVRLCEEYGMDAC--II 239 (380)
Q Consensus 178 F~----~~Fa~i~-~l----s~e~F------ie~L~~~L~vk~IVVG~-DFrFG~~r~Gd~~~Lk~l~~~~G~~v~--iV 239 (380)
+. .++..+. .| .|--| +.+|..-.+++..+-|+ ||. -...++++.+++++.+. .+
T Consensus 103 ~~~~~~i~~~~l~~~leG~~RPgHF~GV~tVV~kLf~iv~P~~a~FGeKD~Q-------Ql~iIk~mv~~~~~~i~Ii~~ 175 (282)
T d1ihoa_ 103 TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQ-------QLALIRKMVADMGFDIEIVGV 175 (282)
T ss_dssp STTSCEEECTTGGGSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEETTSHH-------HHHHHHHHHHHHTCCCEEEEE
T ss_pred ccceeeeeccccccccCCCCCcchHHHHHHHHHHHHHhcCcceEEEEEeccc-------eeeeHHHHHHhcCCCeeEEee
Confidence 00 0111010 11 22223 23455666999998876 332 23344788887765554 44
Q ss_pred ccee
Q 016934 240 NSVM 243 (380)
Q Consensus 240 ~~v~ 243 (380)
|.+.
T Consensus 176 ptvR 179 (282)
T d1ihoa_ 176 PIMR 179 (282)
T ss_dssp CCCB
T ss_pred eeee
Confidence 5543
No 24
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]}
Probab=94.83 E-value=0.028 Score=51.73 Aligned_cols=127 Identities=15% Similarity=0.170 Sum_probs=72.2
Q ss_pred EEEeecCccCHHHHHHHHHHHHhCCCEEE-eecCcccccccCC-CCCCCChHHHHHHHHhcCCccCeEEEEe----ccc-
Q 016934 108 VALGKFDALHIGHRELAIQASKIGAPYLL-SFIGMAEVFGWEP-RAPIVAKCDRKRVLSSWAPYCGNVAPVE----FQI- 180 (380)
Q Consensus 108 vtIG~FDGvHlGHq~LI~~A~~~g~~~Vv-tF~~P~~vl~~~~-~~~l~s~~~R~~lL~~lg~~vD~vv~~~----F~~- 180 (380)
-.+-.-=++|-||..||++|++.+..+|+ .|.+|..+-..+- ...--+.++=+++|+..| ||.++.-. |..
T Consensus 20 ~~VPTMGaLH~GHlsLi~~a~~~~~~vvvSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~~--vd~vf~P~~~e~yp~~ 97 (276)
T d1v8fa_ 20 GFVPTMGYLHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAG--VDLLFAPGVEEMYPEG 97 (276)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTT--CSEEECCCHHHHSCTT
T ss_pred EEEcCCccHhHHHHHHHHHHHHhCCCEEEEEEecCccCCCcchhhccccchhhhHHHHHhCC--CCEEEecccccccccc
Confidence 33444447999999999999998876554 5667765432211 111234455578899988 88766421 110
Q ss_pred ---------cccccC--CCCHHHH------HHHHHHhhCccEEEEcC-CCCCCCCCCCCHHHHHHHHhhcCcEEEEE--c
Q 016934 181 ---------QFSSVR--HLSPQQF------VEKLSRELGVRGVVAGE-NYRFGYKAAGDASELVRLCEEYGMDACII--N 240 (380)
Q Consensus 181 ---------~Fa~i~--~ls~e~F------ie~L~~~L~vk~IVVG~-DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV--~ 240 (380)
.++.+. ...|--| +.+|..-.+++..+-|+ ||. -...++++.+++++.+.++ |
T Consensus 98 ~~~~~~~~~~l~~~leG~~RPgHF~GV~tVV~kLf~ii~P~~a~fGeKD~Q-------Ql~iIk~mv~~l~~~i~Ii~~p 170 (276)
T d1v8fa_ 98 FATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQ-------QLLVVRRMVRDLGFPVEVVGVP 170 (276)
T ss_dssp CCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHH-------HHHHHHHHHHHHTCCCEEEEEC
T ss_pred cceEEEecccccccccCCCCCchHHHHHHHHHHHHhhcCcceeeeeecchh-------HHHHHHHHHHHhCCCeEEEEEe
Confidence 111100 1123233 23345556999999876 432 2334478888866655554 4
Q ss_pred cee
Q 016934 241 SVM 243 (380)
Q Consensus 241 ~v~ 243 (380)
.+.
T Consensus 171 tvR 173 (276)
T d1v8fa_ 171 TVR 173 (276)
T ss_dssp CCB
T ss_pred eEe
Confidence 443
No 25
>g1sc3.1 c.17.1.1 (A:,B:) Interleukin-1beta converting enzyme (a cysteine protease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.44 E-value=13 Score=31.84 Aligned_cols=50 Identities=10% Similarity=0.224 Sum_probs=36.1
Q ss_pred cEEEEcC-CCCCCCCCCC---CHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchHHHHHHHHc
Q 016934 204 RGVVAGE-NYRFGYKAAG---DASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSSTRVRQALAM 274 (380)
Q Consensus 204 k~IVVG~-DFrFG~~r~G---d~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST~IR~~L~~ 274 (380)
..||+|- +|+-..++.| |+..|+++.+++||+|.+.. ..+...|+++|.+
T Consensus 40 vALIIgn~~y~~~~~l~g~~~Da~~l~~~l~~lGF~V~~~~---------------------nlt~~e~~~~l~~ 93 (261)
T g1sc3.1 40 LALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYSVDVKK---------------------NLTASDMTTELEA 93 (261)
T ss_dssp EEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCEEEEEE---------------------SCCHHHHHHHHHH
T ss_pred EEEEEeccccCCCccCCChHHHHHHHHHHHHHCCCEEEEee---------------------CCCHHHHHHHHHH
Confidence 3788884 6765555665 77888888999999987653 2566788888764
No 26
>d1yx1a1 c.1.15.7 (A:3-252) Hypothetical protein PA2260 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=42.75 E-value=52 Score=27.16 Aligned_cols=107 Identities=11% Similarity=0.027 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHHhCCCEE-EeecCcccccccCCCCCCCChHHHHHHHHhcCCccCeEEEEeccccccc-cCCCCHHHHH
Q 016934 117 HIGHRELAIQASKIGAPYL-LSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYCGNVAPVEFQIQFSS-VRHLSPQQFV 194 (380)
Q Consensus 117 HlGHq~LI~~A~~~g~~~V-vtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~vD~vv~~~F~~~Fa~-i~~ls~e~Fi 194 (380)
..||.++++.+++.|...| +.-+ .+ ..+ ....+-.++++..| +..+...++...... -..-.-+..+
T Consensus 18 ~~~~~~~l~~~a~~G~dgIEi~~~----~~-~~~----~~~~~l~~~~~~~G--L~i~~~~~~~~~~~~~~~~~~~~~~i 86 (250)
T d1yx1a1 18 SRGQASFLPLLAMAGAQRVELREE----LF-AGP----PDTEALTAAIQLQG--LECVFSSPLELWREDGQLNPELEPTL 86 (250)
T ss_dssp HHCGGGGHHHHHHHTCSEEEEEGG----GC-SSC----CCHHHHHHHHHHTT--CEEEEEEEEEEECTTSSBCTTHHHHH
T ss_pred ccCHHHHHHHHHHhCCCEEEEecc----cC-CCc----chHHHHHHHHHHcC--CEEEEecccccccCchhhHHHHHHHH
Confidence 4578899999999998866 4321 11 111 12344456788888 543332232211110 0000112223
Q ss_pred HHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEE
Q 016934 195 EKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACI 238 (380)
Q Consensus 195 e~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~i 238 (380)
+ +.+.|+++.|++...+. ....+...+.++++++|+.+.+
T Consensus 87 ~-~A~~LG~~~v~~~~g~~---~~~~~l~~l~~~a~~~Gv~l~i 126 (250)
T d1yx1a1 87 R-RAEACGAGWLKVSLGLL---PEQPDLAALGRRLARHGLQLLV 126 (250)
T ss_dssp H-HHHHTTCSEEEEEEECC---CSSCCHHHHHHHHTTSSCEEEE
T ss_pred H-HHHHhCCCEEEEeeccc---chhHHHHHHHHHHHHcCCEEEE
Confidence 3 56789999998865432 2345688999999999997643
No 27
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=34.35 E-value=69 Score=27.30 Aligned_cols=105 Identities=10% Similarity=0.115 Sum_probs=59.2
Q ss_pred HHHHHHHHHhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCCcc-CeEEEEeccccccccCCCCHHHHHHH--H
Q 016934 121 RELAIQASKIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAPYC-GNVAPVEFQIQFSSVRHLSPQQFVEK--L 197 (380)
Q Consensus 121 q~LI~~A~~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~~v-D~vv~~~F~~~Fa~i~~ls~e~Fie~--L 197 (380)
+++++.+.+.|...++.. ........++.+||+++++..-..+ +.+.++. .+...+.++=++. .
T Consensus 31 ~~~i~~li~~Gv~Gi~v~-------G~tGE~~~Ls~eEr~~l~~~~~~~~~~~~~vi~------g~~~~s~~~~i~~a~~ 97 (296)
T d1xxxa1 31 ARLANHLVDQGCDGLVVS-------GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA------GAGTYDTAHSIRLAKA 97 (296)
T ss_dssp HHHHHHHHHTTCSEEEES-------STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE------ECCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-------eeccchhhCCHHHHHHHHHHHHHHhccccceEe------ccccchhHHHHHHHHH
Confidence 567777777787765432 1122345678888987765531101 1111110 1113565665553 5
Q ss_pred HHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEE
Q 016934 198 SRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACI 238 (380)
Q Consensus 198 ~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~i 238 (380)
.+.++++.+.+..-+.|.....+=++..+++++..++.+.+
T Consensus 98 a~~~Gad~v~i~~P~~~~~~~~~l~~~~~~v~~~~~~pi~l 138 (296)
T d1xxxa1 98 CAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLL 138 (296)
T ss_dssp HHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEE
T ss_pred HHHhcCCeEEEEeccCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 66889999999988887654433344456666665555443
No 28
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}
Probab=33.39 E-value=72 Score=23.31 Aligned_cols=48 Identities=21% Similarity=0.268 Sum_probs=27.4
Q ss_pred HHHHHHHhhCccEEEEcCCCCCC-CC--CCCCHHHHHHHHhhcCcEEEEEc
Q 016934 193 FVEKLSRELGVRGVVAGENYRFG-YK--AAGDASELVRLCEEYGMDACIIN 240 (380)
Q Consensus 193 Fie~L~~~L~vk~IVVG~DFrFG-~~--r~Gd~~~Lk~l~~~~G~~v~iV~ 240 (380)
.++.++++.++..+|||.-.... .. .+..+....+..++.+++|+.++
T Consensus 42 ~l~~ii~e~~i~~iVvGlP~~~dG~~~~~~~~v~~f~~~L~~~~lpv~~~D 92 (98)
T d1iv0a_ 42 ALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWD 92 (98)
T ss_dssp HHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHhhccceeEcccccccCCCcCHHHHHHHHHHHHHhhCCCCEEEEc
Confidence 34557788899999999755432 11 11122333322345677776664
No 29
>d1m65a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]}
Probab=33.12 E-value=18 Score=28.73 Aligned_cols=67 Identities=18% Similarity=0.177 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchHHHH
Q 016934 190 PQQFVEKLSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSSTRVR 269 (380)
Q Consensus 190 ~e~Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST~IR 269 (380)
.+++++ +.+++++. +++|.|.++ ....|+++...++.++.|++...| -.-|..++.
T Consensus 172 ~~~~l~-~a~~~g~~-~v~~SDaH~-~~~~g~~~~~~~~~~~~g~~~~~v---------------------~~~~~~~~~ 227 (244)
T d1m65a_ 172 CREVAA-AVRDAGGW-VALGSDSHT-AFTMGEFEECLKILDAVDFPPERI---------------------LNVSPRRLL 227 (244)
T ss_dssp HHHHHH-HHHHHTCC-EEEECCBSS-GGGTTCCHHHHHHHHHTTCCGGGB---------------------GGGCHHHHH
T ss_pred HHHHHH-HHHHCCCc-EEEECCcCC-HhhhhhHHHHHHHHHHcCCCHHHe---------------------eeCCHHHHH
Confidence 344555 56778886 699999985 456689999999988888752211 113677888
Q ss_pred HHHHcCCchhh
Q 016934 270 QALAMGDMKYV 280 (380)
Q Consensus 270 ~~L~~GdI~~A 280 (380)
+.|++-.++..
T Consensus 228 ~~l~~~~~~~~ 238 (244)
T d1m65a_ 228 NFLESRGMAPI 238 (244)
T ss_dssp HHHHHTTCCCC
T ss_pred HHHHHcCCCCH
Confidence 88887554433
No 30
>d1vhxa_ c.55.3.8 (A:) Hypothetical protein YrrK (RuvX) {Bacillus subtilis [TaxId: 1423]}
Probab=32.12 E-value=38 Score=26.55 Aligned_cols=63 Identities=11% Similarity=0.196 Sum_probs=39.4
Q ss_pred HHHHHHHhhCccEEEEcCCCCCCCCCCCCHH--H----HHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchH
Q 016934 193 FVEKLSRELGVRGVVAGENYRFGYKAAGDAS--E----LVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSST 266 (380)
Q Consensus 193 Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd~~--~----Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST 266 (380)
-+..++++.++..||||.-+.-. +.-+.. . .+.+.+.++++|+.++ ++.||.
T Consensus 45 ~l~~ii~e~~i~~iViGlP~~~d--g~~~~~~~~~~~f~~~l~~~~~i~V~~~D--------------------Er~TS~ 102 (140)
T d1vhxa_ 45 RLSELIKDYTIDKIVLGFPKNMN--GTVGPRGEASQTFAKVLETTYNVPVVLWD--------------------ERLTTM 102 (140)
T ss_dssp HHHHHHTTSEEEEEEEECCCCBT--TBCCHHHHHHHHHHHHHHHHHCSCEEEEC--------------------CSSCHH
T ss_pred HHHHHHHhhccceEEEecccccC--CcchhHHHHHHHHHHHhccCCCccEEEee--------------------cccCHH
Confidence 35557888899999999875432 221111 1 2344556688876663 678888
Q ss_pred HHHHHHHcCCc
Q 016934 267 RVRQALAMGDM 277 (380)
Q Consensus 267 ~IR~~L~~GdI 277 (380)
..++.+.+..+
T Consensus 103 ~A~~~l~~~~~ 113 (140)
T d1vhxa_ 103 AAEKMLIAADV 113 (140)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 88777765433
No 31
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}
Probab=27.99 E-value=76 Score=25.55 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=23.5
Q ss_pred CCCCCCCCCHHHHHHHHhhcCcEEEEEcce
Q 016934 213 RFGYKAAGDASELVRLCEEYGMDACIINSV 242 (380)
Q Consensus 213 rFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v 242 (380)
.+++.+..+.+.++++.++.||++.....+
T Consensus 148 ~~~h~~~~~~~~l~~~l~~~Gf~i~~~~~~ 177 (225)
T d2p7ia1 148 AHGHRCTYALDTLERDASRAGLQVTYRSGI 177 (225)
T ss_dssp HTTCCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred ceeeeeccCHHHHHHHHHHCCCEEEEEEEE
Confidence 455667778999999999999997665544
No 32
>d1nu0a_ c.55.3.8 (A:) Hypothetical protein YqgF (RuvX) {Escherichia coli [TaxId: 562]}
Probab=24.61 E-value=16 Score=28.81 Aligned_cols=48 Identities=13% Similarity=0.286 Sum_probs=28.7
Q ss_pred HHHHHHHhhCccEEEEcCCCCCCCCCCCC-HHHH----HHHHhhcCcEEEEEcc
Q 016934 193 FVEKLSRELGVRGVVAGENYRFGYKAAGD-ASEL----VRLCEEYGMDACIINS 241 (380)
Q Consensus 193 Fie~L~~~L~vk~IVVG~DFrFG~~r~Gd-~~~L----k~l~~~~G~~v~iV~~ 241 (380)
-++.+++..++..+|||.-...-- ..+. .... +++.++++++|+.++.
T Consensus 44 ~l~~i~~e~~~~~iVvG~P~~~~g-~~~~~~~~v~~f~~~L~~~~~i~V~~~DE 96 (138)
T d1nu0a_ 44 IIERLLKEWQPDEIIVGLPLNMDG-TEQPLTARARKFANRIHGRFGVEVKLHDE 96 (138)
T ss_dssp HHHHHHHHHCCSEEEEEEEECTTS-CBCHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHhhccCccEEEeeccccccc-chHHHHHHHHHHHHHHhhccCCCeEEEec
Confidence 355577888999999997654321 1121 2222 3444567888877753
No 33
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=24.29 E-value=76 Score=26.79 Aligned_cols=126 Identities=16% Similarity=0.118 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcCC----ccCeEEEEeccccccccCCCCHHHH
Q 016934 118 IGHRELAIQASKIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWAP----YCGNVAPVEFQIQFSSVRHLSPQQF 193 (380)
Q Consensus 118 lGHq~LI~~A~~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg~----~vD~vv~~~F~~~Fa~i~~ls~e~F 193 (380)
-+-+++++.+.+.|...++.. ......+.++.+||.++++.... .+. +++- +...+.++=
T Consensus 22 ~~~~~~i~~l~~~Gv~Gi~v~-------GstGE~~~Ls~~Er~~~~~~~~~~~~~~~~-vi~g--------v~~~st~~a 85 (295)
T d1o5ka_ 22 ESYERLVRYQLENGVNALIVL-------GTTGESPTVNEDEREKLVSRTLEIVDGKIP-VIVG--------AGTNSTEKT 85 (295)
T ss_dssp HHHHHHHHHHHHTTCCEEEES-------SGGGTGGGCCHHHHHHHHHHHHHHHTTSSC-EEEE--------CCCSCHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-------eeccchhhCCHHHHHHHhhhhccccccCCc-eEee--------cccccHHHH
Confidence 345677888777787765432 11122346788889887654321 121 2221 113455554
Q ss_pred HHH--HHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchHHHHHH
Q 016934 194 VEK--LSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSSTRVRQA 271 (380)
Q Consensus 194 ie~--L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST~IR~~ 271 (380)
++. ..+++|++.+.+..-|.+.....+=.+..+++++.-+..+.+...-. ..+..+|...+.++
T Consensus 86 i~~a~~A~~~Gad~v~v~pP~y~~~s~~~i~~~~~~ia~a~~~pi~iYn~P~--------------~~g~~~~~~~~~~l 151 (295)
T d1o5ka_ 86 LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPG--------------RTGVNVLPETAARI 151 (295)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHH--------------HHSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhccCCCeeEEeccc--------------hhcccchhHHHHHH
Confidence 543 46788999999998876654333333444555655555544331100 01356888888887
Q ss_pred HH
Q 016934 272 LA 273 (380)
Q Consensus 272 L~ 273 (380)
++
T Consensus 152 ~~ 153 (295)
T d1o5ka_ 152 AA 153 (295)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 34
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=23.67 E-value=1.9e+02 Score=24.00 Aligned_cols=124 Identities=12% Similarity=0.050 Sum_probs=70.9
Q ss_pred HHHHHHHHHhCCCEEEeecCcccccccCCCCCCCChHHHHHHHHhcC----CccCeEEEEeccccccccCCCCHHHHHHH
Q 016934 121 RELAIQASKIGAPYLLSFIGMAEVFGWEPRAPIVAKCDRKRVLSSWA----PYCGNVAPVEFQIQFSSVRHLSPQQFVEK 196 (380)
Q Consensus 121 q~LI~~A~~~g~~~VvtF~~P~~vl~~~~~~~l~s~~~R~~lL~~lg----~~vD~vv~~~F~~~Fa~i~~ls~e~Fie~ 196 (380)
.++++...+.|...++..- .......++.+||.++++... ..+. +++ - +...+.++=++.
T Consensus 27 ~~~i~~l~~~Gv~gl~~~G-------~tGE~~~Ls~~Er~~l~~~~~~~~~~~~~-vi~-g-------v~~~s~~~~i~~ 90 (292)
T d1xkya1 27 TKLVNYLIDNGTTAIVVGG-------TTGESPTLTSEEKVALYRHVVSVVDKRVP-VIA-G-------TGSNNTHASIDL 90 (292)
T ss_dssp HHHHHHHHHTTCCEEEESS-------TTTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEE-E-------CCCSCHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECe-------EccchhhCCHHHHHHHHHHHHHHhCCCce-EEE-e-------cCcccHHHHHHH
Confidence 5566666677777654321 112234678889988765542 1121 111 1 113555555543
Q ss_pred --HHHhhCccEEEEcCCCCCCCCCCCCHHHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchHHHHHHHHc
Q 016934 197 --LSRELGVRGVVAGENYRFGYKAAGDASELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSSTRVRQALAM 274 (380)
Q Consensus 197 --L~~~L~vk~IVVG~DFrFG~~r~Gd~~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST~IR~~L~~ 274 (380)
..++++++.+.+..-|.|.....+=++..+++++..++.+.+-.--.. .+..+|...++++.+.
T Consensus 91 a~~a~~~Gad~ilv~pP~~~~~s~~~i~~~~~~v~~~~~~pi~iYn~P~~--------------~~~~~~~~~~~~l~~~ 156 (292)
T d1xkya1 91 TKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR--------------SIVQISVDTVVRLSEI 156 (292)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHH--------------HSSCCCHHHHHHHHTS
T ss_pred HHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHhccCCCcEEEEeCCcc--------------cCCccCHHHHhhhccC
Confidence 456889999999988877654444455566777776666554321000 1246788788776543
No 35
>d1r9la_ c.94.1.1 (A:) Glycine betaine-binding periplasmic protein ProX {Escherichia coli [TaxId: 562]}
Probab=22.87 E-value=21 Score=30.59 Aligned_cols=39 Identities=21% Similarity=0.184 Sum_probs=28.6
Q ss_pred HHHHHHHhhcCcEEEEEcceeccCCCCCcccCCCCccCCccchHHHHHHHHcCCchhhhh
Q 016934 223 SELVRLCEEYGMDACIINSVMDKHQDSRDIDCNDSKERGQVSSTRVRQALAMGDMKYVSE 282 (380)
Q Consensus 223 ~~Lk~l~~~~G~~v~iV~~v~~~~~~~~~~~~~~~~~~~~ISST~IR~~L~~GdI~~An~ 282 (380)
+.++++.++.|++|+.+ ..++|+.++++|+.|+|+-.-+
T Consensus 25 ei~~q~Le~~Gy~V~~~---------------------~~~~~~~~~~al~~GdiDv~~E 63 (309)
T d1r9la_ 25 LLVSRALEKLGYTVNKP---------------------SEVDYNVGYTSLASGDATFTAV 63 (309)
T ss_dssp HHHHHHHHHTTCEECCC---------------------EECCHHHHHHHHHHTSSCEEEE
T ss_pred HHHHHHHHHcCCceeee---------------------cCCChHHHHHHHHcCCCeEEEe
Confidence 44566777899997432 2368889999999999986544
Done!