BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016936
(380 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359497050|ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 410
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 283/380 (74%), Positives = 303/380 (79%), Gaps = 44/380 (11%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M QNM PFGATQLGA PLMPVQ MTQQATRHARRVYVGGLPPLANEQ IATFFSQVMTAI
Sbjct: 75 MIQNMFPFGATQLGALPLMPVQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMTAI 134
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGNSAGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGI+FEGV+VRVRRPTDYNP+
Sbjct: 135 GGNSAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIMFEGVSVRVRRPTDYNPS 194
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAAALGP QPSP+LNLAAVGL G IGGAEGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 195 LAAALGPSQPSPHLNLAAVGLMPGVIGGAEGPDRIFVGGLPYYFTEEQIRELLESFGPLR 254
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT SGQ+K+EQ
Sbjct: 255 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATVGSGQAKSEQ 314
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
++ILAQAQQHIAIQK+ALQ G+N G
Sbjct: 315 DNILAQAQQHIAIQKIALQAGGLNLPGA-------------------------------- 342
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
G LV+VVIPRP NG PGVGKVFLEY D G ++A+NALSGRKFGG
Sbjct: 343 ------------GALVHVVIPRPSPNGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGG 390
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V+A YYPEDKY++ DY A
Sbjct: 391 NVVSAVYYPEDKYYDGDYGA 410
>gi|388520789|gb|AFK48456.1| unknown [Lotus japonicus]
Length = 527
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/381 (71%), Positives = 320/381 (83%), Gaps = 5/381 (1%)
Query: 2 AQNMLPFGATQ--LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
AQN FG +Q +GA LM VQ MTQQATRHARRVY+GGLPPL NEQ+IATFFS VMTA
Sbjct: 146 AQNFSLFGISQPQIGALSLMQVQPMTQQATRHARRVYIGGLPPLTNEQSIATFFSHVMTA 205
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGNSAG GD+VVNVYINHEKKFAF+EMRTVEEASNAM+LDGI+FEGV+VRVRRPTDYNP
Sbjct: 206 IGGNSAGAGDSVVNVYINHEKKFAFLEMRTVEEASNAMSLDGIVFEGVSVRVRRPTDYNP 265
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
TLAAALGP QPSP LNL+AVGL+ G IGG +G DR+FVGGLPYYF E QI+ELL++FG L
Sbjct: 266 TLAAALGPCQPSPYLNLSAVGLSGGTIGGTDGLDRIFVGGLPYYFAEEQIRELLQAFGPL 325
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
FDLV+D++TGNSKGYGFC+YQDPAVTD+ACA+LNGLK+GDKTLTVRRAT SG SKTE
Sbjct: 326 RSFDLVRDKETGNSKGYGFCIYQDPAVTDMACASLNGLKVGDKTLTVRRATV-SGHSKTE 384
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGM--SLFGETLAKVLCLTEAITADALADDEE 297
QE I AQAQQ+I +QK+AL+ G+N G + E+ KVLCLTEAIT D L D+ E
Sbjct: 385 QEHIFAQAQQNITMQKVALEVVGLNIPGVERVPTTIDESATKVLCLTEAITTDELMDNGE 444
Query: 298 YEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRK 357
YEEI+EDMR+ECGK+GTL+NVVIPRP+ +G +TPG+GKVFLEY D AK+AL+GRK
Sbjct: 445 YEEIVEDMRDECGKFGTLMNVVIPRPNPSGEQTPGIGKVFLEYSDTAASFAAKSALNGRK 504
Query: 358 FGGNTVNAFYYPEDKYFNKDY 378
FGGN V A+YYPE+K+ N ++
Sbjct: 505 FGGNMVTAYYYPEEKFHNMEF 525
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
gi|297333961|gb|EFH64379.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/379 (71%), Positives = 307/379 (81%), Gaps = 14/379 (3%)
Query: 1 MAQNMLPF-GATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P QLGA P++PVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFSQVM+A
Sbjct: 222 MFPNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMSA 281
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGII EGV V+VRRPTDYNP
Sbjct: 282 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNP 341
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QP+PNLNLAAVGL+SG+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 342 SLAATLGPSQPNPNLNLAAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 401
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GF+LVKDR+TGNSKGY FCVYQDP+VTDIACAALNG+KMGDKTLTVRRA Q K E
Sbjct: 402 RGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGVIQPKPE 461
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE +L AQQ IA+Q++ LQ G T K++CLT+ +TAD L DDEEY
Sbjct: 462 QEEVLLHAQQQIALQRLMLQPGG-------------TPTKIVCLTQVVTADDLRDDEEYA 508
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR+E GK+G LVNVVIPRP+ + TPGVGKVFLEY D G + A++ ++GRKFG
Sbjct: 509 DIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFG 568
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A YYPEDKY DY
Sbjct: 569 GNQVVAVYYPEDKYLQGDY 587
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/379 (70%), Positives = 306/379 (80%), Gaps = 14/379 (3%)
Query: 1 MAQNMLPF-GATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P QLGA P++PVQ MTQQATRHARRVYVGGLPP ANEQ+++TFFSQVM+A
Sbjct: 222 MFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSA 281
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGII EGV V+VRRPTDYNP
Sbjct: 282 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNP 341
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QP+PNLNL AVGL+SG+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 342 SLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 401
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GF+LVKDR+TGNSKGY FCVYQDP+VTDIACAALNG+KMGDKTLTVRRA + Q K E
Sbjct: 402 RGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPE 461
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE +L AQQ IA+Q++ Q G T K++CLT+ +TAD L DDEEY
Sbjct: 462 QEEVLLYAQQQIALQRLMFQPGG-------------TPTKIVCLTQVVTADDLRDDEEYA 508
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
EI+EDMR+E GK+G LVNVVIPRP+ + TPGVGKVFLEY D G + A++ ++GRKFG
Sbjct: 509 EIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFG 568
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A YYPEDKY DY
Sbjct: 569 GNQVVAVYYPEDKYAQGDY 587
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
thaliana]
Length = 568
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/379 (70%), Positives = 306/379 (80%), Gaps = 14/379 (3%)
Query: 1 MAQNMLPF-GATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P QLGA P++PVQ MTQQATRHARRVYVGGLPP ANEQ+++TFFSQVM+A
Sbjct: 201 MFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSA 260
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGII EGV V+VRRPTDYNP
Sbjct: 261 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNP 320
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QP+PNLNL AVGL+SG+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 321 SLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 380
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GF+LVKDR+TGNSKGY FCVYQDP+VTDIACAALNG+KMGDKTLTVRRA + Q K E
Sbjct: 381 RGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPE 440
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE +L AQQ IA+Q++ Q G T K++CLT+ +TAD L DDEEY
Sbjct: 441 QEEVLLYAQQQIALQRLMFQPGG-------------TPTKIVCLTQVVTADDLRDDEEYA 487
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
EI+EDMR+E GK+G LVNVVIPRP+ + TPGVGKVFLEY D G + A++ ++GRKFG
Sbjct: 488 EIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFG 547
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A YYPEDKY DY
Sbjct: 548 GNQVVAVYYPEDKYAQGDY 566
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/378 (69%), Positives = 302/378 (79%), Gaps = 13/378 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NM P A Q GA P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFS VM AI
Sbjct: 192 MFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAI 251
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDG++FEG V+VRRP+DYNP+
Sbjct: 252 GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVVFEGGPVKVRRPSDYNPS 311
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE+QI+ELLESFG L
Sbjct: 312 LAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLR 371
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q EQ
Sbjct: 372 GFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQ 431
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ES+L AQQ IA+Q+ LQ + T KVLCLTE ++ D L DD++Y++
Sbjct: 432 ESVLLHAQQQIALQRFMLQPGALAT-------------KVLCLTEVVSVDELKDDDDYQD 478
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
ILEDMR ECGK+G L+NVVIPRP+ NG TPG+GKVFLEY D + A+ L+GRKFGG
Sbjct: 479 ILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGG 538
Query: 361 NTVNAFYYPEDKYFNKDY 378
N V A +YPE+K+ DY
Sbjct: 539 NQVIAVFYPENKFSEGDY 556
>gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 555
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/377 (70%), Positives = 302/377 (80%), Gaps = 13/377 (3%)
Query: 4 NMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
NM P ++Q GA P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFS VM AIGGN
Sbjct: 192 NMFPLASSQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGN 251
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDG+IFEG V+VRRP+DYNP+LAA
Sbjct: 252 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAA 311
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
LGP QPSPNLNLAAVG G+ GG EGPDR+FVGGLPYYFTE+QI+ELLESFG L GFD
Sbjct: 312 TLGPSQPSPNLNLAAVGSTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFD 371
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q EQES+
Sbjct: 372 LVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESV 431
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
L AQQ IA+Q+ LQ + T KVLCLTE +T D L DD++Y++ILE
Sbjct: 432 LLHAQQQIALQRFMLQPGALAT-------------KVLCLTEVVTVDELNDDDDYQDILE 478
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
DMR EC K+G LVNVVIPRP+ NG TPG+GKVFLEY D G + A+ L+GRKFGGN V
Sbjct: 479 DMRTECEKFGALVNVVIPRPNPNGVPTPGLGKVFLEYADVDGSSKARQGLNGRKFGGNQV 538
Query: 364 NAFYYPEDKYFNKDYSA 380
A +YPE+K+ DY A
Sbjct: 539 VAVFYPENKFSEGDYEA 555
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/379 (70%), Positives = 305/379 (80%), Gaps = 14/379 (3%)
Query: 1 MAQNMLPF-GATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P QLGA P++PVQ MTQQATRHA RVYVGGLPP ANEQ+++TFFSQVM+A
Sbjct: 222 MFSNMFPMVPGQQLGALPVLPVQAMTQQATRHAPRVYVGGLPPTANEQSVSTFFSQVMSA 281
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGII EGV V+VRRPTDYNP
Sbjct: 282 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNP 341
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QP+PNLNL AVGL+SG+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 342 SLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPL 401
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GF+LVKDR+TGNSKGY FCVYQDP+VTDIACAALNG+KMGDKTLTVRRA + Q K E
Sbjct: 402 RGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPE 461
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE +L AQQ IA+Q++ Q G T K++CLT+ +TAD L DDEEY
Sbjct: 462 QEEVLLYAQQQIALQRLMFQPGG-------------TPTKIVCLTQVVTADDLRDDEEYA 508
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
EI+EDMR+E GK+G LVNVVIPRP+ + TPGVGKVFLEY D G + A++ ++GRKFG
Sbjct: 509 EIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFG 568
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A YYPEDKY DY
Sbjct: 569 GNQVVAVYYPEDKYAQGDY 587
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 573
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/378 (70%), Positives = 306/378 (80%), Gaps = 13/378 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NM P + Q GA P+MP+Q MTQQATRHARRVYVGGLP ANEQ++ATFFS VM+AI
Sbjct: 207 MFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQSVATFFSHVMSAI 266
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYIN+EKKFAFVEMR+VEEASNAMALDGIIFEG +VRRP+DYNP+
Sbjct: 267 GGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPS 326
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QP+PNLNLAAVGL+ G+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 327 LAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLR 386
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K EQ
Sbjct: 387 GFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQ 446
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ES+L AQQ IA+Q++ LQ + + T KVL LTE I+AD L DDE+Y++
Sbjct: 447 ESVLLHAQQQIALQRLMLQPATLAT-------------KVLSLTEVISADELNDDEDYQD 493
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
ILEDMR ECGK+G+LVNVVIPRP NG TPGVGKVFLEY D + A+ +L+GRKFGG
Sbjct: 494 ILEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGG 553
Query: 361 NTVNAFYYPEDKYFNKDY 378
N V A +YPE+K++ DY
Sbjct: 554 NQVVAVFYPENKFYEGDY 571
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
Length = 554
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/380 (69%), Positives = 302/380 (79%), Gaps = 13/380 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NM P A Q GA P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFS VM AI
Sbjct: 186 MFSNMFPVAAGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAI 245
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDG+IFEG V+VRRP+DYNP+
Sbjct: 246 GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPS 305
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE+QI+ELLESFG L
Sbjct: 306 LAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLR 365
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA Q EQ
Sbjct: 366 GFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGITQPNPEQ 425
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ES+L AQQ IA+Q+ LQ + T K+LCLT+ ++ D L DD++Y++
Sbjct: 426 ESVLLHAQQQIALQRFMLQPGALAT-------------KILCLTQVVSVDELKDDDDYQD 472
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
ILEDMR ECGK+G L+NVVIPRP+ NG TPG+GKVFLEY D + A+ L+GRKFGG
Sbjct: 473 ILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGG 532
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V A +YPE+K+ DY A
Sbjct: 533 NQVIAVFYPENKFSEGDYEA 552
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/380 (69%), Positives = 302/380 (79%), Gaps = 13/380 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NM P A Q GA P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFS VM AI
Sbjct: 185 MFSNMFPVAAGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAI 244
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDG+IFEG V+VRRP+DYNP+
Sbjct: 245 GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPS 304
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE+QI+ELLESFG L
Sbjct: 305 LAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLR 364
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA Q EQ
Sbjct: 365 GFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGITQPNPEQ 424
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ES+L AQQ IA+Q+ LQ + T K+LCLT+ ++ D L DD++Y++
Sbjct: 425 ESVLLHAQQQIALQRFMLQPGALAT-------------KILCLTQVVSVDELKDDDDYQD 471
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
ILEDMR ECGK+G L+NVVIPRP+ NG TPG+GKVFLEY D + A+ L+GRKFGG
Sbjct: 472 ILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGG 531
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V A +YPE+K+ DY A
Sbjct: 532 NQVIAVFYPENKFSEGDYEA 551
>gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/380 (69%), Positives = 304/380 (80%), Gaps = 13/380 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NM P A Q GA P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFS VM AI
Sbjct: 185 MFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAI 244
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDG+IFEG V+VRRP+DYNP+
Sbjct: 245 GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPS 304
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE+QI+ELLESFG L
Sbjct: 305 LAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLR 364
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q EQ
Sbjct: 365 GFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTNQPNPEQ 424
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ES+L AQQ IA+Q+ LQ + T KVLCLT+ ++ D L DD++Y++
Sbjct: 425 ESVLLHAQQQIALQRFMLQPGALAT-------------KVLCLTQVVSVDELNDDDDYQD 471
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
ILEDMR ECGK+G+L+NVVIPRP+ +G TPG+GKVFLEY D + A+ L+GRKFGG
Sbjct: 472 ILEDMRVECGKFGSLLNVVIPRPNPSGEPTPGLGKVFLEYADVESSSRARQGLNGRKFGG 531
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V A +YPE+K+ +Y A
Sbjct: 532 NEVIAVFYPENKFSEGEYEA 551
>gi|224134362|ref|XP_002327819.1| predicted protein [Populus trichocarpa]
gi|222836904|gb|EEE75297.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/379 (69%), Positives = 302/379 (79%), Gaps = 10/379 (2%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P G +Q GA P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFSQVM A
Sbjct: 170 MFPNMFPLGTSQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 229
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFEG V+VRRP+DYNP
Sbjct: 230 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 289
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QP+PNLNL+AVGLA G+ GG EGPDR+FVGGLPYYFTE+QI+ELLESFG L
Sbjct: 290 SLAATLGPSQPNPNLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQIRELLESFGPL 349
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K E
Sbjct: 350 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPE 409
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE++L AQQ IA+Q++ LQ KV+CLT+ +T D L DD+EYE
Sbjct: 410 QENVLLHAQQQIALQRLMLQPQPQQQP---------VPTKVVCLTQVVTGDELKDDDEYE 460
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+ILEDMR E GK+G LVNVVIPRP NG PGVGKVFLEY D G + A+ ++GRKF
Sbjct: 461 DILEDMRTEAGKFGLLVNVVIPRPRPNGENAPGVGKVFLEYADTEGSSKARAGMNGRKFD 520
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A +YPE+K+ +Y
Sbjct: 521 GNQVVAVFYPENKFSQGEY 539
>gi|224094725|ref|XP_002310209.1| predicted protein [Populus trichocarpa]
gi|222853112|gb|EEE90659.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/379 (69%), Positives = 303/379 (79%), Gaps = 14/379 (3%)
Query: 1 MAQNMLPFGA-TQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P G Q GA P+MPVQ MTQQATRHARRVYVGGLPP+ANEQ++ATFFSQVM A
Sbjct: 27 MFPNMFPLGTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPIANEQSVATFFSQVMAA 86
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFEG V+VRRP+DYNP
Sbjct: 87 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 146
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 147 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGAL 206
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K E
Sbjct: 207 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPE 266
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE++L AQQ IA+Q++ LQ + T KV+CLT+ +T D L DD+EYE
Sbjct: 267 QENVLLHAQQQIALQRLMLQPPPVVT-------------KVVCLTQVVTVDELKDDDEYE 313
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+ILED+R E GK+G LVNVVIPRP +G PGVGKVFLEY D G + A+ ++GRKFG
Sbjct: 314 DILEDIRMEAGKFGQLVNVVIPRPRPDGENAPGVGKVFLEYADTEGSSKARAGMNGRKFG 373
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A ++PE+K+ +Y
Sbjct: 374 GNHVVAVFFPENKFSQGEY 392
>gi|168028774|ref|XP_001766902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681881|gb|EDQ68304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 486
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/375 (72%), Positives = 300/375 (80%), Gaps = 17/375 (4%)
Query: 5 MLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
M PFG TQ G P MP Q MTQQATRHARRVYVGGLPP+ANEQ IAT+FSQVM A+GGN
Sbjct: 128 MFPFGGTQQFGGLPGMPAQAMTQQATRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGN 187
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAVVNVYIN EKKFAFVEMRTVEEASNAMALDGIIFEGV+VRVRRP+DYNP++AA
Sbjct: 188 TAGPGDAVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAA 247
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
LGP QPSP+LNLAAVGL GA GGA+GPDR+FVGGLPYY TE QIKELLESFG L GFD
Sbjct: 248 TLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEVQIKELLESFGPLRGFD 307
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKDRDTGNSKGYGFCVYQDP+V DIACA LNG+KM DKTL VRRATA SGQ K +Q ++
Sbjct: 308 LVKDRDTGNSKGYGFCVYQDPSVVDIACATLNGMKMDDKTLNVRRATA-SGQPKPDQANV 366
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
LA AQQ IAIQK+ALQ +T KV+ LTE +T + L DDEEY+EI+E
Sbjct: 367 LAHAQQQIAIQKLALQA--------------KTPTKVVALTEVVTPNQLEDDEEYQEIME 412
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
DM ECGKYGTLVN VIPRP ++G PG+GKVFLEY D G + AK +L GR+F N V
Sbjct: 413 DMGTECGKYGTLVNCVIPRP-RSGENVPGLGKVFLEYSDIAGASKAKASLHGRRFDENLV 471
Query: 364 NAFYYPEDKYFNKDY 378
A YYPEDK+ DY
Sbjct: 472 VAVYYPEDKFAAGDY 486
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/383 (69%), Positives = 303/383 (79%), Gaps = 18/383 (4%)
Query: 1 MAQNMLPFGATQL---GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVM 57
M NM P +Q+ A P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFSQVM
Sbjct: 229 MFPNMFPLATSQMQQFSALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVM 288
Query: 58 TAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY 117
IGGN+AGPGDAVVNVYINH+KKFAFVEMR+VEEASNAMALDGIIFEG V+VRRPTDY
Sbjct: 289 AKIGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDY 348
Query: 118 NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFG 177
NP+LAA LGP QP+PNLNL AVGL G+ GG +GPDRVFVGGLPYYFTETQI+ELLE+FG
Sbjct: 349 NPSLAATLGPSQPNPNLNLGAVGLTPGSAGGLDGPDRVFVGGLPYYFTETQIRELLETFG 408
Query: 178 TLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT--ASSGQ 235
L GFDLVKDR+TGNSKGY FCVYQD AVTDIACAALNG+KMGDKTLTVRRA A+ Q
Sbjct: 409 PLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQGANPQQ 468
Query: 236 SKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADD 295
K EQESIL AQQ IA+QK+ LQ + + T KV+CLT A+++D L DD
Sbjct: 469 PKPEQESILMHAQQQIALQKLMLQPALVAT-------------KVVCLTHAVSSDELKDD 515
Query: 296 EEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSG 355
E+YEEIL+DMR+EC K+GTLVNVVIPRP +G GVGKVFLEY D G A+ L+G
Sbjct: 516 EDYEEILDDMRQECSKFGTLVNVVIPRPPSDGEPAAGVGKVFLEYVDIDGATKARAGLNG 575
Query: 356 RKFGGNTVNAFYYPEDKYFNKDY 378
RKF GN V A +YPE+K+ DY
Sbjct: 576 RKFDGNQVVAVFYPENKFAQGDY 598
>gi|168026451|ref|XP_001765745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682922|gb|EDQ69336.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/375 (71%), Positives = 306/375 (81%), Gaps = 16/375 (4%)
Query: 5 MLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
M PFG TQ G P MP Q MTQQATRHARRVYVGGLPP+ANEQ IAT+FSQVM A+GGN
Sbjct: 130 MFPFGGTQQFGGIPGMPAQAMTQQATRHARRVYVGGLPPMANEQTIATYFSQVMAAVGGN 189
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAVVNVYIN EKKFAFVEMRTVEEASNAMALDGI+FEGV+VRVRRP+DYNP++AA
Sbjct: 190 TAGPGDAVVNVYINQEKKFAFVEMRTVEEASNAMALDGIMFEGVSVRVRRPSDYNPSMAA 249
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
LGP QPSP+LNLAAVGL GA GGA+GPDR+FVGGLPYY TE QIKELLESFG L GFD
Sbjct: 250 TLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEIQIKELLESFGPLRGFD 309
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKDRDTGNSKGYGFCVYQDPAVTD+A AALNGLKMGDKTL+VRRA+A SGQ K +Q ++
Sbjct: 310 LVKDRDTGNSKGYGFCVYQDPAVTDVAIAALNGLKMGDKTLSVRRASA-SGQPKPDQANV 368
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
LA AQQ IAIQ M+ L ET KV+ LT+ ++ D L DDEEY++ILE
Sbjct: 369 LAHAQQQIAIQVFW-----MSPL--------ETSTKVVALTQVVSPDELKDDEEYQDILE 415
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
DM+EECGKYG L+ VVIPRP ++G + PGVGKVF+EY D G A AK +L GR+FGG++V
Sbjct: 416 DMKEECGKYGNLLRVVIPRP-RDGEDVPGVGKVFVEYSDTAGAAKAKASLHGRRFGGHSV 474
Query: 364 NAFYYPEDKYFNKDY 378
A YYPE+K+ DY
Sbjct: 475 VAVYYPEEKFAAGDY 489
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/380 (68%), Positives = 300/380 (78%), Gaps = 17/380 (4%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NM P + Q GA P+MP+Q MTQQATRHARRVYVGGLPP ANEQ++ATFFS VM AI
Sbjct: 194 MFSNMFPLTSGQFGALPVMPIQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMYAI 253
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDG+IFEG V+VRRP+DYNP+
Sbjct: 254 GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPS 313
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE+QI+ELLESFG L
Sbjct: 314 LAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLR 373
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q EQ
Sbjct: 374 GFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTPQPNPEQ 433
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ES+L AQQ IA+QK Q + T KVLCLT+A++ D L DD++Y++
Sbjct: 434 ESVLLHAQQQIALQKFMFQPGALAT-------------KVLCLTQAVSVDELNDDDDYQD 480
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
ILEDMR ECGK+G L+NVVIPRP+ NG TPG+GK Y D G + A+ L+GRKFGG
Sbjct: 481 ILEDMRTECGKFGALLNVVIPRPNPNGEPTPGIGK----YADVDGSSKARQGLNGRKFGG 536
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V A +YPE+K+ DY A
Sbjct: 537 NQVVAVFYPENKFSEGDYEA 556
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/375 (70%), Positives = 297/375 (79%), Gaps = 14/375 (3%)
Query: 4 NMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
NM QLGA P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFS VM+AIGGN
Sbjct: 208 NMFSLPTGQLGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMSAIGGN 267
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFEG V+VRRP+DYNP+LAA
Sbjct: 268 TAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAA 327
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
LGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L GFD
Sbjct: 328 TLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEGQIRELLESFGPLRGFD 387
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA Q K EQES+
Sbjct: 388 LVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGVTQPKPEQESV 447
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
L AQQ IA+QK+ LQ + T KVLCLT+ ++AD L DDE+Y +ILE
Sbjct: 448 LLHAQQQIALQKLMLQPGTLAT-------------KVLCLTQVVSADELRDDEDYADILE 494
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
DMR ECGK+ TLVN+VIPRP G TPGVGKVFLEY D A+ L GR+FGGN V
Sbjct: 495 DMRLECGKF-TLVNLVIPRPSPTGDPTPGVGKVFLEYADVESANKARQGLHGRRFGGNQV 553
Query: 364 NAFYYPEDKYFNKDY 378
A +YPE+++ DY
Sbjct: 554 VAVFYPENRFSQGDY 568
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/383 (68%), Positives = 303/383 (79%), Gaps = 18/383 (4%)
Query: 1 MAQNMLPFGATQL---GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVM 57
M NM P Q+ A P++PVQ MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM
Sbjct: 255 MFPNMFPLPTNQVQPFSALPVLPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVM 314
Query: 58 TAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY 117
IGGN+AGPGDAVVNVYINH+KKFAFVEMR+VEEASNAMALDGIIFEG V+VRRPTDY
Sbjct: 315 ATIGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDY 374
Query: 118 NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFG 177
NP+LAAALGP QP+PNLNL VGL+ G+ GG +GPDR+FVGG+PYYFTETQI+ELLE+FG
Sbjct: 375 NPSLAAALGPSQPNPNLNLGLVGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFG 434
Query: 178 TLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSG--Q 235
L GFDLVKDR+TGNSKGY FCVYQD AVTDIACAALNG+KMGDKTLTVRRA ++ Q
Sbjct: 435 PLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQ 494
Query: 236 SKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADD 295
K EQESIL AQQ IA+QK+ LQ + + T KVLCLT A++ D L DD
Sbjct: 495 PKPEQESILMHAQQQIALQKLMLQPALVAT-------------KVLCLTHAVSPDELKDD 541
Query: 296 EEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSG 355
E+YEEIL+DMR+EC K+G LVNVVIPRP +G PGVGKVFLEY D G A++ L+G
Sbjct: 542 EDYEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARSGLNG 601
Query: 356 RKFGGNTVNAFYYPEDKYFNKDY 378
RKFGGN V A +YPE+K+ DY
Sbjct: 602 RKFGGNQVIAVFYPENKFAQGDY 624
>gi|356517814|ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
Length = 605
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/383 (69%), Positives = 302/383 (78%), Gaps = 18/383 (4%)
Query: 1 MAQNMLPFGATQL---GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVM 57
M NM P Q+ A P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFSQVM
Sbjct: 234 MFPNMFPLATNQMQQFSALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVM 293
Query: 58 TAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY 117
IGGN+AGPGDAVVNVYINH+KKFAFVEMR+VEEASNAMALDGIIFEG V+VRRPTDY
Sbjct: 294 AKIGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDY 353
Query: 118 NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFG 177
NP+LAA LGP QP+PNLNL AVGL G+ GG +GPDR+FVGGLPYYFTETQI+ELLE+FG
Sbjct: 354 NPSLAATLGPSQPNPNLNLGAVGLTPGSAGGLDGPDRIFVGGLPYYFTETQIRELLETFG 413
Query: 178 TLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT--ASSGQ 235
L GFDLVKDR+TGNSKGY FCVYQD AVTDIACAALNG+KMGDKTLTVRRA A+ Q
Sbjct: 414 PLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQGANPQQ 473
Query: 236 SKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADD 295
K EQESIL AQQ IA+QK+ LQ + + T KV+CLT A+++D L DD
Sbjct: 474 PKPEQESILMHAQQQIALQKLMLQPALVAT-------------KVVCLTHAVSSDELKDD 520
Query: 296 EEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSG 355
E+Y+EIL+DMR+EC K+GTLVNVVIPRP +G GVGKVFLEY D G A+ L+G
Sbjct: 521 EDYDEILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVFLEYVDIDGATKARAGLNG 580
Query: 356 RKFGGNTVNAFYYPEDKYFNKDY 378
RKF GN V A +YPE+K+ DY
Sbjct: 581 RKFDGNQVVAVFYPENKFAQGDY 603
>gi|359476715|ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/378 (69%), Positives = 298/378 (78%), Gaps = 13/378 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NM P + Q GA P+MPVQ MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM+AI
Sbjct: 202 MFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAI 261
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFEG V+VRRP+DYNP+
Sbjct: 262 GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS 321
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 322 LAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLR 381
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K EQ
Sbjct: 382 GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQ 441
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
E++L AQQ IA+Q++ Q + T KV+CLT+ + AD L DDE YE+
Sbjct: 442 ENVLLHAQQQIALQRLMFQPGALAT-------------KVVCLTQVVNADELQDDEAYED 488
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I+EDMR E GK+G LVNV IPRP NG TPG+GKVFLEY D G A+ L+GRKF G
Sbjct: 489 IVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDG 548
Query: 361 NTVNAFYYPEDKYFNKDY 378
N V A +YPE+K+ +Y
Sbjct: 549 NQVVAVFYPENKFSQGEY 566
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/378 (69%), Positives = 298/378 (78%), Gaps = 13/378 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NM P + Q GA P+MPVQ MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM+AI
Sbjct: 199 MFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAI 258
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFEG V+VRRP+DYNP+
Sbjct: 259 GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS 318
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 319 LAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLR 378
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K EQ
Sbjct: 379 GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQ 438
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
E++L AQQ IA+Q++ Q + T KV+CLT+ + AD L DDE YE+
Sbjct: 439 ENVLLHAQQQIALQRLMFQPGALAT-------------KVVCLTQVVNADELQDDEAYED 485
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I+EDMR E GK+G LVNV IPRP NG TPG+GKVFLEY D G A+ L+GRKF G
Sbjct: 486 IVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDG 545
Query: 361 NTVNAFYYPEDKYFNKDY 378
N V A +YPE+K+ +Y
Sbjct: 546 NQVVAVFYPENKFSQGEY 563
>gi|297735185|emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/378 (69%), Positives = 298/378 (78%), Gaps = 13/378 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NM P + Q GA P+MPVQ MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM+AI
Sbjct: 27 MFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAI 86
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFEG V+VRRP+DYNP+
Sbjct: 87 GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPS 146
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 147 LAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLR 206
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K EQ
Sbjct: 207 GFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQ 266
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
E++L AQQ IA+Q++ Q + T KV+CLT+ + AD L DDE YE+
Sbjct: 267 ENVLLHAQQQIALQRLMFQPGALAT-------------KVVCLTQVVNADELQDDEAYED 313
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I+EDMR E GK+G LVNV IPRP NG TPG+GKVFLEY D G A+ L+GRKF G
Sbjct: 314 IVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDG 373
Query: 361 NTVNAFYYPEDKYFNKDY 378
N V A +YPE+K+ +Y
Sbjct: 374 NQVVAVFYPENKFSQGEY 391
>gi|302816055|ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 277/388 (71%), Positives = 315/388 (81%), Gaps = 13/388 (3%)
Query: 4 NMLPFGATQ-----LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMT 58
+M PF TQ P MP Q MTQQATRHARRVYVGGLPPLANEQ IATFFSQVM+
Sbjct: 29 SMFPFAGTQARLLFFAGLPTMPAQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMS 88
Query: 59 AIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYN 118
AIGGN+AGPGDAVVNVYIN EKKFAFVEMRTVEEASNAMALDGIIFEGV+VRVRRP+DYN
Sbjct: 89 AIGGNTAGPGDAVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYN 148
Query: 119 PTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGT 178
P++AA LGP QPSP+LNLAAVGL GA GGA+GPDR+FVGGLPYY TE QIKELLESFG
Sbjct: 149 PSMAATLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEGQIKELLESFGP 208
Query: 179 LHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAS--SGQS 236
L GFDLVKDRDTGNSKGYGFCVYQDPAVTD+ACAALNGLKMGDKTLTVRRATAS SGQ
Sbjct: 209 LRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVACAALNGLKMGDKTLTVRRATASVHSGQP 268
Query: 237 KTEQESILAQAQQHIAIQKMALQTSG-----MNTLGGGMSLFGETLAKVLCLTEAITADA 291
K +Q ++LAQAQQ IA+QK+ALQ + M + GM++ ET KV+CL + ++ D
Sbjct: 269 KPDQANVLAQAQQQIALQKLALQGAPYYNMMMPGVDNGMTM-PETPTKVVCLKQVVSPDE 327
Query: 292 LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKN 351
L +D+EYEEILEDMREECGKYG++ +V+PRP +G E GVGKVF+EY AKN
Sbjct: 328 LKEDDEYEEILEDMREECGKYGSVATLVLPRPKSDGEEVAGVGKVFVEYATIEEAIKAKN 387
Query: 352 ALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
+L+GRKFGGN V A Y+PEDK+ +Y+
Sbjct: 388 SLNGRKFGGNIVAAVYFPEDKFLQGEYN 415
>gi|297798226|ref|XP_002866997.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
gi|297312833|gb|EFH43256.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
Length = 567
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/381 (68%), Positives = 297/381 (77%), Gaps = 14/381 (3%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P Q G +MP+Q MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM A
Sbjct: 200 MFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAA 259
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
+GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAM+LDGIIFEG V+VRRP+DYNP
Sbjct: 260 VGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNP 319
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QPSP+LNLAAVGL GA GG EGPDR+FVGGLPYYFTE+Q++ELLESFG L
Sbjct: 320 SLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGAL 379
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K E
Sbjct: 380 KGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMQPKPE 439
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QES+L AQQ IA Q++ LQ M T V+CLT+ +T D L DDEEYE
Sbjct: 440 QESVLLHAQQQIAFQRIMLQPGVMATT-------------VVCLTQVVTEDELRDDEEYE 486
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR+E GK+G L NVVIPRP NG PG+GKVFL+Y D G A+ ++GRKFG
Sbjct: 487 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVPGLGKVFLKYADTDGSTRARTGMNGRKFG 546
Query: 360 GNTVNAFYYPEDKYFNKDYSA 380
GN V A YYPEDK+ DY A
Sbjct: 547 GNEVVAVYYPEDKFEQGDYGA 567
>gi|449441167|ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/381 (69%), Positives = 300/381 (78%), Gaps = 15/381 (3%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M M P Q GA P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFSQVM A
Sbjct: 221 MFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 280
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFEG V+VRRP+DYNP
Sbjct: 281 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 340
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 341 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 400
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K E
Sbjct: 401 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 460
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QES+L AQQ IA+QK+ LQ ++T KVLCLT+ +T + L +DE+YE
Sbjct: 461 QESVLLHAQQQIALQKLMLQPGAVST-------------KVLCLTQVVTPEELINDEDYE 507
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR E GK+GTLVNVVIPRP N PGVGKVFLEY D A+ L+GRKFG
Sbjct: 508 DIMEDMRGEGGKFGTLVNVVIPRPRPNEA-APGVGKVFLEYADIDSATKARAGLNGRKFG 566
Query: 360 GNTVNAFYYPEDKYFNKDYSA 380
GN V A +YPE+K+ +Y A
Sbjct: 567 GNQVMAVFYPENKFAQGEYDA 587
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/381 (69%), Positives = 300/381 (78%), Gaps = 15/381 (3%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M M P Q GA P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFSQVM A
Sbjct: 221 MFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 280
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFEG V+VRRP+DYNP
Sbjct: 281 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 340
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 341 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 400
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K E
Sbjct: 401 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 460
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QES+L AQQ IA+QK+ LQ ++T KVLCLT+ +T + L +DE+YE
Sbjct: 461 QESVLLHAQQQIALQKLMLQPGAVST-------------KVLCLTQVVTPEELINDEDYE 507
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR E GK+GTLVNVVIPRP N PGVGKVFLEY D A+ L+GRKFG
Sbjct: 508 DIMEDMRGEGGKFGTLVNVVIPRPRPNEA-APGVGKVFLEYADIDSATKARAGLNGRKFG 566
Query: 360 GNTVNAFYYPEDKYFNKDYSA 380
GN V A +YPE+K+ +Y A
Sbjct: 567 GNQVMAVFYPENKFAQGEYDA 587
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/384 (68%), Positives = 302/384 (78%), Gaps = 19/384 (4%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P Q A P++PVQ MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM
Sbjct: 255 MFPNMFPLPTNQPFSALPVLPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAT 314
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINH+KKFAFVEMR+VEEASNAMALDGIIFEG V+VRRPTDYNP
Sbjct: 315 IGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNP 374
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAAALGP QP+PNLNL VGL+ G+ GG +GPDR+FVGG+PYYFTETQI+ELLE+FG L
Sbjct: 375 SLAAALGPSQPNPNLNLGLVGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPL 434
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSG--QSK 237
GFDLVKDR+TGNSKGY FCVYQD AVTDIACAALNG+KMGDKTLTVRRA ++ Q K
Sbjct: 435 RGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPK 494
Query: 238 TEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEE 297
EQESIL AQQ IA+QK+ LQ + + T KVLCLT A++ D L DDE+
Sbjct: 495 PEQESILMHAQQQIALQKLMLQPALVAT-------------KVLCLTHAVSPDELKDDED 541
Query: 298 YEEILEDMREECGKYG---TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALS 354
YEEIL+DMR+EC K+G LVNVVIPRP +G PGVGKVFLEY D G A++ L+
Sbjct: 542 YEEILDDMRQECSKFGNICNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARSGLN 601
Query: 355 GRKFGGNTVNAFYYPEDKYFNKDY 378
GRKFGGN V A +YPE+K+ DY
Sbjct: 602 GRKFGGNQVIAVFYPENKFAQGDY 625
>gi|357470349|ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355506514|gb|AES87656.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 634
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/378 (68%), Positives = 298/378 (78%), Gaps = 16/378 (4%)
Query: 4 NMLPFGATQL---GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
NM P GA Q+ A P+MP+Q MTQQATRHARRVYVGGLPP ANEQ++A FFSQVM I
Sbjct: 268 NMFPMGANQMPQFSALPMMPIQAMTQQATRHARRVYVGGLPPTANEQSVAIFFSQVMANI 327
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAVVNVYINH+KKFAFVEMR+VEEASNAMALDGIIFEG V+VRRPTDYNP+
Sbjct: 328 GGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPS 387
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAA LGP QP+PNLNL AVGL G+ GG EGPDR+FVGGLPYYFTETQI+ELLE+FG L
Sbjct: 388 LAATLGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTETQIRELLETFGPLR 447
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVY D AVTDIACAALNG+KMGDKTLTVRRA + Q K EQ
Sbjct: 448 GFDLVKDRETGNSKGYAFCVYADLAVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQ 507
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ESIL AQQ IA+QK+ Q + + T KV+CLT A+ + L +DE++EE
Sbjct: 508 ESILMHAQQQIALQKLIFQPALVAT-------------KVVCLTNAVAPEELKEDEDFEE 554
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I++DMR+EC K+G+LVNVVIPRP +G + GVGKVFLEY D G A+ L+GRKFGG
Sbjct: 555 IIDDMRQECSKFGSLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGG 614
Query: 361 NTVNAFYYPEDKYFNKDY 378
N V A +Y E+K+ DY
Sbjct: 615 NEVIAVFYSENKFAQGDY 632
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/386 (68%), Positives = 303/386 (78%), Gaps = 21/386 (5%)
Query: 1 MAQNMLPFGATQL---GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVM 57
M NM P Q+ A P++PVQ MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM
Sbjct: 255 MFPNMFPLPTNQVQPFSALPVLPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVM 314
Query: 58 TAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY 117
IGGN+AGPGDAVVNVYINH+KKFAFVEMR+VEEASNAMALDGIIFEG V+VRRPTDY
Sbjct: 315 ATIGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDY 374
Query: 118 NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFG 177
NP+LAAALGP QP+PNLNL VGL+ G+ GG +GPDR+FVGG+PYYFTETQI+ELLE+FG
Sbjct: 375 NPSLAAALGPSQPNPNLNLGLVGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFG 434
Query: 178 TLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSG--Q 235
L GFDLVKDR+TGNSKGY FCVYQD AVTDIACAALNG+KMGDKTLTVRRA ++ Q
Sbjct: 435 PLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQ 494
Query: 236 SKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADD 295
K EQESIL AQQ IA+QK+ LQ + + T KVLCLT A++ D L DD
Sbjct: 495 PKPEQESILMHAQQQIALQKLMLQPALVAT-------------KVLCLTHAVSPDELKDD 541
Query: 296 EEYEEILEDMREECGKYG---TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNA 352
E+YEEIL+DMR+EC K+G LVNVVIPRP +G PGVGKVFLEY D G A++
Sbjct: 542 EDYEEILDDMRQECSKFGNICNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARSG 601
Query: 353 LSGRKFGGNTVNAFYYPEDKYFNKDY 378
L+GRKFGGN V A +YPE+K+ DY
Sbjct: 602 LNGRKFGGNQVIAVFYPENKFAQGDY 627
>gi|302820212|ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/386 (70%), Positives = 307/386 (79%), Gaps = 10/386 (2%)
Query: 4 NMLPFGATQ-----LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMT 58
+M PF TQ P MP Q MTQQATRHARRVYVGGLPPLANEQ IATFFSQVM+
Sbjct: 29 SMFPFAGTQASLLFFAGLPTMPAQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMS 88
Query: 59 AIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYN 118
AIGGN+AGPGDAVVNVYIN EKKFAFVEMRTVEEASNAMALDGIIFEGV+VRVRRP+DYN
Sbjct: 89 AIGGNTAGPGDAVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYN 148
Query: 119 PTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGT 178
P++AA LGP QPSP+LNLAAVGL GA GGA+GPDR+FVGGLPYY TE QIKELLESFG
Sbjct: 149 PSMAATLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEGQIKELLESFGP 208
Query: 179 LHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAS--SGQS 236
L GFDLVKDRDTGNSKGYGFCVYQDPAVTD+ACAALNGLKMGDKTLTVRRATAS SGQ
Sbjct: 209 LRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVACAALNGLKMGDKTLTVRRATASVHSGQP 268
Query: 237 KTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMS---LFGETLAKVLCLTEAITADALA 293
K +Q ++LAQAQQ IA+Q N + G+ ET KV+CL + ++ D L
Sbjct: 269 KPDQANVLAQAQQQIALQLALQGAPYYNMMMPGVDNGMTMPETPTKVVCLKQVVSPDELK 328
Query: 294 DDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNAL 353
+D+EYEEILEDMREECGKYG++ +V+PRP NG E GVGKVF+EY AKN+L
Sbjct: 329 EDDEYEEILEDMREECGKYGSVATLVLPRPKSNGEEVAGVGKVFVEYATIEEAIKAKNSL 388
Query: 354 SGRKFGGNTVNAFYYPEDKYFNKDYS 379
+GRKFGGN V A Y+PEDK+ +Y+
Sbjct: 389 NGRKFGGNIVAAVYFPEDKFLQGEYN 414
>gi|168021052|ref|XP_001763056.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685868|gb|EDQ72261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/376 (70%), Positives = 302/376 (80%), Gaps = 13/376 (3%)
Query: 5 MLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
M PFG TQ G P MP Q MTQQATRHARRVYVGGLPPLANEQ IAT+FSQVM A+GGN
Sbjct: 137 MFPFGGTQQFGGIPGMPAQAMTQQATRHARRVYVGGLPPLANEQTIATYFSQVMAAVGGN 196
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAVVNVYIN EKKFAFVEMRTVEEASNAMALDGI+FEGV+VRVRRP+DYNP++AA
Sbjct: 197 TAGPGDAVVNVYINQEKKFAFVEMRTVEEASNAMALDGIMFEGVSVRVRRPSDYNPSMAA 256
Query: 124 ALGPGQPSPNLNLAAVGLASG-AIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
LGP QPSP+LNLAAVGL G A GGA+GPDR+FVGGLPYY TE QIKELLESFG L GF
Sbjct: 257 TLGPSQPSPHLNLAAVGLTPGNAAGGADGPDRIFVGGLPYYLTEIQIKELLESFGPLRGF 316
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQES 242
DLVKDRDTGNSKGYGFCVYQDP+V DIACA LNG+KM DKTL VRRATA + K +Q +
Sbjct: 317 DLVKDRDTGNSKGYGFCVYQDPSVVDIACATLNGMKMDDKTLNVRRATARLARPKPDQAN 376
Query: 243 ILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEIL 302
+LA AQQ IAIQ L S M+ + ET V+ LT+ ++ D L DDEEY++IL
Sbjct: 377 VLAHAQQQIAIQ--VLVYSWMSPV--------ETPTNVVALTQVVSPDELKDDEEYQDIL 426
Query: 303 EDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNT 362
EDM+EECGKYG LV +VIPRP ++G + PGVGKVF+EY D G A AK +L GR+FGG++
Sbjct: 427 EDMKEECGKYGNLVKLVIPRP-RDGEDVPGVGKVFVEYSDTAGAAKAKASLHGRRFGGHS 485
Query: 363 VNAFYYPEDKYFNKDY 378
V A YYP +K+ +DY
Sbjct: 486 VVAVYYPAEKFSIEDY 501
>gi|357156009|ref|XP_003577312.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 576
Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/381 (67%), Positives = 295/381 (77%), Gaps = 14/381 (3%)
Query: 1 MAQNMLPFGA-TQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM F A TQ + P Q MTQQATRHARRVYVGGLPP ANEQ +A +F+QVM A
Sbjct: 209 MLPNMFNFTAPTQFNPLAMQP-QAMTQQATRHARRVYVGGLPPTANEQTVAIYFNQVMAA 267
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP
Sbjct: 268 IGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNP 327
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAAALGP QP+PNLNL AVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 328 SLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 387
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + E
Sbjct: 388 RGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPE 447
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE+IL QA Q + +Q++ LQ +GG + KV+CLT+ ++AD L DDEEYE
Sbjct: 448 QETILMQAHQQVQMQRLVLQ------VGGALP------TKVVCLTQVVSADELRDDEEYE 495
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+ILEDMREE KYG LV VIPRPD +G PGVGKVFLEY D G AK + GRKFG
Sbjct: 496 DILEDMREEGRKYGNLVKAVIPRPDPSGAPVPGVGKVFLEYLDVDGSTKAKTGMHGRKFG 555
Query: 360 GNTVNAFYYPEDKYFNKDYSA 380
GN V A +YPE+K+ DY A
Sbjct: 556 GNQVVAVFYPENKFAEGDYDA 576
>gi|15234495|ref|NP_195387.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|75318082|sp|O23212.2|U2A2A_ARATH RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|18087531|gb|AAL58899.1|AF462805_1 At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|4006898|emb|CAB16828.1| splicing factor-like protein [Arabidopsis thaliana]
gi|7270617|emb|CAB80335.1| splicing factor-like protein [Arabidopsis thaliana]
gi|23506119|gb|AAN28919.1| At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|24030414|gb|AAN41365.1| putative splicing factor [Arabidopsis thaliana]
gi|332661287|gb|AEE86687.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 573
Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/381 (67%), Positives = 294/381 (77%), Gaps = 14/381 (3%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P Q G +MP+Q MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM A
Sbjct: 206 MFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAA 265
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
+GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAM+LDGIIFEG V+VRRP+DYNP
Sbjct: 266 VGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNP 325
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QPSP+LNLAAVGL GA GG EGPDR+FVGGLPYYFTE+Q++ELLESFG L
Sbjct: 326 SLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGL 385
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + K E
Sbjct: 386 KGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPE 445
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE++L AQQ IA Q++ LQ + T V+CLT+ +T D L DDEEY
Sbjct: 446 QENVLLHAQQQIAFQRVMLQPGAVATT-------------VVCLTQVVTEDELRDDEEYG 492
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR+E GK+G L NVVIPRP NG G+GKVFL+Y D G A+ ++GRKFG
Sbjct: 493 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 552
Query: 360 GNTVNAFYYPEDKYFNKDYSA 380
GN V A YYPEDK+ DY A
Sbjct: 553 GNEVVAVYYPEDKFEQGDYGA 573
>gi|334187224|ref|NP_001190937.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661290|gb|AEE86690.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 551
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/381 (67%), Positives = 294/381 (77%), Gaps = 14/381 (3%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P Q G +MP+Q MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM A
Sbjct: 184 MFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAA 243
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
+GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAM+LDGIIFEG V+VRRP+DYNP
Sbjct: 244 VGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNP 303
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QPSP+LNLAAVGL GA GG EGPDR+FVGGLPYYFTE+Q++ELLESFG L
Sbjct: 304 SLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGL 363
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + K E
Sbjct: 364 KGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPE 423
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE++L AQQ IA Q++ LQ + T V+CLT+ +T D L DDEEY
Sbjct: 424 QENVLLHAQQQIAFQRVMLQPGAVATT-------------VVCLTQVVTEDELRDDEEYG 470
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR+E GK+G L NVVIPRP NG G+GKVFL+Y D G A+ ++GRKFG
Sbjct: 471 DIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFG 530
Query: 360 GNTVNAFYYPEDKYFNKDYSA 380
GN V A YYPEDK+ DY A
Sbjct: 531 GNEVVAVYYPEDKFEQGDYGA 551
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/379 (69%), Positives = 298/379 (78%), Gaps = 15/379 (3%)
Query: 1 MAQNMLPFG-ATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NMLPFG A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A +F+QVM A
Sbjct: 179 MFPNMLPFGVAGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPSANEQTVAVYFNQVMAA 237
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP
Sbjct: 238 IGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNP 297
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAAALGP QPSPNLNLAAVGL +G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 298 SLAAALGPSQPSPNLNLAAVGLTAGSTGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 357
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + E
Sbjct: 358 RGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRANQGASQPRPE 417
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QESIL QAQQ + +QK+ Q + T KV+CLT+ +TAD L DDEEYE
Sbjct: 418 QESILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVTADELKDDEEYE 464
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR E GKYGTLV V+IPRPD +G GVGKVFLEY D G A AK AL GRKFG
Sbjct: 465 DIMEDMRLEAGKYGTLVKVIIPRPDPSGQPVAGVGKVFLEYADIDGAAKAKTALHGRKFG 524
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A Y EDK+ N +Y
Sbjct: 525 GNPVVAVCYAEDKFANGEY 543
>gi|122245120|sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|68036764|gb|AAY84880.1| U2AF large subunit [Triticum aestivum]
Length = 543
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/380 (68%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NMLPF Q+ + P Q MTQQATRHARRVYVGGLPP ANEQ++A +F+QVM AI
Sbjct: 176 MFPNMLPFADGQINPLVMQP-QAMTQQATRHARRVYVGGLPPSANEQSVAIYFNQVMAAI 234
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+
Sbjct: 235 GGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPS 294
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAAALGP QPS NLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 295 LAAALGPSQPSSNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLR 354
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA S Q + EQ
Sbjct: 355 GFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQPRPEQ 414
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
E+IL QAQQ + +QK+ Q + T KV+CLT+ +TAD L DDEEYE+
Sbjct: 415 ENILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVTADELKDDEEYED 461
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I+EDMR E GKYG LV VVIPRP +G GVGKVFLEY D G AK A+ GRKFGG
Sbjct: 462 IMEDMRLEAGKYGNLVKVVIPRPHPSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGG 521
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V A +YPE+K+ ++DY A
Sbjct: 522 NPVVAVFYPENKFADEDYDA 541
>gi|168056046|ref|XP_001780033.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668531|gb|EDQ55136.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 536
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/381 (68%), Positives = 297/381 (77%), Gaps = 19/381 (4%)
Query: 4 NMLPFGATQLGAFPLMPVQVMTQQ-ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG 62
+M PFG Q G P MP Q MTQQ ATRHARRVYVGGLPP+ANEQ IAT+FSQVM A+GG
Sbjct: 167 SMFPFGGAQFGGLPGMPAQAMTQQQATRHARRVYVGGLPPMANEQTIATYFSQVMAAVGG 226
Query: 63 NSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA 122
N+AGPGDAVVNVYIN EKKFAFVEMRTVEEASNAM+LDGIIFEGV+VRVRRP+DYNP++A
Sbjct: 227 NTAGPGDAVVNVYINQEKKFAFVEMRTVEEASNAMSLDGIIFEGVSVRVRRPSDYNPSMA 286
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
A LGP QPSP+LNLAAVGL GA GGA+GPDR+FVGGLPYY TE QIKELLESFG L GF
Sbjct: 287 ATLGPSQPSPHLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEPQIKELLESFGPLRGF 346
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAV-TDIACAALNGLKMGDKTLTVRRATASS--GQSKTE 239
DLVKDRDTGNSKGYGFCVYQDP+V TD+A AALNGLKMGDKTL+VRRA+A GQ K +
Sbjct: 347 DLVKDRDTGNSKGYGFCVYQDPSVTTDVAIAALNGLKMGDKTLSVRRASARYGIGQPKPD 406
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCL-TEAITADALADDEEY 298
Q ++L AQQ IA+Q + L+ M L +T + +T + L DDEEY
Sbjct: 407 QANVLIHAQQQIALQ-VTLK----------MLLHRKTFTAAWTFYAQVVTPNQLEDDEEY 455
Query: 299 EEILEDMREECGKYGTLVNVVIPRPDQNGGET-PGVGKVFLEYYDAVGCATAKNALSGRK 357
+EILEDMR ECGKYG L+NVVIPRP GET PG+GKVFL+Y D G AK +L GR+
Sbjct: 456 QEILEDMRMECGKYGNLLNVVIPRP--RAGETVPGLGKVFLDYSDTTGATKAKTSLHGRR 513
Query: 358 FGGNTVNAFYYPEDKYFNKDY 378
F N V A +YPEDK+ KD+
Sbjct: 514 FDENLVVAVFYPEDKFAAKDF 534
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/380 (68%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NMLP G Q + P Q MTQQATRHARRVYVGGLPP ANEQ++A +F+QVM AI
Sbjct: 183 MFPNMLPMGVGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAI 241
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+
Sbjct: 242 GGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPS 301
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAAALGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 302 LAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLR 361
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQ
Sbjct: 362 GFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQ 421
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ESIL QAQQ + +QK+ Q + T KV+CLT+ ++AD L DDEEYE+
Sbjct: 422 ESILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVSADELKDDEEYED 468
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I+EDMR E GKYG L+ VVIPRPD +G GVGKVFLEY D G AK A+ GRKFGG
Sbjct: 469 IMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGG 528
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V A +YPE+K+ + +Y A
Sbjct: 529 NPVVAVFYPENKFSSAEYDA 548
>gi|115486631|ref|NP_001068459.1| Os11g0682300 [Oryza sativa Japonica Group]
gi|113645681|dbj|BAF28822.1| Os11g0682300, partial [Oryza sativa Japonica Group]
Length = 378
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/380 (68%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NMLP G Q + P Q MTQQATRHARRVYVGGLPP ANEQ++A +F+QVM AI
Sbjct: 13 MFPNMLPMGVGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAI 71
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+
Sbjct: 72 GGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPS 131
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAAALGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 132 LAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLR 191
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQ
Sbjct: 192 GFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQ 251
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ESIL QAQQ + +QK+ Q + T KV+CLT+ ++AD L DDEEYE+
Sbjct: 252 ESILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVSADELKDDEEYED 298
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I+EDMR E GKYG L+ VVIPRPD +G GVGKVFLEY D G AK A+ GRKFGG
Sbjct: 299 IMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGG 358
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V A +YPE+K+ + +Y A
Sbjct: 359 NPVVAVFYPENKFSSAEYDA 378
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/380 (68%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NMLP G Q + P Q MTQQATRHARRVYVGGLPP ANEQ++A +F+QVM AI
Sbjct: 183 MFPNMLPMGVGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAI 241
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+
Sbjct: 242 GGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPS 301
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAAALGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 302 LAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLR 361
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQ
Sbjct: 362 GFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQ 421
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ESIL QAQQ + +QK+ Q + T KV+CLT+ ++AD L DDEEYE+
Sbjct: 422 ESILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVSADELKDDEEYED 468
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I+EDMR E GKYG L+ VVIPRPD +G GVGKVFLEY D G AK A+ GRKFGG
Sbjct: 469 IMEDMRLESGKYGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGG 528
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V A +YPE+K+ + +Y A
Sbjct: 529 NPVVAVFYPENKFASAEYDA 548
>gi|108864648|gb|ABG22574.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 366
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/380 (68%), Positives = 297/380 (78%), Gaps = 14/380 (3%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NMLP G Q + P Q MTQQATRHARRVYVGGLPP ANEQ++A +F+QVM AI
Sbjct: 1 MFPNMLPMGVGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAI 59
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
GGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+
Sbjct: 60 GGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPS 119
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
LAAALGP QPSPNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 120 LAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLR 179
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQ
Sbjct: 180 GFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQ 239
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
ESIL QAQQ + +QK+ Q + T KV+CLT+ ++AD L DDEEYE+
Sbjct: 240 ESILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVSADELKDDEEYED 286
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I+EDMR E GKYG L+ VVIPRPD +G GVGKVFLEY D G AK A+ GRKFGG
Sbjct: 287 IMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGG 346
Query: 361 NTVNAFYYPEDKYFNKDYSA 380
N V A +YPE+K+ + +Y A
Sbjct: 347 NPVVAVFYPENKFSSAEYDA 366
>gi|212723502|ref|NP_001131562.1| uncharacterized protein LOC100192903 [Zea mays]
gi|194691860|gb|ACF80014.1| unknown [Zea mays]
gi|195646366|gb|ACG42651.1| splicing factor U2AF 65 kDa subunit [Zea mays]
gi|413920213|gb|AFW60145.1| Splicing factor U2AF subunit [Zea mays]
Length = 539
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/379 (69%), Positives = 297/379 (78%), Gaps = 15/379 (3%)
Query: 1 MAQNMLPFG-ATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NMLPFG A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A +F+QVM A
Sbjct: 173 MFPNMLPFGVAGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAA 231
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP
Sbjct: 232 IGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNP 291
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAAALGP QPSPNLNLAAVGL +G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 292 SLAAALGPSQPSPNLNLAAVGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 351
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + E
Sbjct: 352 RGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRANQGASQPRPE 411
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QESIL QAQQ + +QK+ Q + T KV+CLT+ +TAD L DDEEYE
Sbjct: 412 QESILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVTADELKDDEEYE 458
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR E GKYG LV V+IPRPD +G GVGKVFLEY D G A AK AL GRKFG
Sbjct: 459 DIMEDMRLEAGKYGNLVKVIIPRPDPSGQPVVGVGKVFLEYADIDGAAKAKTALHGRKFG 518
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A Y EDK+ N +Y
Sbjct: 519 GNPVVAVCYAEDKFANGEY 537
>gi|413920211|gb|AFW60143.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 367
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/379 (69%), Positives = 297/379 (78%), Gaps = 15/379 (3%)
Query: 1 MAQNMLPFG-ATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NMLPFG A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A +F+QVM A
Sbjct: 1 MFPNMLPFGVAGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAA 59
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP
Sbjct: 60 IGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNP 119
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAAALGP QPSPNLNLAAVGL +G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 120 SLAAALGPSQPSPNLNLAAVGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 179
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + E
Sbjct: 180 RGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRANQGASQPRPE 239
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QESIL QAQQ + +QK+ Q + T KV+CLT+ +TAD L DDEEYE
Sbjct: 240 QESILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVTADELKDDEEYE 286
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR E GKYG LV V+IPRPD +G GVGKVFLEY D G A AK AL GRKFG
Sbjct: 287 DIMEDMRLEAGKYGNLVKVIIPRPDPSGQPVVGVGKVFLEYADIDGAAKAKTALHGRKFG 346
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A Y EDK+ N +Y
Sbjct: 347 GNPVVAVCYAEDKFANGEY 365
>gi|193848546|gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
Length = 569
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/385 (67%), Positives = 298/385 (77%), Gaps = 19/385 (4%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQ-----ATRHARRVYVGGLPPLANEQAIATFFSQ 55
M NMLPF Q + P Q MTQQ ATRHARRVYVGGLPP ANEQ++A +F+Q
Sbjct: 199 MFPNMLPFAVGQFNPLVMQP-QAMTQQHIFPQATRHARRVYVGGLPPTANEQSVAIYFNQ 257
Query: 56 VMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPT 115
VM AIGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPT
Sbjct: 258 VMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPT 317
Query: 116 DYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLES 175
DYNP+LA+ALGP QPS NLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLES
Sbjct: 318 DYNPSLASALGPSQPSSNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLES 377
Query: 176 FGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQ 235
FG+L GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA S Q
Sbjct: 378 FGSLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQ 437
Query: 236 SKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADD 295
+ EQE+IL QAQQ + +QK+ Q + T KV+CLT+ +TAD L DD
Sbjct: 438 PRPEQENILLQAQQQVQLQKLVYQVGALPT-------------KVICLTQVVTADELKDD 484
Query: 296 EEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSG 355
EEYE+I+EDMR E GKYGTLV VVIPRP +G GVGKVFLEY D G AK A+ G
Sbjct: 485 EEYEDIMEDMRLEAGKYGTLVKVVIPRPHPSGEPVAGVGKVFLEYADVDGSTKAKTAMHG 544
Query: 356 RKFGGNTVNAFYYPEDKYFNKDYSA 380
RKFGGN V A +YPE+K+ ++++ A
Sbjct: 545 RKFGGNPVVAVFYPENKFSDEEFDA 569
>gi|115486373|ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|108864607|gb|ABA94914.2| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|222616290|gb|EEE52422.1| hypothetical protein OsJ_34542 [Oryza sativa Japonica Group]
Length = 574
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/377 (65%), Positives = 285/377 (75%), Gaps = 14/377 (3%)
Query: 5 MLP--FGATQLGAFPL-MPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
MLP F TQ PL + Q MTQQATRHARRVYVGGLPP ANE +A +F+QVM A+G
Sbjct: 207 MLPNMFNLTQTPFTPLVIQPQAMTQQATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVG 266
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTL 121
GN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+L
Sbjct: 267 GNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSL 326
Query: 122 AAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHG 181
AAALGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L G
Sbjct: 327 AAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG 386
Query: 182 FDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQE 241
FDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQE
Sbjct: 387 FDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQE 446
Query: 242 SILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEI 301
S+L QQ +QK+ Q G G KV+CLT+ ++ D L DDEEYE+I
Sbjct: 447 SMLLHVQQQAQMQKLMFQVGG-----------GALPTKVVCLTQVVSPDELRDDEEYEDI 495
Query: 302 LEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
++DMREE +YG LV VVIPRPD +G GVG+VFLE+ D AKN + GRKF N
Sbjct: 496 VQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFLEFADVESSTKAKNGMHGRKFANN 555
Query: 362 TVNAFYYPEDKYFNKDY 378
V A +YPEDK+ Y
Sbjct: 556 QVVAVFYPEDKFAEGQY 572
>gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
Length = 574
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/377 (65%), Positives = 285/377 (75%), Gaps = 14/377 (3%)
Query: 5 MLP--FGATQLGAFPL-MPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
MLP F TQ PL + Q MTQQATRHARRVYVGGLPP ANE +A +F+QVM A+G
Sbjct: 207 MLPNMFNLTQTPFTPLVIQPQAMTQQATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVG 266
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTL 121
GN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+L
Sbjct: 267 GNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSL 326
Query: 122 AAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHG 181
AAALGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L G
Sbjct: 327 AAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG 386
Query: 182 FDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQE 241
FDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQE
Sbjct: 387 FDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQE 446
Query: 242 SILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEI 301
S+L QQ +QK+ Q G G KV+CLT+ I+ D L DDEEYE+I
Sbjct: 447 SMLLHVQQQAQMQKLMFQVGG-----------GALPTKVVCLTQVISPDELRDDEEYEDI 495
Query: 302 LEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
++DMREE +YG LV VVIPRPD +G GVG+VFLE+ D AKN + GRKF N
Sbjct: 496 VQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFLEFADIESSTKAKNGMHGRKFANN 555
Query: 362 TVNAFYYPEDKYFNKDY 378
V A +YPEDK+ Y
Sbjct: 556 QVVAVFYPEDKFAEGQY 572
>gi|168030966|ref|XP_001767993.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680835|gb|EDQ67268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/378 (65%), Positives = 292/378 (77%), Gaps = 20/378 (5%)
Query: 4 NMLPF-GATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG 62
++ PF G TQ+G FPL + TRHARRVYVGGLPP+ANEQ++ATFFSQVM A+GG
Sbjct: 137 SIFPFAGGTQVGPFPLH-FHAIGLSFTRHARRVYVGGLPPMANEQSVATFFSQVMAAVGG 195
Query: 63 NSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA 122
N+AGPGDAVVNVYIN EK+FAFVEMRTVEEASNAMALDGI++EGV+VRVRRP+DYNP++A
Sbjct: 196 NTAGPGDAVVNVYINQEKRFAFVEMRTVEEASNAMALDGIVYEGVSVRVRRPSDYNPSMA 255
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
A LGP QPS +LNL AVGL GA+GGA+GPDR+FVGGLPYY +E QI +LL SFG L F
Sbjct: 256 ATLGPSQPSSHLNLTAVGLTPGALGGADGPDRIFVGGLPYYLSEEQIMDLLSSFGHLRAF 315
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA--SSGQSKTEQ 240
DLVKDRDTGNSKGYGFCVYQDP+V DIACAALNGLKMGD+TLTVRRA+A GQ K +Q
Sbjct: 316 DLVKDRDTGNSKGYGFCVYQDPSVMDIACAALNGLKMGDRTLTVRRASARLRFGQPKPDQ 375
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
+I+ QAQQ IA+Q A ET KV+CL++ ++ L DD E++E
Sbjct: 376 SNIIVQAQQQIALQVAA----------------PETATKVICLSQVVSIVDLKDDVEFDE 419
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
I+EDM+EECGKYG+L+NVVIPRP + + PG+G VF+EY D G A AK AL RKFGG
Sbjct: 420 IVEDMKEECGKYGSLLNVVIPRPSYDEEDVPGIGMVFVEYSDLEGAAKAKQALHNRKFGG 479
Query: 361 NTVNAFYYPEDKYFNKDY 378
V A YY EDK+ N DY
Sbjct: 480 KLVIASYYSEDKFLNGDY 497
>gi|223950169|gb|ACN29168.1| unknown [Zea mays]
gi|413920349|gb|AFW60281.1| splicing factor U2AF subunit [Zea mays]
Length = 594
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/375 (67%), Positives = 289/375 (77%), Gaps = 13/375 (3%)
Query: 4 NMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
N+ A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A FF+ VM AIGGN
Sbjct: 232 NLYNLAAGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGN 290
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAA
Sbjct: 291 TAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAA 350
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
ALGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L GFD
Sbjct: 351 ALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFD 410
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQESI
Sbjct: 411 LVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESI 470
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
L QAQQ + +QK+ Q +GG + KV+CLT+ +TAD L DDEEY +I+E
Sbjct: 471 LLQAQQQVQMQKLVYQ------VGGALP------TKVVCLTQVVTADELRDDEEYNDIVE 518
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
DMREE KYG LV VVIPRPD + GVGKVFLEY D G AK + GRKFGGN V
Sbjct: 519 DMREEGRKYGNLVKVVIPRPDPSDAPVAGVGKVFLEYADVEGSTKAKTGMHGRKFGGNQV 578
Query: 364 NAFYYPEDKYFNKDY 378
A +YPEDK+ + Y
Sbjct: 579 VAVFYPEDKFAAEQY 593
>gi|413920210|gb|AFW60142.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 364
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/358 (70%), Positives = 286/358 (79%), Gaps = 13/358 (3%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK 81
Q MTQQATRHARRVYVGGLPP ANEQ +A +F+QVM AIGGN+AGPGDAV+NVYINH+KK
Sbjct: 19 QAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKK 78
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
FAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAAALGP QPSPNLNLAAVGL
Sbjct: 79 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGL 138
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
+G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L GFDLVKDR+TGNSKGY FCVY
Sbjct: 139 TAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 198
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
QD VTDIACAALNG+KMGDKTLTVRRA + Q + EQESIL QAQQ + +QK+ Q
Sbjct: 199 QDLTVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQLQKLVYQVG 258
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
+ T KV+CLT+ +TAD L DDEEYE+I+EDMR E GKYG LV V+IP
Sbjct: 259 ALPT-------------KVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVIIP 305
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
RPD +G GVGKVFLEY D G A AK AL GRKFGGN V A Y EDK+ N +Y
Sbjct: 306 RPDPSGQPVVGVGKVFLEYADIDGAAKAKTALHGRKFGGNPVVAVCYAEDKFANGEYD 363
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/383 (65%), Positives = 288/383 (75%), Gaps = 33/383 (8%)
Query: 1 MAQNMLPFGATQL---GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVM 57
M NM P Q+ A P++PVQ MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM
Sbjct: 255 MFPNMFPLPTNQVQPFSALPVLPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVM 314
Query: 58 TAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY 117
IGGN+AGPGDAV MR+VEEASNAMALDGIIFEG V+VRRPTDY
Sbjct: 315 ATIGGNTAGPGDAV---------------MRSVEEASNAMALDGIIFEGAPVKVRRPTDY 359
Query: 118 NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFG 177
NP+LAAALGP QP+PNLNL VGL+ G+ GG +GPDR+FVGG+PYYFTETQI+ELLE+FG
Sbjct: 360 NPSLAAALGPSQPNPNLNLGLVGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFG 419
Query: 178 TLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSG--Q 235
L GFDLVKDR+TGNSKGY FCVYQD AVTDIACAALNG+KMGDKTLTVRRA ++ Q
Sbjct: 420 PLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQ 479
Query: 236 SKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADD 295
K EQESIL AQQ IA+QK+ LQ + + T KVLCLT A++ D L DD
Sbjct: 480 PKPEQESILMHAQQQIALQKLMLQPALVAT-------------KVLCLTHAVSPDELKDD 526
Query: 296 EEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSG 355
E+YEEIL+DMR+EC K+G LVNVVIPRP +G PGVGKVFLEY D G A++ L+G
Sbjct: 527 EDYEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARSGLNG 586
Query: 356 RKFGGNTVNAFYYPEDKYFNKDY 378
RKFGGN V A +YPE+K+ DY
Sbjct: 587 RKFGGNQVIAVFYPENKFAQGDY 609
>gi|413920214|gb|AFW60146.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 536
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/379 (68%), Positives = 294/379 (77%), Gaps = 18/379 (4%)
Query: 1 MAQNMLPFG-ATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NMLPFG A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A +F+QVM A
Sbjct: 173 MFPNMLPFGVAGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAA 231
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP
Sbjct: 232 IGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNP 291
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAAALGP QPSPNLNLAAVGL +G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 292 SLAAALGPSQPSPNLNLAAVGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 351
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + E
Sbjct: 352 RGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRANQGASQPRPE 411
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QESIL QAQQ + +QK+ Q + T KV+CLT+ +TAD L DDEEYE
Sbjct: 412 QESILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVTADELKDDEEYE 458
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I+EDMR E G LV V+IPRPD +G GVGKVFLEY D G A AK AL GRKFG
Sbjct: 459 DIMEDMRLEA---GNLVKVIIPRPDPSGQPVVGVGKVFLEYADIDGAAKAKTALHGRKFG 515
Query: 360 GNTVNAFYYPEDKYFNKDY 378
GN V A Y EDK+ N +Y
Sbjct: 516 GNPVVAVCYAEDKFANGEY 534
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/375 (67%), Positives = 288/375 (76%), Gaps = 13/375 (3%)
Query: 4 NMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
N+ A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A FF+ VM AIGGN
Sbjct: 234 NLYNLAAGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGN 292
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAA
Sbjct: 293 TAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAA 352
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
ALGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L GFD
Sbjct: 353 ALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFD 412
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTV RA + Q + EQESI
Sbjct: 413 LVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVSRANQGASQPRPEQESI 472
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
L QAQQ + +QK+ Q +GG + KV+CLT+ +TAD L DDEEY +I+E
Sbjct: 473 LLQAQQQVQMQKLVYQ------VGGALP------TKVVCLTQVVTADELRDDEEYNDIVE 520
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
DMREE KYG LV VVIPRPD + GVGKVFLEY D G AK + GRKFGGN V
Sbjct: 521 DMREEGRKYGNLVKVVIPRPDPSDAPVAGVGKVFLEYADVEGSTKAKTGMHGRKFGGNQV 580
Query: 364 NAFYYPEDKYFNKDY 378
A +YPEDK+ + Y
Sbjct: 581 VAVFYPEDKFAAEQY 595
>gi|414591747|tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 590
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/375 (66%), Positives = 286/375 (76%), Gaps = 13/375 (3%)
Query: 4 NMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
N+ A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A FF+ VM AIGGN
Sbjct: 228 NLYNLAAGQFNPLAIQP-QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGN 286
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAM LDGI+FEG V++RRPTDYNP+LAA
Sbjct: 287 TAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAA 346
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
ALGP QP+PNLNL+AVGL G+ GG EGPDR+FVGGL YYFTE Q++ELLESFG L GFD
Sbjct: 347 ALGPSQPNPNLNLSAVGLTPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFD 406
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQESI
Sbjct: 407 LVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESI 466
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
L QAQQ + +QK Q +GG + KV+CLT+ +T D L DDEEY++I+E
Sbjct: 467 LLQAQQQVQMQKFVYQ------VGGALP------TKVVCLTQVVTEDELRDDEEYDDIVE 514
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
DMREE KYG LV V IPRPD +G GVGKVFLEY D G AK + GRKFGGN V
Sbjct: 515 DMREEGHKYGNLVKVAIPRPDPSGAPVAGVGKVFLEYADVEGSTKAKTGMHGRKFGGNQV 574
Query: 364 NAFYYPEDKYFNKDY 378
A +YPEDK+ + Y
Sbjct: 575 VAVFYPEDKFAAEQY 589
>gi|156070782|gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]
Length = 506
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/373 (65%), Positives = 288/373 (77%), Gaps = 18/373 (4%)
Query: 9 GATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPG 68
G Q G FP+MP+Q MTQQATRHARRVYVGGLP ANEQ++ATFFS VM AIGGN+AGPG
Sbjct: 150 GFFQCGPFPVMPIQEMTQQATRHARRVYVGGLPSSANEQSVATFFSHVMYAIGGNTAGPG 209
Query: 69 DAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG 128
DAV++VYINHEKKFAFVEMR+VEEASNAMALDG+IFEG VRVRRP+DYN +LAA LGP
Sbjct: 210 DAVIDVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGEPVRVRRPSDYNASLAATLGPS 269
Query: 129 QPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDR 188
QPSPNLNLAAVGL G+ GG EGPD +F+GGLP YFTE QI+ELLESFG L GF+LVKDR
Sbjct: 270 QPSPNLNLAAVGLTPGSSGGLEGPDCIFIGGLPDYFTEAQIRELLESFGPLRGFNLVKDR 329
Query: 189 DTGNSKGYGFCVYQDPAVTDIACAALNGLK-MGDKTLTVRRATASSGQSKTEQESILAQA 247
++GNSKG+ F VYQD +VT+IAC ALNG+K M DKTL VRRA + Q EQES+L
Sbjct: 330 ESGNSKGHAFFVYQDVSVTEIACGALNGIKIMHDKTLIVRRANQGTQQLNPEQESVL--- 386
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
Q I++Q++ L L G KVLCLTEA+ D L DD++Y++ILEDMR
Sbjct: 387 -QQISLQRLML-------------LPGALATKVLCLTEAVRLDELNDDDDYQDILEDMRT 432
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
ECGK+G L+NV+IPRP+ NG TPGVGKVFLEY D + A+ L+GRKFGGN V A +
Sbjct: 433 ECGKFGALLNVIIPRPNPNGEPTPGVGKVFLEYADVDSSSKAQQGLNGRKFGGNQVIAVF 492
Query: 368 YPEDKYFNKDYSA 380
YPE+K+ +Y A
Sbjct: 493 YPENKFSEGNYEA 505
>gi|226532558|ref|NP_001140768.1| uncharacterized protein LOC100272843 [Zea mays]
gi|194701008|gb|ACF84588.1| unknown [Zea mays]
gi|414591744|tpg|DAA42315.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 583
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/357 (68%), Positives = 280/357 (78%), Gaps = 12/357 (3%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK 81
Q MTQQATRHARRVYVGGLPP ANEQ +A FF+ VM AIGGN+AGPGDAV+NVYINH+KK
Sbjct: 238 QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKK 297
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
FAFVEMR+VEEASNAM LDGI+FEG V++RRPTDYNP+LAAALGP QP+PNLNL+AVGL
Sbjct: 298 FAFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVGL 357
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
G+ GG EGPDR+FVGGL YYFTE Q++ELLESFG L GFDLVKDR+TGNSKGY FCVY
Sbjct: 358 TPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 417
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
QD VTDIACAALNG+KMGDKTLTVRRA + Q + EQESIL QAQQ + +QK Q
Sbjct: 418 QDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKFVYQ-- 475
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
+GG + KV+CLT+ +T D L DDEEY++I+EDMREE KYG LV V IP
Sbjct: 476 ----VGGALP------TKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYGNLVKVAIP 525
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
RPD +G GVGKVFLEY D G AK + GRKFGGN V A +YPEDK+ + Y
Sbjct: 526 RPDPSGAPVAGVGKVFLEYADVEGSTKAKTGMHGRKFGGNQVVAVFYPEDKFAAEQY 582
>gi|224077136|ref|XP_002305148.1| predicted protein [Populus trichocarpa]
gi|222848112|gb|EEE85659.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/296 (81%), Positives = 256/296 (86%), Gaps = 2/296 (0%)
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP+LAA LGP QPSP LNLAAVGL G I
Sbjct: 1 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPSLAATLGPSQPSPLLNLAAVGLVPGTI 60
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GAEGPDRVFVGGLPYYFTE QI+ELLESFG L GFDLVKDRDTGNSKGYGFCVYQDPAV
Sbjct: 61 SGAEGPDRVFVGGLPYYFTEIQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAV 120
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
TDIACAALNGLKMGDKTLTVRRAT S GQSK+EQE+ILAQAQQHIAIQKMALQ MN
Sbjct: 121 TDIACAALNGLKMGDKTLTVRRATESGGQSKSEQENILAQAQQHIAIQKMALQAGVMNLP 180
Query: 267 GGGMSL--FGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPD 324
G G+ L T +KVLCLTEAIT + LADDEEYEEILEDMREEC K+GTL+NVVIPRP
Sbjct: 181 GVGIPLAESAYTPSKVLCLTEAITMEVLADDEEYEEILEDMREECCKFGTLINVVIPRPS 240
Query: 325 QNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYSA 380
QN + PG GKVFLEY D + CA A+NAL+GRKFGGNTVNAFYYPE+KY N DY A
Sbjct: 241 QNEEKMPGAGKVFLEYSDTISCANARNALNGRKFGGNTVNAFYYPEEKYSNGDYGA 296
>gi|296088196|emb|CBI35712.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/288 (83%), Positives = 254/288 (88%), Gaps = 3/288 (1%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M QNM PFGATQLGA PLMPVQ MTQQATRHARRVYVGGLPPLANEQ IATFFSQVMTAI
Sbjct: 117 MIQNMFPFGATQLGALPLMPVQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMTAI 176
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRV-RRPTDYNP 119
GGNSAGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGI+FE + PTDYNP
Sbjct: 177 GGNSAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIMFEACLTLIFSLPTDYNP 236
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAAALGP QPSP+LNLAAVGL G IGGAEGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 237 SLAAALGPSQPSPHLNLAAVGLMPGVIGGAEGPDRIFVGGLPYYFTEEQIRELLESFGPL 296
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT SGQ+K+E
Sbjct: 297 RGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATVGSGQAKSE 356
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSL--FGETLAKVLCLTE 285
Q++ILAQAQQHIAIQK+ALQ G+N G GM+ ET KVLCLTE
Sbjct: 357 QDNILAQAQQHIAIQKIALQAGGLNLPGAGMAFTAIAETPTKVLCLTE 404
>gi|357446501|ref|XP_003593528.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355482576|gb|AES63779.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 593
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/447 (56%), Positives = 303/447 (67%), Gaps = 74/447 (16%)
Query: 3 QNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG 62
QN P+G +Q+GA LM VQ MTQQATRHARRVYVGGLPP ANEQ+IA+FFSQVM AIGG
Sbjct: 148 QNFSPYGISQIGALSLMQVQPMTQQATRHARRVYVGGLPPFANEQSIASFFSQVMIAIGG 207
Query: 63 NSAGPGDA-----------------------------------------VVNVYINHEKK 81
NSAG GD+ +V + N +
Sbjct: 208 NSAGSGDSVVNVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGIGVAPIVKMVENRLRW 267
Query: 82 FAFVEMRTVEEASNAM-------------------ALD-----------GIIFEGVAVRV 111
F VE R ++ + + LD +I GVAVRV
Sbjct: 268 FGHVERRPIDSVARRVDQMEDSQMDKTIRKDLEINKLDRNMVYDRTLWRNLIHVGVAVRV 327
Query: 112 RRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKE 171
RRPTDYNP+LAA LGP QPS NLNL+AVGL++G IGGAEG DR+FVGGLPYYFTE Q++E
Sbjct: 328 RRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAGTIGGAEGLDRIFVGGLPYYFTEVQMRE 387
Query: 172 LLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
LL++FG L FD+V+D++TGNSKGYGFC+YQDPAVTDIACAALNGLKMGDKTLTVRRAT
Sbjct: 388 LLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAVTDIACAALNGLKMGDKTLTVRRATV 447
Query: 232 SSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADA 291
S+ SK E+++I A+AQQHIA+QK+AL+ G+N G+ E+ KVLCLTEA+T +
Sbjct: 448 SA-HSKPEEDNIFARAQQHIAMQKIALEVVGLNI--PGVPTNDESPTKVLCLTEAVTTEQ 504
Query: 292 LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKN 351
L D+ EYEEILEDMR+EC K+GTLVNVVIPRP+ NG + G+GKVFLEY D C AKN
Sbjct: 505 LTDNGEYEEILEDMRDECRKFGTLVNVVIPRPNPNGELSTGIGKVFLEYSDCTACLAAKN 564
Query: 352 ALSGRKFGGNTVNAFYYPEDKYFNKDY 378
AL+GRKFGG+ V AFYYPE+KY + DY
Sbjct: 565 ALNGRKFGGSIVTAFYYPEEKYHSMDY 591
>gi|9858779|gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
Length = 532
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/356 (66%), Positives = 271/356 (76%), Gaps = 28/356 (7%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATF--FSQVMTAIGGNSAGPGDAVVNVYINHEKKFAF 84
QATRHARRVYVGGLPP ANEQ + FS GDAVVNVYINHEKKFAF
Sbjct: 203 QATRHARRVYVGGLPPTANEQVLKILLKFS-------------GDAVVNVYINHEKKFAF 249
Query: 85 VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASG 144
VEMR+VEEASNAMALDG+IFEG V+VRRP+DYNP+LAA LGP QPSPNLNLAAVGL G
Sbjct: 250 VEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPG 309
Query: 145 AIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDP 204
+ GG EGPDR+FVGGLPYYFTE+QI+ELLESFG L GFDLVKDR+TGNSKGY FCVYQD
Sbjct: 310 SSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDV 369
Query: 205 AVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMN 264
+VTDIACAALNG+KMGDKTLTVRRA + Q EQES+L AQQ IA+Q+ LQ +
Sbjct: 370 SVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALA 429
Query: 265 TLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPD 324
T KVLCLTE ++ D L DD++Y++ILEDMR ECGK+G L+NVVIPRP+
Sbjct: 430 T-------------KVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPN 476
Query: 325 QNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYSA 380
NG TPG+GKVFLEY D + A+ L+GRKFGGN V A +YPE+K+ DY A
Sbjct: 477 PNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYEA 532
>gi|224125466|ref|XP_002329812.1| predicted protein [Populus trichocarpa]
gi|222870874|gb|EEF08005.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/294 (79%), Positives = 249/294 (84%), Gaps = 2/294 (0%)
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
MRTVEEASNAM LDGIIFEGVAVRVRRPTDYNP+LAA LGP QPSP LNLAAVGL G I
Sbjct: 1 MRTVEEASNAMTLDGIIFEGVAVRVRRPTDYNPSLAATLGPSQPSPLLNLAAVGLVPGTI 60
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GAEGPDRVFVGGLPYYFTETQI+ELLESFG L GFDLVKDRDTGNSKGYGFCVYQDPAV
Sbjct: 61 SGAEGPDRVFVGGLPYYFTETQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAV 120
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
TDIACAALNGLKMGDKTLTVRR T S GQS++EQE+ILAQAQQHIAIQKMALQ MN
Sbjct: 121 TDIACAALNGLKMGDKTLTVRRGTESGGQSRSEQENILAQAQQHIAIQKMALQAGVMNLP 180
Query: 267 GGGMSL--FGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPD 324
G G+ L + +KVLCLTEAI + LADDEEYEEILEDMREEC K+GTL+NVVIPRP
Sbjct: 181 GVGIPLAESSHSPSKVLCLTEAIAMEVLADDEEYEEILEDMREECCKFGTLINVVIPRPS 240
Query: 325 QNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
Q + G GKVFLEY D CA A+NAL+GRKFGGNTVNA YYPEDKY N DY
Sbjct: 241 QTEEQISGAGKVFLEYSDTSSCANARNALNGRKFGGNTVNASYYPEDKYHNGDY 294
>gi|357160098|ref|XP_003578657.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 534
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/358 (63%), Positives = 274/358 (76%), Gaps = 12/358 (3%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK 81
Q MTQQATRHARRVYVGGLPP ANEQ +A +F+ VM AIGGN+AG GDAVVNVYINH+KK
Sbjct: 188 QAMTQQATRHARRVYVGGLPPSANEQTVAIYFNHVMAAIGGNAAGLGDAVVNVYINHDKK 247
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
FAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+ AA LGP QP+PNLNLAAVGL
Sbjct: 248 FAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSQAAVLGPSQPNPNLNLAAVGL 307
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
G+ GG EGPDR+FVGGLPYYFTE Q++ELLE+FG L GFD+VKDR+TGNSKGY FCVY
Sbjct: 308 TPGSAGGLEGPDRIFVGGLPYYFTEAQVQELLETFGPLRGFDIVKDRETGNSKGYAFCVY 367
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
QD AVTDIACAALNG+++GD+TLTVRRA + + + E E+IL QAQ ++K+ +
Sbjct: 368 QDLAVTDIACAALNGIQLGDRTLTVRRANQGAAEPRPEHENILLQAQHQAQMKKLVYE-- 425
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
+GG + KV+CLT+ ++ D L +DEEY++ILEDM E KYG LV VIP
Sbjct: 426 ----VGGAIP------TKVVCLTQVVSEDDLRNDEEYKDILEDMTFEGRKYGNLVQAVIP 475
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
RP NG GVGKVFLEY D G AK + GR+F G V+A +YPE K+ + +Y
Sbjct: 476 RPHPNGVPVAGVGKVFLEYADVDGSTNAKAGMHGRRFDGKVVDAVFYPEKKFADGEYD 533
>gi|302813365|ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
gi|300143770|gb|EFJ10458.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
Length = 353
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/367 (64%), Positives = 282/367 (76%), Gaps = 18/367 (4%)
Query: 13 LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVV 72
L AF MP Q MTQQATRHAR+VYVGGLP L NEQ IATFF+QVM +GGN+AGPGD VV
Sbjct: 4 LAAF-AMPPQTMTQQATRHARQVYVGGLPGLVNEQTIATFFNQVMVNVGGNTAGPGDVVV 62
Query: 73 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP 132
NVYIN EKKFAFVEMRTVEEASNAMALDGI F+GV+VRVRRP+DYNP++AA LGP QPSP
Sbjct: 63 NVYINQEKKFAFVEMRTVEEASNAMALDGISFQGVSVRVRRPSDYNPSVAANLGPSQPSP 122
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
+LNLAAVGL GA GG +GPDR+FVGGLPYY TE QI+ELLESFG L GFDLVKDR++GN
Sbjct: 123 SLNLAAVGLTPGAGGGVDGPDRIFVGGLPYYLTEPQIRELLESFGPLRGFDLVKDRESGN 182
Query: 193 SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIA 252
SKGYGFCVYQDP VTD+ACAALNGLKMGD+TLTVRRATA+ Q+ + IL+ A+
Sbjct: 183 SKGYGFCVYQDPNVTDVACAALNGLKMGDRTLTVRRATANGQQAGQDHAHILSLAK---- 238
Query: 253 IQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
+L +G+ E +VLCL EA+ L +DE+++EILEDMR+ECGK+
Sbjct: 239 ----SLTMNGV--------FPDEGATRVLCLKEAVLEAELIEDEQFDEILEDMRDECGKF 286
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
GT++++VIPRP Q E GVGKVF+ + D A+ +L+GRKF G V A YYPE++
Sbjct: 287 GTVLHLVIPRPSQ-AAEVDGVGKVFVHFEDTGAATRARISLNGRKFDGRAVVATYYPEEQ 345
Query: 373 YFNKDYS 379
+ D+S
Sbjct: 346 FMVGDFS 352
>gi|413920212|gb|AFW60144.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 502
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/344 (70%), Positives = 274/344 (79%), Gaps = 16/344 (4%)
Query: 1 MAQNMLPFG-ATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NMLPFG A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A +F+QVM A
Sbjct: 173 MFPNMLPFGVAGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAA 231
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP
Sbjct: 232 IGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNP 291
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAAALGP QPSPNLNLAAVGL +G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L
Sbjct: 292 SLAAALGPSQPSPNLNLAAVGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL 351
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + E
Sbjct: 352 RGFDLVKDRETGNSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRANQGASQPRPE 411
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QESIL QAQQ + +QK+ Q + T KV+CLT+ +TAD L DDEEYE
Sbjct: 412 QESILLQAQQQVQLQKLVYQVGALPT-------------KVVCLTQVVTADELKDDEEYE 458
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE-YYD 342
+I+EDMR E GKYG LV V+IPRPD +G GVGKV LE YYD
Sbjct: 459 DIMEDMRLEAGKYGNLVKVIIPRPDPSGQPVVGVGKVSLELYYD 502
>gi|302795921|ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
gi|300152483|gb|EFJ19125.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
Length = 360
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/367 (64%), Positives = 282/367 (76%), Gaps = 18/367 (4%)
Query: 13 LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVV 72
L AF MP Q MTQQATRHAR+VYVGGLP L NEQ IATFF+QVM +GGN+AGPGD VV
Sbjct: 11 LAAF-AMPPQTMTQQATRHARQVYVGGLPGLVNEQTIATFFNQVMVNVGGNTAGPGDVVV 69
Query: 73 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP 132
NVYIN EKKFAFVEMRTVEEASNAMALDGI F+GV+VRVRRP+DYNP++AA LGP QPSP
Sbjct: 70 NVYINQEKKFAFVEMRTVEEASNAMALDGISFQGVSVRVRRPSDYNPSVAANLGPSQPSP 129
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
+LNLAAVGL GA GG +GPDR+FVGGLPYY TE QI+ELLESFG L GFDLVKDR++GN
Sbjct: 130 SLNLAAVGLTPGAGGGVDGPDRIFVGGLPYYLTEPQIRELLESFGPLRGFDLVKDRESGN 189
Query: 193 SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIA 252
SKGYGFCVYQDP VTD+ACAALNGLKMGD+TLTVRRATA+ Q+ + IL+ A+
Sbjct: 190 SKGYGFCVYQDPNVTDVACAALNGLKMGDRTLTVRRATANGQQAGQDHAHILSLAK---- 245
Query: 253 IQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
+L +G+ E +VLCL EA+ L +DE+++EILEDMR+ECGK+
Sbjct: 246 ----SLTMNGV--------FPDEGATRVLCLKEAVLEAELIEDEQFDEILEDMRDECGKF 293
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
GT++++VIPRP Q E GVGKVF+ + D A+ +L+GRKF G V A YYPE++
Sbjct: 294 GTVLHLVIPRPSQ-AAEVDGVGKVFVHFEDTGAATRARISLNGRKFDGRAVVATYYPEEQ 352
Query: 373 YFNKDYS 379
+ D+S
Sbjct: 353 FMVGDFS 359
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/313 (71%), Positives = 251/313 (80%), Gaps = 16/313 (5%)
Query: 1 MAQNMLPFGA-TQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P G Q G P+MPVQ MTQQATRHARRVYVGGLPP ANEQ++ATFFS VM A
Sbjct: 223 MFPNMFPLGTGQQFGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMAA 282
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
IGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFEG V+VRRP+DYNP
Sbjct: 283 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 342
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QP+PNLNL AVGL G+ GG EGPDR+FVGGLPYYFTE QI+ELLESFG L
Sbjct: 343 SLAATLGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 402
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + Q K E
Sbjct: 403 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 462
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE++L AQQ IA+Q++ LQ KV+CLT+ +TAD L DD+EYE
Sbjct: 463 QETVLLHAQQQIALQRLMLQP---------------VPTKVVCLTQVVTADELKDDDEYE 507
Query: 300 EILEDMREECGKY 312
+ILEDMR E GK+
Sbjct: 508 DILEDMRTEGGKF 520
>gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa Japonica Group]
Length = 331
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/317 (68%), Positives = 250/317 (78%), Gaps = 11/317 (3%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK 81
Q MTQQATRHARRVYVGGLPP ANE +A +F+QVM A+GGN+AGPGDAV+NVYINH+KK
Sbjct: 22 QAMTQQATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKK 81
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
FAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAAALGP QP+PNLNLAAVGL
Sbjct: 82 FAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGL 141
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L GFDLVKDR+TGNSKGY FCVY
Sbjct: 142 TPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 201
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
QD VTDIACAALNG+KMGDKTLTVRRA + Q + EQES+L QQ +QK+ Q
Sbjct: 202 QDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQAQMQKLMFQVG 261
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
G G KV+CLT+ ++ D L DDEEYE+I++DMREE +YG LV V+ P
Sbjct: 262 G-----------GALPTKVVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYGNLVKVLNP 310
Query: 322 RPDQNGGETPGVGKVFL 338
RPD +G G G+ F
Sbjct: 311 RPDPSGAPVAGFGRCFW 327
>gi|30690730|ref|NP_849509.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|19310597|gb|AAL85029.1| putative splicing factor [Arabidopsis thaliana]
gi|332661289|gb|AEE86689.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 542
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/314 (69%), Positives = 250/314 (79%), Gaps = 14/314 (4%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P Q G +MP+Q MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM A
Sbjct: 206 MFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAA 265
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
+GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAM+LDGIIFEG V+VRRP+DYNP
Sbjct: 266 VGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNP 325
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QPSP+LNLAAVGL GA GG EGPDR+FVGGLPYYFTE+Q++ELLESFG L
Sbjct: 326 SLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGL 385
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + K E
Sbjct: 386 KGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPE 445
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE++L AQQ IA Q++ LQ + T V+CLT+ +T D L DDEEY
Sbjct: 446 QENVLLHAQQQIAFQRVMLQPGAVATT-------------VVCLTQVVTEDELRDDEEYG 492
Query: 300 EILEDMREECGKYG 313
+I+EDMR+E GK+G
Sbjct: 493 DIMEDMRQEGGKFG 506
>gi|42573197|ref|NP_974695.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661288|gb|AEE86688.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 565
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/313 (69%), Positives = 249/313 (79%), Gaps = 14/313 (4%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P Q G +MP+Q MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM A
Sbjct: 206 MFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAA 265
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
+GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAM+LDGIIFEG V+VRRP+DYNP
Sbjct: 266 VGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNP 325
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QPSP+LNLAAVGL GA GG EGPDR+FVGGLPYYFTE+Q++ELLESFG L
Sbjct: 326 SLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGL 385
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + K E
Sbjct: 386 KGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPE 445
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE++L AQQ IA Q++ LQ + T V+CLT+ +T D L DDEEY
Sbjct: 446 QENVLLHAQQQIAFQRVMLQPGAVATT-------------VVCLTQVVTEDELRDDEEYG 492
Query: 300 EILEDMREECGKY 312
+I+EDMR+E GK+
Sbjct: 493 DIMEDMRQEGGKF 505
>gi|222423510|dbj|BAH19725.1| AT4G36690 [Arabidopsis thaliana]
Length = 565
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/313 (69%), Positives = 249/313 (79%), Gaps = 14/313 (4%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P Q G +MP+Q MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM A
Sbjct: 206 MFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAA 265
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
+GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAM+LDGIIFEG V+VRRP+DYNP
Sbjct: 266 VGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNP 325
Query: 120 TLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTL 179
+LAA LGP QPSP+LNLAAVGL GA GG EGPDR+FVGGLPYYFTE+Q++ELLESFG L
Sbjct: 326 SLAATLGPSQPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGL 385
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE 239
GFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVRRA + K E
Sbjct: 386 KGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPE 445
Query: 240 QESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
QE++L AQQ IA Q++ LQ + T V+CLT+ +T D L DDEEY
Sbjct: 446 QENVLLHAQQQIAFQRVMLQPGAVATT-------------VVCLTQVVTEDELRDDEEYG 492
Query: 300 EILEDMREECGKY 312
+I+EDMR+E G++
Sbjct: 493 DIMEDMRQEGGRF 505
>gi|108864608|gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
Length = 550
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/311 (68%), Positives = 244/311 (78%), Gaps = 14/311 (4%)
Query: 5 MLP--FGATQLGAFPL-MPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
MLP F TQ PL + Q MTQQATRHARRVYVGGLPP ANE +A +F+QVM A+G
Sbjct: 207 MLPNMFNLTQTPFTPLVIQPQAMTQQATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVG 266
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTL 121
GN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+L
Sbjct: 267 GNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSL 326
Query: 122 AAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHG 181
AAALGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L G
Sbjct: 327 AAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRG 386
Query: 182 FDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQE 241
FDLVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQE
Sbjct: 387 FDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQE 446
Query: 242 SILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEI 301
S+L QQ +QK+ Q G G KV+CLT+ ++ D L DDEEYE+I
Sbjct: 447 SMLLHVQQQAQMQKLMFQVGG-----------GALPTKVVCLTQVVSPDELRDDEEYEDI 495
Query: 302 LEDMREECGKY 312
++DMREE +Y
Sbjct: 496 VQDMREEGCRY 506
>gi|413920348|gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
Length = 549
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/309 (69%), Positives = 246/309 (79%), Gaps = 13/309 (4%)
Query: 4 NMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
N+ A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A FF+ VM AIGGN
Sbjct: 232 NLYNLAAGQFNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGN 290
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNP+LAA
Sbjct: 291 TAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAA 350
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
ALGP QP+PNLNLAAVGL G+ GG EGPDR+FVGGLPYYFTE Q++ELLESFG L GFD
Sbjct: 351 ALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFD 410
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQESI
Sbjct: 411 LVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESI 470
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
L QAQQ + +QK+ Q +GG + KV+CLT+ +TAD L DDEEY +I+E
Sbjct: 471 LLQAQQQVQMQKLVYQ------VGGALP------TKVVCLTQVVTADELRDDEEYNDIVE 518
Query: 304 DMREECGKY 312
DMREE KY
Sbjct: 519 DMREEGRKY 527
>gi|414591746|tpg|DAA42317.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/310 (68%), Positives = 244/310 (78%), Gaps = 13/310 (4%)
Query: 4 NMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
N+ A Q + P Q MTQQATRHARRVYVGGLPP ANEQ +A FF+ VM AIGGN
Sbjct: 228 NLYNLAAGQFNPLAIQP-QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGN 286
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAM LDGI+FEG V++RRPTDYNP+LAA
Sbjct: 287 TAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAA 346
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
ALGP QP+PNLNL+AVGL G+ GG EGPDR+FVGGL YYFTE Q++ELLESFG L GFD
Sbjct: 347 ALGPSQPNPNLNLSAVGLTPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFD 406
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKDR+TGNSKGY FCVYQD VTDIACAALNG+KMGDKTLTVRRA + Q + EQESI
Sbjct: 407 LVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESI 466
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
L QAQQ + +QK Q +GG + KV+CLT+ +T D L DDEEY++I+E
Sbjct: 467 LLQAQQQVQMQKFVYQ------VGGALP------TKVVCLTQVVTEDELRDDEEYDDIVE 514
Query: 304 DMREECGKYG 313
DMREE KYG
Sbjct: 515 DMREEGHKYG 524
>gi|414591745|tpg|DAA42316.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 237/291 (81%), Gaps = 12/291 (4%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK 81
Q MTQQATRHARRVYVGGLPP ANEQ +A FF+ VM AIGGN+AGPGDAV+NVYINH+KK
Sbjct: 238 QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKK 297
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
FAFVEMR+VEEASNAM LDGI+FEG V++RRPTDYNP+LAAALGP QP+PNLNL+AVGL
Sbjct: 298 FAFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVGL 357
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
G+ GG EGPDR+FVGGL YYFTE Q++ELLESFG L GFDLVKDR+TGNSKGY FCVY
Sbjct: 358 TPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 417
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
QD VTDIACAALNG+KMGDKTLTVRRA + Q + EQESIL QAQQ + +QK Q
Sbjct: 418 QDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKFVYQ-- 475
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
+GG + KV+CLT+ +T D L DDEEY++I+EDMREE KY
Sbjct: 476 ----VGGALP------TKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKY 516
>gi|224030681|gb|ACN34416.1| unknown [Zea mays]
Length = 425
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 237/291 (81%), Gaps = 12/291 (4%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK 81
Q MTQQATRHARRVYVGGLPP ANEQ +A FF+ VM AIGGN+AGPGDAV+NVYINH+KK
Sbjct: 125 QAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVYINHDKK 184
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
FAFVEMR+VEEASNAM LDGI+FEG V++RRPTDYNP+LAAALGP QP+PNLNL+AVGL
Sbjct: 185 FAFVEMRSVEEASNAMVLDGIMFEGAPVKIRRPTDYNPSLAAALGPSQPNPNLNLSAVGL 244
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
G+ GG EGPDR+FVGGL YYFTE Q++ELLESFG L GFDLVKDR+TGNSKGY FCVY
Sbjct: 245 TPGSAGGLEGPDRIFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 304
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
QD VTDIACAALNG+KMGDKTLTVRRA + Q + EQESIL QAQQ + +QK Q
Sbjct: 305 QDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKFVYQ-- 362
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
+GG + KV+CLT+ +T D L DDEEY++I+EDMREE KY
Sbjct: 363 ----VGGALP------TKVVCLTQVVTEDELRDDEEYDDIVEDMREEGHKY 403
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/329 (63%), Positives = 245/329 (74%), Gaps = 25/329 (7%)
Query: 1 MAQNMLP--FGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMT 58
M NMLP LG PL MTQQATRHARRVYVGGLPP+ANEQ +A FF+QVM
Sbjct: 243 MFPNMLPNLVNVPALGQ-PL----AMTQQATRHARRVYVGGLPPIANEQTVAVFFNQVMA 297
Query: 59 AIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYN 118
AIGGN+ G AVVNVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYN
Sbjct: 298 AIGGNTFALGHAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYN 357
Query: 119 PTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGT 178
P+ AAALGP QP+PNLNLAAVGL GA GG EGPDR+FVGGLPYYFTE Q++ELLE+FG
Sbjct: 358 PSQAAALGPSQPNPNLNLAAVGLTPGAGGGLEGPDRIFVGGLPYYFTEAQVRELLETFGP 417
Query: 179 LHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKT 238
L GFD+VKD++TGNSKGY FC+Y+D VTDIACAALNG+++GD+TLTVRRA + +
Sbjct: 418 LRGFDIVKDKETGNSKGYAFCLYKDGTVTDIACAALNGIQLGDRTLTVRRAN-QGAEPRP 476
Query: 239 EQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETL-AKVLCLTEAITADALADDEE 297
EQE+IL QAQQ ++++ + G TL KV+CLT+ ++AD L DDEE
Sbjct: 477 EQENILLQAQQEAQMKRLVYEV-------------GRTLTTKVVCLTQVVSADDLRDDEE 523
Query: 298 YEEILEDMREECGKY---GTLVNVVIPRP 323
Y +ILEDM E KY T+ I RP
Sbjct: 524 YNDILEDMTLEGHKYVPHSTIAESFIIRP 552
>gi|242069431|ref|XP_002449992.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
gi|241935835|gb|EES08980.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
Length = 296
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/292 (69%), Positives = 233/292 (79%), Gaps = 15/292 (5%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK 81
Q MTQ ATRHARRVYVGGLPP ANEQ +A +F+Q+M AIGGN+AGPGDAV+NVYINH+KK
Sbjct: 9 QAMTQHATRHARRVYVGGLPPDANEQTVAVYFNQIMAAIGGNTAGPGDAVLNVYINHDKK 68
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
FA VEMR+VEEASNAMALDGI+FEGV V+VRRPTDYNP+LAAALGP QPSPNLNLAAVGL
Sbjct: 69 FASVEMRSVEEASNAMALDGIMFEGVPVKVRRPTDYNPSLAAALGPSQPSPNLNLAAVGL 128
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
+G+ GG E PDR+FVGGLPYYFTE Q++ELLESFG L GFDLVKD++TGNSKGY FC Y
Sbjct: 129 TAGS-GGLEDPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDKETGNSKGYAFCDY 187
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
QD VTDIACAALNG+KMGDK LTVRRA + Q EQESIL QAQQ + +QK+A
Sbjct: 188 QDLTVTDIACAALNGIKMGDKILTVRRANQGASQPTPEQESILLQAQQQVQMQKLAHPV- 246
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
G KV+CL ++AD L +DE YE+I++DMREE +YG
Sbjct: 247 ------------GAAPTKVVCLVHVVSADEL-EDEVYEDIMDDMREEARRYG 285
>gi|384249807|gb|EIE23288.1| hypothetical protein COCSUDRAFT_23864, partial [Coccomyxa
subellipsoidea C-169]
Length = 464
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 253/372 (68%), Gaps = 31/372 (8%)
Query: 7 PFGATQLGAFPLMP-VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
P TQ+G +MP VQ +QQATRHARRVYVGGLPP NEQ IATFFS + AIGG +A
Sbjct: 115 PMIGTQMGG--MMPGVQPPSQQATRHARRVYVGGLPPTGNEQNIATFFSNALAAIGGTTA 172
Query: 66 GPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAAL 125
GPG +VVNVYIN+EKKFAFVE RTVEE SNAMALDGI+FEGV+VRVRRP DYNP A+AL
Sbjct: 173 GPGASVVNVYINYEKKFAFVEFRTVEETSNAMALDGIMFEGVSVRVRRPNDYNPAAASAL 232
Query: 126 GPGQPSPNLNLAAVGLASG---AIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
GP P+PNLNLAA+GL +G A+ + +RVFVGGLPYY E Q +ELL SFG + F
Sbjct: 233 GPSVPNPNLNLAAIGLQAGGMNAVAMIDAAERVFVGGLPYYLNEEQCRELLGSFGGIKSF 292
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQES 242
DLVKDR+TGNSKGYGF VY DP VTDIACA LNG++MG++TLTVRRAT + G + +
Sbjct: 293 DLVKDRETGNSKGYGFVVYTDPNVTDIACAGLNGMRMGERTLTVRRATENQGGAAGAATA 352
Query: 243 ILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEIL 302
A T ++L L EA++ D LA+DEEY +I+
Sbjct: 353 AALSADPF------------------------PTATRILALQEAVSLDELANDEEYVDIV 388
Query: 303 EDMREECGKYGTLVNVVIPRPDQNGGETP-GVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
+DMR+E K+GT+++V+IPRP G P G+GKVF+ + + G + + GR+FGG
Sbjct: 389 QDMRDEASKFGTVIDVLIPRPAPEGQPPPSGLGKVFINFAEKEGAVNSFRVMHGRRFGGR 448
Query: 362 TVNAFYYPEDKY 373
TV A Y E Y
Sbjct: 449 TVVASYVQEADY 460
>gi|359497129|ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 238
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/237 (76%), Positives = 199/237 (83%), Gaps = 2/237 (0%)
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
IGGAEGPDR+FVGGLPYYFTE QI+ELLESFG L GFDLVKDRDTGNSKGYGFCVYQDPA
Sbjct: 2 IGGAEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPA 61
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
VTDIACAALNGLKMGDKTLTVRRAT SGQ+K+EQ++ILAQAQQHIAIQK+ALQ G+N
Sbjct: 62 VTDIACAALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGLNL 121
Query: 266 LGGGMSL--FGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP 323
G GM+ ET KVLCLTE I D L DDE YEEILEDMR+E GK+G LV+VVIPRP
Sbjct: 122 PGAGMAFTAIAETPTKVLCLTEVINIDELRDDEAYEEILEDMRDEGGKFGALVHVVIPRP 181
Query: 324 DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYSA 380
NG PGVGKVFLEY D G ++A+NALSGRKFGGN V+A YYPEDKY++ DY A
Sbjct: 182 SPNGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAVYYPEDKYYDGDYGA 238
>gi|297736736|emb|CBI25913.3| unnamed protein product [Vitis vinifera]
Length = 6467
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/237 (76%), Positives = 199/237 (83%), Gaps = 2/237 (0%)
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
IGGAEGPDR+FVGGLPYYFTE QI+ELLESFG L GFDLVKDRDTGNSKGYGFCVYQDPA
Sbjct: 6231 IGGAEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPA 6290
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
VTDIACAALNGLKMGDKTLTVRRAT SGQ+K+EQ++ILAQAQQHIAIQK+ALQ G+N
Sbjct: 6291 VTDIACAALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQKIALQAGGLNL 6350
Query: 266 LGGGMSL--FGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP 323
G GM+ ET KVLCLTE I D L DDE YEEILEDMR+E GK+G LV+VVIPRP
Sbjct: 6351 PGAGMAFTAIAETPTKVLCLTEVINIDELRDDEAYEEILEDMRDEGGKFGALVHVVIPRP 6410
Query: 324 DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYSA 380
NG PGVGKVFLEY D G ++A+NALSGRKFGGN V+A YYPEDKY++ DY A
Sbjct: 6411 SPNGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAVYYPEDKYYDGDYGA 6467
>gi|159473054|ref|XP_001694654.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158276466|gb|EDP02238.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 306
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 175/300 (58%), Positives = 218/300 (72%), Gaps = 7/300 (2%)
Query: 24 MTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFA 83
++QQATRHARR+YVGGLPP A EQ+I++FFS + AIGGN+AGPG+AVVNVYIN EK FA
Sbjct: 4 VSQQATRHARRIYVGGLPPTATEQSISSFFSHALAAIGGNTAGPGNAVVNVYINREKNFA 63
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
FVE+RTVEE SN+MALDGI+FEGV+VRVRRP DYNP A +LGP P+P LNLAA+GL
Sbjct: 64 FVELRTVEETSNSMALDGIMFEGVSVRVRRPNDYNPAAAVSLGPSTPNPALNLAAIGLNP 123
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
+ PDR+FVGGLPYY TE Q +ELL SFG + FDLVKDRDTGNSKGYGF VYQD
Sbjct: 124 N-----DNPDRIFVGGLPYYLTEDQCRELLGSFGAIKSFDLVKDRDTGNSKGYGFVVYQD 178
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGM 263
+VTDIACA LNGLKMGD+TLTVRRAT + A + +
Sbjct: 179 TSVTDIACAGLNGLKMGDRTLTVRRATEGAPGGGAAPAMGPAGLGGLAGLGGLNPLAGVG 238
Query: 264 NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP 323
+ + L T +++ LT+A++A+ + DD+EY++ILEDM++E ++G NV+IPRP
Sbjct: 239 GVVVNPLGL--ATATRIVVLTDAVSAEEIIDDQEYQDILEDMKDEASRHGLCNNVLIPRP 296
>gi|302846543|ref|XP_002954808.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
gi|300259991|gb|EFJ44214.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
Length = 532
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/357 (51%), Positives = 237/357 (66%), Gaps = 15/357 (4%)
Query: 24 MTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGD-AVVNVYINHEKKF 82
++QQATRHARR+YVGGLPP A EQ+I++FFS + AIGGN+AGPG + I +
Sbjct: 187 VSQQATRHARRIYVGGLPPTATEQSISSFFSHALAAIGGNTAGPGGFPFHSTSITSPQSI 246
Query: 83 AFVEMRT-VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
+R +EE SNAMALDGI+FEGV+VRVRRP DYNP AA+LGP P+PNLNLAA+GL
Sbjct: 247 RSSILREFIEETSNAMALDGIMFEGVSVRVRRPNDYNPAAAASLGPSTPNPNLNLAAIGL 306
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
++ A GGA+ DR+FVGGLPYY TE Q +ELL SFG + FDLVKDR+TGNSKGYGF VY
Sbjct: 307 SNAAGGGADQADRIFVGGLPYYLTEEQCRELLGSFGPIKSFDLVKDRETGNSKGYGFVVY 366
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
QD AVTDIACA LNGL+MGD+TLTVRRAT + + + AL
Sbjct: 367 QDSAVTDIACAGLNGLRMGDRTLTVRRATEGAPSASGAGAA-----------ASTALGPP 415
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
G+ + ++ G + + L ++A+ + D+ EYE+IL DM++E ++G NV+IP
Sbjct: 416 GL--VPAALANLGVGVGVGVGLNPLVSAEEIVDNTEYEDILADMKDEASRHGLCNNVLIP 473
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
RP PG+ KV +E+ D A+NA+ GR+F G VNA Y E+ YF+ Y
Sbjct: 474 RPTAENPNPPGMCKVIMEFNDVNSAVKARNAMHGRRFAGRVVNATYLTEEAYFSGRY 530
>gi|308801273|ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
Length = 388
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 234/352 (66%), Gaps = 31/352 (8%)
Query: 24 MTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFA 83
+T Q TRHARR+Y+GG P +ANEQ +++FF+ + A+GG ++ VVNVYIN EKKFA
Sbjct: 49 ITAQTTRHARRIYLGGCPTMANEQELSSFFNDALVAVGGTTSEEA-PVVNVYINLEKKFA 107
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
FVE R+VEE SNA+ALDG++ +G VR+RRP DYNP +A LGP P+P LNL A+GL
Sbjct: 108 FVEFRSVEECSNALALDGVMIQGEPVRIRRPNDYNPQIAQGLGPSTPNPKLNLQAIGLDP 167
Query: 144 GAIGGA-------EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
A+ + E P+R+F+GGLPYY E Q++ELLE+FG + FDLV+D++ GNSKGY
Sbjct: 168 SALARSATTNILQEDPNRIFIGGLPYYLEEPQVRELLEAFGPIARFDLVRDKENGNSKGY 227
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
GF VYQD AVTDIAC LNG++MG+KTLTVRRA Q +T+ L Q +
Sbjct: 228 GFVVYQDAAVTDIACQGLNGMQMGEKTLTVRRAE----QGRTD----LIGGQVSVPPPPA 279
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTE-AITADALADDEEYEEILEDMREECGKYGTL 315
+ ++V+ T IT + LADDEE+E I+EDM EECGKYG +
Sbjct: 280 IAPAN--------------PPSEVVSFTNMGITEEELADDEEFENIMEDMNEECGKYGKI 325
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
++VVIPRP ++G G+GKVF+ Y A++AL+GR+FGGN+V A +
Sbjct: 326 ISVVIPRPSKSGESVTGIGKVFVRYESVEDATKARDALNGRRFGGNSVVADF 377
>gi|302813497|ref|XP_002988434.1| hypothetical protein SELMODRAFT_24180 [Selaginella moellendorffii]
gi|300143836|gb|EFJ10524.1| hypothetical protein SELMODRAFT_24180 [Selaginella moellendorffii]
Length = 339
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/375 (50%), Positives = 234/375 (62%), Gaps = 39/375 (10%)
Query: 5 MLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNS 64
+LP G QL MP Q T+ ARRVYVGGLP + +E IATFF+ M I GN+
Sbjct: 3 VLPAGIAQLPVVLRMP---QMPQITKPARRVYVGGLPAVVDEARIATFFNHAMAVIEGNT 59
Query: 65 AGPG-DAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
G G DAVV+V+I+H K +AFVEMR+VEEASNAMALDGIIFEG VR+RRP++YNP A
Sbjct: 60 YGQGGDAVVSVFIDHAKNYAFVEMRSVEEASNAMALDGIIFEGSQVRIRRPSNYNPEHAM 119
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
G QPSP+L L VGL A A+GPDR+F+GGLPY + + ++++LLE FG L D
Sbjct: 120 LFGSSQPSPSLRLDKVGLVYRA--HADGPDRIFIGGLPYEWGDAEVRQLLEPFGALRALD 177
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
+VKD T SKGYGF VY++PA TD ACAALN + K L V RAT SSG
Sbjct: 178 IVKDSYTRKSKGYGFAVYENPASTDAACAALNQKPLEGKILRVHRATNSSGNPAL----- 232
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
+ Q+S + T +V+CL A++ + L D++EY EI+E
Sbjct: 233 -----------VLLPQSSELGT-------------RVVCLCNAVSEEMLRDEKEYAEIIE 268
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
DM+EECGKYG LV+V IPR G PG+GKVFLEY D V A++ L GR F TV
Sbjct: 269 DMKEECGKYGPLVSVEIPR----GDGAPGLGKVFLEYKDLVSALKARHGLQGRSFDKRTV 324
Query: 364 NAFYYPEDKYFNKDY 378
A YYPEDK+ KDY
Sbjct: 325 QATYYPEDKFSAKDY 339
>gi|302796203|ref|XP_002979864.1| hypothetical protein SELMODRAFT_153568 [Selaginella moellendorffii]
gi|300152624|gb|EFJ19266.1| hypothetical protein SELMODRAFT_153568 [Selaginella moellendorffii]
Length = 325
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 185/364 (50%), Positives = 229/364 (62%), Gaps = 42/364 (11%)
Query: 16 FPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPG-DAVVNV 74
P MP Q T+ ARRVYVGGLP + +E IATFF+ M I GN+ G G DAVV+V
Sbjct: 1 MPQMP------QITKPARRVYVGGLPAVVDEARIATFFNHAMAVIEGNTYGQGGDAVVSV 54
Query: 75 YINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNL 134
+I+H K +AFVEMR+VEEASNAMALDGIIFEG VR+RRP++YNP A G QPSP+L
Sbjct: 55 FIDHAKNYAFVEMRSVEEASNAMALDGIIFEGSQVRIRRPSNYNPEHAMLFGSSQPSPSL 114
Query: 135 NLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK 194
L VGL A A+GPDR+F+GGLPY + + ++++LLE FG L D+VKD T SK
Sbjct: 115 RLDKVGLVYRA--HADGPDRIFIGGLPYEWGDAEVRQLLEPFGALRALDIVKDSYTRKSK 172
Query: 195 GYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQ 254
GYGF VY++PA TD ACAALN + K L V RAT SSG
Sbjct: 173 GYGFAVYENPASTDAACAALNQKPLEGKILRVHRATNSSGNPAL---------------- 216
Query: 255 KMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
+ Q+S + T +V+CL A++ + L D++EY EI+EDM+EECGKYG
Sbjct: 217 VLLPQSSELGT-------------RVVCLCNAVSEEMLRDEKEYAEIIEDMKEECGKYGP 263
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
LV+V IPR G PG+GKVFLEY D V A++ L GR F TV A YYPEDK+
Sbjct: 264 LVSVEIPR----GDGAPGLGKVFLEYKDLVSALKARHGLQGRSFDKRTVQATYYPEDKFS 319
Query: 375 NKDY 378
KDY
Sbjct: 320 AKDY 323
>gi|255073589|ref|XP_002500469.1| RNA binding protein [Micromonas sp. RCC299]
gi|226515732|gb|ACO61727.1| RNA binding protein [Micromonas sp. RCC299]
Length = 489
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 188/375 (50%), Positives = 243/375 (64%), Gaps = 19/375 (5%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAG-PGDAVVNVYINHEKK 81
V QQATRHARRVYVG LP E +A FF+ M AIGG A PGD V+NVYIN+EKK
Sbjct: 115 VPNQQATRHARRVYVGNLPGTVTEPKVAAFFNNAMHAIGGTVAALPGDPVLNVYINYEKK 174
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
FAFVE RTVEE SN MALDG + EG+A+RVRRP DYN A++LGP QP LNL A+GL
Sbjct: 175 FAFVEFRTVEETSNCMALDGAVLEGIAMRVRRPNDYNVMAASSLGPSQPKDGLNLEAIGL 234
Query: 142 ------------ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRD 189
A+ ++ + R+F+GGLPY+ TET +KEL+E+FG F LV DR+
Sbjct: 235 NPAAAGGGGAGAANASLTEEDLQHRLFIGGLPYFLTETMVKELVEAFGPTKQFQLVVDRE 294
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT-ASSGQSKTEQESILAQAQ 248
TGNSKGYGF VYQD +VTD+AC L+G+KMG+K+LTV+RA +G K S+
Sbjct: 295 TGNSKGYGFFVYQDHSVTDVACQGLHGMKMGEKSLTVQRAMQGGAGAPKPTAASVGPGHT 354
Query: 249 QHIAIQKMALQTSGMNTLGGGMSL----FGETLAKVLCLTEAITADALADDEEYEEILED 304
++A +G + G+S+ ++V+ LTE + + L DD EY EI+ED
Sbjct: 355 ALPGADEVAAHLAGASGAPAGLSVPPPPSEHPASRVVSLTEMLDVEELRDDVEYGEIMED 414
Query: 305 MREECGKYGTLVNVVIPRP-DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
MREECGK+G + ++VIPRP D +G PG+GKVF+ Y D G A A+NAL GRKFGGN V
Sbjct: 415 MREECGKFGRIESIVIPRPGDADGAAVPGLGKVFVRYEDDAGAAAARNALHGRKFGGNVV 474
Query: 364 NAFYYPEDKYFNKDY 378
A + E + ++ +
Sbjct: 475 KADFIDETVFASRAF 489
>gi|303273844|ref|XP_003056274.1| RNA binding protein [Micromonas pusilla CCMP1545]
gi|226462358|gb|EEH59650.1| RNA binding protein [Micromonas pusilla CCMP1545]
Length = 564
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/409 (46%), Positives = 247/409 (60%), Gaps = 54/409 (13%)
Query: 25 TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG---NSAGPG-DAVVNVYINHEK 80
+ QATRHARR+YVGGLP ANE + ATFFS + AIGG +A G + V+NVY+NHEK
Sbjct: 156 STQATRHARRIYVGGLPATANEASTATFFSNALAAIGGVVQTAAAAGVEPVLNVYMNHEK 215
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
KFAFVE RTVEE SNA+ALDG++F+GV++RVRRP DYN +AA LGP PS +L+LAA+G
Sbjct: 216 KFAFVEFRTVEETSNAIALDGVVFDGVSLRVRRPNDYNAAIAATLGPSTPSTDLDLAAIG 275
Query: 141 LASGA------------------IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
L GA + + +R+FVGGLPY+ TE +KEL+E+FG F
Sbjct: 276 LVPGAGGAAGGAGAGGAAGGQNNLSPEDTANRLFVGGLPYFLTEPMVKELVEAFGPTKHF 335
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ-- 240
LV DR+TGNSKGYGF VYQD AVTD+AC L+G+KMG+KTLTVRRAT + G +
Sbjct: 336 MLVMDRETGNSKGYGFFVYQDHAVTDVACQGLHGMKMGEKTLTVRRATGAGGGAAGATNA 395
Query: 241 -----------ESILAQAQQHIA-IQKMALQTSGMNTLGGGMSLFGETLA---------- 278
+ +A+A+ ++ A G G SL L+
Sbjct: 396 SGLAGGAGGAPSTRVAEAEDATTGGERAARAPRGAMPRGAXASLTARFLSCRCCLTDPPP 455
Query: 279 ------KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGE--T 330
+VL L + + + L DD EY EI EDMREECGK+G ++ V IPRP GG+
Sbjct: 456 PSNPPSRVLSLNDMLDVEDLRDDVEYGEITEDMREECGKHGVVLEVRIPRPAAAGGDEIV 515
Query: 331 PGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
PG+GKVF++Y + G A+ AL GRKFGG V A + E + YS
Sbjct: 516 PGLGKVFVQYEEVAGAEAARKALHGRKFGGQIVVADFVDEAAFAEGRYS 564
>gi|242069429|ref|XP_002449991.1| hypothetical protein SORBIDRAFT_05g026783 [Sorghum bicolor]
gi|241935834|gb|EES08979.1| hypothetical protein SORBIDRAFT_05g026783 [Sorghum bicolor]
Length = 249
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 152/228 (66%), Positives = 179/228 (78%), Gaps = 1/228 (0%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P Q+MT++AT RRVYVG LPP ANEQ I FF+QVM IGGN+AGPGDAV + +
Sbjct: 11 PHTTTQLMTREATLFTRRVYVGDLPPSANEQTIGVFFNQVMAVIGGNTAGPGDAVCGICM 70
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
NHE++FA VE R EEASNAMALDGI+FEGV V+VRRP DYN + AAA+GP QPS LNL
Sbjct: 71 NHEQRFALVEFRMAEEASNAMALDGILFEGVPVKVRRPADYNLSQAAAMGPTQPSRKLNL 130
Query: 137 AAVGLASGAI-GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
AAVGL +G+ GG+E PDR+FVGGLPYY++E Q+++LLE G L GF+LVKDR+TGNSKG
Sbjct: 131 AAVGLTAGSAGGGSEDPDRIFVGGLPYYYSEAQVRDLLECIGPLRGFELVKDRETGNSKG 190
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
Y FCVY D TDIACA LNG+KMGDK LTVRRA S+ Q + EQESI
Sbjct: 191 YAFCVYMDTTATDIACADLNGIKMGDKILTVRRANQSASQPRPEQESI 238
>gi|145344032|ref|XP_001416543.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576769|gb|ABO94836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 291
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/307 (52%), Positives = 201/307 (65%), Gaps = 24/307 (7%)
Query: 25 TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAF 84
T QATRHARR+YVGG+P NE + FF+ + A+GG + G VVNVYIN EKKFAF
Sbjct: 1 TAQATRHARRIYVGGIPLTTNEADVNAFFNNALLAVGGTNGAEGQPVVNVYINVEKKFAF 60
Query: 85 VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASG 144
VE R+VEEASNA+ALDGI+ +GV VR+RRP DYNP+LA LGP P+P LNLAA+GL
Sbjct: 61 VEFRSVEEASNALALDGIVLDGVPVRIRRPNDYNPSLAHDLGPSMPNPALNLAAIGLDPS 120
Query: 145 A-----IGG---AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
A +GG E DR+F+GGLPY+ E QI+ELLE+FG + FDLV+D++TGNSKGY
Sbjct: 121 ALQRAGVGGNLLHEHEDRIFIGGLPYFLDEAQIRELLEAFGPIRQFDLVRDKETGNSKGY 180
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
GF VY+D +VTDIAC LNG+ MGDKTLTVRRA S+ + +
Sbjct: 181 GFVVYEDVSVTDIACQGLNGMTMGDKTLTVRRAEQSNAPGGVQPGMMNVPPPPPAIAAPP 240
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
S + + +T + LADDEEYE I+EDM+EECGK+G +V
Sbjct: 241 TNPPSTVVSFD----------------NMGLTEEELADDEEYENIMEDMQEECGKHGEIV 284
Query: 317 NVVIPRP 323
+VVIPRP
Sbjct: 285 SVVIPRP 291
>gi|412990165|emb|CCO19483.1| predicted protein [Bathycoccus prasinos]
Length = 495
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 221/389 (56%), Gaps = 53/389 (13%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG----NSAGPGDAVVNVYINHEKKF 82
QATRHARRVYVGG PP +E +A FF+ + A+GG + G + VVNVY+NHEK F
Sbjct: 121 QATRHARRVYVGGFPPNVSEVRVADFFNNALMAVGGIAETQTEGNANPVVNVYMNHEKHF 180
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
AFVE R EE SN MALD I F+ +RVRRP DYN A LGP P+ +NL A+GL+
Sbjct: 181 AFVEFRNAEETSNCMALDSISFDSSQLRVRRPNDYNQPAAMKLGPIVPNIKMNLEAIGLS 240
Query: 143 SGAI-------------GGAEGP-------DRVFVGGLPYYFTETQIKELLESFGTLHGF 182
+ + G A G DRVFVGGLPY+ TE QI+ELLE+FG + F
Sbjct: 241 NEVLQRMQSGVASGQNNGNANGSNVADPNEDRVFVGGLPYFLTEAQIRELLEAFGPITRF 300
Query: 183 DLVKDRDTGNSKGYGFCVYQD-PAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQE 241
DLV+DRDTG SKGYGF VY+D PA+TDIA L+G++MGDK LTVRRA A+ E
Sbjct: 301 DLVRDRDTGGSKGYGFVVYRDGPAITDIAIQGLHGMQMGDKQLTVRRANAT-------LE 353
Query: 242 SILAQAQQHIAIQKMALQTSGMNTLGGGMSLF------------GETLAKVLCLTE-AIT 288
+ + + + Q+ Q G GG + F E + L L I
Sbjct: 354 RMQQEQRAALQQQQQQHQLLGN---GGAAAQFLPQSAAPAAPEVDENATECLVLKNMGIK 410
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT 348
+ L D EEYE I+ED +EEC K+G ++ + IP+P + G VF+ + A
Sbjct: 411 DEELNDPEEYEIIVEDTQEECEKFGKVLGMKIPKP-----PSKSAGVVFVRFETAESARK 465
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKYFNKD 377
A+ +L+GRKF GN V+A Y + Y D
Sbjct: 466 ARKSLNGRKFAGNIVSAQYDSIETYEKHD 494
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 220/372 (59%), Gaps = 35/372 (9%)
Query: 6 LPFGATQLGAFPLMPV-QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNS 64
L F A P+ P Q TQQAT+HARR+YVG LP E +A FF+ + G
Sbjct: 181 LDFSALSQYMIPVAPTTQPNTQQATKHARRLYVGNLPSDVTESEVADFFNSALYLAKGVD 240
Query: 65 AGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAA 124
PGD V +VY+N +K+FAF+E+ + EA+ A+ +DG++F G+++R+RRP DYNP + A
Sbjct: 241 V-PGDPVQSVYLNLDKRFAFIELNSAAEAAAAIQMDGVLFRGMSLRMRRPNDYNPNIHA- 298
Query: 125 LGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDL 184
P P + +A+G+ S + +GPD+VF+GGLPY+ TE QIKE+L S+G L+ F+L
Sbjct: 299 --PVYPPIGFDPSALGVVSTQV--PDGPDKVFIGGLPYHLTEDQIKEILSSYGPLNAFNL 354
Query: 185 VKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESIL 244
VKD +TG SKGY F Y+DP++ + A LNG+ MGDKTLTVRRA+ S
Sbjct: 355 VKDPNTGLSKGYAFFQYKDPSIVEAAIKGLNGMTMGDKTLTVRRASQVS----------- 403
Query: 245 AQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILED 304
SG LG S ++L L + + L DDEEYE+I+ED
Sbjct: 404 ----------------SGSVELGQSFSPTVRYPTRILELRNMVEPEELVDDEEYEDIIED 447
Query: 305 MREECGKYGTLVNVVIPRPDQ-NGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
+REE KYG + V IPRP + + PG+GKVF+ + A AL+GR+FGG +V
Sbjct: 448 VREESSKYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSDAEKAFAALTGRRFGGKSV 507
Query: 364 NAFYYPEDKYFN 375
A YY E++Y++
Sbjct: 508 IANYYDEERYYS 519
>gi|348510219|ref|XP_003442643.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 466
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 207/359 (57%), Gaps = 28/359 (7%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V ++ Q TR ARR+YVG +P E+++A FF+ M + G S P + V+ V IN +K
Sbjct: 135 VPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 193
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P + P P G
Sbjct: 194 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFHVP-------G 246
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ S + + P ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY FC
Sbjct: 247 VVSTVV--PDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE 304
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y D + TD A A LNG+++GDK L V+R AS G SI+ + LQ
Sbjct: 305 YVDISATDQAVAGLNGMQLGDKKLIVQR--ASVGAKNANPTSIIETP--------VTLQV 354
Query: 261 SGMNTL-GGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ L GM +VLCL + + L DDE+YEEILED+REEC KYGT+ ++
Sbjct: 355 PGLQRLQNSGMP------TEVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGTVRSIE 408
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+EY A C A AL+GRKF V YY D Y ++
Sbjct: 409 IPRP-VDGVEVPGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF 466
>gi|348510223|ref|XP_003442645.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 467
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 207/359 (57%), Gaps = 28/359 (7%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V ++ Q TR ARR+YVG +P E+++A FF+ M + G S P + V+ V IN +K
Sbjct: 136 VPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 194
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P + P P G
Sbjct: 195 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFHVP-------G 247
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ S + + P ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY FC
Sbjct: 248 VVSTVV--PDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE 305
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y D + TD A A LNG+++GDK L V+R AS G SI+ + LQ
Sbjct: 306 YVDISATDQAVAGLNGMQLGDKKLIVQR--ASVGAKNANPTSIIETP--------VTLQV 355
Query: 261 SGMNTL-GGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ L GM +VLCL + + L DDE+YEEILED+REEC KYGT+ ++
Sbjct: 356 PGLQRLQNSGMP------TEVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGTVRSIE 409
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+EY A C A AL+GRKF V YY D Y ++
Sbjct: 410 IPRP-VDGVEVPGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF 467
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 222/387 (57%), Gaps = 49/387 (12%)
Query: 6 LPFGATQLGAFPLMPV-QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNS 64
L F A P+ P Q TQQAT+HARR+YVG LP E +A FF+ + G
Sbjct: 181 LDFSALSQYMIPVAPTTQPNTQQATKHARRLYVGNLPSDVTESEVADFFNSALYLAKGVD 240
Query: 65 AGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAA 124
PGD V +VY+N +K+FAF+E+ + EA+ A+ +DG++F G+++R+RRP DYNP + A
Sbjct: 241 V-PGDPVQSVYLNLDKRFAFIELNSAAEAAAAIQMDGVLFRGMSLRMRRPNDYNPNIHAP 299
Query: 125 LGPGQPSPNL---------------NLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQI 169
+ P P L + +A+G+ S + +GPD+VF+GGLPY+ TE QI
Sbjct: 300 VYP--PVCQLLTCFLGYIEKFQIGFDPSALGVVSTQV--PDGPDKVFIGGLPYHLTEDQI 355
Query: 170 KELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRA 229
KE+L S+G L+ F+LVKD +TG SKGY F Y+DP++ + A LNG+ MGDKTLTVRRA
Sbjct: 356 KEILSSYGPLNAFNLVKDPNTGLSKGYAFFQYKDPSIVEAAIKGLNGMTMGDKTLTVRRA 415
Query: 230 TASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITA 289
+ S SG LG S ++L L +
Sbjct: 416 SQVS---------------------------SGSVELGQSFSPTVRYPTRILELRNMVEP 448
Query: 290 DALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQ-NGGETPGVGKVFLEYYDAVGCAT 348
+ L DDEEYE+I+ED+REE KYG + V IPRP + + PG+GKVF+ +
Sbjct: 449 EELVDDEEYEDIIEDVREESSKYGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSDAEK 508
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKYFN 375
A AL+GR+FGG +V A YY E++Y++
Sbjct: 509 AFAALTGRRFGGKSVIANYYDEERYYS 535
>gi|159487587|ref|XP_001701804.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158281023|gb|EDP06779.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 309
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 208/329 (63%), Gaps = 21/329 (6%)
Query: 52 FFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRV 111
FF+Q+M A G + PG V++ ++N++K+FAF+EMR VEE SNAMA DGI +G ++V
Sbjct: 1 FFNQIMMASGATTQ-PGPPVMSCFMNNDKRFAFLEMRCVEETSNAMAFDGIQCQGEVLKV 59
Query: 112 RRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKE 171
RRP DYNP A LGP PSP +NLA +G+ + + +GP++V++GGLP +E Q+++
Sbjct: 60 RRPHDYNPAAAKLLGPTDPSPKVNLALLGVINTLV--EDGPNKVYIGGLPACLSEEQVRQ 117
Query: 172 LLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
+L++FGTL F+LV DR+TGNSKGYGFC Y DP+VTD A L+ L + K LT RRA
Sbjct: 118 ILQAFGTLKAFNLVLDRETGNSKGYGFCEYADPSVTDSAIQGLSALIIQGKPLTARRANT 177
Query: 232 SSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADA 291
S+ S T Q I QQ A+ S + GGG + V+ L++ ++ D
Sbjct: 178 SAETSLTLQTLI---EQQQAAL------VSTTSPAGGGHT--------VVRLSKMVSRDD 220
Query: 292 LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNG-GETPGVGKVFLEYYDAVGCATAK 350
L DD EY ++L+D+ EE GKYG LV V IPRP G + PGVG VFL Y D VG A+
Sbjct: 221 LLDDGEYADLLDDITEEVGKYGKLVGVEIPRPGAAGAADPPGVGLVFLCYEDTVGAKRAQ 280
Query: 351 NALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
AL GR+FG N A +Y ++ +D++
Sbjct: 281 VALKGRQFGANVAEATFYDRARFDARDFA 309
>gi|348510221|ref|XP_003442644.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 467
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 208/359 (57%), Gaps = 27/359 (7%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V ++ Q TR ARR+YVG +P E+++A FF+ M + G S P + V+ V IN +K
Sbjct: 135 VPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 193
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P + P P G
Sbjct: 194 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPAFHVP-------G 246
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ S + + P ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY FC
Sbjct: 247 VVSTVV--PDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE 304
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIA-IQKMALQ 259
Y D + TD A A LNG+++GDK L V+RA+ + + S + +Q+ LQ
Sbjct: 305 YVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPVSTSGNTPVTLQVPGLQR--LQ 362
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
SGM T +VLCL + + L DDE+YEEILED+REEC KYGT+ ++
Sbjct: 363 NSGMPT-------------EVLCLLNMVMPEELVDDEDYEEILEDIREECCKYGTVRSIE 409
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+EY A C A AL+GRKF V YY D Y ++
Sbjct: 410 IPRP-VDGVEVPGCGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF 467
>gi|147902896|ref|NP_001080595.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus laevis]
gi|111185517|gb|AAH44032.2| U2af2 protein [Xenopus laevis]
Length = 456
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 214/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 179
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 232
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 233 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 290
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 291 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 345
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DD+EYEEI+ED+R+ECGKYG + ++
Sbjct: 346 SSQVQ-MGGHPT-------EVLCLMNMVVPEELIDDDEYEEIVEDVRDECGKYGAVKSIE 397
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 398 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDGYHRRDF 455
>gi|410903105|ref|XP_003965034.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 454
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 210/359 (58%), Gaps = 28/359 (7%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ Q TR ARR+YVG +P E+++A FF+ M + G S P + V+ V IN +K
Sbjct: 123 VPVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 181
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P + P P G
Sbjct: 182 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPVFHVP-------G 234
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ S + + P ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY FC
Sbjct: 235 VVSTVV--PDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE 292
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA-LQ 259
Y D + TD A A LNG+++GDK L V+RA+ +K S + +A + + + LQ
Sbjct: 293 YVDVSATDQAVAGLNGMQLGDKKLIVQRASVG---AKNANPSAIIEAPVTLQVPGLQRLQ 349
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
SGM T +VLCL + + L DD++YEEILED+REEC KYG++ ++
Sbjct: 350 NSGMPT-------------EVLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSIE 396
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G + PG GK+F+EY A C A AL+GRKF V YY D Y ++
Sbjct: 397 IPRP-VDGVDVPGCGKIFVEYVSASDCQKAMQALTGRKFANRVVVTKYYDLDLYHRHEF 454
>gi|389610875|dbj|BAM19048.1| U2 small nuclear riboprotein auxiliary factor 50 [Papilio polytes]
Length = 422
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 212/362 (58%), Gaps = 22/362 (6%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ FF+Q M + G + G+ V+ I
Sbjct: 83 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSGLAQAAGNPVLACQI 141
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P +N+
Sbjct: 142 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGTENPAINV 195
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
A G+ S + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKGY
Sbjct: 196 PA-GVISTVV--PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGY 252
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
F Y D ++TD A A LNG+++GDK L V+RA+ + S ++ Q +
Sbjct: 253 AFAEYVDISMTDQAIAGLNGMQLGDKKLIVQRASIGAKNS-----TLGVYIQSMTGAAPV 307
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
LQ +G+ G G + +VLCL +T D L D+EEYE+ILED++EEC KYG +
Sbjct: 308 TLQVAGLTLAGAGPA------TEVLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGCVR 361
Query: 317 NVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNK 376
++ IPRP + G + PG GKVF+E+ C A+ L+GRKF V YY DKY +
Sbjct: 362 SIEIPRPLE-GVDVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYYDPDKYHRR 420
Query: 377 DY 378
++
Sbjct: 421 EF 422
>gi|410903103|ref|XP_003965033.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 446
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 210/359 (58%), Gaps = 28/359 (7%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ Q TR ARR+YVG +P E+++A FF+ M + G S P + V+ V IN +K
Sbjct: 115 VPVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 173
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P + P P G
Sbjct: 174 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPVFHVP-------G 226
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ S + + P ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY FC
Sbjct: 227 VVSTVV--PDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE 284
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA-LQ 259
Y D + TD A A LNG+++GDK L V+RA+ +K S + +A + + + LQ
Sbjct: 285 YVDVSATDQAVAGLNGMQLGDKKLIVQRASVG---AKNANPSAIIEAPVTLQVPGLQRLQ 341
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
SGM T +VLCL + + L DD++YEEILED+REEC KYG++ ++
Sbjct: 342 NSGMPT-------------EVLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSIE 388
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G + PG GK+F+EY A C A AL+GRKF V YY D Y ++
Sbjct: 389 IPRP-VDGVDVPGCGKIFVEYVSASDCQKAMQALTGRKFANRVVVTKYYDLDLYHRHEF 446
>gi|410903107|ref|XP_003965035.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 461
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 210/359 (58%), Gaps = 28/359 (7%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ Q TR ARR+YVG +P E+++A FF+ M + G S P + V+ V IN +K
Sbjct: 130 VPVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 188
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P + P P G
Sbjct: 189 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPVFHVP-------G 241
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ S + + P ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY FC
Sbjct: 242 VVSTVV--PDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCE 299
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA-LQ 259
Y D + TD A A LNG+++GDK L V+RA+ +K S + +A + + + LQ
Sbjct: 300 YVDVSATDQAVAGLNGMQLGDKKLIVQRASVG---AKNANPSAIIEAPVTLQVPGLQRLQ 356
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
SGM T +VLCL + + L DD++YEEILED+REEC KYG++ ++
Sbjct: 357 NSGMPT-------------EVLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSIE 403
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G + PG GK+F+EY A C A AL+GRKF V YY D Y ++
Sbjct: 404 IPRP-VDGVDVPGCGKIFVEYVSASDCQKAMQALTGRKFANRVVVTKYYDLDLYHRHEF 461
>gi|47575746|ref|NP_001001217.1| U2 small nuclear RNA auxiliary factor 2 isoform 2 [Xenopus
(Silurana) tropicalis]
gi|45709722|gb|AAH67966.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
[Xenopus (Silurana) tropicalis]
Length = 456
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 214/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 179
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 232
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 233 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 290
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 291 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 345
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DD+EYEEI+ED+R+ECGKYG + ++
Sbjct: 346 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDDEYEEIVEDVRDECGKYGAVKSIE 397
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 398 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDGYHRRDF 455
>gi|289741197|gb|ADD19346.1| splicing factor U2AF large subunit [Glossina morsitans morsitans]
Length = 423
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 211/371 (56%), Gaps = 27/371 (7%)
Query: 10 ATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGD 69
A L P V V+ TR ARR+YVG +P E + FF+Q M G A G+
Sbjct: 78 ANALPEIPQAAVPVVGSTITRQARRLYVGNIPFGVTEDEMMEFFNQQMHLTGLAQAA-GN 136
Query: 70 AVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG- 128
V+ IN +K FAF+E R+ +E + AMA DGI F+G ++++RRP DY P PG
Sbjct: 137 PVLACQINLDKNFAFLEFRSTDETTQAMAFDGISFKGQSLKIRRPHDYQPM------PGV 190
Query: 129 -QPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
+ +P A G+ S + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD
Sbjct: 191 VESTPVAQPVANGVISAVV--PDSPHKIFIGGLPNYLNEDQVKELLLSFGQLRAFNLVKD 248
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
TG SKGY FC Y D ++TD A A LNG+++GDK L V+RA+ + ++
Sbjct: 249 AATGLSKGYAFCEYIDHSITDQAIAGLNGMQLGDKKLIVQRASVGAKNAQN--------- 299
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
H + +Q G++ +G +VLCL +T D L D+EEYE+ILED++E
Sbjct: 300 -NHTTAAPVMIQVPGLSMVG-----ISGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKE 353
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
EC KYG + +V IPRP + G + PG GKVF+E+ + C A+ AL+GRKF V Y
Sbjct: 354 ECNKYGVVRSVEIPRPIE-GVDVPGCGKVFVEFNSVMDCQKAQQALTGRKFSDRVVVTSY 412
Query: 368 YPEDKYFNKDY 378
+ DKY +++
Sbjct: 413 FDPDKYHRREF 423
>gi|357623461|gb|EHJ74600.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Danaus
plexippus]
Length = 350
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 212/362 (58%), Gaps = 27/362 (7%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ FF+Q M + G + G+ V+ I
Sbjct: 16 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSGLAQAAGNPVLACQI 74
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P +N+
Sbjct: 75 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGTENPAINV 128
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
A G+ S + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKGY
Sbjct: 129 PA-GVISTVV--PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGY 185
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
F Y D ++TD A A LNG+++GDK L V+RA+ + + S LA +
Sbjct: 186 AFAEYVDISMTDQAIAGLNGMQLGDKKLIVQRASIGA------KNSTLAMT----GAAPV 235
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
LQ +G+ G G + +VLCL +T D L D+EEYE+ILED++EEC KYG +
Sbjct: 236 TLQVAGLTLAGAGPA------TEVLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGCVR 289
Query: 317 NVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNK 376
++ IPRP + G E PG GKVF+E+ C A+ L+GRKF V Y+ DKY +
Sbjct: 290 SIEIPRPIE-GVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRR 348
Query: 377 DY 378
++
Sbjct: 349 EF 350
>gi|325191172|emb|CCA25959.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 553
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 216/362 (59%), Gaps = 26/362 (7%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q TRHARR+YVGG+ + NE I+ FF+ V+ G G AVV+VYIN E+ FAFVE
Sbjct: 209 QQTRHARRIYVGGIGEV-NETEISAFFNDVIDRALGERQ-EGGAVVSVYINRERHFAFVE 266
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAA-LGPGQPSPNLNLAAVGLASGA 145
++++E + M LDGI F G ++VRRP DYNP L LGP P LNLAA+G+ S
Sbjct: 267 LKSIELTTACMNLDGIAFRGQPLKVRRPNDYNPGLVPKDLGP---IPALNLAALGIVSTT 323
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ +GP +VF+GG+PY+ TE QIKELL++FG L F LVKD T SKGY FC Y D
Sbjct: 324 V--QDGPGKVFIGGIPYHLTEEQIKELLQAFGPLKSFHLVKDLTTNLSKGYAFCEYMDSG 381
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA--------QQHIAIQKMA 257
VTD AC LN +K+GD+TLTVRRA + E ++A A + + + A
Sbjct: 382 VTDAACIGLNDMKLGDRTLTVRRALSQ------ESAKVIANAAGTVNAGVEMGLDPSRAA 435
Query: 258 LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVN 317
+QT M G + G + ++VL L +T + L D++EY +I++D+R EC +YG +
Sbjct: 436 MQTISM--AGVHLGPIG-SPSRVLVLRNMVTPEELEDEDEYRDIMDDIRSECERYGRVTT 492
Query: 318 VVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKD 377
+++PR + G+ +GKV++E+ D A N L GR F V+A Y E ++ ++
Sbjct: 493 IILPRAKEGYGDE-ALGKVYIEFGDISTSQAAANELHGRGFANRVVSAQYMEEAQFERRE 551
Query: 378 YS 379
+
Sbjct: 552 LT 553
>gi|195167317|ref|XP_002024480.1| GL15893 [Drosophila persimilis]
gi|198469588|ref|XP_001355063.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
gi|194107878|gb|EDW29921.1| GL15893 [Drosophila persimilis]
gi|198146942|gb|EAL32119.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/365 (41%), Positives = 213/365 (58%), Gaps = 28/365 (7%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 79 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 137
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG-QPSPNLN 135
N +K FAF+E R+++E + AMA DGI +G ++++RRP DY P PG +P +
Sbjct: 138 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPM------PGITDTPAIK 191
Query: 136 LAAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
A V +SG I + P ++F+GGLP Y + Q+KELL SFG L F+LVKD TG S
Sbjct: 192 PAVV--SSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLS 249
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGY FC Y D ++TD + A LNG+++GDK L V+RA+ + ++ S
Sbjct: 250 KGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNASNS----------S 299
Query: 254 QKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
Q + LQ G++T+ + +VLCL +T D L D+EEYE+ILED++EEC KYG
Sbjct: 300 QSVMLQVPGLSTV-----VSSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYG 354
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ +V IPRP + G E PG GKVF+E+ + C A+ AL+GRKF V Y+ DKY
Sbjct: 355 VVRSVEIPRPIE-GVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKY 413
Query: 374 FNKDY 378
+++
Sbjct: 414 HRREF 418
>gi|156404394|ref|XP_001640392.1| predicted protein [Nematostella vectensis]
gi|156227526|gb|EDO48329.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/351 (42%), Positives = 206/351 (58%), Gaps = 22/351 (6%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
TR ARR+YVG +P E + FF+ M N+A PG+ V+ IN E+ FAF+E+R
Sbjct: 2 TRQARRLYVGNIPFGVTENLMIEFFNAKMKEAKLNTA-PGNPVIAAQINTEQNFAFIELR 60
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+VEE + AMA DGII +G A+++RRP DY P PG S N ++ G+ S +
Sbjct: 61 SVEETTQAMAFDGIILQGQALKIRRPKDYQPI------PGM-SENASVHVPGVVSTVV-- 111
Query: 149 AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD 208
+ P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKGY FC Y D +TD
Sbjct: 112 PDSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITD 171
Query: 209 IACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGG 268
+A LNG+++GDK L V+RA+ + Q+ QA + Q LQ G++
Sbjct: 172 VAIQGLNGMQLGDKKLIVQRASVGAKQNLNN-----PQAMNMVPAQ---LQIPGLDI--- 220
Query: 269 GMSLFGETLA-KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNG 327
M++ G A +VL L +T D L DDEE+EEI +D+REEC KYG + ++ IPRP +
Sbjct: 221 SMAVPGAVAATEVLALMNMVTPDELGDDEEFEEIYDDVREECSKYGRVKSMEIPRPMEGL 280
Query: 328 GETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E PGVGK+F+E+ A AL GRKF V YYP ++Y + +
Sbjct: 281 MEPPGVGKIFVEFSSIDDAKKAAAALGGRKFANRVVVTSYYPPEEYHRRIF 331
>gi|194770152|ref|XP_001967161.1| GF19596 [Drosophila ananassae]
gi|190619281|gb|EDV34805.1| GF19596 [Drosophila ananassae]
Length = 416
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/365 (40%), Positives = 213/365 (58%), Gaps = 28/365 (7%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG-QPSPNLN 135
N +K FAF+E R+++E + AMA DGI +G ++++RRP DY P PG +P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPM------PGITDTPAIK 189
Query: 136 LAAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
A V +SG I + P ++F+GGLP Y + Q+KELL SFG L F+LVKD TG S
Sbjct: 190 PAVV--SSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLS 247
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGY FC Y D ++TD + A LNG+++GDK L V+RA+ + ++ +
Sbjct: 248 KGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNASNT----------T 297
Query: 254 QKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
Q + LQ G++T+ + +VLCL +T D L D+EEYE+ILED++EEC KYG
Sbjct: 298 QSVMLQVPGLSTV-----VTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYG 352
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ +V IPRP + G E PG GKVF+E+ + C A+ AL+GRKF V Y+ DKY
Sbjct: 353 VVRSVEIPRPIE-GVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKY 411
Query: 374 FNKDY 378
+++
Sbjct: 412 HRREF 416
>gi|114052735|ref|NP_001040494.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Bombyx mori]
gi|95103122|gb|ABF51502.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Bombyx mori]
Length = 417
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 211/362 (58%), Gaps = 27/362 (7%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ FF+Q M + G + G+ V+ I
Sbjct: 83 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQM-HLSGLAQAAGNPVLACQI 141
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P +N+
Sbjct: 142 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGTENPAINV 195
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
A G+ S + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKGY
Sbjct: 196 PA-GVISTVV--PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGY 252
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
F Y D ++TD A A LNG+++GDK L V+RA+ + + S LA +
Sbjct: 253 AFAEYVDISMTDQAIAGLNGMQLGDKKLIVQRASIGA------KNSTLALT----GAAPV 302
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
+Q +G+ G G +VLCL +T D L D+EEYE+ILED++EEC KYG +
Sbjct: 303 QIQVAGLTLAGAGPP------TEVLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGVVR 356
Query: 317 NVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNK 376
++ IPRP + G E PG GKVF+E+ C A+ L+GRKF V Y+ DKY +
Sbjct: 357 SIEIPRPIE-GVEVPGCGKVFVEFNSIADCQKAQQTLTGRKFSNRVVVTSYFDPDKYHRR 415
Query: 377 DY 378
++
Sbjct: 416 EF 417
>gi|195448282|ref|XP_002071589.1| GK10063 [Drosophila willistoni]
gi|194167674|gb|EDW82575.1| GK10063 [Drosophila willistoni]
Length = 416
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 149/365 (40%), Positives = 213/365 (58%), Gaps = 28/365 (7%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG-QPSPNLN 135
N +K FAF+E R+++E + AMA DGI +G ++++RRP DY P PG +P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPM------PGITDTPAIK 189
Query: 136 LAAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
A V +SG I + P ++F+GGLP Y + Q+KELL SFG L F+LVKD TG S
Sbjct: 190 PAVV--SSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLS 247
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGY FC Y D ++TD + A LNG+++GDK L V+RA+ + ++ +
Sbjct: 248 KGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANT----------T 297
Query: 254 QKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
Q + LQ G++T+ + +VLCL +T D L D+EEYE+ILED++EEC KYG
Sbjct: 298 QSVMLQVPGLSTV-----VTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYG 352
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ +V IPRP + G E PG GKVF+E+ + C A+ AL+GRKF V Y+ DKY
Sbjct: 353 VVRSVEIPRPIE-GVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKY 411
Query: 374 FNKDY 378
+++
Sbjct: 412 HRREF 416
>gi|386764550|ref|NP_001245709.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
gi|383293439|gb|AFH07422.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
Length = 360
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 212/366 (57%), Gaps = 30/366 (8%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 21 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 79
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG-QPSPNLN 135
N +K FAF+E R+++E + AMA DGI +G ++++RRP DY P PG +P +
Sbjct: 80 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPM------PGITDTPAIK 133
Query: 136 LAAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
A V +SG I + P ++F+GGLP Y + Q+KELL SFG L F+LVKD TG S
Sbjct: 134 PAVV--SSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLS 191
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGY FC Y D ++TD + A LNG+++GDK L V+RA+ + ++ +
Sbjct: 192 KGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANT----------T 241
Query: 254 QKMALQTSGM-NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
Q + LQ G+ N + G +VLCL +T D L D+EEYE+ILED++EEC KY
Sbjct: 242 QSVMLQVPGLSNVVTSGPP------TEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 295
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
G + +V IPRP + G E PG GKVF+E+ + C A+ AL+GRKF V Y+ DK
Sbjct: 296 GVVRSVEIPRPIE-GVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDK 354
Query: 373 YFNKDY 378
Y +++
Sbjct: 355 YHRREF 360
>gi|17136764|ref|NP_476891.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|386764552|ref|NP_001245710.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
gi|195351420|ref|XP_002042232.1| GM13406 [Drosophila sechellia]
gi|195479195|ref|XP_002100800.1| GE15975 [Drosophila yakuba]
gi|195555160|ref|XP_002077042.1| GD24494 [Drosophila simulans]
gi|4033485|sp|Q24562.1|U2AF2_DROME RecName: Full=Splicing factor U2AF 50 kDa subunit; AltName: Full=U2
auxiliary factor 50 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|349761|gb|AAA03548.1| RNA binding protein [Drosophila melanogaster]
gi|7293214|gb|AAF48596.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|17861976|gb|AAL39465.1| LD03714p [Drosophila melanogaster]
gi|194124075|gb|EDW46118.1| GM13406 [Drosophila sechellia]
gi|194188324|gb|EDX01908.1| GE15975 [Drosophila yakuba]
gi|194203060|gb|EDX16636.1| GD24494 [Drosophila simulans]
gi|220943258|gb|ACL84172.1| U2af50-PA [synthetic construct]
gi|220953438|gb|ACL89262.1| U2af50-PA [synthetic construct]
gi|383293440|gb|AFH07423.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
Length = 416
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 212/366 (57%), Gaps = 30/366 (8%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG-QPSPNLN 135
N +K FAF+E R+++E + AMA DGI +G ++++RRP DY P PG +P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPM------PGITDTPAIK 189
Query: 136 LAAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
A V +SG I + P ++F+GGLP Y + Q+KELL SFG L F+LVKD TG S
Sbjct: 190 PAVV--SSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLS 247
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGY FC Y D ++TD + A LNG+++GDK L V+RA+ + ++ +
Sbjct: 248 KGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANT----------T 297
Query: 254 QKMALQTSGM-NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
Q + LQ G+ N + G +VLCL +T D L D+EEYE+ILED++EEC KY
Sbjct: 298 QSVMLQVPGLSNVVTSGPP------TEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 351
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
G + +V IPRP + G E PG GKVF+E+ + C A+ AL+GRKF V Y+ DK
Sbjct: 352 GVVRSVEIPRPIE-GVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDK 410
Query: 373 YFNKDY 378
Y +++
Sbjct: 411 YHRREF 416
>gi|194893848|ref|XP_001977952.1| GG19328 [Drosophila erecta]
gi|190649601|gb|EDV46879.1| GG19328 [Drosophila erecta]
Length = 416
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 212/366 (57%), Gaps = 30/366 (8%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG-QPSPNLN 135
N +K FAF+E R+++E + AMA DGI +G ++++RRP DY P PG +P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPM------PGITDTPAIK 189
Query: 136 LAAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
A V +SG I + P ++F+GGLP Y + Q+KELL SFG L F+LVKD TG S
Sbjct: 190 PAVV--SSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLS 247
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGY FC Y D ++TD + A LNG+++GDK L V+RA+ + ++ +
Sbjct: 248 KGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANT----------T 297
Query: 254 QKMALQTSGM-NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
Q + LQ G+ N + G +VLCL +T D L D+EEYE+ILED++EEC KY
Sbjct: 298 QSVMLQVPGLSNVVTSGPP------TEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 351
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
G + +V IPRP + G E PG GKVF+E+ + C A+ AL+GRKF V Y+ DK
Sbjct: 352 GVVRSVEIPRPIE-GVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDK 410
Query: 373 YFNKDY 378
Y +++
Sbjct: 411 YHRREF 416
>gi|386764548|ref|NP_001245708.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
gi|383293438|gb|AFH07421.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
Length = 427
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 212/366 (57%), Gaps = 30/366 (8%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 88 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 146
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG-QPSPNLN 135
N +K FAF+E R+++E + AMA DGI +G ++++RRP DY P PG +P +
Sbjct: 147 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPM------PGITDTPAIK 200
Query: 136 LAAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
A V +SG I + P ++F+GGLP Y + Q+KELL SFG L F+LVKD TG S
Sbjct: 201 PAVV--SSGVISTVVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLS 258
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGY FC Y D ++TD + A LNG+++GDK L V+RA+ + ++ +
Sbjct: 259 KGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANT----------T 308
Query: 254 QKMALQTSGM-NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
Q + LQ G+ N + G +VLCL +T D L D+EEYE+ILED++EEC KY
Sbjct: 309 QSVMLQVPGLSNVVTSGPP------TEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKY 362
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
G + +V IPRP + G E PG GKVF+E+ + C A+ AL+GRKF V Y+ DK
Sbjct: 363 GVVRSVEIPRPIE-GVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDK 421
Query: 373 YFNKDY 378
Y +++
Sbjct: 422 YHRREF 427
>gi|291241059|ref|XP_002740425.1| PREDICTED: U2 (RNU2) small nuclear RNA auxiliary factor 2-like
[Saccoglossus kowalevskii]
Length = 466
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 214/356 (60%), Gaps = 19/356 (5%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
++ Q TR ARR+YVG +P E+A+ FF++ M + A G+ V+ V I+ K F
Sbjct: 130 IVGSQMTRQARRLYVGNIPFGVTEEAMMDFFNRQMKSFRITQAQ-GNPVLAVQIDLNKNF 188
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
AF+E R+V+E + AMA DGI+F+G ++++RRP DY P A P P+ + G+
Sbjct: 189 AFLEFRSVDETTQAMAFDGILFQGQSLKIRRPKDYQPVPGMAEMPSVHVPDYLFSPTGVV 248
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
S + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD T SKGY FC Y
Sbjct: 249 STVV--PDSPHKIFIGGLPNYLNEDQVKELLTSFGELKAFNLVKDSATSLSKGYAFCEYI 306
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
D +TD A A LNG+++GDK L V+RA+ + ++T Q I ++ +Q G
Sbjct: 307 DEKITDQAIAGLNGMQLGDKKLIVQRASVGAKNAQTAQ-----------MIAQLNIQVPG 355
Query: 263 MNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPR 322
+N G L G T +VLCL +T D L D+EEYEEIL+D+R+ECGKYG + ++ IPR
Sbjct: 356 VNI---GQGLVGPT-TEVLCLMNMVTPDELQDEEEYEEILDDVRQECGKYGQVRSLEIPR 411
Query: 323 PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
P + G E PG GK+F+E+ + + A+ AL+GRKF V + DKY +++
Sbjct: 412 PIE-GVEVPGCGKIFVEFTNVLESQKAQTALAGRKFNNRIVVTSFCDPDKYHRREF 466
>gi|255089803|ref|XP_002506823.1| predicted protein [Micromonas sp. RCC299]
gi|226522096|gb|ACO68081.1| predicted protein [Micromonas sp. RCC299]
Length = 554
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 211/356 (59%), Gaps = 24/356 (6%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAG--PGD---AVVNVYINHEKK 81
QATRHARRVYVGG P NE +A+F + + AIGG S P + V++VYIN +K
Sbjct: 212 QATRHARRVYVGGFPDNTNEPELASFIANALVAIGGASGAYDPDNGMTCVLSVYINRDKL 271
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
FAFVE RTVEEASNAMALDG++ G +RVRRP DY P AA +GP P+ +LNLAAVGL
Sbjct: 272 FAFVEFRTVEEASNAMALDGVVMAGSQLRVRRPNDYQPQQAALIGPTTPADSLNLAAVGL 331
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
G G + G +++VG LP Y TE Q+ ELL+SFG + F+LV D+DTG KGYGF Y
Sbjct: 332 IPGVNGQSSG-RKLYVGNLPPYLTELQVLELLQSFGAVQAFNLVVDKDTGTLKGYGFFEY 390
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D A + A L G+++GDK L V+RA G + ++ + Q
Sbjct: 391 ADAAADEAAMEGLTGMRLGDKVLNVKRAAYDGGVGQGVGQA------------SGSAQAP 438
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
G G + GE+ ++ + LT +T + L D E EILED +EEC +G L VV+P
Sbjct: 439 GFAP--GSLPANGESASECVRLTNMVTREELTDPTEAREILEDTQEECAGFGELTRVVMP 496
Query: 322 RPDQNGGETP-GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE---DKY 373
P + E P GVG+VFL + DA G A A +L+GRKF V+A + DKY
Sbjct: 497 LPRRTRLEDPAGVGEVFLLFADAEGAARAVRSLNGRKFADRVVSAGFITRAEFDKY 552
>gi|195042782|ref|XP_001991497.1| GH12033 [Drosophila grimshawi]
gi|195134983|ref|XP_002011915.1| GI14308 [Drosophila mojavensis]
gi|193901255|gb|EDW00122.1| GH12033 [Drosophila grimshawi]
gi|193909169|gb|EDW08036.1| GI14308 [Drosophila mojavensis]
Length = 416
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/365 (40%), Positives = 212/365 (58%), Gaps = 28/365 (7%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG-QPSPNLN 135
N +K FAF+E R+++E + AMA DGI +G +++RRP DY P PG +P +
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQDLKIRRPHDYQPM------PGITDTPAVK 189
Query: 136 LAAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
A V +SG I + P ++F+GGLP Y + Q+KELL SFG L F+LVKD TG S
Sbjct: 190 PAVV--SSGVISTVVPDSPHKIFIGGLPNYLNDEQVKELLLSFGKLRAFNLVKDAATGLS 247
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGY FC Y D ++TD + A LNG+++GDK L V+RA+ + ++ +
Sbjct: 248 KGYAFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANT----------S 297
Query: 254 QKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
Q + LQ G++T+ + +VLCL +T D L D+EEYE+ILED++EEC KYG
Sbjct: 298 QSVMLQVPGLSTV-----VTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYG 352
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ +V IPRP + G E PG GKVF+E+ + C A+ AL+GRKF V Y+ DKY
Sbjct: 353 VVRSVEIPRPIE-GVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKY 411
Query: 374 FNKDY 378
+++
Sbjct: 412 HRREF 416
>gi|62859443|ref|NP_001016998.1| U2 small nuclear RNA auxiliary factor 2 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|89269799|emb|CAJ83531.1| U2 (RNU2) small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
gi|115292148|gb|AAI22001.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
Length = 465
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 214/368 (58%), Gaps = 33/368 (8%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 179
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 232
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQI---------KELLESFGTLHGFDLVKDRDT 190
G+ S + + ++F+GGLP Y + Q+ KELL SFG L F+LVKD T
Sbjct: 233 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVTMESLSLWVKELLTSFGPLKAFNLVKDSAT 290
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
G SKGY FC Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q
Sbjct: 291 GLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTP 345
Query: 251 IAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECG 310
+ +Q L +S + +GG + +VLCL + + L DD+EYEEI+ED+R+ECG
Sbjct: 346 VTLQVPGLMSSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDDEYEEIVEDVRDECG 397
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
KYG + ++ IPRP +G E PG GK+F+E+ C A L+GRKF V Y
Sbjct: 398 KYGAVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDP 456
Query: 371 DKYFNKDY 378
D Y +D+
Sbjct: 457 DGYHRRDF 464
>gi|410903109|ref|XP_003965036.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 4
[Takifugu rubripes]
Length = 455
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 210/368 (57%), Gaps = 37/368 (10%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ Q TR ARR+YVG +P E+++A FF+ M + G S P + V+ V IN +K
Sbjct: 115 VPVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMR-LAGLSQAPSNPVLAVQINQDK 173
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P + P P G
Sbjct: 174 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPVFHVP-------G 226
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQI---------KELLESFGTLHGFDLVKDRDTG 191
+ S + + P ++F+GGLP Y + Q+ KELL SFG L F+LVKD T
Sbjct: 227 VVSTVV--PDSPHKLFIGGLPNYLNDDQVLIRRLGWRVKELLTSFGPLKAFNLVKDSATS 284
Query: 192 NSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI 251
SKGY FC Y D + TD A A LNG+++GDK L V+RA+ +K S + +A +
Sbjct: 285 LSKGYAFCEYVDVSATDQAVAGLNGMQLGDKKLIVQRASVG---AKNANPSAIIEAPVTL 341
Query: 252 AIQKMA-LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECG 310
+ + LQ SGM T +VLCL + + L DD++YEEILED+REEC
Sbjct: 342 QVPGLQRLQNSGMPT-------------EVLCLLNMVMPEELVDDDDYEEILEDVREECC 388
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
KYG++ ++ IPRP +G + PG GK+F+EY A C A AL+GRKF V YY
Sbjct: 389 KYGSVRSIEIPRP-VDGVDVPGCGKIFVEYVSASDCQKAMQALTGRKFANRVVVTKYYDL 447
Query: 371 DKYFNKDY 378
D Y ++
Sbjct: 448 DLYHRHEF 455
>gi|91088649|ref|XP_974465.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor 2 [Tribolium castaneum]
Length = 450
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 207/364 (56%), Gaps = 34/364 (9%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 119 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 177
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY QP P +
Sbjct: 178 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QPMPGMAE 226
Query: 137 AAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK 194
+++ + +G I + P ++F+GGLP Y E Q+KELL SFG L F+LVKD G SK
Sbjct: 227 SSISVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDTAFGLSK 286
Query: 195 GYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQ 254
GY F Y D +TD A A LNG+++GDK L V+RA+ A+ I
Sbjct: 287 GYAFAEYIDITMTDQAIAGLNGMQLGDKRLIVQRASVG--------------AKNATVIP 332
Query: 255 KMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
+ +Q G++ +G +VLCL +T D L D+EEYE+ILED++EEC KYG
Sbjct: 333 AVQIQVPGLSLVGA-----SGPPTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGV 387
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ ++ IPRP +G E PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 388 VRSIEIPRP-IDGVEVPGCGKVFVEFNSVLDCQKAQQTLTGRKFSNRVVVTSYFDPDKYH 446
Query: 375 NKDY 378
+++
Sbjct: 447 RREF 450
>gi|270011684|gb|EFA08132.1| hypothetical protein TcasGA2_TC005736 [Tribolium castaneum]
Length = 432
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 207/364 (56%), Gaps = 34/364 (9%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 101 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 159
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY QP P +
Sbjct: 160 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QPMPGMAE 208
Query: 137 AAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK 194
+++ + +G I + P ++F+GGLP Y E Q+KELL SFG L F+LVKD G SK
Sbjct: 209 SSISVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDTAFGLSK 268
Query: 195 GYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQ 254
GY F Y D +TD A A LNG+++GDK L V+RA+ A+ I
Sbjct: 269 GYAFAEYIDITMTDQAIAGLNGMQLGDKRLIVQRASVG--------------AKNATVIP 314
Query: 255 KMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
+ +Q G++ +G +VLCL +T D L D+EEYE+ILED++EEC KYG
Sbjct: 315 AVQIQVPGLSLVGA-----SGPPTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGV 369
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ ++ IPRP +G E PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 370 VRSIEIPRP-IDGVEVPGCGKVFVEFNSVLDCQKAQQTLTGRKFSNRVVVTSYFDPDKYH 428
Query: 375 NKDY 378
+++
Sbjct: 429 RREF 432
>gi|242019185|ref|XP_002430045.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
gi|212515110|gb|EEB17307.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
Length = 445
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 213/363 (58%), Gaps = 29/363 (7%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 111 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 169
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P++N
Sbjct: 170 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGMSENPSVN 223
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ A G+ S + + P ++F+GGLP Y E Q+KELL SFG L F+LV D TG SKG
Sbjct: 224 VPA-GVISTVV--PDSPHKIFIGGLPNYLNEDQLKELLMSFGQLRAFNLVMDSTTGLSKG 280
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC++ D VTD A A LNG+++GDK L V+RA+ + + Q++
Sbjct: 281 YAFCLFVDINVTDQAIAGLNGMQLGDKKLIVQRASVGAKNTALGQQA------------P 328
Query: 256 MALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL 315
+ +Q G+ ++G +VLCL +T L D+EEYE+ILED++EEC K+G +
Sbjct: 329 VQIQVPGLTSVG-----MSGPPTEVLCLLNMVTPSELNDEEEYEDILEDIKEECNKHGVV 383
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ IPRP G + PG GKVF+E+ + C A+ AL+GRKF V Y+ DKY
Sbjct: 384 KSLEIPRPIL-GVDVPGCGKVFVEFNSVLDCQKAQQALTGRKFNHRVVVTSYFDPDKYHR 442
Query: 376 KDY 378
+++
Sbjct: 443 REF 445
>gi|45387787|ref|NP_991252.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
gi|41389016|gb|AAH65869.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
Length = 475
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 209/359 (58%), Gaps = 23/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 139 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 197
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+ ++++RRP DY P PG S N ++
Sbjct: 198 KNFAFLEFRSVDETTQAMAFDGIIFQAQSLKIRRPHDYQPL------PGM-SENPSVYVP 250
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 251 GVVSTVV--PDSIHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 308
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D V D A A LNG+++ DK L V+RA+ + + ++ + + + +Q L
Sbjct: 309 EYVDVNVNDQAIAGLNGMQLADKKLLVQRASVGAKNA-----TMTSINETPVTLQVPGLT 363
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
++ M +GG +VLCL + + L DDEEYEEI+ED++EEC KYG + ++
Sbjct: 364 SNPMIQMGG-------IPTEVLCLMNMVAPEELIDDEEYEEIVEDVKEECSKYGQVKSIE 416
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G + PG GK+F+E+ A L+GRKF V Y D Y +D+
Sbjct: 417 IPRP-VDGLDIPGTGKIFVEFTSVYDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 474
>gi|328721670|ref|XP_001951521.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 416
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 202/362 (55%), Gaps = 29/362 (8%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E + FF+Q M + G + G+ V+ I
Sbjct: 84 PQTAVPVVGSTITRQARRLYVGNIPFGVTEDEMMEFFNQQM-HLSGLAQAAGNPVLACQI 142
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY PT + P N N
Sbjct: 143 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPT--PGMTESNPVTNYN- 199
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
SG P ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY
Sbjct: 200 ------SGMTLDMNSPHKIFIGGLPAYLNDEQVKELLTSFGQLKAFNLVKDAATGLSKGY 253
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
FC Y D +TD A A LNG+++G+K L V+RA+ + Q +
Sbjct: 254 AFCEYADVVMTDQAIAGLNGMQLGEKKLIVQRASIGAKNPGLGQVPV------------- 300
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
+Q G+ +G +VLCL +T D L D+EEYE+ILED+REEC KYG +
Sbjct: 301 TIQVPGLTVVGT-----AGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVR 355
Query: 317 NVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNK 376
++ IPRP + G + PG GKVF+E+ V C A+ AL+GRKF V + DKY +
Sbjct: 356 SLEIPRPIE-GIDVPGCGKVFIEFNAIVDCQKAQQALAGRKFNNRVVVTSFMEPDKYHRR 414
Query: 377 DY 378
++
Sbjct: 415 EF 416
>gi|347968827|ref|XP_311994.4| AGAP002908-PA [Anopheles gambiae str. PEST]
gi|333467820|gb|EAA08228.4| AGAP002908-PA [Anopheles gambiae str. PEST]
Length = 446
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/369 (40%), Positives = 210/369 (56%), Gaps = 38/369 (10%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 109 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNPVLACQI 167
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA D I F+G ++++RRP DY P PG +
Sbjct: 168 NLDKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDYQPM------PGM----TDS 217
Query: 137 AAVGLA---SGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTG 191
AAV + SG I + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG
Sbjct: 218 AAVNVPEKFSGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATG 277
Query: 192 NSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI 251
KGY F Y + VTD A A LNG+++GDK L V+RA+ +K +++A Q +
Sbjct: 278 LGKGYAFAEYVEYTVTDQAIAGLNGMQLGDKKLIVQRASVG---AKNSNAAVVAPVQIQV 334
Query: 252 AIQKMALQTSGMNTLGGGMSLFGET--LAKVLCLTEAITADALADDEEYEEILEDMREEC 309
G+SL G + +VLCL +T D L D+EEYE+ILED+REEC
Sbjct: 335 P----------------GLSLVGSSGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREEC 378
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
KYG + +V IPRP + G + PG GKVF+E+ V C A+ AL+GRKF V Y+
Sbjct: 379 NKYGVVRSVEIPRPIE-GVDVPGCGKVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFD 437
Query: 370 EDKYFNKDY 378
DKY +++
Sbjct: 438 PDKYHRREF 446
>gi|195999450|ref|XP_002109593.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
gi|190587717|gb|EDV27759.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
Length = 476
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 208/352 (59%), Gaps = 23/352 (6%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q TR +RR+YVG +P EQA+ FF++ M G A GD V+ V IN +K FAF+E
Sbjct: 148 QITRQSRRLYVGNIPFGITEQAMMDFFNEKMVTTGLTQAN-GDPVLAVQINFDKNFAFLE 206
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
R++EE +NAMA DGI+F+ A+++RRP DY P G P+ + N+ G+ S +
Sbjct: 207 FRSIEETTNAMAFDGIMFQNQALKIRRPKDYQPPT------GDPNSSANIHVPGVISTVV 260
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
+ P ++F+GGLP Y TE Q+KELL+SFG L F+LVKD TG SKGY FC Y V
Sbjct: 261 --PDTPHKLFIGGLPNYLTEDQVKELLQSFGELKAFNLVKDSATGLSKGYAFCEYVVVEV 318
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
TD A A LN +++G+K L V+RA+ + + S+ + + +Q LQ S N L
Sbjct: 319 TDQAIAGLNNMQLGEKKLVVQRASVGAKHNY----SVRCLSGIPVTVQVPGLQISN-NAL 373
Query: 267 GGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN 326
G + ++L L +T + L DDEEYE+I+ED+R E K + ++ IPRP +
Sbjct: 374 G--------EVTEILQLMNMVTEEELVDDEEYEDIIEDVRAEVSKIAPVKSLEIPRPIE- 424
Query: 327 GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
G + GVGK+++E+++ C A+ +L+GRKF V +YP + Y + +
Sbjct: 425 GVDVAGVGKIYIEFHNLDDCLKAQQSLAGRKFANRVVMTSFYPPESYHMRQF 476
>gi|391337926|ref|XP_003743315.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Metaseiulus
occidentalis]
Length = 430
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 203/356 (57%), Gaps = 28/356 (7%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V+ TR ARR+YVG +P EQ + +F+ M A A G+ V+ IN +K F
Sbjct: 103 VIGSTITRQARRLYVGNIPFGCTEQEMIDYFNVQMHACAFAQAQ-GNPVLACQINMDKNF 161
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
AF+E R+++E S AM+ DGI F+G ++++RRP DY P + G P G+
Sbjct: 162 AFLEFRSIDETSAAMSFDGINFKGQSLKIRRPHDYQPMPGMSESQGSVIP-------GVV 214
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
S + + P +VF+GGLP Y E Q++ELL SFG L F+LVKD TG SKGY FC Y
Sbjct: 215 STVV--QDSPHKVFIGGLPNYLNEDQVRELLMSFGQLKAFNLVKDTATGLSKGYAFCEYA 272
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
+ +TD A A LNG+++GDK L V+RA+ + S + +Q +Q G
Sbjct: 273 EVTITDDAIAGLNGMQLGDKKLIVQRASVGAKNSNMA-----------VPVQ---IQVPG 318
Query: 263 MNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPR 322
M + G S +VLCL +T D L D+EEY++ILED+++EC KYG + ++ IPR
Sbjct: 319 MPNVPIGSS---GPATEVLCLMNLVTPDELRDEEEYDDILEDIQDECNKYGHVKSIEIPR 375
Query: 323 PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
P Q G + PGVGKVF+E+ C A+ AL+GRKF V Y+ DKY + +
Sbjct: 376 PIQ-GVDVPGVGKVFVEFNSVADCQKAQQALTGRKFSNRVVVTSYFEPDKYHRRQF 430
>gi|328721668|ref|XP_003247369.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Acyrthosiphon pisum]
Length = 451
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 206/369 (55%), Gaps = 29/369 (7%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E + FF+Q M + G + G+ V+ I
Sbjct: 105 PQTAVPVVGSTITRQARRLYVGNIPFGVTEDEMMEFFNQQM-HLSGLAQAAGNPVLACQI 163
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLN- 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY PT + P N N
Sbjct: 164 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPT--PGMTESNPVTNYNS 221
Query: 136 ---LAAVGLASGAIGGAEGPD---RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRD 189
L + S + G PD ++F+GGLP Y + Q+KELL SFG L F+LVKD
Sbjct: 222 GMTLDMMKYDSSSFGLGTVPDSPHKIFIGGLPAYLNDEQVKELLTSFGQLKAFNLVKDAA 281
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ 249
TG SKGY FC Y D +TD A A LNG+++G+K L V+RA+ + Q +
Sbjct: 282 TGLSKGYAFCEYADVVMTDQAIAGLNGMQLGEKKLIVQRASIGAKNPGLGQVPV------ 335
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
+Q G+ +G +VLCL +T D L D+EEYE+ILED+REEC
Sbjct: 336 -------TIQVPGLTVVGTAGP-----PTEVLCLLNMVTPDELKDEEEYEDILEDIREEC 383
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
KYG + ++ IPRP + G + PG GKVF+E+ V C A+ AL+GRKF V +
Sbjct: 384 NKYGVVRSLEIPRPIE-GIDVPGCGKVFIEFNAIVDCQKAQQALAGRKFNNRVVVTSFME 442
Query: 370 EDKYFNKDY 378
DKY +++
Sbjct: 443 PDKYHRREF 451
>gi|260800970|ref|XP_002595369.1| hypothetical protein BRAFLDRAFT_113856 [Branchiostoma floridae]
gi|229280615|gb|EEN51381.1| hypothetical protein BRAFLDRAFT_113856 [Branchiostoma floridae]
Length = 524
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 204/352 (57%), Gaps = 24/352 (6%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q TR ARR+YVG +P E+A+ FF+ M A PG+ V+ +N +K FAF+E
Sbjct: 196 QMTRQARRLYVGNIPFGVTEEAMIDFFNTQMHRASLAQA-PGNPVLACQVNLDKNFAFLE 254
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
R+V+E + AMA DGIIF+G ++++RRP DY P A P P G+ S +
Sbjct: 255 FRSVDETTLAMAFDGIIFQGQSLKLRRPHDYQPVPGMAENPDIHVPGGFPVIPGVVSTVV 314
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
+ P ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY FC Y DP V
Sbjct: 315 --QDSPHKIFIGGLPNYLNDDQVKELLLSFGQLKAFNLVKDSSTALSKGYAFCEYVDPNV 372
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
TD A A LNG+++GDK L V+RA+ + ++ Q + LQ G+
Sbjct: 373 TDQAIAGLNGMQLGDKKLIVQRASVGAKNAQN---------------QPVQLQIPGLTLT 417
Query: 267 GGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN 326
G +VLCL + + L D+EEYE+ILED+REECGKYG +++V IPRP +
Sbjct: 418 GN-----AGPPTEVLCLMNMVMPEELMDEEEYEDILEDVREECGKYGAVLSVEIPRPIE- 471
Query: 327 GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
G + PG GK+++E+ + C A+ AL+GRKF V YY DKY +D+
Sbjct: 472 GVDVPGCGKIYVEFRSIMDCQKAQQALTGRKFAQRIVVTSYYDPDKYHRRDF 523
>gi|170054347|ref|XP_001863087.1| splicing factor u2af large subunit [Culex quinquefasciatus]
gi|167874693|gb|EDS38076.1| splicing factor u2af large subunit [Culex quinquefasciatus]
Length = 438
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 208/368 (56%), Gaps = 36/368 (9%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 101 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNPVLACQI 159
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY QP P +
Sbjct: 160 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QPMPGMTD 208
Query: 137 AAVGLASGAIGGA------EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+AV G + P ++F+GGLP Y E Q+KELL SFG L F+LVKD T
Sbjct: 209 SAVAPVQEKFSGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAAT 268
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
G SKGY F Y + ++TD A A LNG+++GDK L V+RA S+ A+
Sbjct: 269 GLSKGYAFAEYVEYSITDQAIAGLNGMQLGDKKLIVQRA------------SVGAKNANV 316
Query: 251 IAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECG 310
A+ + +Q G++ +G +VLCL +T D L D+EEYE+ILED++EEC
Sbjct: 317 AAVAPVQIQVPGLSLVGS-----SGPPTEVLCLLNMVTPDELKDEEEYEDILEDIKEECN 371
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
KYG + + IPRP + G + PG GKVF+E+ V C A+ AL+GRKF V Y+
Sbjct: 372 KYGVVRSAEIPRPIE-GVDVPGCGKVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFDP 430
Query: 371 DKYFNKDY 378
DKY +++
Sbjct: 431 DKYHRREF 438
>gi|157132061|ref|XP_001662443.1| splicing factor u2af large subunit [Aedes aegypti]
gi|108881728|gb|EAT45953.1| AAEL002818-PA [Aedes aegypti]
Length = 418
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 212/368 (57%), Gaps = 36/368 (9%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 81 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 139
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNL-N 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY QP P + +
Sbjct: 140 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QPMPGMTD 188
Query: 136 LAAVGLA---SGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
AAV + SG I + P ++F+GGLP Y E Q+KELL SFG L F+LVKD T
Sbjct: 189 SAAVSVPEKFSGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAAT 248
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
G SKGY F Y + +TD A A LNG+++GDK L V+RA S+ A+
Sbjct: 249 GLSKGYAFAEYVEYTITDQAIAGLNGMQLGDKKLIVQRA------------SVGAKNANV 296
Query: 251 IAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECG 310
A+ + +Q G++ +G +VLCL +T D L D+EEYE+ILED++EEC
Sbjct: 297 AAVAPVQIQVPGLSLVGS-----SGPPTEVLCLLNMVTPDELKDEEEYEDILEDIKEECN 351
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
KYG + +V IPRP + G + PG GKVF+E+ V C A+ AL+GRKF V Y+
Sbjct: 352 KYGVVRSVEIPRPIE-GVDVPGCGKVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFDP 410
Query: 371 DKYFNKDY 378
DKY +++
Sbjct: 411 DKYHRREF 418
>gi|193629757|ref|XP_001950852.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Acyrthosiphon
pisum]
Length = 446
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 208/369 (56%), Gaps = 29/369 (7%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E + FF+Q M + G + G+ V+ I
Sbjct: 100 PQTAVPVVGSTITRQARRLYVGNIPFGVTEDEMMEFFNQQM-HLSGLAQAAGNPVLACQI 158
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLN- 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY PT + P N N
Sbjct: 159 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPT--PGMTESNPVTNYNS 216
Query: 136 ---LAAVGLASGAIGGAEGPD---RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRD 189
L + S + G PD ++F+GGLP Y + Q+KELL SFG L F+LVKD
Sbjct: 217 GMTLDMMKYDSSSFGLGTVPDSPHKIFIGGLPAYLNDEQVKELLTSFGQLKAFNLVKDAA 276
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ 249
TG SKGY FC Y D +TD A A LNG+++G+K L V+RA+ + + L QA
Sbjct: 277 TGLSKGYAFCEYADVVMTDQAIAGLNGMQLGEKKLIVQRASIGA------KNPGLGQA-- 328
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
+ +Q G+ +G +VLCL +T D L D+EEYE+ILED+REEC
Sbjct: 329 -----PVTIQVPGLTVVGT-----AGPPTEVLCLLNMVTPDELKDEEEYEDILEDIREEC 378
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
KYG + ++ IPRP + G + PG GKVF+E+ C A+ AL+GRKF V +
Sbjct: 379 NKYGVVRSLEIPRPIE-GIDVPGCGKVFIEFNAIPDCQKAQQALAGRKFNNRVVVTSFME 437
Query: 370 EDKYFNKDY 378
DKY +++
Sbjct: 438 PDKYHRREF 446
>gi|115496604|ref|NP_001068804.1| splicing factor U2AF 65 kDa subunit [Bos taurus]
gi|89994093|gb|AAI14161.1| U2 small nuclear RNA auxiliary factor 2 [Bos taurus]
gi|296477253|tpg|DAA19368.1| TPA: U2 (RNU2) small nuclear RNA auxiliary factor 2 [Bos taurus]
Length = 475
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 211/359 (58%), Gaps = 20/359 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSPLSTINQTPVTLQ 359
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+ED+R+ECGKYG + ++
Sbjct: 360 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSIE 416
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 417 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|390341852|ref|XP_792919.3| PREDICTED: splicing factor U2AF 50 kDa subunit-like
[Strongylocentrotus purpuratus]
Length = 386
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 216/363 (59%), Gaps = 44/363 (12%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q TR ARR+YVG +P E A+ FF+ M +G A PG V+ V +NH+K FAF+E
Sbjct: 57 QMTRQARRLYVGNIPFGVTEDAMVEFFNGKMHNVGLAQA-PGPPVLAVQVNHDKNFAFLE 115
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYN--PTLAAALGPGQPSPNLNLAAVGLASG 144
R+VEE + AMA DGI+F+ A+++RRP DY P ++A +P +++ G+ S
Sbjct: 116 FRSVEETTQAMAFDGILFQNQALKIRRPKDYQAIPGMSA-------TPTVHVP--GVVST 166
Query: 145 AIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDP 204
+ + P+++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY FC Y +
Sbjct: 167 VV--QDSPNKIFIGGLPNYLNDDQVKELLSSFGPLKAFNLVKDSATSLSKGYAFCEYVET 224
Query: 205 AVTDI-------ACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ-HIAIQKM 256
+TD+ A A LNG+++G+K L V+RA+ + ++ + Q QQ I I +
Sbjct: 225 NLTDLGWETTDKAIAGLNGMQLGEKKLIVQRASVGA-------KNAMNQGQQVQINIPGL 277
Query: 257 ALQ-TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL 315
+L T+G NT ++LCL +T + L DDEEY++I+ED++EEC KYG +
Sbjct: 278 SLPGTTGPNT-------------EILCLMNMVTPEELKDDEEYDDIVEDVKEECQKYGQV 324
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ IPRP G + PG GK+++E+ + A+ AL+GRKF TV +Y DKY
Sbjct: 325 RSLEIPRPIP-GLDVPGCGKIYVEFMTVMDAQAAQRALAGRKFANRTVVTSFYDVDKYHR 383
Query: 376 KDY 378
+++
Sbjct: 384 REF 386
>gi|303283510|ref|XP_003061046.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457397|gb|EEH54696.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 378
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 211/367 (57%), Gaps = 27/367 (7%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
QATRHARRVYVG L ++ + FF ++M A G G VV+ YIN EK FAF+E
Sbjct: 19 QATRHARRVYVGALTADVDDAHLTQFFEEIMLATGATKRVDGGCVVSTYINREKLFAFIE 78
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS--- 143
+TVEEASNA+ DG+++ G +R+RRP DYN A+ LGP QP+PNLN +A+G+
Sbjct: 79 FQTVEEASNALGFDGVVYGGQQLRLRRPNDYNIAQASLLGPQQPNPNLNYSAIGINHTPT 138
Query: 144 ---GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ + P ++FVGGLP Y TE Q+KEL+ SFG + F+LV D+DTG SKGY F
Sbjct: 139 PMVASTENSTSPYKLFVGGLPNYITENQVKELVCSFGEIKAFNLVFDKDTGLSKGYAFWE 198
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATA---------SSGQSKTEQESILAQAQQHI 251
+ DP+V++ A L+G+++G+K + V+ A ++G+ T S +A QQ
Sbjct: 199 FLDPSVSEAAIKGLDGMRLGEKLINVKFANGNPPPIGGYNAAGEDGT---STVAAQQQLG 255
Query: 252 AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
+ + L T+ L GG+ + L ++ + LAD E EILED EEC
Sbjct: 256 YVANVPLATA--TALTGGVE------TTCVRLKGMVSREELADPTEAAEILEDTEEECKG 307
Query: 312 YGTLVNVVIPRPDQNGGETP-GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
+G+LV V++PRP + P GVG+V L++ A+ +L+GRKF V A + E
Sbjct: 308 FGSLVKVLMPRPGPHPDLDPVGVGEVMLKFATVECARRAQRSLNGRKFADRLVGAVFVKE 367
Query: 371 DKYFNKD 377
+ +D
Sbjct: 368 SVFDERD 374
>gi|340373805|ref|XP_003385430.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Amphimedon
queenslandica]
Length = 529
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 200/354 (56%), Gaps = 23/354 (6%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q TR ARR+Y+G +P E+ + FF++ M SA PG V+ V IN +K FAF+E
Sbjct: 198 QLTRQARRLYIGNIPFGIAEEVMVNFFNEKMLEAKLCSA-PGIPVLAVQINMDKNFAFIE 256
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
R+VEE +NAMA DGI+ +G ++++RRP DY P + P G+ S +
Sbjct: 257 FRSVEETTNAMAFDGIVLQGQSLKIRRPKDYAPIPGVDIMPKH--------VPGVISTVV 308
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
+GP +VF GGLP Y ++ Q+KELL SFG L F+LVKD T SKGY F Y D V
Sbjct: 309 --PDGPHKVFCGGLPTYLSDDQVKELLSSFGDLKAFNLVKDSGTSFSKGYCFFEYLDTDV 366
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
TD A LNG+ +GDK L V+RA+ + ++ + I MA+ S
Sbjct: 367 TDGAIQGLNGMALGDKKLVVQRASVGA--------KVMEEYDISTDITSMAMPIS---IP 415
Query: 267 GGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN 326
G M +T VLCL T + L DD+EYE ILED+REEC YG +++V PRP +
Sbjct: 416 GLQMPSTAQTATTVLCLMNMTTEEELRDDDEYEGILEDVREECSNYGQVLSVAAPRPVE- 474
Query: 327 GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYSA 380
G PG+GK+F+E+ C A+ AL+GRKF V ++ +KY K+++A
Sbjct: 475 GTLVPGLGKIFVEFAATDQCQRAQTALAGRKFANRVVVTSFFDLEKYRQKNFAA 528
>gi|197692223|dbj|BAG70075.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
gi|197692475|dbj|BAG70201.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
Length = 471
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 214/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S NL++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENLSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 360
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 361 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 412
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 413 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|297277970|ref|XP_001091568.2| PREDICTED: splicing factor U2AF 65 kDa subunit [Macaca mulatta]
Length = 471
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 210/359 (58%), Gaps = 20/359 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 132 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 190
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 191 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 243
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 244 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 301
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 302 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSPPSTINQTPVTLQ 355
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 356 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 412
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 413 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=large
Length = 475
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 210/359 (58%), Gaps = 20/359 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSPPSTINQTPVTLQ 359
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 360 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 416
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 417 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|6005926|ref|NP_009210.1| splicing factor U2AF 65 kDa subunit isoform a [Homo sapiens]
gi|267188|sp|P26368.4|U2AF2_HUMAN RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=hU2AF(65);
Short=hU2AF65; AltName: Full=U2 snRNP auxiliary factor
large subunit
gi|37545|emb|CAA45409.1| splicing factor U2AF [Homo sapiens]
gi|380783065|gb|AFE63408.1| splicing factor U2AF 65 kDa subunit isoform a [Macaca mulatta]
gi|410212804|gb|JAA03621.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260574|gb|JAA18253.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291504|gb|JAA24352.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 210/359 (58%), Gaps = 20/359 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSPPSTINQTPVTLQ 359
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 360 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 416
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 417 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|327365322|ref|NP_001192160.1| splicing factor U2AF 65 kDa subunit isoform 1 [Mus musculus]
gi|348551789|ref|XP_003461711.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 2 [Cavia
porcellus]
gi|392343893|ref|XP_003748811.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Rattus norvegicus]
gi|136628|sp|P26369.3|U2AF2_MOUSE RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|55101|emb|CAA45874.1| splicing factor U2AF [Mus musculus]
gi|26347321|dbj|BAC37309.1| unnamed protein product [Mus musculus]
Length = 475
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 210/359 (58%), Gaps = 20/359 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSLPSTINQTPVTLQ 359
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 360 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 416
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 417 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|410351437|gb|JAA42322.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 210/359 (58%), Gaps = 20/359 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSPPSTINQTPVTLQ 359
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 360 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 416
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 417 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|1334149|emb|CAA45875.1| unnamed protein product [Mus musculus]
Length = 492
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 210/359 (58%), Gaps = 20/359 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 153 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 211
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 212 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 264
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 265 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 322
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 323 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSLPSTINQTPVTLQ 376
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 377 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 433
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 434 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 491
>gi|327280715|ref|XP_003225097.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 456
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 179
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 232
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 233 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 290
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 291 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 345
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 346 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGVVKSIE 397
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 398 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 455
>gi|308477324|ref|XP_003100876.1| CRE-UAF-1 protein [Caenorhabditis remanei]
gi|308264450|gb|EFP08403.1| CRE-UAF-1 protein [Caenorhabditis remanei]
Length = 496
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 207/369 (56%), Gaps = 37/369 (10%)
Query: 14 GAFPLMPVQ----VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGD 69
GA P VQ V+ T +RR+YVG +P NE+A+ FF+Q M + G + PG+
Sbjct: 161 GAVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQM-HLCGLAQAPGN 219
Query: 70 AVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQ 129
++ IN +K FAF+E R+++E + MA DGI F G ++VRRP DY P+ Q
Sbjct: 220 PILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPS--------Q 271
Query: 130 PSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRD 189
+ ++N A + ++S + + P+++F+GGLP Y TE Q+KELL SFG L F L D
Sbjct: 272 NTFDMN-ARMPVSSIVV---DSPNKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNMD-S 326
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ 249
GNSKGY F Y DP +TD A A LNG+++GDK L V+ A A+ + T
Sbjct: 327 QGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQTRHNTH---------- 376
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
L S G +S ++LCL +T D L DE+YEEILED+REEC
Sbjct: 377 --------LPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELRSDEDYEEILEDVREEC 428
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
KYG + ++ IPRP + PGVGKVF+E+ C A+ AL+GRKF TV YY
Sbjct: 429 SKYGIVRSLEIPRP-YDEQPVPGVGKVFVEFATTSDCQRAQAALTGRKFANRTVVTSYYD 487
Query: 370 EDKYFNKDY 378
DKY N+ +
Sbjct: 488 VDKYHNRQF 496
>gi|339243511|ref|XP_003377681.1| splicing factor U2AFsubunit [Trichinella spiralis]
gi|316973494|gb|EFV57074.1| splicing factor U2AFsubunit [Trichinella spiralis]
Length = 402
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 206/358 (57%), Gaps = 31/358 (8%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P E+A+ FF+Q M + G + G+ ++ IN +K
Sbjct: 76 VPVVGPSVTCQSRRLYVGNIPFGCTEEAMMDFFNQQMH-LCGLAQALGNPILACQINLDK 134
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R++ E + AMA DGI ++G ++++RRP DY QP P N G
Sbjct: 135 NFAFIEFRSIAETTAAMAFDGINYQGQSLKIRRPRDY-----------QPLPGQNDTLAG 183
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
L S + A+ P ++F+GGLP Y +E Q+KELL SFG L F+L+KD T SKGY F
Sbjct: 184 LVSSVV--ADSPYKLFIGGLPNYLSEEQVKELLISFGQLKAFNLIKDPATQISKGYAFAE 241
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y D +TD A A LNG+++GDK L V+ A S+ A+ A +A+Q
Sbjct: 242 YSDSTLTDQAIAGLNGMQLGDKKLVVQLA------------SVGAKNNMFSAAAPVAIQV 289
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI 320
GMN + + E +LCL + A+ L D+EEY++I+ED++EEC KYG++ +V I
Sbjct: 290 PGMNVVNPAATPATE----ILCLMNMVVAEELVDNEEYDDIVEDIKEECCKYGSVKSVEI 345
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
PRP + G + PGVGKVF+E+ + C A+ AL+GRKF V Y+ D Y + +
Sbjct: 346 PRPIE-GLDVPGVGKVFVEFGTVMECQKAQQALTGRKFANRVVVTSYFDPDLYHRRQF 402
>gi|444724150|gb|ELW64768.1| Splicing factor U2AF 65 kDa subunit [Tupaia chinensis]
Length = 447
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 112 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 170
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 171 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 223
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 224 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 281
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 282 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 336
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 337 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 388
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 389 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 446
>gi|301782083|ref|XP_002926459.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 496
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 161 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 219
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 220 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 272
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 273 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 330
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 331 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 385
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 386 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 437
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 438 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 495
>gi|410982179|ref|XP_003997437.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Felis catus]
Length = 471
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 360
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 361 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 412
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 413 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|410905623|ref|XP_003966291.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Takifugu
rubripes]
Length = 458
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 209/359 (58%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 181
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 234
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 235 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 292
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D + D A A LNG+++GDK L V+RA+ S Q I + LQ
Sbjct: 293 EYVDVNLNDQAIAGLNGMQLGDKKLLVQRASXXXXXS----------FQTSINQTPVTLQ 342
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+N+ ++ G +VLCL + + L DDEEYEEI+ED+R+ECGKYG + ++
Sbjct: 343 VPGLNS---SVTQMGGVPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECGKYGQVKSIE 399
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ A L+GRKF V Y D Y +D+
Sbjct: 400 IPRP-VDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 457
>gi|344270173|ref|XP_003406920.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa
subunit-like [Loxodonta africana]
Length = 471
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 360
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 361 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 412
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 413 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|63101571|gb|AAH94451.1| U2af2 protein, partial [Mus musculus]
Length = 403
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 68 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 126
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 127 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 179
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 180 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 237
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 238 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA-----KNATLSTINQTPVTLQVPGLM 292
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 293 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 344
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 345 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 402
>gi|348688506|gb|EGZ28320.1| hypothetical protein PHYSODRAFT_309221 [Phytophthora sojae]
Length = 694
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 209/354 (59%), Gaps = 11/354 (3%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q TRHARR+YVGG+ ++ E I FF+ V+ G G +VV+VYIN E+ FAFVE
Sbjct: 351 QQTRHARRLYVGGIGEIS-EPEITAFFNDVIDRALGEKQ-EGGSVVSVYINRERHFAFVE 408
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP-TLAAALGPGQPSPNLNLAAVGLASGA 145
+RT+E + M LDG+ + G +++RRP DYNP T+ LGP P LNLAA+G+ S
Sbjct: 409 LRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGP---IPQLNLAALGIVSTT 465
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ ++GP ++F+GGLPY+ E Q+KELL++FG L F LVK+ + SKGYGFC Y D
Sbjct: 466 V--SDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDIN 523
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
VTD AC LN +++GDKTLTVRRA + + + + M +
Sbjct: 524 VTDAACLGLNDMRLGDKTLTVRRAMSQENAKAVASAAGTVNTGLEMGLDPSRAAMQAM-S 582
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQ 325
L G SL T ++V+ L +T + L D+EEY +IL+D++ EC ++G + ++++PRP
Sbjct: 583 LAGIPSLPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRP-- 640
Query: 326 NGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
G VGKVF+E+ D +A L GR F TV + E KY ++ +
Sbjct: 641 RDGIPSAVGKVFVEFGDVQSAQSAATELHGRGFSNRTVAVEFMDEGKYARRELA 694
>gi|432908695|ref|XP_004077988.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oryzias latipes]
Length = 458
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 211/359 (58%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 181
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 234
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 235 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 292
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D + D A A LNG+++GDK L V+RA+ S + + L Q + LQ
Sbjct: 293 EYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGS------KNATLTSINQ----TPVTLQ 342
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+N+ ++ G +VLCL + + L DDEEYEEI+ED+REECGKYG + ++
Sbjct: 343 VPGLNS---SVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECGKYGQVKSIE 399
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ A L+GRKF V Y D Y +D+
Sbjct: 400 IPRP-VDGLEVPGTGKIFVEFTSVFDAQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 457
>gi|417410850|gb|JAA51891.1| Putative splicing factor u2af large subunit rrm superfamily,
partial [Desmodus rotundus]
Length = 455
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 120 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 178
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 179 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 231
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 232 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 289
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 290 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA-----KNATLSTINQTPVTLQVPGLM 344
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 345 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 396
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 397 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 454
>gi|60279268|ref|NP_001012496.1| splicing factor U2AF 65 kDa subunit isoform b [Homo sapiens]
gi|164565377|ref|NP_598432.2| splicing factor U2AF 65 kDa subunit isoform 2 [Mus musculus]
gi|109461136|ref|XP_001060115.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 6 [Rattus
norvegicus]
gi|338709958|ref|XP_001496159.3| PREDICTED: splicing factor U2AF 65 kDa subunit [Equus caballus]
gi|348551787|ref|XP_003461710.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 1 [Cavia
porcellus]
gi|359318549|ref|XP_003638845.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Canis lupus
familiaris]
gi|395861318|ref|XP_003802936.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Otolemur garnettii]
gi|397471087|ref|XP_003807136.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Pan paniscus]
gi|403308602|ref|XP_003944746.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Saimiri boliviensis
boliviensis]
gi|14250571|gb|AAH08740.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|27695339|gb|AAH43071.1| U2af2 protein [Mus musculus]
gi|39644972|gb|AAH30574.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|119592810|gb|EAW72404.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_c [Homo
sapiens]
gi|148699339|gb|EDL31286.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2,
isoform CRA_a [Mus musculus]
gi|149016700|gb|EDL75886.1| similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b
[Rattus norvegicus]
gi|261858294|dbj|BAI45669.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|325463253|gb|ADZ15397.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|380783067|gb|AFE63409.1| splicing factor U2AF 65 kDa subunit isoform b [Macaca mulatta]
gi|389618965|gb|AFK92990.1| U2 small nuclear RNA auxiliary factor 2 [Sus scrofa]
gi|410212802|gb|JAA03620.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260572|gb|JAA18252.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291502|gb|JAA24351.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|431902970|gb|ELK09152.1| Splicing factor U2AF 65 kDa subunit [Pteropus alecto]
Length = 471
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 360
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 361 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 412
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 413 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|410351435|gb|JAA42321.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 471
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 360
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 361 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 412
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 413 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|432908699|ref|XP_004077990.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oryzias latipes]
Length = 479
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 211/359 (58%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 144 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 202
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 203 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 255
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 256 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 313
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D + D A A LNG+++GDK L V+RA+ S + + L Q + LQ
Sbjct: 314 EYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGS------KNATLTSINQ----TPVTLQ 363
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+N+ ++ G +VLCL + + L DDEEYEEI+ED+REECGKYG + ++
Sbjct: 364 VPGLNS---SVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECGKYGQVKSIE 420
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ A L+GRKF V Y D Y +D+
Sbjct: 421 IPRP-VDGLEVPGTGKIFVEFTSVFDAQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 478
>gi|432908697|ref|XP_004077989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oryzias latipes]
Length = 474
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 211/359 (58%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 139 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 197
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 198 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 250
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 251 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 308
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D + D A A LNG+++GDK L V+RA+ S + + L Q + LQ
Sbjct: 309 EYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGS------KNATLTSINQ----TPVTLQ 358
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+N+ ++ G +VLCL + + L DDEEYEEI+ED+REECGKYG + ++
Sbjct: 359 VPGLNS---SVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECGKYGQVKSIE 415
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ A L+GRKF V Y D Y +D+
Sbjct: 416 IPRP-VDGLEVPGTGKIFVEFTSVFDAQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 473
>gi|341891946|gb|EGT47881.1| hypothetical protein CAEBREN_25972 [Caenorhabditis brenneri]
Length = 491
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 33/358 (9%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P NE+A+ FF+Q M + G + PG+ ++ IN +K
Sbjct: 167 VPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQM-HLCGLAQAPGNPILLCQINLDK 225
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+++E + MA DGI F G ++VRRP DY P+ Q + ++N + +
Sbjct: 226 NFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPS--------QNTFDMN-SRMP 276
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
++S + A +++F+GGLP Y TE Q+KELL SFG L F L D GNSKGY F
Sbjct: 277 VSSIVVDSA---NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAE 332
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y DP +TD A A LNG+++GDK L V+ A A+ + T L
Sbjct: 333 YLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQTRHNTH------------------LPN 374
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI 320
S G +S +VLCL +T D L DE+YEEILED+REEC KYG + ++ I
Sbjct: 375 SASAIAGIDLSQGAGRATEVLCLMNMVTEDELKSDEDYEEILEDVREECSKYGIVRSLEI 434
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
PRP + PGVGKVF+E+ C A+ AL+GRKF TV YY DKY N+ +
Sbjct: 435 PRP-YDEHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 491
>gi|1710361|gb|AAB38280.1| splicing factor U2AF65 [Caenorhabditis briggsae]
Length = 488
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 206/370 (55%), Gaps = 37/370 (10%)
Query: 14 GAFPLMPVQ----VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGD 69
GA P VQ V+ T +RR+YVG +P NE+A+ FF+Q M + + PG+
Sbjct: 152 GAVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQM-HLCNLAQAPGN 210
Query: 70 AVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQ 129
++ IN +K FAF+E R+++E + MA DGI F G ++VRRP DY P+ Q
Sbjct: 211 PILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPS--------Q 262
Query: 130 PSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRD 189
+ ++N A + ++S + A +++F+GGLP Y TE Q+KELL SFG L F L D
Sbjct: 263 NTFDMN-ARMPVSSIVVDSA---NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-S 317
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ 249
GNSKGY F Y DP +TD A A LNG+++GDK L V+ A A+ + T
Sbjct: 318 QGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQTRHNTH---------- 367
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
L S G +S ++LCL +T D L DE+YEEILED+REEC
Sbjct: 368 --------LPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELRSDEDYEEILEDVREEC 419
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
KYG + ++ IPRP + PGVGKVF+E+ C A+ AL+GRKF TV YY
Sbjct: 420 SKYGIVRSLEIPRP-YDDHPVPGVGKVFVEFATTSDCQRAQAALTGRKFANRTVVTSYYD 478
Query: 370 EDKYFNKDYS 379
DKY N+ ++
Sbjct: 479 VDKYHNRQFN 488
>gi|268575804|ref|XP_002642882.1| C. briggsae CBR-UAF-1 protein [Caenorhabditis briggsae]
gi|60415989|sp|P90727.2|U2AF2_CAEBR RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
Length = 488
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 206/370 (55%), Gaps = 37/370 (10%)
Query: 14 GAFPLMPVQ----VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGD 69
GA P VQ V+ T +RR+YVG +P NE+A+ FF+Q M + + PG+
Sbjct: 152 GAVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQM-HLCNLAQAPGN 210
Query: 70 AVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQ 129
++ IN +K FAF+E R+++E + MA DGI F G ++VRRP DY P+ Q
Sbjct: 211 PILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPS--------Q 262
Query: 130 PSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRD 189
+ ++N A + ++S + A +++F+GGLP Y TE Q+KELL SFG L F L D
Sbjct: 263 NTFDMN-ARMPVSSIVVDSA---NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-S 317
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ 249
GNSKGY F Y DP +TD A A LNG+++GDK L V+ A A+ + T
Sbjct: 318 QGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQTRHNTH---------- 367
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
L S G +S ++LCL +T D L DE+YEEILED+REEC
Sbjct: 368 --------LPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELRSDEDYEEILEDVREEC 419
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
KYG + ++ IPRP + PGVGKVF+E+ C A+ AL+GRKF TV YY
Sbjct: 420 SKYGIVRSLEIPRP-YDDHPVPGVGKVFVEFATTSDCQRAQAALTGRKFANRTVVTSYYD 478
Query: 370 EDKYFNKDYS 379
DKY N+ ++
Sbjct: 479 VDKYHNRQFN 488
>gi|198432988|ref|XP_002130386.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 1 [Ciona intestinalis]
Length = 482
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 211/361 (58%), Gaps = 30/361 (8%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V Q TR ARR+YVG +P E A+ FF+ M I G + PG ++ V IN +K
Sbjct: 150 VPVAGSQMTRQARRLYVGNIPFGVTEDAMMDFFNNQMQ-IAGLAQAPGQPILAVQINLDK 208
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + A+A DGI F ++++RRP+DY P L +L QP+ +L G
Sbjct: 209 NFAFLEFRSVDETTQALAFDGINFMNQSLKIRRPSDYKP-LPGSLE--QPAIHLP----G 261
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ S + ++ ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY F
Sbjct: 262 VISTVVQDSQ--HKMFIGGLPNYLNDDQVKELLTSFGPLRAFNLVKDSATALSKGYAFAE 319
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQ-KMALQ 259
+ D ++TD A A LNG+++GDK L V+RA SI A+ H AI + LQ
Sbjct: 320 FADYSLTDQAIAGLNGMQLGDKKLIVQRA------------SIGAKNNPHGAIMAPVTLQ 367
Query: 260 TSGM-NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
GM + G G + VLCL + + L DDEEYEEI+ED+++ECGK G++V++
Sbjct: 368 IPGMAHATGAGPA------TTVLCLMNMVLPEELTDDEEYEEIMEDVKDECGKLGSVVSL 421
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP E GVGK+++E+ + + A ALSGRKF V ++ ++Y ++ +
Sbjct: 422 EIPRPGPGLTEADGVGKIYVEFANHLDTQKAAQALSGRKFSNRVVVTSFFDPERYHHRQF 481
Query: 379 S 379
S
Sbjct: 482 S 482
>gi|301117646|ref|XP_002906551.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262107900|gb|EEY65952.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 569
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 208/354 (58%), Gaps = 11/354 (3%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q TRHARR+YVGG+ ++ E I FF+ V+ G G +VV+VYIN E+ FAFVE
Sbjct: 226 QQTRHARRLYVGGIGEIS-EPEITAFFNDVIDRALGEKQE-GGSVVSVYINRERHFAFVE 283
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP-TLAAALGPGQPSPNLNLAAVGLASGA 145
+R++E + M LDG+ + G +++RRP DYNP T+ LGP P LNLAA+G+ S
Sbjct: 284 LRSIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGP---IPQLNLAALGIVSTT 340
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ ++GP ++F+GGLPY+ E Q+KELL++FG L F LVK+ + SKGYGFC Y D
Sbjct: 341 V--SDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDIN 398
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
VTD AC LN +++GDKTLTVRRA + + + + M +
Sbjct: 399 VTDAACIGLNDMQLGDKTLTVRRAMSQENAKAVASAAGTVNTGLEMGLDPSLAAMQAM-S 457
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQ 325
+ G S+ T ++V+ L +T + L D+EEY +IL+D++ EC ++G + ++++PRP
Sbjct: 458 MAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRD 517
Query: 326 NGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
G VGKVF+E+ D A L GR F TV + E KY ++ S
Sbjct: 518 --GVLSAVGKVFVEFADVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARREIS 569
>gi|388856534|emb|CCF49840.1| related to pre-mRNA splicing factor U2AF large chain [Ustilago
hordei]
Length = 718
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 215/378 (56%), Gaps = 40/378 (10%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P +V Q R ARR+YVG + ANE + FF++ M + + PG+ V+ +N +
Sbjct: 330 PEEVAQQNNNRQARRLYVGNITHSANEPNMVAFFNEQMLKLKLGTE-PGEPAVSAQVNVD 388
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K +AFVE R EEA+NAM+ DGI+F+G ++++RRP DY GP P N+
Sbjct: 389 KGYAFVEFRHPEEATNAMSFDGIVFQGQSLKIRRPKDY-------TGPDV-RPASNIHVP 440
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + P ++FVGGLP Y T+ Q+ ELL++FG L F+LVKD G SKG+ FC
Sbjct: 441 GVISTNV--PDSPHKIFVGGLPTYLTDDQVIELLQAFGELRAFNLVKDTANGASKGFAFC 498
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D A+TD+AC LNG+++GD+ L V+RA+ S+ + ++I A A+ +
Sbjct: 499 EYVDTALTDLACQGLNGMELGDRNLVVQRASVG---SEKKAQAIAATGANAGALGDAGMP 555
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S G G GE + ++ L +T + L DDEEY +I+ED+REEC KYGT+ +V
Sbjct: 556 SSVQQFAGEGGDA-GEPRSCMVMLN-MVTPEELQDDEEYADIVEDIREECTKYGTVTDVR 613
Query: 320 IPRPDQ-------------------NGGETP-----GVGKVFLEYYDAVGCATAKNALSG 355
+PRP + +GGE P GVG+V++ Y + CA A A++G
Sbjct: 614 VPRPAKESKGAAAHQWKRTQDESAASGGEKPATEREGVGRVYVRYAETGDCAQALRAIAG 673
Query: 356 RKFGGNTVNAFYYPEDKY 373
R+FGG TV + ED +
Sbjct: 674 RQFGGRTVICAFLKEDNW 691
>gi|348526426|ref|XP_003450720.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 487
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 211/359 (58%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 152 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 210
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 211 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 263
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 264 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 321
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D + D A A LNG+++GDK L V+RA+ S + + L+ Q + LQ
Sbjct: 322 EYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGS------KNATLSSINQ----TPVTLQ 371
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+N+ ++ G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 372 VPGLNS---SVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIE 428
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ A L+GRKF V Y D Y +D+
Sbjct: 429 IPRP-VDGLEVPGTGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 486
>gi|71022561|ref|XP_761510.1| hypothetical protein UM05363.1 [Ustilago maydis 521]
gi|46101379|gb|EAK86612.1| hypothetical protein UM05363.1 [Ustilago maydis 521]
Length = 727
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 214/382 (56%), Gaps = 46/382 (12%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P ++ Q A R ARR+YVG + ANEQ I FF++ M + + PG+ V+ +N +
Sbjct: 340 PAELAAQNANRQARRLYVGNITHQANEQNIVAFFNEQMLKLKLGTE-PGEPAVSAQVNVD 398
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K +AFVE R EEA+NAM+ DGI+F+ ++++RRP DY GP P+ N+
Sbjct: 399 KGYAFVEFRHPEEATNAMSFDGIVFQAQSLKIRRPKDY-------TGPDIRPPS-NIHVP 450
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + P ++FVGGLP Y + Q+ ELL++FG L F+LVKD TG SKG+ FC
Sbjct: 451 GVISTNV--PDSPHKIFVGGLPTYLNDDQVIELLQAFGELRAFNLVKDTGTGASKGFAFC 508
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y DPA+TD+AC LNG+++GD+ L V+RA+ S+ + +++ A A+ A+
Sbjct: 509 EYVDPALTDLACQGLNGMELGDRNLVVQRASVG---SEKKAQALAATGANMGALGGAAVP 565
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLT--EAITADALADDEEYEEILEDMREECGKYGTLVN 317
+S G G G+ C+ +T + L DDEEY +I+ED+R+EC KYG + +
Sbjct: 566 SSVQKFAGDG----GDAGEPTTCMVMLNMVTPEELQDDEEYADIVEDIRDECNKYGAVSD 621
Query: 318 VVIPRP--------------DQNGG------------ETPGVGKVFLEYYDAVGCATAKN 351
V IPRP Q+ G E GVG+V++ Y + CA A
Sbjct: 622 VRIPRPAKESKGAAAHQWKRSQDEGATTVDGEKATSAEREGVGRVYVRYGETEHCAQALR 681
Query: 352 ALSGRKFGGNTVNAFYYPEDKY 373
A++GR+FGG TV + ED +
Sbjct: 682 AIAGRQFGGRTVICAFLREDDW 703
>gi|291190480|ref|NP_001167275.1| Splicing factor U2AF 65 kDa subunit [Salmo salar]
gi|223648990|gb|ACN11253.1| Splicing factor U2AF 65 kDa subunit [Salmo salar]
Length = 474
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 207/358 (57%), Gaps = 23/358 (6%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +K
Sbjct: 139 VPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQM-CLGGLTQAPGNPVLAVQINQDK 197
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P + P P G
Sbjct: 198 NFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSESPSVYVP-------G 250
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY FC
Sbjct: 251 VVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATALSKGYAFCE 308
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y D + D A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 309 YVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----ALTGMNQTPVTLQVPGLMP 363
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI 320
+ M +LGG +VLCL + + L DDEEYEEI+ED+R+ECGKYG + ++ I
Sbjct: 364 TSMASLGG-------LPTEVLCLMNMVAVEELLDDEEYEEIVEDVRDECGKYGQVKSIEI 416
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
PRP +G E PG GK+F+E+ A AL+GRKF V Y D Y +D+
Sbjct: 417 PRP-VDGLEVPGTGKIFVEFMTLFDSQKAMQALTGRKFANRVVVTKYCDPDAYHRRDF 473
>gi|47221657|emb|CAF97922.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 210/359 (58%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 181
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 234
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 235 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 292
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D + D A A LNG+++GDK L V+RA+ S + + L Q + LQ
Sbjct: 293 EYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGS------KNATLTSINQ----TPVTLQ 342
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+N+ ++ G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 343 VPGLNS---SVTQMGGVPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIE 399
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ A L+GRKF V Y D Y +D+
Sbjct: 400 IPRP-VDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 457
>gi|71480064|ref|NP_001025127.1| U2 small nuclear RNA auxiliary factor 2a [Danio rerio]
gi|68533572|gb|AAH98548.1| U2 small nuclear RNA auxiliary factor 2a [Danio rerio]
Length = 465
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 210/359 (58%), Gaps = 23/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 129 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 187
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 188 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 240
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 241 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 298
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D ++D A A LNG+++GDK L V+RA+ S + ++ Q + +Q L
Sbjct: 299 EYVDVNISDQAIAGLNGMQLGDKKLLVQRASVGSKNT-----TLTGINQTPVTLQVPGLM 353
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
S +N +GG +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 354 NSSVNQMGG-------IPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIE 406
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G + PG GK+F+E+ A L+GRK V Y D Y +D+
Sbjct: 407 IPRP-VDGLDIPGTGKIFVEFMSVFDSQKAMQGLTGRKSANRVVVTKYCDPDAYHRRDF 464
>gi|449669310|ref|XP_004206989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Hydra
magnipapillata]
Length = 480
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 202/368 (54%), Gaps = 36/368 (9%)
Query: 18 LMPVQVMTQ--QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVY 75
++P + Q Q T ARR+Y G LP E + FF+ M + PG+ V+
Sbjct: 143 VIPATALPQGAQMTMQARRLYCGNLPFGITEDLMVDFFNAKMRE-SDMARQPGNPVLACQ 201
Query: 76 INHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLN 135
IN EK FAF+E R+VEE + AMA DGII +G A+++RRP DY P + G P+
Sbjct: 202 INLEKNFAFLEFRSVEETTLAMAFDGIILQGQALKIRRPKDYQP-IPGINGMAYPTLFAE 260
Query: 136 LAAV---GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
A G+ S + ++ ++VFVGGLP Y E Q+KELL +FG L F+LVKD TG
Sbjct: 261 SQATHIPGVVSTVV--SDTINKVFVGGLPNYLNEDQVKELLSTFGELRAFNLVKDSATGL 318
Query: 193 SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIA 252
SKGY FC Y D +TD+A A +NG+++GDK L V+RA+ S ++ T Q +I
Sbjct: 319 SKGYAFCEYVDIGITDVAIAGMNGMQLGDKKLIVQRASVGS-KTMTAQLNI--------- 368
Query: 253 IQKMALQTSGMNTLGGGMSLFGE-TLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
G L E T +LCL + A+ L DDE+Y+EI ED+REEC K
Sbjct: 369 ---------------PGFDLNKEITATNILCLMNMVVAEELMDDEDYDEIFEDIREECSK 413
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPED 371
YG + ++ IPRP+ N G+GKVF+EY + A AL+GRKF V YY D
Sbjct: 414 YGRIRSMQIPRPN-NEFLVSGIGKVFIEYATSGESKVASEALAGRKFANRVVVTAYYDPD 472
Query: 372 KYFNKDYS 379
Y D+S
Sbjct: 473 SYHRHDFS 480
>gi|348526428|ref|XP_003450721.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 458
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 211/359 (58%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 181
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 234
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 235 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 292
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D + D A A LNG+++GDK L V+RA+ S + + L+ Q + LQ
Sbjct: 293 EYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGS------KNATLSSINQ----TPVTLQ 342
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+N+ ++ G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 343 VPGLNS---SVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIE 399
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ A L+GRKF V Y D Y +D+
Sbjct: 400 IPRP-VDGLEVPGTGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 457
>gi|348526424|ref|XP_003450719.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 475
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 211/359 (58%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+++ FF+ M +GG + PG+ V+ V IN +
Sbjct: 140 PVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 198
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 199 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 251
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 252 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 309
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D + D A A LNG+++GDK L V+RA+ S + + L+ Q + LQ
Sbjct: 310 EYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGS------KNATLSSINQ----TPVTLQ 359
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+N+ ++ G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 360 VPGLNS---SVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIE 416
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ A L+GRKF V Y D Y +D+
Sbjct: 417 IPRP-VDGLEVPGTGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDF 474
>gi|71996490|ref|NP_001022970.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
gi|351018337|emb|CCD62281.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
Length = 471
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 203/358 (56%), Gaps = 33/358 (9%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P NE+A+ FF+Q M + G + PG+ ++ IN +K
Sbjct: 147 VPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQM-HLCGLAQAPGNPILLCQINLDK 205
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+++E + MA DGI F G ++VRRP DY P+ Q + ++N + +
Sbjct: 206 NFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPS--------QNTFDMN-SRMP 256
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+++ + A +++F+GGLP Y TE Q+KELL SFG L F L D GNSKGY F
Sbjct: 257 VSTIVVDSA---NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAE 312
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y DP +TD A A LNG+++GDK L V+ A A+ + T L
Sbjct: 313 YLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTN------------------LPN 354
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI 320
S G +S ++LCL +T D L D+EYEEILED+R+EC KYG + ++ I
Sbjct: 355 SASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEI 414
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
PRP ++ PGVGKVF+E+ C A+ AL+GRKF TV YY DKY N+ +
Sbjct: 415 PRPYED-HPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 471
>gi|71996475|ref|NP_001022967.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
gi|6226906|sp|P90978.2|U2AF2_CAEEL RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
gi|3334906|gb|AAC26982.1| splicing factor U2AF65 [Caenorhabditis elegans]
gi|351018334|emb|CCD62278.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
Length = 496
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 203/358 (56%), Gaps = 33/358 (9%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P NE+A+ FF+Q M + G + PG+ ++ IN +K
Sbjct: 172 VPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQM-HLCGLAQAPGNPILLCQINLDK 230
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+++E + MA DGI F G ++VRRP DY P+ Q + ++N + +
Sbjct: 231 NFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPS--------QNTFDMN-SRMP 281
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+++ + A +++F+GGLP Y TE Q+KELL SFG L F L D GNSKGY F
Sbjct: 282 VSTIVVDSA---NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAE 337
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y DP +TD A A LNG+++GDK L V+ A A+ + T L
Sbjct: 338 YLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTN------------------LPN 379
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI 320
S G +S ++LCL +T D L D+EYEEILED+R+EC KYG + ++ I
Sbjct: 380 SASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEI 439
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
PRP ++ PGVGKVF+E+ C A+ AL+GRKF TV YY DKY N+ +
Sbjct: 440 PRPYED-HPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 496
>gi|71996485|ref|NP_001022969.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
gi|351018336|emb|CCD62280.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
Length = 474
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 203/358 (56%), Gaps = 33/358 (9%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P NE+A+ FF+Q M + G + PG+ ++ IN +K
Sbjct: 150 VPVVGPSVTCQSRRLYVGNIPFGCNEEAMLDFFNQQM-HLCGLAQAPGNPILLCQINLDK 208
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+++E + MA DGI F G ++VRRP DY P+ Q + ++N + +
Sbjct: 209 NFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQPS--------QNTFDMN-SRMP 259
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+++ + A +++F+GGLP Y TE Q+KELL SFG L F L D GNSKGY F
Sbjct: 260 VSTIVVDSA---NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAE 315
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y DP +TD A A LNG+++GDK L V+ A A+ + T L
Sbjct: 316 YLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTN------------------LPN 357
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI 320
S G +S ++LCL +T D L D+EYEEILED+R+EC KYG + ++ I
Sbjct: 358 SASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEI 417
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
PRP ++ PGVGKVF+E+ C A+ AL+GRKF TV YY DKY N+ +
Sbjct: 418 PRPYED-HPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 474
>gi|354486866|ref|XP_003505598.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Cricetulus
griseus]
gi|344242983|gb|EGV99086.1| Splicing factor U2AF 65 kDa subunit [Cricetulus griseus]
Length = 469
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 212/360 (58%), Gaps = 24/360 (6%)
Query: 19 MPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINH 78
MPV V+ Q TR ARR+YVG +P E+A+ FF+ M +G + PG+ V+ V IN
Sbjct: 133 MPVPVVGSQMTRQARRLYVGNIPFGITEEAMKDFFNAQM-QLGVLTQVPGNPVLAVQINQ 191
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
EK FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 192 EKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYV 244
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
G+ S + + ++F+GG+P Y + ++KELL SFGTL F+LVKD TG SKGY F
Sbjct: 245 PGVVSTVV--PDSAHKLFIGGMPSYLNDDKVKELLTSFGTLKAFNLVKDSATGLSKGYAF 302
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y D TD A A LNG+++GDK L V+RA+ S + ++ Q + +Q L
Sbjct: 303 CEYLDINATDQAIAGLNGMQLGDKKLIVQRASVGSKNA-----TLSTINQTPVTVQVPGL 357
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
+S + +GG + +VLCL + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 358 MSSQVQ-MGGHPT-------EVLCLMNMVLPKELLDDEEYEEIVEDVRDECSKYGLVKSI 409
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP + G E PG G +F+E+ C A L+GR++ V Y D Y ++D+
Sbjct: 410 EIPRPVE-GVEVPGCGNIFVEFTSVFDCQKAMQGLTGRRYANKVVVTKYCDPDSYHSRDF 468
>gi|345480698|ref|XP_001604333.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Nasonia
vitripennis]
Length = 455
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 212/364 (58%), Gaps = 38/364 (10%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 128 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 186
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P++N
Sbjct: 187 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 240
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 241 VP------------DSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKG 288
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ +K I AQA I +
Sbjct: 289 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVG---AKNPMPMIGAQAPVQIQVPG 345
Query: 256 MALQ-TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
+++ TSG T +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 346 LSMVGTSGPPT-------------EVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGV 392
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 393 VRSVEIPRPIE-GVDVPGCGKVFVEFNSVLDCQKAQQTLTGRKFNNRVVVTSYFDPDKYH 451
Query: 375 NKDY 378
+++
Sbjct: 452 RREF 455
>gi|322792032|gb|EFZ16137.1| hypothetical protein SINV_12499 [Solenopsis invicta]
Length = 344
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/365 (40%), Positives = 211/365 (57%), Gaps = 42/365 (11%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 19 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 77
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P++N
Sbjct: 78 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 131
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 132 VP------------DSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKG 179
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ + + I AQA I +
Sbjct: 180 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVGA-----KNPMIGAQAPVQIQVP- 233
Query: 256 MALQTSGMNTLGGGMSLFGET--LAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
G+S+ G + +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 234 -------------GLSMVGTSGPATEVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYG 280
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 281 VVRSVEIPRPIE-GVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKY 339
Query: 374 FNKDY 378
+++
Sbjct: 340 HRREF 344
>gi|307176032|gb|EFN65791.1| Splicing factor U2AF 50 kDa subunit [Camponotus floridanus]
Length = 432
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 214/364 (58%), Gaps = 36/364 (9%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 103 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 161
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P++N
Sbjct: 162 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 215
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ G + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 216 VP------GTV--PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSATGLSKG 267
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ + + I AQA I +
Sbjct: 268 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVGA-----KNPMIGAQAPVQIQVPG 322
Query: 256 MALQ-TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
+++ TSG T +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 323 LSMVGTSGPAT-------------EVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGV 369
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 370 VRSVEIPRPIE-GVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYH 428
Query: 375 NKDY 378
+++
Sbjct: 429 RREF 432
>gi|383854116|ref|XP_003702568.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Megachile
rotundata]
Length = 432
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 214/364 (58%), Gaps = 36/364 (9%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 103 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 161
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P++N
Sbjct: 162 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 215
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ G + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 216 V------PGTV--PDSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKG 267
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ + + I AQA I +
Sbjct: 268 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVGA-----KNPMIGAQAPVQIQVPG 322
Query: 256 MALQ-TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
+++ TSG T +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 323 LSMVGTSGPAT-------------EVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGV 369
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 370 VRSVEIPRPIE-GVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYH 428
Query: 375 NKDY 378
+++
Sbjct: 429 RREF 432
>gi|340715832|ref|XP_003396412.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Bombus
terrestris]
gi|350417884|ref|XP_003491627.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Bombus impatiens]
Length = 432
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 214/364 (58%), Gaps = 36/364 (9%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 103 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 161
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P++N
Sbjct: 162 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 215
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ G + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 216 V------PGTV--PDSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKG 267
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ + + I AQA I +
Sbjct: 268 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVGA-----KNPMIGAQAPVQIQVPG 322
Query: 256 MALQ-TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
+++ TSG T +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 323 LSMVGTSGPAT-------------EVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGV 369
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 370 VRSVEIPRPIE-GVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYH 428
Query: 375 NKDY 378
+++
Sbjct: 429 RREF 432
>gi|332026432|gb|EGI66560.1| Splicing factor U2AF 50 kDa subunit [Acromyrmex echinatior]
Length = 435
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 212/364 (58%), Gaps = 40/364 (10%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 110 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 168
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P++N
Sbjct: 169 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 222
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 223 VP------------DSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKG 270
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ + + I AQA I +
Sbjct: 271 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVGA-----KNPMIGAQAPVQIQVPG 325
Query: 256 MALQ-TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
+++ TSG T +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 326 LSMVGTSGPAT-------------EVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGV 372
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 373 VRSVEIPRPIE-GVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKYH 431
Query: 375 NKDY 378
+++
Sbjct: 432 RREF 435
>gi|328766440|gb|EGF76494.1| hypothetical protein BATDEDRAFT_21058 [Batrachochytrium
dendrobatidis JAM81]
Length = 551
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 208/353 (58%), Gaps = 28/353 (7%)
Query: 26 QQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFV 85
Q R +R+Y G +P E+ I +F S +G PG+A VN YIN E+ +AFV
Sbjct: 227 QPIARQFKRLYFGNIPVDCIEERILSFASSSYEKLG-LPKDPGNAAVNAYINRERNYAFV 285
Query: 86 EMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGA 145
E R+ EEA+ AMALDG +F+G ++VRRP DYNP AA G QPS + A
Sbjct: 286 EFRSPEEATRAMALDGSLFDGNILKVRRPKDYNPE-AAPDGATQPS----------IAPA 334
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
E D++FVG +P Y ++ Q++ELL++FG L F L++D TG SKG+ FC Y D
Sbjct: 335 TSAQESLDKIFVGAIPTYLSDDQVQELLKTFGELKTFSLIRDSATGLSKGFAFCEYVDGQ 394
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
+TD AC LNG+++G+K L V+RA+ S ++ +I A Q + ++ L T +
Sbjct: 395 ITDAACQGLNGMELGEKKLIVQRASVGSNKN-----TISAVGQSQLLPMEI-LATIAKDP 448
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQ 325
+ +VL L + ++ L DE+Y++IL D++EEC K+GT++++ IPRP
Sbjct: 449 C---------KVTRVLLLLNMVVSEDLVSDEDYQDILLDIQEECEKFGTILDIAIPRP-V 498
Query: 326 NGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+G GVGK+F+++ + A+A++AL+GRKF V A ++ EDK+ +D+
Sbjct: 499 SGQSNAGVGKIFVKFDNVKQSASAQHALAGRKFADRVVIASFFDEDKFDQQDF 551
>gi|350417886|ref|XP_003491628.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Bombus impatiens]
Length = 428
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/365 (40%), Positives = 211/365 (57%), Gaps = 42/365 (11%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 103 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 161
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P++N
Sbjct: 162 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 215
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 216 VP------------DSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKG 263
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ + + I AQA I +
Sbjct: 264 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVGA-----KNPMIGAQAPVQIQVP- 317
Query: 256 MALQTSGMNTLGGGMSLFGET--LAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
G+S+ G + +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 318 -------------GLSMVGTSGPATEVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYG 364
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 365 VVRSVEIPRPIE-GVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKY 423
Query: 374 FNKDY 378
+++
Sbjct: 424 HRREF 428
>gi|355703931|gb|EHH30422.1| hypothetical protein EGK_11092, partial [Macaca mulatta]
Length = 453
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 205/348 (58%), Gaps = 20/348 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 181
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 234
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 235 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 292
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 293 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSPPSTINQTPVTLQ 346
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 347 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 403
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
IPRP +G E PG GK+F+E+ C A L+GRKF V Y
Sbjct: 404 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKY 450
>gi|343426615|emb|CBQ70144.1| related to pre-mRNA splicing factor U2AF large chain [Sporisorium
reilianum SRZ2]
Length = 710
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/393 (36%), Positives = 223/393 (56%), Gaps = 43/393 (10%)
Query: 8 FGATQLGAFPLM----PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
FG G++P P ++ Q A R ARR+YVG + NE I FF++ M +
Sbjct: 310 FGGADNGSYPSSQGPSPAELAAQNANRQARRLYVGNITHQTNEHNIVAFFNEQMLKLKLG 369
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+ PG+ V+ +N +K +AFVE R +EA+NAM+ DGI+F+ ++++RRP DY
Sbjct: 370 TE-PGEPAVSAQVNVDKGYAFVEFRHPDEATNAMSFDGIVFQAQSLKIRRPKDYT----- 423
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
GP P+ N+ G+ S + + P ++FVGGLP Y T+ Q+ ELL++FG L F+
Sbjct: 424 --GPDVRPPS-NIHVPGVISTNV--PDSPFKIFVGGLPTYLTDDQVIELLQAFGELRAFN 478
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI 243
LVKD TG SKG+ FC Y D A+TD+AC LNG+++GD+ L V+RA+ S+ + +++
Sbjct: 479 LVKDTGTGASKGFAFCEYVDTALTDLACQGLNGMELGDRNLVVQRASVG---SEKKAQAL 535
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
A A+ A+ +S + G GE + ++ L +T + L DDEEY +I+E
Sbjct: 536 AATGANSGALGIAAVPSSVQQSAGEDGDA-GEPTSCMVMLN-MVTPEELQDDEEYADIVE 593
Query: 304 DMREECGKYGTLVNVVIPRP----------------DQNG--GETP-----GVGKVFLEY 340
D+R+EC KYG + +V +PRP D++G G+ P GVG+V++ Y
Sbjct: 594 DIRDECTKYGAVTDVRVPRPAKESKGAAAHQWKRSQDESGAEGDKPDAEREGVGRVYVRY 653
Query: 341 YDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ CA A A++GR+FGG TV + ED +
Sbjct: 654 GETEHCAQALRAIAGRQFGGRTVICAFLKEDDW 686
>gi|427789501|gb|JAA60202.1| Putative splicing factor u2af large subunit rrm superfamily
[Rhipicephalus pulchellus]
Length = 462
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 204/350 (58%), Gaps = 29/350 (8%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
TR ARR+YVG +P +E+ + +F+ M A G + A PG+ V+ IN +K FAF+E R
Sbjct: 142 TRQARRLYVGNIPFGCSEEEMMDYFNAQMHACGFSQA-PGNPVLACQINLDKNFAFLEFR 200
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+++E + AMA DGI F+G ++++RRP DY P PG S ++A G+ S +
Sbjct: 201 SIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGM-SETPSVAVPGVISTVV-- 251
Query: 149 AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD 208
+ P ++F+GGLP Y E Q++ELL SFG L F+LVKD TG SKGY FC Y + A TD
Sbjct: 252 QDSPHKIFIGGLPNYLNEDQVRELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVEVATTD 311
Query: 209 IACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGG 268
A LNG+++GDK L V+RA+ + S+ Q + +Q G+ GG
Sbjct: 312 QAIMGLNGMQLGDKKLIVQRASVGAKNSQMNQAPV-------------QIQVPGLQLQGG 358
Query: 269 GMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGG 328
+VLCL + + L D+EEYE+ILED+ EEC KYG + ++ IPRP +G
Sbjct: 359 -----AGPPTEVLCLMNLVCPEELKDEEEYEDILEDIHEECNKYGVVKSIEIPRPI-DGV 412
Query: 329 ETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E PG GK ++E+ + C A+ +L+GRKF V Y+ DKY +++
Sbjct: 413 EVPGCGKAYVEFNSVIDCQKAQQSLTGRKFSNRVVVTSYFDPDKYHRREF 462
>gi|307195151|gb|EFN77144.1| Splicing factor U2AF 50 kDa subunit [Harpegnathos saltator]
Length = 402
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 210/365 (57%), Gaps = 42/365 (11%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 77 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 135
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P++N
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 189
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 190 VP------------DSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKG 237
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ + + I QA I +
Sbjct: 238 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVGA-----KNPMIGTQAPVQIQVP- 291
Query: 256 MALQTSGMNTLGGGMSLFGET--LAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
G+S+ G + +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 292 -------------GLSMVGSSGPATEVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYG 338
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 339 VVRSVEIPRPIE-GVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKY 397
Query: 374 FNKDY 378
+++
Sbjct: 398 HRREF 402
>gi|327280717|ref|XP_003225098.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 467
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 213/370 (57%), Gaps = 35/370 (9%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 179
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 232
Query: 140 GLASGAIGGAEGPDRVFVGGLPYY-----------FTETQIKELLESFGTLHGFDLVKDR 188
G+ S + + ++F+GGLP Y F Q+KELL SFG L F+LVKD
Sbjct: 233 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVMFLPPFLSCQVKELLTSFGPLKAFNLVKDS 290
Query: 189 DTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
TG SKGY FC Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q
Sbjct: 291 ATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQ 345
Query: 249 QHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREE 308
+ +Q L +S + +GG + +VLCL + + L DDEEYEEI+ED+R+E
Sbjct: 346 TPVTLQVPGLMSSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDE 397
Query: 309 CGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYY 368
C KYG + ++ IPRP +G E PG GK+F+E+ C A L+GRKF V Y
Sbjct: 398 CSKYGVVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYC 456
Query: 369 PEDKYFNKDY 378
D Y +D+
Sbjct: 457 DPDSYHRRDF 466
>gi|405976087|gb|EKC40607.1| Splicing factor U2AF 50 kDa subunit [Crassostrea gigas]
Length = 428
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 207/350 (59%), Gaps = 32/350 (9%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ARR+YVG +P E+A+ FF+ M G A G V+ V IN +K FAF+E R
Sbjct: 111 SRQARRLYVGNIPFGVTEEAMMDFFNHQMKMTGLAQA-EGSPVIAVQINLDKNFAFLEFR 169
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+V+E + AMA DGI F+G ++++RRP DY P A +P++N+ G+ S +
Sbjct: 170 SVDETTQAMAFDGINFQGQSLKIRRPRDYQPLPGMA-----ETPSVNVP--GVVSTVV-- 220
Query: 149 AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD 208
+ P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKGY FC Y DP VTD
Sbjct: 221 QDSPHKIFIGGLPNYLNEDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDPNVTD 280
Query: 209 IACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGG 268
CA LNG+++GDK L V+RA+ + S+ + +Q LQ G+N G
Sbjct: 281 QGCAGLNGMQLGDKKLIVQRASLGAKNSQ-------------VPVQ---LQIPGLNLNQG 324
Query: 269 GMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGG 328
+VLCL I + L D+EEYE+ILED++EEC KYG + ++ IPRP + G
Sbjct: 325 -----AGPPTEVLCLMNMIVPEELEDEEEYEDILEDVKEECSKYGVVRSIEIPRPIK-GV 378
Query: 329 ETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+ PG GK+F+E+ + C A+ AL+GRKF V YY DKY +++
Sbjct: 379 DVPGCGKIFVEFNSIIDCQKAQQALTGRKFSNRVVVTSYYDPDKYHRREF 428
>gi|66520699|ref|XP_623055.1| PREDICTED: splicing factor U2AF 50 kDa subunit [Apis mellifera]
Length = 432
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 146/365 (40%), Positives = 212/365 (58%), Gaps = 38/365 (10%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 103 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 161
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA D I F+G ++++RRP DY P PG +P++N
Sbjct: 162 NLDKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 215
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ G + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 216 VP------GTV--PDSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKG 267
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ + + I AQA I +
Sbjct: 268 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVGA-----KNPMIGAQAPVQIQVP- 321
Query: 256 MALQTSGMNTLGGGMSLFGET--LAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
G+S+ G + +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 322 -------------GLSMVGTSGPATEVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYG 368
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 369 VVRSVEIPRPIE-GVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKY 427
Query: 374 FNKDY 378
+++
Sbjct: 428 HRREF 432
>gi|380016747|ref|XP_003692335.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Apis florea]
Length = 428
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 210/365 (57%), Gaps = 42/365 (11%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 103 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 161
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-SPNLN 135
N +K FAF+E R+++E + AMA D I F+G ++++RRP DY P PG +P++N
Sbjct: 162 NLDKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDYQPM------PGMTDNPSMN 215
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKG
Sbjct: 216 VP------------DSPHKIFIGGLPNYLNEEQVKELLMSFGQLRAFNLVKDSATGLSKG 263
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y FC Y D ++TD A A LNG+++GDK L V+RA+ + + I AQA I +
Sbjct: 264 YAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQRASVGA-----KNPMIGAQAPVQIQVP- 317
Query: 256 MALQTSGMNTLGGGMSLFGET--LAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
G+S+ G + +VLCL +T + L ++EEYE+ILED++EEC KYG
Sbjct: 318 -------------GLSMVGTSGPATEVLCLLNMVTPEELMEEEEYEDILEDIKEECNKYG 364
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ +V IPRP + G + PG GKVF+E+ + C A+ L+GRKF V Y+ DKY
Sbjct: 365 VVRSVEIPRPIE-GVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTSYFDPDKY 423
Query: 374 FNKDY 378
+++
Sbjct: 424 HRREF 428
>gi|355756173|gb|EHH59920.1| hypothetical protein EGM_10153, partial [Macaca fascicularis]
Length = 442
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 203/339 (59%), Gaps = 20/339 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 181
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 234
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 235 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 292
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 293 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSPPSTINQTPVTLQ 346
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 347 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 403
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKF 358
IPRP +G E PG GK+F+E+ C A L+GRKF
Sbjct: 404 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKF 441
>gi|198432986|ref|XP_002130494.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 2 [Ciona intestinalis]
Length = 472
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 208/361 (57%), Gaps = 36/361 (9%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V Q TR ARR+YVG +P E A+ FF+ M I G + PG ++ V IN +K
Sbjct: 146 VPVAGSQMTRQARRLYVGNIPFGVTEDAMMDFFNNQMQ-IAGLAQAPGQPILAVQINLDK 204
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+V+E + A+A DGI F ++++RRP+DY P L +L QP+ +L G
Sbjct: 205 NFAFLEFRSVDETTQALAFDGINFMNQSLKIRRPSDYKP-LPGSLE--QPAIHLP----G 257
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ S + ++ ++F+GGLP Y + Q+KELL SFG L F+LVKD T SKGY F
Sbjct: 258 VISTVVQDSQ--HKMFIGGLPNYLNDDQVKELLTSFGPLRAFNLVKDSATALSKGYAFAE 315
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH--IAIQKMAL 258
+ D ++TD A A LNG+++GDK L V+RA SI A+ H I I MA
Sbjct: 316 FADYSLTDQAIAGLNGMQLGDKKLIVQRA------------SIGAKNNPHGAIMIPGMAH 363
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
T G G + VLCL + + L DDEEYEEI+ED+++ECGK G++V++
Sbjct: 364 AT------GAGPA------TTVLCLMNMVLPEELTDDEEYEEIMEDVKDECGKLGSVVSL 411
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP E GVGK+++E+ + + A ALSGRKF V ++ ++Y ++ +
Sbjct: 412 EIPRPGPGLTEADGVGKIYVEFANHLDTQKAAQALSGRKFSNRVVVTSFFDPERYHHRQF 471
Query: 379 S 379
S
Sbjct: 472 S 472
>gi|384939340|gb|AFI33275.1| splicing factor U2AF 65 kDa subunit isoform a [Macaca mulatta]
Length = 475
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 210/359 (58%), Gaps = 20/359 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + + L I + LQ
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA------KNATLVSPPSTINQTPVTLQ 359
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G+ + M G +VLCL + + L DDEEYEEI+E++R+EC KYG + ++
Sbjct: 360 VPGLMSSQVQM---GGHPTEVLCLMNMVLPEELLDDEEYEEIVEEVRDECSKYGLVKSIE 416
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 417 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
>gi|351710523|gb|EHB13442.1| Splicing factor U2AF 65 kDa subunit [Heterocephalus glaber]
Length = 904
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/344 (42%), Positives = 207/344 (60%), Gaps = 24/344 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 209 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 267
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 268 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 320
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 321 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 378
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 379 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 433
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 434 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 485
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
IPRP +G E PG GK+F+E+ C A L+GRKF V
Sbjct: 486 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVV 528
>gi|297837403|ref|XP_002886583.1| hypothetical protein ARALYDRAFT_338287 [Arabidopsis lyrata subsp.
lyrata]
gi|297332424|gb|EFH62842.1| hypothetical protein ARALYDRAFT_338287 [Arabidopsis lyrata subsp.
lyrata]
Length = 233
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/247 (53%), Positives = 169/247 (68%), Gaps = 19/247 (7%)
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
+ L+ G +G + EGPDR+FVGGLP+YFT+ QI+E+LE G L GF+L+KDR TG+S
Sbjct: 4 VELSTTGSTTGDL--VEGPDRIFVGGLPHYFTDAQIREILECLGPLRGFNLLKDRQTGDS 61
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI-LAQAQQHIA 252
KGY FCVYQDP+VTDIACAALNG+K+GDKTL VRRA + Q K EQE + AQQ IA
Sbjct: 62 KGYAFCVYQDPSVTDIACAALNGIKIGDKTLAVRRAMQGTIQPKPEQEEVLQQIAQQQIA 121
Query: 253 IQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
+Q++ L+ G+ T K++CL++ +T D L + EEY +I MR+E GK+
Sbjct: 122 LQRLMLEPGGIPT-------------KIVCLSQLVTIDNLRNYEEYADI---MRQEGGKF 165
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
G LVNVVIPRP+ + G TPGVG VFLEY D G + A+ ++GR GG V A YYPEDK
Sbjct: 166 GNLVNVVIPRPNPDHGPTPGVGNVFLEYADVDGSSKARLEMNGRIVGGYQVVAVYYPEDK 225
Query: 373 YFNKDYS 379
Y DY
Sbjct: 226 YAQGDYE 232
>gi|384939342|gb|AFI33276.1| splicing factor U2AF 65 kDa subunit isoform b [Macaca mulatta]
Length = 471
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 213/359 (59%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 360
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+E++R+EC KYG + ++
Sbjct: 361 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEEVRDECSKYGLVKSIE 412
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 413 IPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|321479007|gb|EFX89963.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Daphnia pulex]
Length = 487
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 204/373 (54%), Gaps = 44/373 (11%)
Query: 29 TRHARRVYVGGLP-----PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFA 83
TR ARR+YVG +P A E+ + FF+Q M + G S PG ++ IN +K FA
Sbjct: 136 TRQARRLYVGNIPFGVSDVRAAEEEMMDFFNQQM-HLSGLSQAPGHPILACQINLDKNFA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
F+E R+++E S AMA DGI F+G +++RRP DY+PT G G G++S
Sbjct: 195 FLEFRSIDETSQAMAFDGINFKGQTLKIRRPHDYHPTPGGGGGGGGGG-GGPETTPGMSS 253
Query: 144 GAIGGAEG------------------PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLV 185
G I P ++F+GGLP Y E Q ELL SFG L F+LV
Sbjct: 254 GGITEKRAGGGGGGGGGTMSTIVPDTPHKLFIGGLPNYLNEEQ--ELLMSFGQLRAFNLV 311
Query: 186 KDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILA 245
KD TG SKGY FC Y D VTD A + LNG+++GDK + ++RA+ + + A
Sbjct: 312 KDTATGLSKGYAFCEYADVTVTDQAISGLNGMQLGDKKIIIQRASVGAKNAA-------A 364
Query: 246 QAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDM 305
AQ + IQ G N G G+ +VLCL +T + L DDEEYEEI++D+
Sbjct: 365 YAQMPVQIQ-----VPGFNLAAGP----GQP-TEVLCLLNMVTPEELRDDEEYEEIVDDI 414
Query: 306 REECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNA 365
REEC ++G + +V IPRP + + PGVGKVF+E+ C A+ AL+GRKF V
Sbjct: 415 REECNRHGAVRSVEIPRPLEGVDDVPGVGKVFVEFISVSDCVKAQQALTGRKFANRIVVT 474
Query: 366 FYYPEDKYFNKDY 378
+Y ++Y +D+
Sbjct: 475 SFYEPERYHRRDF 487
>gi|331243454|ref|XP_003334370.1| splicing factor U2AF subunit [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 600
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 199/369 (53%), Gaps = 34/369 (9%)
Query: 25 TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG----GNSAGPG-----DAVVNVY 75
TQ R ARR+YVG + ANE +A FF+ M +G N G + VV V
Sbjct: 216 TQSFARQARRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQ 275
Query: 76 INHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLN 135
+NHEK +AFVE R EEA++ M+ DGIIF+ A+++RRP DY GP P
Sbjct: 276 VNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYT-------GPDHAGPT-- 326
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN--S 193
G+ S + + P+++F+GGLP Y T+ Q+ ELL+SFG L F+LVKD +G S
Sbjct: 327 -HIPGVVSTNV--PDSPNKIFIGGLPSYLTDDQVMELLKSFGELKSFNLVKDTSSGGHVS 383
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KG+ FC Y DP +TDIAC LNG+++GD+ L V+RA K ++ + Q +
Sbjct: 384 KGFAFCEYVDPDLTDIACQGLNGMELGDRYLVVQRAQIGQNAKKEKENNPDGQRNNYNQF 443
Query: 254 QKMA-LQTSGMNTLGGGMSLFGE-TLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
A Q + + GE +VL + + + L DD+EY EILED+R+ECGK
Sbjct: 444 NNFAGGQATAAASSVLAAVKSGEGEKTRVLQMLNMVNQEELVDDQEYGEILEDIRDECGK 503
Query: 312 YGTLVNVVIPRPDQN---------GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNT 362
YG + V IPRP +N G+GKVF+ + CA A A++GR+F G
Sbjct: 504 YGKIEGVRIPRPIKNEKGRIDLKASESVDGLGKVFVMFEKVDECAAALLAIAGRQFAGRV 563
Query: 363 VNAFYYPED 371
+ Y PED
Sbjct: 564 IICAYAPED 572
>gi|393909510|gb|EJD75480.1| hypothetical protein LOAG_17389 [Loa loa]
Length = 502
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 203/361 (56%), Gaps = 39/361 (10%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P +E A+ FF+Q M + G + PG+ V+ +N +K
Sbjct: 178 VPVVGPSVTCQSRRLYVGNIPFGCSEDAMLDFFNQQM-HLCGLAQAPGNPVLACQMNLDK 236
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP-TLAAALGPGQPSPNLNLAAV 139
FAF+E R+++E + MA DGI F G +++RRP DY P + + LG N+
Sbjct: 237 NFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDLG--------NMMVS 288
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+ + P ++F+GGLP Y Q+KELL SFG L F+LV ++ TG SKGY F
Sbjct: 289 NIV------PDSPHKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTEQSTGVSKGYAFA 342
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA-L 258
Y DP++TD A A LNG+++GDK L V+ + A+ A+ ++A +
Sbjct: 343 EYLDPSLTDQAIAGLNGMQLGDKNLVVQLSCAN--------------ARNNVAQNTFPQI 388
Query: 259 QTSGMN-TLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVN 317
Q +G++ + G G +VLCL +T D L DDEEYE+ILED+REEC KYG + +
Sbjct: 389 QVAGIDLSHGAGPP------TEVLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKS 442
Query: 318 VVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKD 377
+ IPR G + GVGKVF+E+ C A+ AL+GRKF TV YY D Y +
Sbjct: 443 LEIPR-SVPGVDVTGVGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDMYHRRQ 501
Query: 378 Y 378
+
Sbjct: 502 F 502
>gi|170575889|ref|XP_001893425.1| U2 auxiliary factor 65 kDa subunit [Brugia malayi]
gi|158600599|gb|EDP37742.1| U2 auxiliary factor 65 kDa subunit, putative [Brugia malayi]
Length = 502
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 203/361 (56%), Gaps = 39/361 (10%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P +E A+ FF+Q M + G + PG+ V+ +N +K
Sbjct: 178 VPVVGPSVTCQSRRLYVGNIPFGCSEDAMLDFFNQQM-HLCGLAQAPGNPVLACQMNLDK 236
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP-TLAAALGPGQPSPNLNLAAV 139
FAF+E R+++E + MA DGI F G +++RRP DY P + + LG N+
Sbjct: 237 NFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDLG--------NMMVS 288
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+ + P ++F+GGLP Y Q+KELL SFG L F+LV ++ TG SKGY F
Sbjct: 289 NIV------PDSPHKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTEQSTGVSKGYAFA 342
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA-L 258
Y DP++TD A A LNG+++GDK L V+ + A+ A+ ++A +
Sbjct: 343 EYLDPSLTDQAIAGLNGMQLGDKNLVVQLSCAN--------------ARNNVAQNTFPQI 388
Query: 259 QTSGMN-TLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVN 317
Q +G++ + G G +VLCL +T D L DDEEYE+ILED+REEC KYG + +
Sbjct: 389 QVAGIDLSHGAGPP------TEVLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKS 442
Query: 318 VVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKD 377
+ IPR G + GVGKVF+E+ C A+ AL+GRKF TV YY D Y +
Sbjct: 443 LEIPR-SVPGVDVTGVGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDMYHRRQ 501
Query: 378 Y 378
+
Sbjct: 502 F 502
>gi|50882018|gb|AAT85577.1| U2 small nuclear ribonucleoprotein auxiliary factor large subunit
[Alvinella pompejana]
Length = 479
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 211/353 (59%), Gaps = 31/353 (8%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ARR+YVG +P E+ + +F+ M + G + G+ V+ ++N +K FAF+E R
Sbjct: 155 SRQARRLYVGNIPFGVTEEMMMDYFNTQMK-MAGLAQAEGNPVIACHVNLDKNFAFLEFR 213
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+V+E + AMA DGI F+G ++++RRP DY P A P ++A G+ S +
Sbjct: 214 SVDETTQAMAFDGINFQGQSLKIRRPKDYQPLPGMAEVP-------SVAVPGVVSTVV-- 264
Query: 149 AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD 208
+ ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKGY FC Y DP++TD
Sbjct: 265 QDSAHKIFIGGLPNYLNEDQVKELLTSFGLLKAFNLVKDSATGLSKGYAFCEYLDPSITD 324
Query: 209 IACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMN---T 265
ACA LNG+++GD+ L V+RA+ + AQ + + LQ G+N
Sbjct: 325 QACAGLNGMQLGDEKLIVQRASVGA-----------KNAQGGPNVLPVQLQIPGLNMAQV 373
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQ 325
G G + +VLCL +T + L D+EEYEEILED++EEC KYG + ++ IPRP +
Sbjct: 374 QGPGPT------TEVLCLMNMVTPEDLEDEEEYEEILEDVKEECSKYGYVKSIEIPRPIK 427
Query: 326 NGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
G E PGVGK+F+E+ + C A+ AL+GRKF V + Y+ D+Y +++
Sbjct: 428 -GVEVPGVGKIFVEFNSVIDCQKAQQALTGRKFSNRVVVSSYFDPDRYHRREF 479
>gi|403175591|ref|XP_003888994.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171670|gb|EHS64431.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 713
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 199/369 (53%), Gaps = 34/369 (9%)
Query: 25 TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG----GNSAG-----PGDAVVNVY 75
TQ R ARR+YVG + ANE +A FF+ M +G N G + VV V
Sbjct: 329 TQSFARQARRLYVGNILHTANEMNVAEFFNAKMKELGLLARNNEDGMAISISENPVVAVQ 388
Query: 76 INHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLN 135
+NHEK +AFVE R EEA++ M+ DGIIF+ A+++RRP DY GP P
Sbjct: 389 VNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDY-------TGPDHAGP--- 438
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN--S 193
G+ S + + P+++F+GGLP Y T+ Q+ ELL+SFG L F+LVKD +G S
Sbjct: 439 THIPGVVSTNV--PDSPNKIFIGGLPSYLTDDQVMELLKSFGELKSFNLVKDTSSGGHVS 496
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KG+ FC Y DP +TDIAC LNG+++GD+ L V+RA K ++ + Q +
Sbjct: 497 KGFAFCEYVDPDLTDIACQGLNGMELGDRYLVVQRAQIGQNAKKEKENNPDGQRNNYNQF 556
Query: 254 QKMA-LQTSGMNTLGGGMSLFGE-TLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
A Q + + GE +VL + + + L DD+EY EILED+R+ECGK
Sbjct: 557 NNFAGGQATAAASSVLAAVKSGEGEKTRVLQMLNMVNQEELVDDQEYGEILEDIRDECGK 616
Query: 312 YGTLVNVVIPRPDQN---------GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNT 362
YG + V IPRP +N G+GKVF+ + CA A A++GR+F G
Sbjct: 617 YGKIEGVRIPRPIKNEKGRIDLKASESVDGLGKVFVMFEKVDECAAALLAIAGRQFAGRV 676
Query: 363 VNAFYYPED 371
+ Y PED
Sbjct: 677 IICAYAPED 685
>gi|402590758|gb|EJW84688.1| hypothetical protein WUBG_04401 [Wuchereria bancrofti]
Length = 477
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 203/361 (56%), Gaps = 39/361 (10%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P +E A+ FF+Q M + G + PG+ V+ +N +K
Sbjct: 153 VPVVGPSVTCQSRRLYVGNIPFGCSEDAMLDFFNQQM-HLCGLAQAPGNPVLACQMNLDK 211
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP-TLAAALGPGQPSPNLNLAAV 139
FAF+E R+++E + MA DGI F G +++RRP DY P + + LG N+
Sbjct: 212 NFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPMSTSYDLG--------NMMVS 263
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+ + P ++F+GGLP Y Q+KELL SFG L F+LV ++ TG SKGY F
Sbjct: 264 NIV------PDSPHKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTEQSTGVSKGYAFA 317
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA-L 258
Y DP++TD A A LNG+++GDK L V+ + A+ A+ ++A +
Sbjct: 318 EYLDPSLTDQAIAGLNGMQLGDKNLVVQLSCAN--------------ARNNVAQNTFPQI 363
Query: 259 QTSGMN-TLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVN 317
Q +G++ + G G +VLCL +T D L DDEEYE+ILED+REEC KYG + +
Sbjct: 364 QVAGIDLSHGAGPP------TEVLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKS 417
Query: 318 VVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKD 377
+ IPR G + GVGKVF+E+ C A+ AL+GRKF TV YY D Y +
Sbjct: 418 LEIPR-SVPGVDVTGVGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDMYHRRQ 476
Query: 378 Y 378
+
Sbjct: 477 F 477
>gi|148697816|gb|EDL29763.1| mCG68163 [Mus musculus]
Length = 472
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 206/360 (57%), Gaps = 24/360 (6%)
Query: 19 MPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINH 78
MPV V+ Q TR ARR+YVG +P E+++ F + M + G + PG+ ++ V IN
Sbjct: 136 MPVPVVGSQMTRQARRLYVGTIPFGITEESMLDFLNTQM-HLRGLTQAPGNPILAVQINL 194
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+K FAF+E R+V+E + A+A DGIIF+G ++++RRP DY P + G PS +
Sbjct: 195 DKNFAFLEFRSVDETTQALAFDGIIFQGQSLKIRRPHDYQPLPGMS---GSPS----VYV 247
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
G+ S + + ++F+GGLP Y + Q+KELL S G L F+LVKD TG SKGY F
Sbjct: 248 PGVVSTIV--PDSAHKLFIGGLPNYLNDDQVKELLTSVGILRAFNLVKDSITGLSKGYAF 305
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y D VTD A A LNG+ +GDK L V+RA+ +K SI+ Q + L
Sbjct: 306 CEYMDINVTDQAIAWLNGMHLGDKKLLVQRASVG---AKNVALSIINQT-------PVTL 355
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
Q G+ + M G VLCL + L DDEEYEEI++D+R+EC KYG + ++
Sbjct: 356 QVPGLTSSQVQM---GGHPTTVLCLMNMVLPKELLDDEEYEEIVDDVRDECNKYGLVKSI 412
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ + C A L+GRKF V Y D Y +++
Sbjct: 413 EIPRP-MDGVEVPGCGKIFVEFTSVIDCQKAMQGLTGRKFANRVVVTKYCDPDSYHGRNF 471
>gi|309266895|ref|XP_003086891.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial [Mus
musculus]
Length = 493
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 206/360 (57%), Gaps = 24/360 (6%)
Query: 19 MPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINH 78
MPV V+ Q TR ARR+YVG +P E+++ F + M + G + PG+ ++ V IN
Sbjct: 157 MPVPVVGSQMTRQARRLYVGTIPFGITEESMLDFLNTQM-HLRGLTQAPGNPILAVQINL 215
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+K FAF+E R+V+E + A+A DGIIF+G ++++RRP DY P + G PS +
Sbjct: 216 DKNFAFLEFRSVDETTQALAFDGIIFQGQSLKIRRPHDYQPLPGMS---GSPS----VYV 268
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
G+ S + + ++F+GGLP Y + Q+KELL S G L F+LVKD TG SKGY F
Sbjct: 269 PGVVSTIV--PDSAHKLFIGGLPNYLNDDQVKELLTSVGILRAFNLVKDSITGLSKGYAF 326
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y D VTD A A LNG+ +GDK L V+RA+ +K SI+ Q + L
Sbjct: 327 CEYMDINVTDQAIAWLNGMHLGDKKLLVQRASVG---AKNVALSIINQT-------PVTL 376
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
Q G+ + M G VLCL + L DDEEYEEI++D+R+EC KYG + ++
Sbjct: 377 QVPGLTSSQVQM---GGHPTTVLCLMNMVLPKELLDDEEYEEIVDDVRDECNKYGLVKSI 433
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ + C A L+GRKF V Y D Y +++
Sbjct: 434 EIPRP-MDGVEVPGCGKIFVEFTSVIDCQKAMQGLTGRKFANRVVVTKYCDPDSYHGRNF 492
>gi|195380577|ref|XP_002049047.1| GJ20975 [Drosophila virilis]
gi|194143844|gb|EDW60240.1| GJ20975 [Drosophila virilis]
Length = 428
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 200/355 (56%), Gaps = 27/355 (7%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
TR ARR+YVG +P ++ + FF++ + + G G+AV+ N +K FAF+E
Sbjct: 96 VTRQARRLYVGNIPFSTTDEDMMAFFNEQIHRLNGTQGHDGNAVLTCQTNLDKNFAFLEF 155
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNP----TLAAALGPGQPSPNLNLAAVGLAS 143
R+++EA+ A+ DGI + G +++RRP DY+P T A + + + ++ + + ++
Sbjct: 156 RSMDEATQAITFDGISYRGQTLKIRRPHDYHPVASITTAEIVEIAKGATQIHASNLPISP 215
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
+ P ++++GGLP E Q+KELL +FG L GF+LVKD TG SKG+ FC Y D
Sbjct: 216 VV---PDSPHKIYIGGLPTCLNEEQVKELLVTFGQLRGFNLVKDTITGQSKGFAFCEYLD 272
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGM 263
P++T+ A A LNG+++GD+ L V+R+ +A + +A Q LQ G
Sbjct: 273 PSITEQAIAGLNGMQLGDRKLVVQRS--------------IAGVRNMVASQLPVLQVPGF 318
Query: 264 NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP 323
+ + +VLCL + L D++EYE+I D+++EC KYG + ++ IPRP
Sbjct: 319 -----PIDVSTCKATEVLCLLNMVLPSELLDNDEYEDIRTDIKQECAKYGKVKSLKIPRP 373
Query: 324 DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+ +T G GKVF+ + C A NALSGRKF G V +Y DKY KD+
Sbjct: 374 IGDPPQT-GCGKVFVRFESIEDCKKALNALSGRKFSGRIVMTSFYDLDKYKRKDF 427
>gi|443731660|gb|ELU16702.1| hypothetical protein CAPTEDRAFT_155651 [Capitella teleta]
Length = 480
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 145/350 (41%), Positives = 209/350 (59%), Gaps = 26/350 (7%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ARR+YVG +P E+ + FF+ M + S G+ V+ +N +K FAF+E R
Sbjct: 157 SRQARRLYVGNIPFGVTEEMMMDFFNTQMK-MAALSQAEGNPVIACQVNLDKNFAFLEYR 215
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+V+E ++AMALDGI F+G ++++RRP DY P A P N+A G+ S +
Sbjct: 216 SVDETTHAMALDGINFQGQSLKIRRPKDYQPLPGIAETP-------NVAVPGVVSTVV-- 266
Query: 149 AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD 208
+ ++F+GGLP Y E Q+KELL SFG L F LVKD TG SKGY FC Y D ++TD
Sbjct: 267 QDSAHKIFIGGLPNYLNEDQVKELLTSFGPLKAFSLVKDSATGLSKGYAFCEYLDISITD 326
Query: 209 IACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGG 268
ACA LNG+++GDK L V+RA+ + + +I++ A + I +A+
Sbjct: 327 QACAGLNGMQLGDKKLIVQRASVGAKNA-----AIISSAPMQMQIPGLAVNP-------- 373
Query: 269 GMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGG 328
M+ G +VLCL + + L D+EEYE+ILED++EEC KYG + ++ IPRP + G
Sbjct: 374 -MAAAGPA-TEVLCLMNMVLPEELEDEEEYEDILEDVKEECSKYGFVKSLEIPRPIK-GV 430
Query: 329 ETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E PGVGK+F+E++ A+NALSGRKF TV Y DKY +++
Sbjct: 431 EVPGVGKIFVEFHSITDSQKAQNALSGRKFANRTVITSYCDPDKYHRREF 480
>gi|328862941|gb|EGG12041.1| hypothetical protein MELLADRAFT_41759 [Melampsora larici-populina
98AG31]
Length = 397
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 199/369 (53%), Gaps = 47/369 (12%)
Query: 25 TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG-----GNSAG----PGDAVVNVY 75
TQ R ARR+YVG + ANE +A FF+ M +G G + VV V
Sbjct: 26 TQSFARQARRLYVGNILHTANEMNVAEFFNAKMKELGLLVRNGEDGSMISISENPVVAVQ 85
Query: 76 INHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALG--PGQPSPN 133
+NHEK +AFVE R EEA++ M+ DGIIF+ A+++RRP DY T + PG S N
Sbjct: 86 VNHEKNYAFVEFRNAEEATHGMSFDGIIFQNQALKIRRPKDYTGTEHTSTNHIPGVVSTN 145
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN- 192
+ + P+++F+GGLP Y T+ Q+ ELL+SFG L F+LVKD +G
Sbjct: 146 V--------------PDSPNKIFIGGLPSYLTDDQVMELLKSFGELKSFNLVKDTSSGGQ 191
Query: 193 -SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI 251
SKG+ FC Y D +TDIAC LNG+++GD+ L V+RA +K E+E+ +
Sbjct: 192 VSKGFAFCEYVDSDLTDIACQGLNGMELGDRYLVVQRAQIGQ-NAKKEKENAEGAGGAGM 250
Query: 252 AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
+ +G N G KVL + + + L DDEEY+EILED++EEC K
Sbjct: 251 GVGGF----NGTNRASEG------ERTKVLQMLNMVNPEELVDDEEYKEILEDIKEECSK 300
Query: 312 YGTLVNVVIPRPDQN---------GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNT 362
YG + +V IPRP +N G+GKVF+++ CA A +A++GR+F G
Sbjct: 301 YGQIEDVKIPRPAKNEKGRMDLKSSESIEGLGKVFIKFERIEDCAQALSAIAGRQFAGRV 360
Query: 363 VNAFYYPED 371
+ Y ED
Sbjct: 361 IICAYASED 369
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 206/360 (57%), Gaps = 24/360 (6%)
Query: 19 MPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINH 78
MPV V+ Q TR ARR+YVG +P E+++ F + M + G + PG+ ++ V IN
Sbjct: 394 MPVPVVGSQMTRQARRLYVGTIPFGITEESMLDFLNTQM-HLRGLTQAPGNPILAVQINL 452
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+K FAF+E R+V+E + A+A DGIIF+G ++++RRP DY P + G PS +
Sbjct: 453 DKNFAFLEFRSVDETTQALAFDGIIFQGQSLKIRRPHDYQPLPGMS---GSPS----VYV 505
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
G+ S + + ++F+GGLP Y + Q+KELL S G L F+LVKD TG SKGY F
Sbjct: 506 PGVVSTIV--PDSAHKLFIGGLPNYLNDDQVKELLTSVGILRAFNLVKDSITGLSKGYAF 563
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y D VTD A A LNG+ +GDK L V+RA+ +K SI+ Q + L
Sbjct: 564 CEYMDINVTDQAIAWLNGMHLGDKKLLVQRASVG---AKNVALSIINQT-------PVTL 613
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
Q G+ + M G VLCL + L DDEEYEEI++D+R+EC KYG + ++
Sbjct: 614 QVPGLTSSQVQM---GGHPTTVLCLMNMVLPKELLDDEEYEEIVDDVRDECNKYGLVKSI 670
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ + C A L+GRKF V Y D Y +++
Sbjct: 671 EIPRP-MDGVEVPGCGKIFVEFTSVIDCQKAMQGLTGRKFANRVVVTKYCDPDSYHGRNF 729
>gi|358338608|dbj|GAA57078.1| splicing factor U2AF large subunit [Clonorchis sinensis]
Length = 518
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 203/351 (57%), Gaps = 20/351 (5%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R ARR+YVG +P A E+ + FF++ M A G A G ++ V IN EK FAF+E R+
Sbjct: 186 RQARRLYVGNIPFTATEENMMEFFNKQMRAQGLVQAE-GSPIIAVQINMEKNFAFLEFRS 244
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
V+E + +ALDGI+F A+++RRP DY P + P P G+ S +
Sbjct: 245 VDETTQGLALDGILFHNQALKLRRPRDYAPLPGVSETPSVIVP-------GVVSTVV--Q 295
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ P +VFVGGLP Y E Q+KELL SFG L GF+LVKD TG SKGY FC Y DP VTD
Sbjct: 296 DSPHKVFVGGLPNYLNEDQVKELLLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDPNVTDH 355
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGG 269
ACA LNG+++GDK L V+RA+ + + T L Q + +Q NT G G
Sbjct: 356 ACAGLNGMQLGDKKLIVQRASVGAKHNATTAAPALLQLP---GLTDTLVQ----NTTGTG 408
Query: 270 MSLF--GETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNG 327
G +VLCL I L DDEEYE+I+ED+R EC KYG + ++ IPRP + G
Sbjct: 409 NITIRSGGPPTEVLCLMNMIDPAELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIR-G 467
Query: 328 GETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E PGVGK+++E+ + C A AL+GRKF V ++ D Y +++
Sbjct: 468 VEVPGVGKIYVEFASLIDCQKAATALTGRKFNQRLVVTSFFNPDNYHRREF 518
>gi|389745686|gb|EIM86867.1| hypothetical protein STEHIDRAFT_57258 [Stereum hirsutum FP-91666
SS1]
Length = 417
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 200/368 (54%), Gaps = 32/368 (8%)
Query: 14 GAFPLMPVQV------MTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P MPVQ + +R +RR+Y+G + P EQ + FF+ M + + P
Sbjct: 39 GLPPPMPVQTFGMGMGVNPNLSRQSRRLYIGSITPDITEQNLTDFFNSKMIEMNIGTGAP 98
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY G
Sbjct: 99 GPPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFVNGPLKIRRPKDYG-------GM 151
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
P+P L++ G+ S + + P ++FVGGLP Y E Q+ ELL+SFG L F+LV++
Sbjct: 152 EMPAPPLHVP--GVVSTNV--PDSPHKIFVGGLPSYLNEEQVMELLKSFGDLKAFNLVRE 207
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT--ASSGQSKTEQESILA 245
G SKG+ F Y DP VTD+A +L+G+++GD+ L V+RA+ A +GQ
Sbjct: 208 NGNGPSKGFAFFEYVDPEVTDVAIQSLSGMELGDRYLVVQRASVGAKAGQPGMPN----L 263
Query: 246 QAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDM 305
Q I + L G S +++L + +T + L DD EY ++LED+
Sbjct: 264 PYDQFPEIPR--------PILPAGASDLSSANSRILLMLNMVTPEDLIDDSEYADLLEDI 315
Query: 306 REECGKYGTLVNVVIPRPD-QNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVN 364
REE YG + +V IPRPD Q E GVG+V++ Y DA G A AL+GR F G ++
Sbjct: 316 REEVANYGDVDDVRIPRPDAQRADEAAGVGRVYVRYKDAEGAAKGMQALAGRSFAGRSII 375
Query: 365 AFYYPEDK 372
A ED
Sbjct: 376 ATVLSEDS 383
>gi|299470773|emb|CBN79819.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 636
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 221/404 (54%), Gaps = 57/404 (14%)
Query: 25 TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAF 84
+ Q TRHARR+Y+GG P E+ +++FF++V+ G AV +VY++ EK FAF
Sbjct: 239 SNQQTRHARRLYIGGCPK-TTEEEMSSFFNEVINRALEYPID-GGAVASVYVSQEKAFAF 296
Query: 85 VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASG 144
+E++T+E A++ + LDGI+++ +++RRP+DYNP L A P P LNL+ +G+ S
Sbjct: 297 LELKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVPAAS--GPIPKLNLSVLGIISS 354
Query: 145 AIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDP 204
+ ++ ++VF+GGLPY TE Q++ELL +FG L F LV+D + SKGYGFC Y +
Sbjct: 355 TVPDSD--NKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNA 412
Query: 205 AVTDIACAALNGLKMGDKTLTVRRAT--ASSG---------------------------- 234
VT IAC L+G+ +GDKTLTVR AT SSG
Sbjct: 413 GVTAIACEGLHGMTLGDKTLTVRPATDRGSSGGQQQQQQQQQQQQHYQQQAMPGMQMGGG 472
Query: 235 ------QSKTEQESI-LAQAQ-------QHIAIQKMALQTSGMNTLGGGMSLFGETLAKV 280
T+QE + LAQA A+ +A +G S L +
Sbjct: 473 QQMGLTAPPTQQEQMQLAQAMAALDPNASQAAMASLAQGGAGAVPSAAAESAVAANLIRA 532
Query: 281 LCLTEA------ITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
+ T +T L D +EYE+I++D+++EC +GT++++++PRP + + VG
Sbjct: 533 IPPTRVLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGE-ADASRAVG 591
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
KVF+EY A +L+GR+FG N V Y E+K+ +++
Sbjct: 592 KVFVEYDTKDSAQKAALSLAGRQFGANIVKVEYLNEEKFARREF 635
>gi|195124159|ref|XP_002006561.1| GI21125 [Drosophila mojavensis]
gi|193911629|gb|EDW10496.1| GI21125 [Drosophila mojavensis]
Length = 427
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 199/352 (56%), Gaps = 24/352 (6%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
TR ARR+YVG +P ++ + FF++ + + G + G+AV+ N +K FAF+E R
Sbjct: 97 TRQARRLYVGNIPFSTTDEDMMAFFNEQINRLNGTNGVDGNAVLTCQTNLDKNFAFLEFR 156
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+++EA+ A+ DGI++ G +++RRP DY+P A++ + + +A + S I
Sbjct: 157 SMDEATQAINFDGILYRGQTLKIRRPHDYHPM--ASVSSSEAADAAKGSATHVNSVPISP 214
Query: 149 --AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
+ P +++VGGLP E Q+KELL +FG L GF+LVK+ TG SKG+ FC Y DP +
Sbjct: 215 MVPDSPHKIYVGGLPTCLNEEQVKELLVTFGKLRGFNLVKEAVTGQSKGFAFCEYVDPCI 274
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
T+ A A LNG+++GD+ L V+R+ +A + +A Q LQ G
Sbjct: 275 TEQAIAGLNGMQLGDRKLIVQRS--------------IAGVRNLVANQLPVLQVPGF--- 317
Query: 267 GGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN 326
+ + +VLCL + L DD+EY++I D+++EC KYG + ++ IPRP +
Sbjct: 318 --PVDVSTGKATEVLCLLNMVLPSELTDDDEYDDIRTDIKQECAKYGKVKSLKIPRPGDD 375
Query: 327 GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+ G GKVF+ + C A NALSGRKF G V +Y +KY KD+
Sbjct: 376 SIQG-GCGKVFVRFESIDDCKKALNALSGRKFSGRIVMTSFYDLEKYKRKDF 426
>gi|440900150|gb|ELR51345.1| Splicing factor U2AF 65 kDa subunit, partial [Bos grunniens mutus]
Length = 411
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 207/359 (57%), Gaps = 23/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 75 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 133
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 134 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 186
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 187 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 244
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 245 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA-----KNATLSTINQTPVTLQVPGLM 299
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+ECGKYG + ++
Sbjct: 300 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSIE 351
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPR ++F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 352 IPRQAWVFTSLILFLQIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 410
>gi|226478958|emb|CAX72974.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
Length = 520
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 206/351 (58%), Gaps = 20/351 (5%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R ARR+YVG +P A E+ + FF++ M A G A G+ ++ V IN EK FAF+E R+
Sbjct: 188 RQARRLYVGNIPFTATEENMMEFFNKQMRAQGLIQA-EGNPIIAVQINMEKNFAFLEFRS 246
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
V+E + +ALDG++F+ A+++RRP DY P + P P G+ S +
Sbjct: 247 VDETTQGLALDGVLFQNQALKLRRPRDYAPLPGVSEQPSVIVP-------GVVSTVV--Q 297
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ P ++FVGGLP Y E Q+KELL SFG L GF+LVKD TG SKGY FC Y D VTD
Sbjct: 298 DSPHKIFVGGLPNYLNEDQVKELLLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDSNVTDH 357
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGG 269
ACA LNG+++GDK L V+RA+ + + L Q +++ A+Q NT G G
Sbjct: 358 ACAGLNGMQLGDKKLIVQRASVGAKHTTGVLPQCLLQMS---GLEEGAVQ----NTTGSG 410
Query: 270 --MSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNG 327
G +VLCL I L DDEEYE+I+ED+R EC KYG + ++ IPRP + G
Sbjct: 411 NLTVRSGGPPTEVLCLMNMIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIR-G 469
Query: 328 GETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+ PGVGK+++E+ + C A AL+GRKF V ++ + Y +++
Sbjct: 470 IDVPGVGKIYVEFASLIDCQKAATALTGRKFNQRLVVTSFFSPNSYHRREF 520
>gi|195489053|ref|XP_002092574.1| GE11595 [Drosophila yakuba]
gi|194178675|gb|EDW92286.1| GE11595 [Drosophila yakuba]
Length = 437
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 201/360 (55%), Gaps = 33/360 (9%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIG--GNSAGPGDAVVNVYINHEKKFAFVE 86
TR ARR+YVG +P E+ + FF+Q + A+G G G AV+ N EK FAF+E
Sbjct: 98 TRQARRLYVGNIPFGVTEEEMMEFFNQQLMALGLEGAQYLDGKAVLTCQTNLEKNFAFLE 157
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
R+++EA+ A+ DGIIF G +++RRP DY P + + + + L A + I
Sbjct: 158 FRSMDEATQALNFDGIIFRGQILKIRRPHDYQPVPSIRVSNMESYRSFRLPATTTTNPPI 217
Query: 147 GG-------AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+ P++++VGGLP + QIK+LL+SFG L G +LVKD +T SKG+ F
Sbjct: 218 STIAVSSIVPDSPNKIYVGGLPTCLDQDQIKDLLQSFGELKGLNLVKDINTSLSKGFAFF 277
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y DP+VTD A A L+G+++GD+ L V+R+ + + +++Q+ +Q
Sbjct: 278 EYIDPSVTDHAIAGLHGMQLGDRRLVVQRS--------------IPGGKNGLSVQQPIVQ 323
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G++TL L + ++LCL + + L D+EE+E+I D+++EC KYG + ++
Sbjct: 324 VPGISTL-----LDPGSPTEILCLLNMVLPEELLDNEEFEDIRSDIKQECAKYGDVRSIK 378
Query: 320 IPRPDQNGGETP--GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKD 377
IPRP G+ P G GKVF+++ A ALSGRKF G V +Y DKY D
Sbjct: 379 IPRP---VGQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSFYDPDKYLQDD 435
>gi|256074204|ref|XP_002573416.1| splicing factor u2af large subunit [Schistosoma mansoni]
gi|238658595|emb|CAZ29648.1| splicing factor u2af large subunit, putative [Schistosoma mansoni]
Length = 521
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 205/352 (58%), Gaps = 22/352 (6%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R ARR+YVG +P A E+ + FF++ M A G A G+ ++ V IN EK FAF+E R+
Sbjct: 189 RQARRLYVGNIPFTATEENMMEFFNKQMRAQGLIQAE-GNPIIAVQINMEKNFAFLEFRS 247
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
V+E + +ALDG++F+ A+++RRP DY P + P P G+ S +
Sbjct: 248 VDETTQGLALDGVLFQNQALKLRRPRDYAPLPGVSEQPSVIVP-------GVVSTVV--Q 298
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ P ++FVGGLP Y E Q+KELL SFG L GF+LVKD TG SKGY FC Y D VTD
Sbjct: 299 DSPHKIFVGGLPNYLNEDQVKELLLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDANVTDH 358
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI-AIQKMALQTSGMNTLGG 268
ACA LNG+++GDK L V+RA+ + + +L Q + ++ +Q NT G
Sbjct: 359 ACAGLNGMQLGDKKLIVQRASVGAKHTT----GVLPQTLLSLPGLEDGTVQ----NTTGS 410
Query: 269 GMSLF--GETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN 326
G G +VLCL I L DDEEYE+I+ED+R EC KYG + ++ IPRP
Sbjct: 411 GNITIRSGGPPTEVLCLMNMIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIP- 469
Query: 327 GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
G E PGVGK+++E+ + C A AL+GRKF V ++ D Y +++
Sbjct: 470 GVEVPGVGKIYVEFASLIDCQKAATALTGRKFNQRLVVTSFFSPDNYHRREF 521
>gi|226483519|emb|CAX74060.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
gi|226483521|emb|CAX74061.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
Length = 518
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 205/352 (58%), Gaps = 22/352 (6%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R ARR+YVG +P A E+ + FF++ M A G A G+ ++ V IN EK FAF+E R+
Sbjct: 186 RQARRLYVGNIPFTATEENMMEFFNKQMRAQGLIQA-EGNPIIAVQINMEKNFAFLEFRS 244
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
V+E + +ALDG++F+ A+++RRP DY P + P P G+ S +
Sbjct: 245 VDETTQGLALDGVLFQNQALKLRRPRDYAPLPGVSEQPSVIVP-------GVVSTVV--Q 295
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ P ++FVGGLP Y E Q+KELL SFG L GF+LVKD TG SKGY FC Y D VTD
Sbjct: 296 DSPHKIFVGGLPNYLNEDQVKELLLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDANVTDH 355
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI-AIQKMALQTSGMNTLGG 268
ACA LNG+++GDK L V+RA+ + + +L Q + ++ +Q NT G
Sbjct: 356 ACAGLNGMQLGDKKLIVQRASVGAKHTT----GVLPQTLLSLPGLEDGTVQ----NTTGS 407
Query: 269 GMSLF--GETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN 326
G G +VLCL I L DDEEYE+I+ED+R EC KYG + ++ IPRP
Sbjct: 408 GNITIRSGGPPTEVLCLMNMIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIP- 466
Query: 327 GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
G E PGVGK+++E+ + C A AL+GRKF V ++ D Y +++
Sbjct: 467 GVEVPGVGKIYVEFASLIDCQKAATALTGRKFNQRLVVTSFFSPDNYHRREF 518
>gi|392572624|gb|EIW65769.1| hypothetical protein TREMEDRAFT_41238 [Tremella mesenterica DSM
1558]
Length = 596
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 196/368 (53%), Gaps = 55/368 (14%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R A+R+YVGG+ + ++ FF+ M+ G PGD + V +NHEK FAF+E R+
Sbjct: 230 RQAKRIYVGGITESMTDASLLEFFNTTMSERGFTLEIPGDPIGAVQVNHEKAFAFLEFRS 289
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
EEAS+A+ LD ++FE V +RV+RP DY L P Q + GA +
Sbjct: 290 AEEASSALKLDNVMFEDVPLRVKRPKDYT-----GLDPLQHT----------MGGAQAMS 334
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ P+++F+GGLP Y E Q+ ELL+SFG L F+LVKD D+ +KG+ F Y DP+ TD+
Sbjct: 335 DSPNKLFIGGLPTYLDEAQVMELLKSFGELRSFNLVKDPDSSENKGFAFAEYTDPSNTDM 394
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKTE----QESILAQAQQHIAIQKMALQTSGMNT 265
A + LN +GD+ L V+RA T+ ES LA++ AI Q SG
Sbjct: 395 AISGLNNFSLGDRILVVQRAAVGRASGTTDAIPGSESFLAKS----AIFAQENQQSG--- 447
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP-D 324
++V+ L +TAD L DD+EY+EILED+ EC ++G + V +PRP
Sbjct: 448 ----------PTSRVMLLLNMVTADELYDDQEYQEILEDITSECSRFGEIEGVRVPRPVP 497
Query: 325 QNGGETP------------------GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAF 366
++ P GVG+VF+ Y D A N+L GR+FGG T+
Sbjct: 498 KSKKWEPSESAVVTQERARRADLAAGVGRVFVMYKDLASTEKAMNSLGGRQFGGRTIVVA 557
Query: 367 YYPEDKYF 374
PE+++
Sbjct: 558 NVPEEEFL 565
>gi|426244214|ref|XP_004015921.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Ovis aries]
Length = 471
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 207/360 (57%), Gaps = 27/360 (7%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 137 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 195
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 196 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 248
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + G+ ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 249 GVVSTVVPGSA--HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 306
Query: 200 VYQDPAVTD-IACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
Y D VTD ++ A + +G R A +SS + T Q + +Q L
Sbjct: 307 EYVDINVTDQVSPAPAHPALLGSPLRAGRGACSSSPFASTIN-------QTPVTLQVPGL 359
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+ECGKYG + ++
Sbjct: 360 MSSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSI 411
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 412 EIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 470
>gi|384496094|gb|EIE86585.1| hypothetical protein RO3G_11296 [Rhizopus delemar RA 99-880]
Length = 502
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 193/359 (53%), Gaps = 38/359 (10%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P Q M + ++++YVG +P +E + FF+ + + VV V INHE
Sbjct: 182 PPQRMEDATPKQSKKLYVGQIPSTTDEVTLCDFFNATIRHELQDKT----PVVGVQINHE 237
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E T ++A+ M LDGI F+G +++RRP Y P P + P
Sbjct: 238 KNFAFIEFHTSQQATACMVLDGISFQGNTLKIRRPNHYQP-------PEEQVP------- 283
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
GL++ + P++VFVGGLP Y T+ Q+ ELL SFG L F+LVKD TG +KG+ FC
Sbjct: 284 GLSTNV---PDTPNKVFVGGLPVYLTDNQVMELLTSFGELRAFNLVKDTATGANKGFAFC 340
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y DP+VTD+AC LNG+++GDK L V+RA+ + +HI M+
Sbjct: 341 EYADPSVTDLACQGLNGMELGDKKLIVQRASVGA---------------KHIPPDYMSGP 385
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
N + S E +VL L ++ + L DDEEY++I ED+ EEC K+G +V++
Sbjct: 386 ILPANYV-PVTSAKEEDATRVLQLMNMVSPEELEDDEEYQDIWEDIAEECAKFGNIVDMK 444
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IP+P Q + PG G +F+ Y A AL+GRKF TV A + E Y + ++
Sbjct: 445 IPKP-QKDQQVPGCGLIFVRYETTDETLAALRALAGRKFADRTVVATFVDEQNYLSDNF 502
>gi|344277364|ref|XP_003410472.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Loxodonta
africana]
Length = 471
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 24/359 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV + Q TR ARR+YVG +P E+A+ FF+ + +G + PG+ ++ V IN +
Sbjct: 136 PVPMGGSQMTRKARRLYVGNIPFGITEEAMMDFFN-IQMRLGVLTQAPGNPILAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + A ALDGIIF+G ++++RRP DY P + S NL+
Sbjct: 195 KNFAFLEFRSVDETTQATALDGIIFQGQSLKIRRPHDYQPLPSM-------SENLSAYMA 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+AS + ++ ++F+ GLP Y + Q+KELL SFG L F LVKD TG SKGY C
Sbjct: 248 GVASTVVPDSD--HKLFIEGLPTYLNDDQVKELLTSFGPLKAFSLVKDSATGLSKGYAVC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D TD A A LNG+++GDK L V R + + + + Q ++ +Q
Sbjct: 306 EYVDINDTDQATAGLNGMQLGDKKLLVLRGSVGAKNGTLSTINQVPVTPQVPGLRSSQVQ 365
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
G T +VLCL + + L DDEEYEEI+ED+REEC KYG + ++
Sbjct: 366 MGGHPT-------------EVLCLMNMVLPEELLDDEEYEEIMEDVREECSKYGLVKSME 412
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y ++D+
Sbjct: 413 IPRP-VDGVEVPGCGKIFVEFTTVFDCQKAMQGLTGRKFANRVVVTKYCDLDSYHHRDF 470
>gi|430813569|emb|CCJ29085.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 545
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 198/364 (54%), Gaps = 36/364 (9%)
Query: 14 GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN 73
GA + Q + +R +RR++VG +P +E+ + FF+ M+ + ++G + V++
Sbjct: 210 GAMNIPNPQALQPLQSRQSRRIHVGNIPQPIDEEHLVNFFNDTMSCLNVTTSG-DNPVIS 268
Query: 74 VYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY----NPTLAAALGPGQ 129
+NHEK +AF+E R E+A+ A+ DGI + ++++RRP DY PT + PG
Sbjct: 269 AQVNHEKGYAFLEFRQPEDATVAIGFDGISYMNNSLKIRRPMDYIVPQMPTDDGSYVPGV 328
Query: 130 PSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRD 189
S N + P+++ +GGLP Y + Q+ ELL+SFG L F+L+KD
Sbjct: 329 ISTNF--------------TDTPNKIHIGGLPTYLDDEQVIELLKSFGELKAFNLIKDAA 374
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ 249
T SKG+ FC Y DP VTDIAC LNG+++GDK L V+RA+ T+Q+ I
Sbjct: 375 TNESKGFAFCEYVDPDVTDIACEGLNGMELGDKILVVKRASIG-----TKQKPISTSGGG 429
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
+I +A + + +VL + +T + L DD+EYEEI ED+R+EC
Sbjct: 430 IASITMLAEEEGQLRP------------TRVLQMFNMVTPEELQDDDEYEEISEDIRDEC 477
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
KYG ++++ IPR GVGKV++ + + C A L+GRKF TV +YP
Sbjct: 478 SKYGKVLDLKIPRGIGGSRSNFGVGKVYVRFETEMSCLKAMKDLAGRKFSDRTVLTSFYP 537
Query: 370 EDKY 373
E+ Y
Sbjct: 538 EENY 541
>gi|443898020|dbj|GAC75358.1| splicing factor U2AF, large subunit [Pseudozyma antarctica T-34]
Length = 699
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 216/394 (54%), Gaps = 42/394 (10%)
Query: 3 QNMLPFGATQLGAFPLMPVQVM-TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
Q PF P Q + T + R ARR+YVG + ANE ++ FF++ M +
Sbjct: 298 QGQPPFAGQYQQGHPASHNQALATADSGRQARRLYVGNITHQANEPSMVAFFNEQMLKLK 357
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTL 121
+ PG+ V+ +N +K +AFVE R +EA+NAM+ DGI+F+G ++++RRP DY
Sbjct: 358 LGTE-PGEPAVSAQVNVDKGYAFVEFRHPDEATNAMSFDGIVFQGQSLKIRRPKDYT--- 413
Query: 122 AAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHG 181
GP P+ ++ G+ S + + P ++FVGGLP Y T+ Q+ ELL++FG L
Sbjct: 414 ----GPDVRPPS-SIHVPGVISTNV--PDSPFKIFVGGLPTYLTDDQVIELLQAFGELRS 466
Query: 182 FDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQE 241
F+LVKD T SKG+ FC Y D A+TD+AC LNG+++GD+ L V+RA+ S ++
Sbjct: 467 FNLVKDPATNASKGFAFCEYVDTALTDLACQGLNGMELGDRNLVVQRASVGS------EK 520
Query: 242 SILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEI 301
A A + + + +S G G GE + ++ L +T + L DDEEY +I
Sbjct: 521 KAQAIAAYGANVGALGVPSSVQQFAGAGGDA-GEPTSCMVMLN-MVTPEELQDDEEYADI 578
Query: 302 LEDMREECGKYGTLVNVVIPRP--------------DQNG--------GETPGVGKVFLE 339
+ED+R+EC K+GT+ +V +PRP QN E GVG+V++
Sbjct: 579 VEDIRDECTKFGTVNDVRVPRPAKESKGAAAHQWKRSQNDEAADAGKPSEREGVGRVYVR 638
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y + CA A +++GR+FGG TV + ED +
Sbjct: 639 YAETDQCAQALKSIAGRQFGGRTVICAFLKEDDW 672
>gi|395331854|gb|EJF64234.1| hypothetical protein DICSQDRAFT_144911 [Dichomitus squalens
LYAD-421 SS1]
Length = 587
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 204/382 (53%), Gaps = 48/382 (12%)
Query: 14 GAFPLMPVQV------MTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P MPV + +R +RR+Y+G + P NEQ + FF+ M + + P
Sbjct: 206 GLPPPMPVSTFGMGTGVNPNLSRQSRRLYIGSITPDINEQNLTDFFNSKMKEMNLGTGAP 265
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G+ V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY GP
Sbjct: 266 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLNGPLKIRRPKDYG-------GP 318
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
+PN+++ G+ S + + +++FVGGLP Y E Q+ ELL SFG L F+LV++
Sbjct: 319 DVIAPNMHVP--GVVSTNV--PDSANKIFVGGLPTYLNEEQVMELLSSFGELKAFNLVRE 374
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
G SKG+ F Y DP+VTD+A +L+G+++GDK L V+RA+ +K Q I
Sbjct: 375 NGNGPSKGFAFFEYVDPSVTDVAIQSLSGMELGDKYLVVQRASVG---AKPGQSPIPGMY 431
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
+ I K L ++ E+ ++L + + + L DD+EY +ILED++E
Sbjct: 432 DLNPEIPKPILPVGDLS----------ESQDRILLMLNMVVPEELQDDQEYADILEDVKE 481
Query: 308 ECGKYGTLVNVVIPRP------------------DQNGGETPGVGKVFLEYYDAVGCATA 349
ECGKYG + ++ IPRP Q E GVG+V+++Y A A
Sbjct: 482 ECGKYGEVEDLRIPRPVKKDKAKWGEGGRDSALAQQRADEAAGVGRVYVKYASPRSAANA 541
Query: 350 KNALSGRKFGGNTVNAFYYPED 371
AL+GR F G ++ A +D
Sbjct: 542 LKALAGRSFAGRSIIATLLSDD 563
>gi|302854386|ref|XP_002958701.1| hypothetical protein VOLCADRAFT_121741 [Volvox carteri f.
nagariensis]
gi|300255941|gb|EFJ40221.1| hypothetical protein VOLCADRAFT_121741 [Volvox carteri f.
nagariensis]
Length = 294
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/336 (41%), Positives = 196/336 (58%), Gaps = 44/336 (13%)
Query: 45 NEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIF 104
+E ++ F+ VM A G + PG V++ Y+N+EK+FAF+E R+VEE SNAMA DG+
Sbjct: 2 SEVSLTQLFNNVMMAAGATTQ-PGGPVISCYMNNEKRFAFLEFRSVEETSNAMAFDGLQC 60
Query: 105 EGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYF 164
+G ++VRRP DYNP A LGP +PS +NLA +G+ + + +GP++VFVGGLP Y
Sbjct: 61 QGETLKVRRPHDYNPAAAKLLGPTEPSAKINLALLGVVNTLV--EDGPNKVFVGGLPGYL 118
Query: 165 TETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTL 224
+E Q++++L++FG L F+LV DRDTG SKGYGFC Y DP +TD+A L+ L +G K L
Sbjct: 119 SEEQVRQILQAFGPLRAFNLVTDRDTGASKGYGFCEYADPNITDVAIQGLSALIVGGKPL 178
Query: 225 TVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLT 284
TVRRA ++G++ ++++ Q Q +
Sbjct: 179 TVRRAN-TAGEASATLQTLIQQQQAAL--------------------------------- 204
Query: 285 EAITADALADDEEYEEILEDMREECGKYGTLVNVVI-PRPDQNGGETPGVGKVFLEYYDA 343
L DD EY +++ED+ +E GKYG LV V I P G + PGVG V+L Y D
Sbjct: 205 ------DLVDDGEYMDLMEDVTQEVGKYGKLVGVEIPRPPPDGGPDPPGVGFVYLCYEDP 258
Query: 344 VGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
G A+ AL+GRKFG N A +Y ++ KD S
Sbjct: 259 RGAERAQVALNGRKFGDNLAEATFYDRSRFDAKDLS 294
>gi|302685922|ref|XP_003032641.1| hypothetical protein SCHCODRAFT_75908 [Schizophyllum commune H4-8]
gi|300106335|gb|EFI97738.1| hypothetical protein SCHCODRAFT_75908 [Schizophyllum commune H4-8]
Length = 556
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 130/357 (36%), Positives = 202/357 (56%), Gaps = 44/357 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R +RR+Y+G + P NE +A FF+ MT + + GPG+ V+ V N+EK +AFVE R
Sbjct: 190 SRQSRRLYIGSITPEINEHNLAEFFNSKMTEMNIGTGGPGNPVLAVQCNYEKNYAFVEFR 249
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+ ++A+ AMA DGIIF +++RRP DY+ ++A+A P +++ G+ S +
Sbjct: 250 SADDATAAMAFDGIIFLNGPLKIRRPKDYDISVASA-------PMIHVP--GIISTNV-- 298
Query: 149 AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK-GYGFCVYQDPAVT 207
+ +++FVGGLP Y E Q++ELL SFG L F+LV++ TG SK GY F Y DP VT
Sbjct: 299 PDSANKIFVGGLPAYLNEEQVQELLTSFGELKAFNLVRETGTGASKQGYAFFEYVDPNVT 358
Query: 208 DIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLG 267
D+A +LNG+++GD+ L V+RA+ + A+ AI K + +T G
Sbjct: 359 DVAIQSLNGMELGDRFLVVQRASVGAKDGTIPN----LPAELMPAIPKPIMPAGQTDTSG 414
Query: 268 GGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP---- 323
A+VL + +T D L DD+EY ++LED++EEC K+G + ++ +PRP
Sbjct: 415 D---------ARVLLMLNMVTPDDLVDDDEYGDLLEDIKEECSKFGPVEDLRVPRPVKKE 465
Query: 324 ---------------DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNA 365
Q E GVG+V++++ DA A A +L+GR F G ++ A
Sbjct: 466 KKWAPGEGGREAAVEAQRADEAAGVGRVYVKFVDAKDAAVALKSLAGRSFAGRSIIA 522
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 195/368 (52%), Gaps = 35/368 (9%)
Query: 14 GAFPLMPVQVM------TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P MPVQ +R +RR+Y+G + P NEQ +A FF+ M + + GP
Sbjct: 4 GLPPPMPVQSFGMGIGGNPNLSRQSRRLYIGSITPEVNEQNLADFFNSKMIEMSIGTGGP 63
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G+ V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY
Sbjct: 64 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYG--------- 114
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPD---RVFVGGLPYYFTETQIKELLESFGTLHGFDL 184
+ +A+ G+ + PD ++FVGGLP Y E Q+ ELL+SFG L F+L
Sbjct: 115 -----GMEIASPGVHVPGVVSTNVPDSINKIFVGGLPTYLNEEQVMELLKSFGDLKAFNL 169
Query: 185 VKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESIL 244
V++ G SKG+ F Y D VTD+A +LNG+++GD+ L V+R AS G I
Sbjct: 170 VRENGNGPSKGFAFFEYVDVGVTDVAIQSLNGMELGDRYLVVQR--ASVGAKPGTPGMIP 227
Query: 245 AQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILED 304
+ +G + T +++L + +T D L DD+EY ++ ED
Sbjct: 228 NLPYDQFPEIPRPIMPAGKDP---------ATDSRILLMLNMVTPDDLTDDQEYGDLYED 278
Query: 305 MREECGKYGTLVNVVIPRPDQ-NGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
++EEC YG + ++ IPRPD E GVG+V+++Y D+ A N L+GR F G ++
Sbjct: 279 VKEECSNYGAVEDLRIPRPDAVRLDEASGVGRVYVKYKDSESATAALNNLAGRSFAGRSI 338
Query: 364 NAFYYPED 371
A ED
Sbjct: 339 IATLLSED 346
>gi|195393580|ref|XP_002055432.1| GJ19364 [Drosophila virilis]
gi|194149942|gb|EDW65633.1| GJ19364 [Drosophila virilis]
Length = 476
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 208/417 (49%), Gaps = 72/417 (17%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M +G A G V+ I
Sbjct: 77 PQTAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAA-GSPVLACQI 135
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT---------------- 120
N +K FAF+E R+++E + AMA DGI +G +++RRP DY P
Sbjct: 136 NLDKNFAFLEFRSIDETTQAMAFDGINLKGQDLKIRRPHDYQPMPGITDTPAVKPAVVSS 195
Query: 121 -LAAALGPGQPS-------PN--------------LNLAAVGLAS-----GAIGGAEGPD 153
+ + + P P PN L++ A + GAI E
Sbjct: 196 GVISTVVPDSPHKIFIGGLPNYLNDEQKEFTLNAFLDIGACKKVTPHTNTGAIASLEVDP 255
Query: 154 RVF------------VGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
R+ L T +KELL SFG L F+LVKD TG SKGY FC Y
Sbjct: 256 RIVNLIDELLIRRTVKASLGSSATSRFVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEY 315
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D ++TD + A LNG+++GDK L V+RA+ + ++ + Q + LQ
Sbjct: 316 VDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANT----------SQSVMLQVP 365
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
G++T+ + +VLCL +T D L D+EEYE+ILED++EEC KYG + +V IP
Sbjct: 366 GLSTV-----VTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIP 420
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
RP + G E PG GKVF+E+ + C A+ AL+GRKF V Y+ DKY +++
Sbjct: 421 RPIE-GVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 476
>gi|387193280|gb|AFJ68695.1| splicing factor U2AF 65 kDa subunit [Nannochloropsis gaditana
CCMP526]
Length = 424
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 203/364 (55%), Gaps = 42/364 (11%)
Query: 25 TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAF 84
TQQ+TRHARRVYVGG A++ + FF+Q++ P VV + +N +K FAF
Sbjct: 82 TQQSTRHARRVYVGGNFGDASDFEVLAFFNQIINE-SLERPSPAGPVVAIQVNRQKHFAF 140
Query: 85 VEMRTVEEASNA-MALDGIIFEGVAVRVRRPTDYNPTL------------AAALGPGQPS 131
+E+ +V ++ M LDG+ F G ++V+RPTDY+P L A Q S
Sbjct: 141 LELNSVPLTTSVIMQLDGVPFRGNPLKVKRPTDYHPELLPLDTPPPPTLKVANFRALQAS 200
Query: 132 PNLNLAAVGL-ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
L +A+ GL A GA + P ++FVGGLPY+ T+ Q++ELL +FG L GFDL KD T
Sbjct: 201 GALPMASTGLTAPGANSVPDSPYKIFVGGLPYHVTDDQVRELLSAFGPLRGFDLKKDPAT 260
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
G SKGYGFC Y D AV D+A L+G+ +G KTLTV+ A AS + + + +
Sbjct: 261 GMSKGYGFCEYIDHAVGDVAIQGLHGMDLGGKTLTVKYALASQQLQQQQSMQQMLLST-- 318
Query: 251 IAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECG 310
KVL L +T D L DD+EY+EI+ED+REE
Sbjct: 319 ------------------------TPATKVLVLANMVTPDELKDDQEYQEIVEDVREEVA 354
Query: 311 KYGTLVNVVIPR-PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
K+G ++++VIPR + + +P VGK+F+EY ++ A +L GR+F G V A +Y
Sbjct: 355 KFGEVLSLVIPRPEEPSAPPSPAVGKIFVEYAESSQTKAAAQSLQGRRFAGRIVQASFYD 414
Query: 370 EDKY 373
E+K+
Sbjct: 415 EEKF 418
>gi|410054709|ref|XP_003954504.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa subunit
[Pan troglodytes]
Length = 394
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 196/332 (59%), Gaps = 24/332 (7%)
Query: 47 QAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG 106
+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+E + AMA DGIIF+G
Sbjct: 86 EAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQG 144
Query: 107 VAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTE 166
++++RRP DY P PG S N ++ G+ S + + ++F+GGLP Y +
Sbjct: 145 QSLKIRRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDSAHKLFIGGLPNYLND 195
Query: 167 TQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV 226
Q+KELL SFG L F+LVKD TG SKGY FC Y D VTD A A LNG+++GDK L V
Sbjct: 196 DQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLV 255
Query: 227 RRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEA 286
+RA+ + + ++ Q + +Q L +S + +GG + +VLCL
Sbjct: 256 QRASVGA-----KNATLSTINQTPVTLQVPGLMSSQVQ-MGGHPT-------EVLCLMNM 302
Query: 287 ITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGC 346
+ + L DDEEYEEI+ED+R+EC KYG + ++ IPRP +G E PG GK+F+E+ C
Sbjct: 303 VLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDC 361
Query: 347 ATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
A L+GRKF V Y D Y +D+
Sbjct: 362 QKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 393
>gi|449547880|gb|EMD38847.1| hypothetical protein CERSUDRAFT_81656 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 206/382 (53%), Gaps = 48/382 (12%)
Query: 14 GAFPLMPVQVM------TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P MPVQ +R +RR+Y+G + P NEQ +A FF+ M + + P
Sbjct: 95 GLPPPMPVQSFGMGIGGNPNLSRQSRRLYIGSITPDINEQNLAEFFNGKMKEMDIGTGAP 154
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G+ V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY GP
Sbjct: 155 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLNGPLKIRRPKDYG-------GP 207
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
+P +++ G+ S + + ++VFVGGLP Y E Q+ ELL+SFG L F+LV++
Sbjct: 208 DVLAPMMHVP--GVVSTNV--PDSANKVFVGGLPMYLNEEQVMELLKSFGELKAFNLVRE 263
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
G SKG+ F Y DP+VTD+A +L+G+++GDK L V+RA+ +K Q I
Sbjct: 264 NGNGPSKGFAFFEYVDPSVTDVAIQSLSGMELGDKYLVVQRASVG---AKPGQSPIDEMY 320
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
I + + + +++ T +++L + + + L DD+EY +I ED+ E
Sbjct: 321 GSPAPIPRPIMPATDIDS----------TQSRILLMLNMVVPEELQDDQEYADIYEDITE 370
Query: 308 ECGKYGTLVNVVIPRP--------DQNG----------GETPGVGKVFLEYYDAVGCATA 349
ECG+YG + ++ IPRP +NG E GVG+V+++Y A A
Sbjct: 371 ECGRYGAVEDLRIPRPVKRDKAKWGENGMDSARAAQLADEAAGVGRVYVKYAQPNSAANA 430
Query: 350 KNALSGRKFGGNTVNAFYYPED 371
AL+GR F G ++ A +D
Sbjct: 431 LKALAGRSFAGRSIIATLLSDD 452
>gi|13938661|gb|AAH07487.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Mus
musculus]
Length = 306
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 193/327 (59%), Gaps = 24/327 (7%)
Query: 52 FFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRV 111
FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+E + AMA DGIIF+G ++++
Sbjct: 3 FFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKI 61
Query: 112 RRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKE 171
RRP DY P PG S N ++ G+ S + + ++F+GGLP Y + Q+KE
Sbjct: 62 RRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDSAHKLFIGGLPNYLNDDQVKE 112
Query: 172 LLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
LL SFG L F+LVKD TG SKGY FC Y D VTD A A LNG+++GDK L V+RA+
Sbjct: 113 LLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 172
Query: 232 SSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADA 291
+ + ++ Q + +Q L +S + +GG + +VLCL + +
Sbjct: 173 GA-----KNATLSTINQTPVTLQVPGLMSSQVQ-MGGHPT-------EVLCLMNMVLPEE 219
Query: 292 LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKN 351
L DDEEYEEI+ED+R+EC KYG + ++ IPRP +G E PG GK+F+E+ C A
Sbjct: 220 LLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQ 278
Query: 352 ALSGRKFGGNTVNAFYYPEDKYFNKDY 378
L+GRKF V Y D Y +D+
Sbjct: 279 GLTGRKFANRVVVTKYCDPDSYHRRDF 305
>gi|76779874|gb|AAI06135.1| U2af2 protein [Mus musculus]
Length = 307
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 193/327 (59%), Gaps = 24/327 (7%)
Query: 52 FFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRV 111
FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+E + AMA DGIIF+G ++++
Sbjct: 4 FFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKI 62
Query: 112 RRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKE 171
RRP DY P PG S N ++ G+ S + + ++F+GGLP Y + Q+KE
Sbjct: 63 RRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDSAHKLFIGGLPNYLNDDQVKE 113
Query: 172 LLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
LL SFG L F+LVKD TG SKGY FC Y D VTD A A LNG+++GDK L V+RA+
Sbjct: 114 LLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 173
Query: 232 SSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADA 291
+ + ++ Q + +Q L +S + +GG + +VLCL + +
Sbjct: 174 GA-----KNATLSTINQTPVTLQVPGLMSSQVQ-MGGHPT-------EVLCLMNMVLPEE 220
Query: 292 LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKN 351
L DDEEYEEI+ED+R+EC KYG + ++ IPRP +G E PG GK+F+E+ C A
Sbjct: 221 LLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQ 279
Query: 352 ALSGRKFGGNTVNAFYYPEDKYFNKDY 378
L+GRKF V Y D Y +D+
Sbjct: 280 GLTGRKFANRVVVTKYCDPDSYHRRDF 306
>gi|336368252|gb|EGN96595.1| hypothetical protein SERLA73DRAFT_93106 [Serpula lacrymans var.
lacrymans S7.3]
Length = 396
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 198/368 (53%), Gaps = 32/368 (8%)
Query: 14 GAFPLMPVQVM------TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P MPVQ +R +RR+Y+G + P NEQ +A FF+ M + + P
Sbjct: 27 GLPPPMPVQTFGMGIGSNPNLSRQSRRLYIGSITPDVNEQNLADFFNSKMIEMSIGTGAP 86
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G+ V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY G
Sbjct: 87 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYG-------GV 139
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
+P++++ G+ S + + ++VFVGGLP Y E Q+ ELL+SFG L F+LV++
Sbjct: 140 DMSAPSVHVP--GVVSTNV--PDSINKVFVGGLPTYLNEEQVMELLKSFGELKAFNLVRE 195
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
G SKG+ F Y D +VTD+A +LNG+++GD+ L V+RA S G I
Sbjct: 196 NGNGPSKGFAFFEYVDISVTDVAIQSLNGMELGDRYLVVQRA--SVGAKPGTPGMIPNLP 253
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
+ +G N+ A++L + +T D L DD+EY ++ ED++E
Sbjct: 254 YDQFPEIPRPIMPAGENSSAD---------ARILLMLNMVTPDDLTDDQEYGDLYEDVKE 304
Query: 308 ECGKYGTLVNVVIPRPDQ----NGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
EC YG + ++ IPRP E GVG+V+++Y DA A AL+GR F G ++
Sbjct: 305 ECSVYGAVEDLRIPRPSAMDAIRQDEAAGVGRVYVKYIDADSANNALKALAGRSFAGRSI 364
Query: 364 NAFYYPED 371
A ED
Sbjct: 365 IATLLSED 372
>gi|194756144|ref|XP_001960339.1| GF13310 [Drosophila ananassae]
gi|190621637|gb|EDV37161.1| GF13310 [Drosophila ananassae]
Length = 434
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 204/364 (56%), Gaps = 38/364 (10%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNS-AGPGDAVVNVYINHEKKFAFVEM 87
TR ARR+YVG +P E+ + FF+Q + A+G +S G AV+ N EK FAF+E
Sbjct: 94 TRQARRLYVGNIPFGVTEEEMMGFFNQQLIALGSSSLKTDGKAVLTCQTNLEKNFAFLEF 153
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP--------SPNLNLAAV 139
R+++EA+ A+ DGI+F G +++RRP DY+P A++ +P SP + ++
Sbjct: 154 RSMDEATQAINFDGIVFRGQTLKIRRPHDYHP--VASISCSEPGFATTTMTSPQIVVSTT 211
Query: 140 G---LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
G + S + + P ++++GGLP ETQIKELL SFG L GF+LVKD +T SKG+
Sbjct: 212 GPNHVISTLV--PDSPQKIYIGGLPTCLNETQIKELLLSFGQLKGFNLVKDANTSLSKGF 269
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
F Y DP VT+ A A LNG+++GD+ L V+R+ A S +
Sbjct: 270 AFFEYVDPLVTEQAIAGLNGMQLGDRKLVVQRSIAGGRNSG--------------GVPAT 315
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
LQ G+ + E+ +VLCL + + L DDEEYE+I D+++EC KYG +
Sbjct: 316 VLQVPGLTAIPN-----TESPTEVLCLLNMVLPEELLDDEEYEDIRTDIQQECAKYGDVR 370
Query: 317 NVVIPRPDQNGGETP--GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
++ IPRP G++P G GKVF+++ C A ALSGRKF G V + DKY
Sbjct: 371 SLKIPRPIPK-GDSPKRGCGKVFVQFESVDDCQKAMRALSGRKFSGRIVMTSFSDPDKYL 429
Query: 375 NKDY 378
D+
Sbjct: 430 ADDF 433
>gi|390479436|ref|XP_002762565.2| PREDICTED: splicing factor U2AF 65 kDa subunit [Callithrix jacchus]
Length = 453
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 194/318 (61%), Gaps = 24/318 (7%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 121 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 179
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 180 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 232
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 233 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 290
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 291 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 345
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 346 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 397
Query: 320 IPRPDQNGGETPGVGKVF 337
IPRP +G E PG GK +
Sbjct: 398 IPRP-VDGVEVPGCGKAW 414
>gi|195429288|ref|XP_002062695.1| GK19586 [Drosophila willistoni]
gi|194158780|gb|EDW73681.1| GK19586 [Drosophila willistoni]
Length = 466
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 193/368 (52%), Gaps = 49/368 (13%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
TR ARR+YVG +P ++ + FF+ + ++G G V+ N EK FAF+E R
Sbjct: 130 TRQARRLYVGNIPFGVTDKEMMNFFNVQLQSLGLKQFHDGTPVLTCQTNLEKNFAFLEFR 189
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
++ E + A+A DG+ F G +++RRP DY+P + + +L VGL+ +
Sbjct: 190 SMGETTQAIAFDGVNFRGQTLKIRRPHDYHPVTSLS----------SLETVGLSDTIVTS 239
Query: 149 A---------------EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
A + P ++++G LP E QIKELL SFG L GF+LVKD +TG S
Sbjct: 240 AHTPVPMKDLVSTLVPDSPQKIYIGSLPPCLDEAQIKELLLSFGRLRGFNLVKDANTGMS 299
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGY F Y D AVT+ A A LNG+ +GD+ L V+R+ A + + + Q
Sbjct: 300 KGYAFFEYVDSAVTEQAIAGLNGMLLGDRRLVVQRSIAGGRNASNHSPASVLQ------- 352
Query: 254 QKMALQTSGMNTLGGGMSLFGETLA-KVLCLTEAITADALADDEEYEEILEDMREECGKY 312
+ G S+F A ++LCL + + L DDEEYE+I D+++EC K+
Sbjct: 353 ------------VPGFPSVFSTGAATEILCLLNMVQPEDLLDDEEYEDICVDIKQECDKH 400
Query: 313 GTLVNVVIPRPDQNGGETP--GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
G + + IPRP G+TP G GKVF+ + C A NALSGRKF G V ++
Sbjct: 401 GKVKGLKIPRPLV--GKTPRAGCGKVFVRFESMEDCQKALNALSGRKFNGRIVVTSFFNL 458
Query: 371 DKYFNKDY 378
DKY ++
Sbjct: 459 DKYEKNEF 466
>gi|198456623|ref|XP_001360392.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
gi|198135682|gb|EAL24967.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 195/384 (50%), Gaps = 48/384 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP----GDAVVNVYINHEKKFAF 84
TR ARR+YVG +P E I FF+Q +G N G G AV++ N +K FAF
Sbjct: 122 TRQARRLYVGNIPFGVTEDDIMAFFNQQFLLLGDNCGGQLCLDGKAVLSCQANLDKNFAF 181
Query: 85 VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT-----------LAAALGPGQPSPN 133
+E R+++EA+ A DGI F G +++RRP DY+P + A+G S
Sbjct: 182 IEFRSMQEATQATTFDGISFRGQVLKIRRPHDYHPVGSVGAAAGAGSIPDAVGGCASSAA 241
Query: 134 LNLAAVGLASGAIGGA-------EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVK 186
+ +G++G + P ++++GGLP ETQIKELL SFG L GF+LVK
Sbjct: 242 AKSRSSSAETGSLGSQAISNLVPDSPHKIYIGGLPTCLNETQIKELLLSFGQLRGFNLVK 301
Query: 187 DRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
D T SKGY F Y DP +T+ A LNG+++GD+ L V+R+ S +
Sbjct: 302 DPSTTLSKGYAFFEYVDPLLTEQVIANLNGMQLGDRRLIVQRSIPSGRYA---------- 351
Query: 247 AQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMR 306
Q I IQ L + + G++ +VLCL + + L D+EEYE+I D+
Sbjct: 352 GNQQIPIQVPGLVATSLTGSTAGLN----NATQVLCLLNMVLPEELLDNEEYEDIRADIE 407
Query: 307 EECGKYGTLVNVVIPRPD------------QNGGETPGVGKVFLEYYDAVGCATAKNALS 354
+EC KYG ++++ IPRP + G GKV++ + A ALS
Sbjct: 408 QECSKYGEVLSLKIPRPQVSGGEGEGEGGGDSATRPKGCGKVYVHFGSIEDSEKALGALS 467
Query: 355 GRKFGGNTVNAFYYPEDKYFNKDY 378
GRKF G V ++ DKY ++D+
Sbjct: 468 GRKFSGRIVIGSFFDRDKYLSEDF 491
>gi|403413555|emb|CCM00255.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 202/382 (52%), Gaps = 49/382 (12%)
Query: 14 GAFPLMPVQVM------TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P MPVQ +R +RR+Y+G + P NEQ +A FF+ M + + GP
Sbjct: 202 GLPPPMPVQSFGMGIGGNPNLSRQSRRLYIGSITPDINEQNLADFFNSKMKEMSIGTGGP 261
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G+ V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY
Sbjct: 262 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYG--------- 312
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
G S ++ G+ S + + +++FVGGLP Y E Q+ ELL+SFG L F+LV++
Sbjct: 313 GMDSIAPSMHVPGVVSTNV--PDSINKIFVGGLPTYLNEEQVMELLKSFGDLKAFNLVRE 370
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
G SKG+ F Y DP VTD+A +L+G+++GDK L V+RA+ +K Q I
Sbjct: 371 NGNGPSKGFAFFEYVDPGVTDVAIQSLSGMELGDKFLVVQRASVG---AKPGQPPIPGLY 427
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
Q + I + L + T A++L + + + L DD+EY ++ ED++E
Sbjct: 428 DQ-VEIPRPILPAGDVEG----------TDARILLMLNMVVPEDLTDDQEYADVYEDVKE 476
Query: 308 ECGKYGTLVNVVIPRP------------------DQNGGETPGVGKVFLEYYDAVGCATA 349
EC KYG + ++ IPRP Q E GVG+V++++ ++ A A
Sbjct: 477 ECSKYGLVEDLRIPRPVKRDKAKWGEGGHESAITAQRIDEAAGVGRVYVKFTESYSAAQA 536
Query: 350 KNALSGRKFGGNTVNAFYYPED 371
AL+GR F G ++ A ED
Sbjct: 537 LKALAGRSFAGRSIIATLLSED 558
>gi|194884971|ref|XP_001976363.1| GG20057 [Drosophila erecta]
gi|190659550|gb|EDV56763.1| GG20057 [Drosophila erecta]
Length = 440
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 198/363 (54%), Gaps = 39/363 (10%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIG--GNSAGPGDAVVNVYINHEKKFAFVE 86
TR ARR+YVG +P E+ + FF+Q + A+G G G AV+ N EK FAF+E
Sbjct: 101 TRQARRLYVGNIPFGVTEEEMMKFFNQQLLALGLAGAQYMDGKAVLTCQTNLEKNFAFLE 160
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALG----------PGQPSPNLNL 136
R+++EA+ A+ DGI+F G +++RRP DY P + + P + L
Sbjct: 161 FRSMDEATQALNFDGILFRGQVLKIRRPHDYQPVPSIRVSAMESYRSFRLPDNTVTHPPL 220
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
A + L+S + P+++FVGGLP + QI++LL+SFG L +LVKD +T SKG+
Sbjct: 221 ATIPLSSIV---PDSPNKIFVGGLPTCLGQDQIRDLLQSFGELKRLNLVKDTNTCLSKGF 277
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
F Y DP VTD A A L+G+++G++ L V+R+ + + Q+ +
Sbjct: 278 AFFEYFDPTVTDHAIAGLHGMQLGNRRLVVQRSIPGGKHAVSGQQPL------------- 324
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
+Q G++TL L + +++CL + + L D+EE+E+I D+ +EC KYG +
Sbjct: 325 -VQVPGISTL-----LDPGSPTEIICLLNMVLPEELLDNEEFEDIRTDIEQECAKYGEVR 378
Query: 317 NVVIPRPDQNGGETP--GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
++ IPRP G+ P G GKVF+++ A ALSGRKF G V +Y +KY
Sbjct: 379 SIKIPRPI---GQAPKRGCGKVFVQFESVEDSQRALKALSGRKFSGRIVMTSFYDPEKYL 435
Query: 375 NKD 377
D
Sbjct: 436 LDD 438
>gi|195149862|ref|XP_002015874.1| GL11290 [Drosophila persimilis]
gi|194109721|gb|EDW31764.1| GL11290 [Drosophila persimilis]
Length = 487
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 198/389 (50%), Gaps = 58/389 (14%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP----GDAVVNVYINHEKKFAF 84
TR ARR+YVG +P E I FF+Q +G + G G AV++ N +K FAF
Sbjct: 118 TRQARRLYVGNIPFGVTEDDIMAFFNQQFLLLGDDCGGQLCLDGKAVLSCQANLDKNFAF 177
Query: 85 VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT-----------LAAALGPGQPSPN 133
+E R+++EA+ A DGI F G +++RRP DY+P + A+G S
Sbjct: 178 IEFRSMQEATQATTFDGISFRGQVLKIRRPHDYHPVGSVGAAAGAGSIPDAVGGCASSAA 237
Query: 134 LNLAAVGLASGAIGGA-------EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVK 186
+ +G++G + P ++++GGLP ETQIKELL SFG L GF+LVK
Sbjct: 238 AKSRSSSADTGSLGSQAISNLVPDSPHKIYIGGLPTCLNETQIKELLLSFGQLRGFNLVK 297
Query: 187 DRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
D T SKGY F Y DP +T+ A LNG+++GD+ L V+R+ S
Sbjct: 298 DPSTTLSKGYAFFEYVDPLLTEQVIANLNGMQLGDRRLIVQRSIPSG------------- 344
Query: 247 AQQHIAIQKMALQTSGMNTLGGGMSLFGET-----LAKVLCLTEAITADALADDEEYEEI 301
++ IQ++ +Q G+ SL G T +VLCL + + L D+EEYE+I
Sbjct: 345 --RYAGIQQIPIQVPGLV----ATSLTGSTAGLNNATQVLCLLNMVLPEELLDNEEYEDI 398
Query: 302 LEDMREECGKYGTLVNVVIPRPD------------QNGGETPGVGKVFLEYYDAVGCATA 349
D+ +EC KYG ++++ IPRP + G GKV++ + A
Sbjct: 399 RADIEQECSKYGEVLSLKIPRPQASGGEGEGGGGGDSATRPKGCGKVYVHFGTIEDSEKA 458
Query: 350 KNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
ALSGRKF G V ++ DKY ++D+
Sbjct: 459 LGALSGRKFSGRIVIGSFFDRDKYLSEDF 487
>gi|324503285|gb|ADY41429.1| Splicing factor U2AF 65 kDa subunit [Ascaris suum]
Length = 522
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/358 (38%), Positives = 201/358 (56%), Gaps = 33/358 (9%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P +E A+ FF+Q M + G + PG+ V+ +N +K
Sbjct: 198 VPVVGPSVTCQSRRLYVGNIPFGCSEDAMLDFFNQQMH-LCGLAQAPGNPVLACQMNLDK 256
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+++E + MA DGI F G +++RRP DY P ++ + G N+
Sbjct: 257 NFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQP-MSTSYDMG------NMMVSN 309
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ A+ P ++F+GGLP Y Q+KELL SFG L F+LV D TG SKGY F
Sbjct: 310 IV------ADSPYKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTDVSTGVSKGYAFAE 363
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y DP++TD A A LNG+++GDK L V+ + A++ + S A Q +Q
Sbjct: 364 YLDPSLTDQAIAGLNGMQLGDKNLVVQLSCANARAAM----STTAFPQ---------IQV 410
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI 320
+G++ G +VLCL +T + L +DEEYE+ILED+REEC KYG + ++ +
Sbjct: 411 AGIDLSHG-----AGPPTEVLCLMNMVTEEELKEDEEYEDILEDIREECAKYGFVKSIEV 465
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
PR G + GVGKVF+E+ C A+ AL+GRKF TV YY D Y + +
Sbjct: 466 PR-SIPGVDVTGVGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDLYHRRQF 522
>gi|409040470|gb|EKM49957.1| hypothetical protein PHACADRAFT_264412 [Phanerochaete carnosa
HHB-10118-sp]
Length = 575
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 202/377 (53%), Gaps = 53/377 (14%)
Query: 14 GAFPLMPVQV------MTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P MPVQ + +R +RR+Y+G + P NEQ +A FF++ M + + P
Sbjct: 197 GLPPPMPVQSFGMGMGVNPNLSRQSRRLYIGSITPEINEQNLADFFNEKMKEMSIGTGAP 256
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G+ V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY G
Sbjct: 257 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLSGPLKIRRPKDYG-------GS 309
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
+P++++ G+ S + + ++VFVGGLP Y E Q+ ELL SFG L F+LV++
Sbjct: 310 ENLAPSMHVP--GVVSTNV--PDSINKVFVGGLPPYLNEEQVMELLTSFGDLKAFNLVRE 365
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT--ASSGQSKTEQESILA 245
G SKG+ F Y DPAVTD+A +LN +++GDK L V+RA+ A +GQ I
Sbjct: 366 NGNGPSKGFAFFEYVDPAVTDVAIQSLNEMELGDKYLVVQRASVGAKNGQ-------IPP 418
Query: 246 QAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDM 305
QA I K L + + A++L + + + L DD+EY +I ED+
Sbjct: 419 QALYPTEIPKPILPAGDLEGVE----------ARILLMLNMVVPEDLNDDQEYADIYEDV 468
Query: 306 REECGKYGTLVNVVIPRP-----------------DQNGGETPGVGKVFLEYYDAVGCAT 348
++EC K+G + ++ IPRP Q E GVG+V++ + A G
Sbjct: 469 KDECEKHGPIEDLRIPRPVKKDKAKWGESGLDPLSAQRVDEAAGVGRVYVRFVGADGAKR 528
Query: 349 AKNALSGRKFGGNTVNA 365
A AL+GR F G ++ A
Sbjct: 529 ALKALAGRSFAGRSIIA 545
>gi|297302956|ref|XP_001119590.2| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial
[Macaca mulatta]
Length = 432
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/317 (43%), Positives = 193/317 (60%), Gaps = 24/317 (7%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLM 360
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 361 SSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIE 412
Query: 320 IPRPDQNGGETPGVGKV 336
IPR +G E PG GKV
Sbjct: 413 IPR-LVDGVEVPGCGKV 428
>gi|219116422|ref|XP_002179006.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409773|gb|EEC49704.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 325
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 192/349 (55%), Gaps = 33/349 (9%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q TRHARR+YVG LPP E AI F + + I + D V++ YINHE++F FVE
Sbjct: 2 QQTRHARRLYVGNLPPHITEDAIHVEFRRAI-EIASPTPLSEDPVLSTYINHERRFCFVE 60
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+TVE A+ M LDG+ +GV V+V+RP DYN +A + P P L+++ +G+ SG +
Sbjct: 61 FKTVEMATACMNLDGLHVQGVPVKVKRPNDYNANMAPKIHPSA-LPPLDVSKLGIVSGTV 119
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLV-KDRDTGNSKGYGFCVYQDPA 205
+GP+++F+GGL Y+ ++Q+ ELL++FG + F LV D ++ SKGY F Y DP
Sbjct: 120 --EDGPNKIFIGGLHYHLQDSQVMELLQAFGKIKAFHLVSNDPESNMSKGYCFVEYADPN 177
Query: 206 VTDIACAALNGLKMGD-KTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMN 264
+T IA LNG+ +G+ K LT R A +G + A Q +G+
Sbjct: 178 ITPIAVQGLNGMDIGNGKALTARLAGDRTGGAGGAAFLAHAMDPQ-----------NGVP 226
Query: 265 TLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPD 324
+ +VL L +T + LA D EY+ + +++++EC K+G L + IPR
Sbjct: 227 NIP----------TRVLVLHNMVTDEDLATDTEYQGLFDEVKDECAKFGRLERLEIPR-- 274
Query: 325 QNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ P KVFL Y A++ L GR+FG N V ++PE ++
Sbjct: 275 ----QGPAARKVFLGYVTVAEAMQAQHELQGRQFGPNVVQTTFFPESEF 319
>gi|195057468|ref|XP_001995263.1| GH23055 [Drosophila grimshawi]
gi|193899469|gb|EDV98335.1| GH23055 [Drosophila grimshawi]
Length = 453
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 198/363 (54%), Gaps = 47/363 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
TR ARR+YVG +P + + FF+ + + G G AV+ N EK FAF+E+R
Sbjct: 124 TRQARRLYVGNIPFNTTDDEMRAFFNVQIQRMCGALENDGKAVLTCQTNLEKNFAFLELR 183
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNP--TLAAALGPGQPSPNLNLAAVGLASGAI 146
+++E + A++ DGI + G ++++RRP DY+ T + +G A G SGA+
Sbjct: 184 SMDETTLAISFDGINYRGQSLKIRRPHDYHAGGTTGSFVG-----------ATGYVSGAV 232
Query: 147 GGA---------EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
+ + P ++++GGLP + Q+KELL +FG L GF++VKD + G+ KGY
Sbjct: 233 VQSNAAIATVVPDTPHKIYIGGLPTCLNDDQVKELLMTFGHLRGFNMVKD-ELGHGKGYA 291
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA 257
FC Y D ++T+ A A LNG+++G++ L V+R+ A T Q +L Q A K+
Sbjct: 292 FCEYMDASITEQAIAGLNGMQLGERKLIVQRSLAGVRNLVTHQLPVL-QVPGFPADVKVG 350
Query: 258 LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVN 317
T +VLCL + D L DD EYE+I +D++EEC K+G +++
Sbjct: 351 KAT------------------EVLCLLNMVMPDELLDDAEYEDIRKDIKEECAKFGKVIS 392
Query: 318 VVIPRPDQNGGET--PGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
+ IPRP GE+ PG GKV++ + C A ALSGR+F G V +Y +K+
Sbjct: 393 IKIPRP---FGESPQPGCGKVYVRFETTDVCKKALKALSGRRFSGRIVMTSFYDPNKFKR 449
Query: 376 KDY 378
KD+
Sbjct: 450 KDF 452
>gi|392565476|gb|EIW58653.1| hypothetical protein TRAVEDRAFT_37512 [Trametes versicolor
FP-101664 SS1]
Length = 548
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 202/383 (52%), Gaps = 48/383 (12%)
Query: 14 GAFPLMPVQV------MTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P MPV + +R +RR+Y+G + P NEQ + FF+ M + + P
Sbjct: 165 GLPPPMPVNTFGMGTGVNPNLSRQSRRLYIGSITPDINEQNLTDFFNSKMKEMNLGTGAP 224
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G+ V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY
Sbjct: 225 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFLNGPLKIRRPKDY---------- 274
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
G P N+ G+ S + + +++FVGGLP Y E Q+ ELL SFG L F+LV++
Sbjct: 275 GGPDMLANMHVPGVVSTNV--PDSANKIFVGGLPTYLNEEQVMELLSSFGELKAFNLVRE 332
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT--ASSGQSKTEQESILA 245
G SKG+ F Y DP+VTD+A +L+G+++GDK L V+RA+ A GQS +
Sbjct: 333 NGNGPSKGFAFFEYVDPSVTDVAIPSLSGMELGDKYLVVQRASVGAKPGQSPIPGMGMFD 392
Query: 246 QAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDM 305
A + I M + + + ++L + + + L+DD+EY ++ ED+
Sbjct: 393 MAPE-IPKPIMPVGERDLEAMQD----------RILLMLNMVVPEELSDDQEYGDLYEDV 441
Query: 306 REECGKYGTLVNVVIPRP-----------------DQNGGETPGVGKVFLEYYDAVGCAT 348
+EEC KYGT+ ++ IPRP Q E GVG+V+++++D A
Sbjct: 442 KEECEKYGTVEDLRIPRPVKKDKAKWGEGRESAIAAQRADEAAGVGRVYVKFHDPRAAAN 501
Query: 349 AKNALSGRKFGGNTVNAFYYPED 371
A AL+GR F G ++ A +D
Sbjct: 502 ALKALAGRSFAGRSIIATLLTDD 524
>gi|392589921|gb|EIW79251.1| hypothetical protein CONPUDRAFT_83522 [Coniophora puteana
RWD-64-598 SS2]
Length = 411
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 201/385 (52%), Gaps = 52/385 (13%)
Query: 14 GAFPLMPVQVM------TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P +PVQ +R +RR+Y+G + P NEQ +A FF+ M + + GP
Sbjct: 27 GLPPPIPVQTFGMGIGSNPNLSRQSRRLYIGSITPDVNEQNLADFFNGKMIEMSIGTGGP 86
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G+ V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY G
Sbjct: 87 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYG-------GD 139
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPD---RVFVGGLPYYFTETQIKELLESFGTLHGFDL 184
+PN ++ G+ S + PD ++FVGGLP Y E Q+ ELL+SFG L F+L
Sbjct: 140 AIMAPNFHVP--GVVSTNV-----PDSIHKIFVGGLPPYLNEEQVMELLKSFGELKAFNL 192
Query: 185 VKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESIL 244
V++ G SKG+ F Y D +VTD+A +LNG+++GD+ L V+RA+ + L
Sbjct: 193 VRENGNGPSKGFAFFEYVDSSVTDVAIQSLNGMELGDRYLVVQRASVGAKPGTPGMIPNL 252
Query: 245 AQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILED 304
Q I + + +T A++L + +T D L DD+EY +I ED
Sbjct: 253 PY-DQFPEIPRPIMPAGDGST----------EDARILLMLNMVTVDDLQDDDEYGDIYED 301
Query: 305 MREECGKYGTLVNVVIPRPDQN------------------GGETPGVGKVFLEYYDAVGC 346
++EEC K+G + ++ IPRP + E GVG+V++++ D G
Sbjct: 302 VKEECSKHGAVEDLRIPRPIKKDKSKWGDAGQQSQTDAARADEAAGVGRVYVKFVDGDGA 361
Query: 347 ATAKNALSGRKFGGNTVNAFYYPED 371
A +L+GR F G ++ A ED
Sbjct: 362 QRAMKSLAGRSFAGRSIIATVLSED 386
>gi|393236224|gb|EJD43774.1| hypothetical protein AURDEDRAFT_137718 [Auricularia delicata
TFB-10046 SS5]
Length = 389
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 191/355 (53%), Gaps = 44/355 (12%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIG-GNSAGPGDAVVNVYINHEKKFAFVEMR 88
R +RR+Y+G + P E+ + FF+Q M + G GD V+ V +N+EK +AFVE R
Sbjct: 26 RQSRRLYIGSITPEITEENLTKFFNQKMREMNLGQQNASGDPVLAVQVNYEKNYAFVEFR 85
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+ ++A+ AMA DGIIF+ +R+RRP DY +G +P+ + G+ S +
Sbjct: 86 SADDATAAMAFDGIIFQSGPLRIRRPKDY-------MGNEYSAPSA-MHVPGVVSTNV-- 135
Query: 149 AEGPD---RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
PD ++FVGGLP Y E Q+ ELL+SFG L F+LV++ + G SKGY F Y D
Sbjct: 136 ---PDSLHKIFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENNNGPSKGYAFFEYVDEE 192
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ-HIAIQKMALQTSGMN 264
VT++A LNG+++GD+ L V+RA+ S + Q + M L +
Sbjct: 193 VTEVAIQGLNGMELGDRVLAVQRASVGSKNGMVVPNPDIPYDQMPEVPRPIMPLNEAPTQ 252
Query: 265 TLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPD 324
A++L + + + L DDEE+ E+ ED++EEC K+G + ++ IPRP
Sbjct: 253 D------------ARILLMLNMVVPEDLVDDEEFAELYEDVKEECAKFGAVEDLRIPRPA 300
Query: 325 QNGG--------------ETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNA 365
+ G E GVG+V+++YY + +TA +L+GR F G ++ A
Sbjct: 301 KRAGPKYGPAAVEAQRVDEAAGVGRVYVKYYKSSDASTALRSLAGRSFAGRSIIA 355
>gi|358059688|dbj|GAA94557.1| hypothetical protein E5Q_01209 [Mixia osmundae IAM 14324]
Length = 564
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 200/377 (53%), Gaps = 41/377 (10%)
Query: 15 AFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN------SAGPG 68
A P+ VQ + A R RR+YVG + P A+EQ + FF+ M G +
Sbjct: 212 AAPMGGVQPIISFA-RQQRRLYVGNIMPTADEQNVTEFFNAKMRENGLSLDDKKVDVQTA 270
Query: 69 DAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG 128
D VV+V +NHEK +AFVE R+ EEAS+AM+ DGI+F+ +++RRP DY G
Sbjct: 271 DPVVSVQVNHEKSYAFVEFRSPEEASSAMSFDGIVFQDQQLKIRRPKDYT---------G 321
Query: 129 QPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDR 188
S +L V ++S + P++VFVGGLP Y + Q+ ELL SFG L F+LVK+
Sbjct: 322 DESGGTHLPGV-ISSNV---PDTPNKVFVGGLPSYLDDEQVLELLSSFGELRSFNLVKEG 377
Query: 189 DTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
SKG+ FC Y DP VTD ACA LNG+++GD+ L V+RA + K +
Sbjct: 378 PQNASKGFAFCEYADPNVTDAACAGLNGMEIGDRYLVVQRAQVGANVYKHPGGYGGSNPA 437
Query: 249 QHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLT--EAITADALADDEEYEEILEDMR 306
A+ ++A G + ET CL +T + L DD++Y +I ED++
Sbjct: 438 LPPALARVAPTIFGQD----------ETAPATRCLQMLNMVTPEELVDDQDYADINEDIK 487
Query: 307 EECGKYGTLVNVVIPRP--------DQNGGET-PGVGKVFLEYYDAVGCATAKNALSGRK 357
+EC KYG +++V IPRP D E+ +GK+F+ + A +A++GR+
Sbjct: 488 DECSKYGEVIDVKIPRPIKTENGRMDVKASESVEHLGKIFVMFDSTESSKKAIDAIAGRQ 547
Query: 358 FGGNTVNAFYYPEDKYF 374
FGG V Y E+ +
Sbjct: 548 FGGRLVICAYEKEETFL 564
>gi|336381013|gb|EGO22165.1| hypothetical protein SERLADRAFT_371639 [Serpula lacrymans var.
lacrymans S7.9]
Length = 381
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 197/379 (51%), Gaps = 48/379 (12%)
Query: 19 MPVQVM------TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVV 72
MPVQ +R +RR+Y+G + P NEQ +A FF+ M + + PG+ V+
Sbjct: 1 MPVQTFGMGIGSNPNLSRQSRRLYIGSITPDVNEQNLADFFNSKMIEMSIGTGAPGNPVL 60
Query: 73 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP 132
V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY G +P
Sbjct: 61 AVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYG-------GVDMSAP 113
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
++++ G+ S + + ++VFVGGLP Y E Q+ ELL+SFG L F+LV++ G
Sbjct: 114 SVHVP--GVVSTNV--PDSINKVFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENGNGP 169
Query: 193 SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIA 252
SKG+ F Y D +VTD+A +LNG+++GD+ L V+RA S G I
Sbjct: 170 SKGFAFFEYVDISVTDVAIQSLNGMELGDRYLVVQRA--SVGAKPGTPGMIPNLPYDQFP 227
Query: 253 IQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
+ +G N+ A++L + +T D L DD+EY ++ ED++EEC Y
Sbjct: 228 EIPRPIMPAGENSSAD---------ARILLMLNMVTPDDLTDDQEYGDLYEDVKEECSVY 278
Query: 313 GTLVNVVIPRPDQNG--------------------GETPGVGKVFLEYYDAVGCATAKNA 352
G + ++ IPRP + E GVG+V+++Y DA A A
Sbjct: 279 GAVEDLRIPRPVKKDKSKWAPGEVGHQSAMDAIRQDEAAGVGRVYVKYIDADSANNALKA 338
Query: 353 LSGRKFGGNTVNAFYYPED 371
L+GR F G ++ A ED
Sbjct: 339 LAGRSFAGRSIIATLLSED 357
>gi|390596686|gb|EIN06087.1| hypothetical protein PUNSTDRAFT_145447 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 602
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 191/364 (52%), Gaps = 58/364 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R +RR+Y+G + P EQ +A FF+ M + + GPG+ V+ V N+EK +AFVE R
Sbjct: 240 SRQSRRLYIGSITPEITEQNLADFFNSKMIEMSIGTGGPGNPVLAVQCNYEKNYAFVEFR 299
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+ E+A+ AMA DGIIF +++RRP DY G P P GL +
Sbjct: 300 SAEDATAAMAFDGIIFLNGPLKIRRPKDY----------GGPDP----MGAGLHVPGVVS 345
Query: 149 AEGPD---RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
PD +VFVGGLP Y E Q+ ELL SFG L F+LV++ G SKG+ F Y D +
Sbjct: 346 TNVPDSINKVFVGGLPAYLNEEQVMELLTSFGELKAFNLVRENGNGPSKGFAFFEYVDES 405
Query: 206 VTDIACAALNGLKMGDKTLTVRRAT--ASSGQSKTEQESILAQAQQHIAIQKMALQTSGM 263
VTD+A ALNG+++GD+ L V+RA+ A G E Q + + + +
Sbjct: 406 VTDVAIQALNGMELGDRYLVVQRASVGAKPGMPNLPYE-------QFPELPRPIMPAGDV 458
Query: 264 NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP 323
+ A++L + + + L DD+EY +I ED++EEC K+G + ++ IPRP
Sbjct: 459 SNRD----------ARILLMLSMVVPEDLVDDQEYADICEDVKEECEKFGAVEDLRIPRP 508
Query: 324 DQN---------GGETP-------------GVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
+ GG+ P GVG+V++++ +A A AL+GR FGG
Sbjct: 509 AKRDRTKWGEGAGGQAPMSAQDYQRMDEAAGVGRVYVKFREARAAGDALKALAGRSFGGR 568
Query: 362 TVNA 365
++ A
Sbjct: 569 SIIA 572
>gi|402223467|gb|EJU03531.1| hypothetical protein DACRYDRAFT_77158 [Dacryopinax sp. DJM-731 SS1]
Length = 392
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 193/363 (53%), Gaps = 45/363 (12%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
+ ARR+Y+G + P E+ + F + + +G G V ++HEK +A++E
Sbjct: 54 KQARRLYIGDITPDTTEENLTAFLKKTLPELGIKVEGEDVGFEEVRVSHEKNYAYIEFSN 113
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV--GLASGAIG 147
++A+ M LDG +F G +++RRP DY L+A +LA V G+ G +
Sbjct: 114 PDDATKTMELDGTVFLGQPLKIRRPHDY---LSAT----------DLAVVFGGIVPGVVS 160
Query: 148 G--AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ +++FVGGLP Y E Q+ ELL++FG L F+LVKD TG SKG+ F Y DP
Sbjct: 161 TNVPDSINKIFVGGLPTYLNEAQVMELLQTFGELRAFNLVKDGSTGVSKGFAFFEYMDPG 220
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
VTD+AC LNG+++GD+ L V+RA+ + +K ++ + L N
Sbjct: 221 VTDVACQGLNGMELGDRYLVVQRASIGANPTKPNMPNMPGTLPPP---RPAILPVDNTN- 276
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQ 325
+ +L L +TA+ L D++YE+ILED+REE G++G ++++ IPRP +
Sbjct: 277 ----------PPSPILLLLNMVTAEELLQDQDYEDILEDVREEMGRFGPVIDIKIPRPQR 326
Query: 326 N-----GGETP---------GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPED 371
G T GVG+V++++ D + A NA++GR+F G ++ A Y ED
Sbjct: 327 RENRWIPGSTSEPVKTDIELGVGRVYVKFADTDSASQALNAVAGRQFSGRSIIATYLQED 386
Query: 372 KYF 374
+
Sbjct: 387 PFL 389
>gi|449680331|ref|XP_002158219.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like, partial [Hydra
magnipapillata]
Length = 259
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 162/293 (55%), Gaps = 36/293 (12%)
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIG 147
R+VEE + AMA DGI+ +G A+++RRP DY P + P G+ S +
Sbjct: 2 RSVEETTLAMAFDGIMLQGQALKIRRPKDYQPIPGISEMQATHIP-------GVVSTVV- 53
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
++ ++VFVGGLP Y E Q+KELL +FG L F+LVKD TG SKGY FC Y D +T
Sbjct: 54 -SDTINKVFVGGLPNYLNEDQVKELLSTFGDLRSFNLVKDSATGLSKGYAFCEYVDIGIT 112
Query: 208 DIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLG 267
D+A A +NG+++GDK L V+RA+ S ++ T Q +I
Sbjct: 113 DVAIAGMNGMQLGDKKLVVQRASVGS-KTMTAQLNI------------------------ 147
Query: 268 GGMSLFGE-TLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN 326
G L E T +LCL + AD L DDE+Y+EI ED+REEC KYG + ++ IPRP+
Sbjct: 148 PGFDLSKEITATNILCLMNMVVADELIDDEDYDEIFEDIREECSKYGRIRSMQIPRPNHE 207
Query: 327 GGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
GVGKVF+EY + A AL+GRKF V YY D Y D+S
Sbjct: 208 -FLVSGVGKVFIEYATSEESKIASEALAGRKFANRVVVTAYYDPDAYHQHDFS 259
>gi|299745153|ref|XP_001831503.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|298406457|gb|EAU90350.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 550
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 190/354 (53%), Gaps = 43/354 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R +RR+Y+G + P NEQ +A FF++ M + + G+ V+ V N+EK +AFVE R
Sbjct: 192 SRQSRRLYIGSITPDVNEQNLAEFFNKKMAEMNIGTGSTGNPVLAVQCNYEKNYAFVEFR 251
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
+ ++A+ AMA DGIIF +++RRP DY + SP +++ G S +
Sbjct: 252 SADDATAAMAFDGIIFINGPLKIRRPKDYGGEVVTG------SPGIHVP--GAVSTNV-- 301
Query: 149 AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD 208
+ ++VFVGGLP Y E Q+ ELL+SFG L F+LV++ G SKG+ F Y D +VTD
Sbjct: 302 PDSINKVFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENGNGPSKGFAFFEYVDSSVTD 361
Query: 209 IACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGG 268
+A +LNG+++GD+ L V+RA+ + + + +G
Sbjct: 362 VAIQSLNGMELGDRYLVVQRASVGA------KPGAPGLPYDQFPDIPRPIMPAGAEV--- 412
Query: 269 GMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP----- 323
T A++L + +T D L DDEEY ++ ED++EEC KYG + ++ IPRP
Sbjct: 413 -------TDARILLMLNMVTPDDLIDDEEYGDLYEDVKEECSKYGEVEDLRIPRPVKKDK 465
Query: 324 ------------DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNA 365
Q E GVG+V+++Y D G A N+L+GR F G ++ A
Sbjct: 466 AKWGEGQISAQDAQRIDEAAGVGRVYVKYADTEGANKALNSLAGRSFAGRSIIA 519
>gi|332375140|gb|AEE62711.1| unknown [Dendroctonus ponderosae]
Length = 374
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 174/306 (56%), Gaps = 37/306 (12%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E + +F+Q M + G + G+ V+ I
Sbjct: 102 PQAAVPVVGSTITRQARRLYVGNIPFGVTEDEMMEYFNQQM-HLSGLAQAAGNPVLACQI 160
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY QP P ++
Sbjct: 161 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QPMPGMSE 209
Query: 137 AAVGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK 194
++ + +G I + P ++F+GGLP Y E Q+KELL SFG L F+LVKD G SK
Sbjct: 210 NSISVPAGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDTAFGLSK 269
Query: 195 GYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQ 254
GY F Y D ++TD A A LNG+++GDK L V+RA+ + + ++L Q +
Sbjct: 270 GYAFAEYIDISMTDQAIAGLNGMQLGDKRLIVQRASVGAKNA-----TVLPAVQIQVP-- 322
Query: 255 KMALQTSGMNTLGGGMSLFGET--LAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
G+SL G + +VLCL +T D L D+EEYE+ILED++EEC KY
Sbjct: 323 --------------GLSLVGASGPPTEVLCLLNMVTPDELKDEEEYEDILEDIKEECNKY 368
Query: 313 GTLVNV 318
G + ++
Sbjct: 369 GVVRSI 374
>gi|224003073|ref|XP_002291208.1| U2 snRNP auxillary splicing factor, U2AF subunit [Thalassiosira
pseudonana CCMP1335]
gi|220972984|gb|EED91315.1| U2 snRNP auxillary splicing factor, U2AF subunit, partial
[Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 195/362 (53%), Gaps = 33/362 (9%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAI--GGNSAG---------PGDAVVNVYIN 77
TRHARR+YVG +P +++EQ F + ++I NS D +++VYIN
Sbjct: 1 TRHARRLYVGNIPDVSDEQLHHFFRDAIRSSIILDNNSEAHSSHKHQYVDNDPIISVYIN 60
Query: 78 HEKKFAFVEMRTVEEASNAMALDGIIFEGV-AVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
E++FAF+E +T+E + MALDG+ G V+++RP DYNP +A L P L+
Sbjct: 61 RERRFAFLEFKTMEITTACMALDGLDVMGRGKVKIKRPNDYNPAVAPMLN-ASTMPVLDT 119
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVK-DRDTGNSKG 195
+G+ S + +GP+++FVGGLPY+ ++Q+ ELL +FG + F+LVK D + SKG
Sbjct: 120 GKLGIISMTV--HDGPNKIFVGGLPYHLVDSQVLELLSAFGAVKAFNLVKNDPMSDTSKG 177
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y F Y DP VT IA LNG+ MG G+ +Q ++
Sbjct: 178 YCFVEYCDPNVTQIAAMGLNGMDMG------------GGKQPYQQPIVVKDPMAVANAAA 225
Query: 256 MALQ----TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
AL + G+ L ++ G T+ ++L L + + LA E+ + + E++REE GK
Sbjct: 226 SALDQAFGSGGVPPLAPPTAMPGSTVTRILVLLNMVMDEDLATAEDRKFLEEEVREEVGK 285
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPED 371
YGTL+++ IP P + G V K+FLEY A+ L GR FG N V+A Y+ E+
Sbjct: 286 YGTLLSMKIPMPHE-GCAPSAVKKIFLEYATPAEAMYAEKELKGRAFGPNVVDASYFSEE 344
Query: 372 KY 373
Y
Sbjct: 345 DY 346
>gi|302411252|ref|XP_003003459.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261357364|gb|EEY19792.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
Length = 568
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 46/381 (12%)
Query: 7 PFGATQLGAFPLMPVQV----MTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG 62
P T+L AF P V + +R A+R+ V LP A E+++A+FF+ + G
Sbjct: 215 PMDPTKLQAFMNQPGTVNSASLKPSNSRQAKRLLVSKLPSSATEESVASFFNLQLN--GL 272
Query: 63 NSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE---------GVAVRVRR 113
N D V+ ++++K F VE R EA+ A+ALDGI E G + +RR
Sbjct: 273 NVIESTDPCVSCQLSNDKSFCVVEFRNASEATVALALDGISMEADSGTDGAAGRGMEIRR 332
Query: 114 PTDY-NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKEL 172
P DY P + L P +P G+ S + + P+++ + G P Y TE Q+ EL
Sbjct: 333 PKDYIVPAVTEEL-PYEP---------GVVSSNV--VDTPNKLSITGFPPYLTEEQVTEL 380
Query: 173 LESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAS 232
L SFG L F LV+DR T S+G+ FC Y D A D+A L+G+ +G+ L +++A+
Sbjct: 381 LTSFGELKAFVLVRDRHTDESRGFVFCEYVDSAANDVAIQGLSGMDLGNSKLKIQKASIG 440
Query: 233 SGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADAL 292
Q + + + + M+ L G + E ++VL L +TAD L
Sbjct: 441 VTQ-----------------VAGVEMGVAAMSMLAGTTATDSEE-SRVLQLLNMVTADEL 482
Query: 293 ADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNA 352
D+E+YEEI+ED++EEC KYGT++ V +PRP ++ GVGK+F++Y A +
Sbjct: 483 MDNEDYEEIVEDVQEECAKYGTVLEVKVPRPVGGSRQSAGVGKIFVKYETKEATKKALQS 542
Query: 353 LSGRKFGGNTVNAFYYPEDKY 373
L+GRKF TV Y+PE+ +
Sbjct: 543 LAGRKFADRTVVTTYFPEENF 563
>gi|330803435|ref|XP_003289712.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
gi|325080222|gb|EGC33787.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
Length = 501
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 182/349 (52%), Gaps = 38/349 (10%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
+ +RR+YVG +PP + + FF+ + A N PG VV IN K FAF+E RT
Sbjct: 158 KQSRRIYVGNIPPGITDSELIEFFNAAVLAANLN-VKPGPPVVFCQINAPKCFAFIEFRT 216
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDY----NPTLAAALGPGQPSPNLNLAAVGLASGA 145
EEA+NAM DGI + +++RRP DY +PT +AL P+
Sbjct: 217 PEEATNAMRFDGITLKNYTLKIRRPKDYQQSNDPTNTSALPTIVPT-------------- 262
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ ++FVGGLP E Q+K LL ++G L F+LVKD +TG SKGY FC Y DP
Sbjct: 263 -NVPDSEHKIFVGGLPSNLNEEQVKTLLSAYGKLKAFNLVKDTNTGISKGYAFCEYLDPD 321
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
VTD ACA+LNG+ + DK L V+RA SI+AQ I + T+
Sbjct: 322 VTDQACASLNGISLADKNLIVQRA------------SIVAQTLSTIRSTVPSSPTTSTTQ 369
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQ 325
+ ++V+ L + + L DD+EY+ IL D++EEC +G ++ +P P +
Sbjct: 370 TSIDNNT---KPSRVIQLLNLVDKEDLYDDKEYDNILIDVKEECENFGPTQSLWLPMPSK 426
Query: 326 NGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
N + V ++++E+ A L G+K+ G T+ + YYPED Y+
Sbjct: 427 NPLD---VTRIYIEFQQLESSQKACLGLGGKKYNGRTIFSAYYPEDLYY 472
>gi|326428095|gb|EGD73665.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 2
[Salpingoeca sp. ATCC 50818]
Length = 415
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 189/388 (48%), Gaps = 62/388 (15%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNS--AGPGDAVVNVYINHEKKFAFVEMRTV 90
R++ V LP + + +F + I N PG V+ ++ + K A +E R+V
Sbjct: 36 RQLVVENLPEGTRDHDLMSFMND---CIASNKLITQPGQPVIKCTLSEDGKSAVLEFRSV 92
Query: 91 EEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA- 149
+EA+N + D F+G +RVRRP +Y +P ++ + + SGA A
Sbjct: 93 DEATNGLVFDRERFKGAQLRVRRPDNYE------------APKGHITRIPMQSGANVSAV 140
Query: 150 --EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
+ P ++++GG+P Y +E Q+KELLE FG L F LV D TG SKG+ FC Y DPA+T
Sbjct: 141 VQDSPYKIYIGGIPPYLSEEQVKELLEPFGQLKSFHLVMDTSTGQSKGFAFCEYMDPAIT 200
Query: 208 DIACAALNGLKMGDKTLTVRRATASS---GQSKTEQESI--------------------- 243
D ALN L++G+K L V+RA+ + Q SI
Sbjct: 201 DTMIGALNDLRIGEKRLLVQRASIGARGGAQQNNPMHSIPAFKSAGMQGPGGPMMPLPPM 260
Query: 244 ---LAQAQQHIAI------QKMALQTSGMNTLGGGMSLFGETL-------AKVLCLTEAI 287
L A I Q + G G+ L T+ ++L L +
Sbjct: 261 SAPLKPAAPGAPITPGPISQPPPMSLPLPPPSGAGLPLPAPTMPTQQLVATRILILMNMV 320
Query: 288 TADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGE--TPGVGKVFLEYYDAVG 345
T D L DDEEYE+I D+REEC K+G ++++ IPRP + E PGVGK++L+Y A
Sbjct: 321 TVDELRDDEEYEDICADIREECEKFGEILDMKIPRPSKENPEEQVPGVGKIYLKYASADE 380
Query: 346 CATAKNALSGRKFGGNTVNAFYYPEDKY 373
A ALSGR F TV ++PEDK+
Sbjct: 381 ARIAARALSGRSFAERTVVTSFWPEDKF 408
>gi|346978171|gb|EGY21623.1| splicing factor U2AF 50 kDa subunit [Verticillium dahliae VdLs.17]
Length = 589
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 197/383 (51%), Gaps = 46/383 (12%)
Query: 2 AQNMLPFGATQLGAFPLMPVQV----MTQQATRHARRVYVGGLPPLANEQAIATFFSQVM 57
A P T+L AF P V + +R A+R+ V LP A E ++A+FF+ +
Sbjct: 206 APRQQPMDPTKLQAFMNQPGTVNSASLKPSNSRQAKRLLVSKLPSSATEDSVASFFNLQL 265
Query: 58 TAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE---------GVA 108
G N D V+ ++++K F VE R EA+ A+ALDGI E G
Sbjct: 266 N--GLNVIESTDPCVSCQLSNDKSFCVVEFRNASEATVALALDGISMEADSATDGAAGRG 323
Query: 109 VRVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTET 167
+ +RRP DY P + L P +P G+ S + + P+++ + G P Y TE
Sbjct: 324 LEIRRPKDYIVPAVTEEL-PYEP---------GVVSSNV--VDTPNKLSITGFPPYLTEE 371
Query: 168 QIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 227
Q+ ELL SFG L F LV+DR T S+G+ FC Y D A D+A L+G+ +G+ L ++
Sbjct: 372 QVTELLTSFGELKAFVLVRDRHTDESRGFVFCEYVDSAANDVAIQGLSGMDLGNSKLKIQ 431
Query: 228 RATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAI 287
+A+ Q + + + + M+ L G + E ++VL L +
Sbjct: 432 KASIGVTQ-----------------VAGVEMGVAAMSMLAGTTATDSEE-SRVLQLLNMV 473
Query: 288 TADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCA 347
TAD L D+E+YEEI+ED++EEC KYGT++ V +PRP ++ GVGK+F++Y
Sbjct: 474 TADELMDNEDYEEIVEDVQEECAKYGTVLEVKVPRPVGGSRQSAGVGKIFVKYETKEATK 533
Query: 348 TAKNALSGRKFGGNTVNAFYYPE 370
A +L+GRKF TV Y+PE
Sbjct: 534 KALQSLAGRKFADRTVVTTYFPE 556
>gi|296420976|ref|XP_002840043.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636253|emb|CAZ84234.1| unnamed protein product [Tuber melanosporum]
Length = 540
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 196/377 (51%), Gaps = 34/377 (9%)
Query: 2 AQNMLPFGATQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQV 56
A P T+L AF P V T +R A+R+ + +PP +E+++ FF+Q
Sbjct: 188 APRQAPMDPTRLHAFMTQPSNVATASTLKPTNSRQAKRLLMSNIPPGTDEESLLQFFNQT 247
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTD 116
++++ + GP D + +V ++ K +E + +A+ +AL GI F G + ++RP D
Sbjct: 248 LSSLNVTTGGP-DPITSVQLSGSKILGLLEFKNTNDATVCLALSGIEFNGGNIEIKRPRD 306
Query: 117 YNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESF 176
Y + P P + + G+ S + + P+++ + +P Y + Q+ ELL+SF
Sbjct: 307 Y-------IVPIVPEDHRHQEP-GVISSDV--PDTPNKILISEIPEYLQDEQVIELLKSF 356
Query: 177 GTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQS 236
G L F LVKD SKG FC Y DP T+IA LN +++ D TL VRRA+ Q+
Sbjct: 357 GDLKAFVLVKDVTDETSKGIAFCEYLDPGTTEIAVEGLNAMEIADNTLRVRRASIGMKQA 416
Query: 237 KTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDE 296
A + + MA+ + G S+ E ++VL L +TAD L D E
Sbjct: 417 ----------AGVEMGVNAMAM-------MAGTTSVDLEA-SRVLQLLNMVTADELLDPE 458
Query: 297 EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGR 356
EY+EI ED+R+EC K+G+LV++ +PRP + GVGK+F+ + + A +L+GR
Sbjct: 459 EYDEICEDIRDECQKFGSLVDMKVPRPSGGSRQAAGVGKIFVRFETQESASNALRSLAGR 518
Query: 357 KFGGNTVNAFYYPEDKY 373
KF TV Y+ E+ Y
Sbjct: 519 KFADRTVVCTYFSEENY 535
>gi|440792998|gb|ELR14199.1| U2 snRNP auxilliary factor, large subunit, splicing factor
subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 462
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 181/352 (51%), Gaps = 65/352 (18%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R ARR+YVG +PP G S VV+ +N +K F+F+E T
Sbjct: 172 RQARRLYVGSIPP-------------------GVSDPDHRPVVSSQLNPDKSFSFIEFST 212
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
++EA+ MALDGI G+ ++VRRP DY +P A A G + G+ S +
Sbjct: 213 IDEATAGMALDGITMNGMTLKVRRPKDYVSPPTAQAPASG------GIHIPGIVSTNV-- 264
Query: 149 AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD 208
+ P+++F+GGLP Y E Q+KELL +FG L F+LVKD TGNSKGY F Y D +VTD
Sbjct: 265 PDSPNKIFIGGLPSYLNEAQVKELLTAFGPLKAFNLVKDTATGNSKGYAFFEYLDASVTD 324
Query: 209 IACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGM-NTLG 267
AC LNG+K+GDKTL V+RA + Q T + M + SGM N
Sbjct: 325 RACQGLNGMKLGDKTLLVQRANIGAKQDGTG------------GLIMMPMDPSGMLNASP 372
Query: 268 GGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNG 327
S L L + + L DE++ +I+ED+R+EC KYG +++
Sbjct: 373 SAAS------LLNLQLLNLVRPEELVSDEDHADIVEDVRQECEKYGNVMS---------- 416
Query: 328 GETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
VF+E+ D A A++ L+GRKF G+ V Y+ ED Y +D+S
Sbjct: 417 --------VFVEFADREDAARAQSNLAGRKFNGHVVLTSYFDEDDYEQRDFS 460
>gi|336465212|gb|EGO53452.1| hypothetical protein NEUTE1DRAFT_92746 [Neurospora tetrasperma FGSC
2508]
Length = 584
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 203/379 (53%), Gaps = 48/379 (12%)
Query: 11 TQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
T+L AF P + A +R ++R+ V +PP A ++++ FF+ + G N
Sbjct: 233 TKLQAFMTQPGGAVNSTALKPTNSRQSKRLIVSNIPPSATDESLLGFFNLQLN--GLNVI 290
Query: 66 GPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG---------VAVRVRRPTD 116
D V I+ + FA +E R +A+ A+ALDGI E +++RRP D
Sbjct: 291 DSADPCVQCQISPDHSFAMLEFRNSPDATVALALDGITMEAEDANGAAGAGGLKIRRPKD 350
Query: 117 YNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESF 176
Y + A+ PN + + +S I + P+++ V +P Y +E QI ELL +F
Sbjct: 351 Y---IVPAI---VEDPNYDPDSEVPSSIVI---DSPNKISVTNIPAYLSEEQIMELLVAF 401
Query: 177 GTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQS 236
G L F LVKD+ T S+G FC Y D +VT +A LN + +GD+ L V++A+
Sbjct: 402 GKLKSFVLVKDKHTEESRGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKAS------ 455
Query: 237 KTEQESILAQAQQHIAIQKMA--LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD 294
IQ++A L + M+ L G SL G+ +++V+ L +TAD L D
Sbjct: 456 --------------YGIQQVAGELSVNAMSMLAGTTSLDGD-VSRVVQLLNMVTADELMD 500
Query: 295 DEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALS 354
+++YEEI +D++EEC K+GT+V++ IPRP ++ GVGK+F++Y ++ A AL+
Sbjct: 501 NDDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQSAGVGKIFIKYENSDQATKALKALA 560
Query: 355 GRKFGGNTVNAFYYPEDKY 373
GRKF TV A Y+PE+ +
Sbjct: 561 GRKFADRTVVATYFPEENF 579
>gi|85111663|ref|XP_964044.1| hypothetical protein NCU03039 [Neurospora crassa OR74A]
gi|28925805|gb|EAA34808.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 584
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 203/379 (53%), Gaps = 48/379 (12%)
Query: 11 TQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
T+L AF P + A +R ++R+ V +PP A ++++ FF+ + G N
Sbjct: 233 TKLQAFMTQPGGAVNSAALKPTNSRQSKRLIVSNIPPSATDESLLGFFNLQLN--GLNVI 290
Query: 66 GPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG---------VAVRVRRPTD 116
D V I+ + FA +E R +A+ A+ALDGI E +++RRP D
Sbjct: 291 DSADPCVQCQISPDHSFAMLEFRNSPDATVALALDGITMEAEDANGAAGAGGLKIRRPKD 350
Query: 117 YNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESF 176
Y + A+ PN + + +S I + P+++ V +P Y +E QI ELL +F
Sbjct: 351 Y---IVPAI---VEDPNYDPDSEVPSSIVI---DSPNKISVTNIPAYLSEEQIMELLVAF 401
Query: 177 GTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQS 236
G L F LVKD+ T S+G FC Y D +VT +A LN + +GD+ L V++A+
Sbjct: 402 GKLKSFVLVKDKHTEESRGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKAS------ 455
Query: 237 KTEQESILAQAQQHIAIQKMA--LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD 294
IQ++A L + M+ L G SL G+ +++V+ L +TAD L D
Sbjct: 456 --------------YGIQQVAGELSVNAMSMLAGTTSLDGD-VSRVVQLLNMVTADELMD 500
Query: 295 DEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALS 354
+++YEEI +D++EEC K+GT+V++ IPRP ++ GVGK+F++Y ++ A AL+
Sbjct: 501 NDDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQSAGVGKIFIKYENSDQATKALKALA 560
Query: 355 GRKFGGNTVNAFYYPEDKY 373
GRKF TV A Y+PE+ +
Sbjct: 561 GRKFADRTVVATYFPEENF 579
>gi|380481793|emb|CCF41637.1| U2 snRNP auxilliary factor [Colletotrichum higginsianum]
Length = 550
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 184/355 (51%), Gaps = 41/355 (11%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R+ + LPP A E++I +FF+ + G N D + ++ + FA VE R
Sbjct: 222 SRQAKRLLINNLPPSATEESIQSFFNLQLN--GLNIIESADPCTSCQVSKDNSFAVVEFR 279
Query: 89 TVEEASNAMALDGIIFEG----------VAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
EA+ A+ALDGI E + + RP DY P +P
Sbjct: 280 NASEATIALALDGISMEADDATNGEAANQGLSIHRPKDYIVPAVVDDVPYEP-------- 331
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
G+ S + + P ++ + LP Y ++ Q+ ELL SFG L F LV+DR T S+G F
Sbjct: 332 -GVVSNVV--IDTPSKLSIANLPTYLSDEQVSELLVSFGELKAFVLVRDRSTEESRGIAF 388
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y DPA TD+A LNG+ +GDK L V++A+ Q +A + +A M
Sbjct: 389 CEYVDPAATDVAIQGLNGMDLGDKKLRVQKASVGVTQ--------VAGVEMGVAAMSMLA 440
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
T+ ++ GET +VL L +T + L D+++YEEI ED++EEC K+G ++++
Sbjct: 441 GTTSTDS--------GET--RVLQLLNMVTPEELMDNDDYEEIKEDVQEECSKFGNVLDI 490
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
IPRP ++ GVGK+F+ + + A AL+GRKF TV Y+PE+ +
Sbjct: 491 KIPRPVGGSRQSAGVGKIFVRFENTESAKKALQALAGRKFADRTVVTTYFPEENF 545
>gi|350295506|gb|EGZ76483.1| hypothetical protein NEUTE2DRAFT_76972 [Neurospora tetrasperma FGSC
2509]
Length = 592
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 203/379 (53%), Gaps = 48/379 (12%)
Query: 11 TQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
T+L AF P + A +R ++R+ V +PP A ++++ FF+ + G N
Sbjct: 241 TKLQAFMTQPGGAVNSAALKPTNSRQSKRLIVSNIPPSATDESLLGFFNLQLN--GLNVI 298
Query: 66 GPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG---------VAVRVRRPTD 116
D V I+ + FA +E + +A+ A+ALDGI E +++RRP D
Sbjct: 299 DSADPCVQCQISPDHSFAMLEFKNSPDATVALALDGITMEAEDANGAAGAGGLKIRRPKD 358
Query: 117 YNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESF 176
Y + A+ PN + + +S I + P+++ V +P Y +E QI ELL +F
Sbjct: 359 Y---IVPAI---VEDPNYDPDSEVPSSIVI---DSPNKISVTNIPAYLSEEQIMELLVAF 409
Query: 177 GTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQS 236
G L F LVKD+ T S+G FC Y D +VT +A LN + +GD+ L V++A+
Sbjct: 410 GKLKSFVLVKDKHTEESRGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKAS------ 463
Query: 237 KTEQESILAQAQQHIAIQKMA--LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD 294
IQ++A L + M+ L G SL G+ +++V+ L +TAD L D
Sbjct: 464 --------------YGIQQVAGELSVNAMSMLAGTTSLDGD-VSRVVQLLNMVTADELMD 508
Query: 295 DEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALS 354
+++YEEI +D++EEC K+GT+V++ IPRP ++ GVGK+F++Y ++ A AL+
Sbjct: 509 NDDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQSAGVGKIFIKYENSDQATKALKALA 568
Query: 355 GRKFGGNTVNAFYYPEDKY 373
GRKF TV A Y+PE+ +
Sbjct: 569 GRKFADRTVVATYFPEENF 587
>gi|353240191|emb|CCA72072.1| related to pre-mRNA splicing factor U2AF large chain
[Piriformospora indica DSM 11827]
Length = 403
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 195/384 (50%), Gaps = 77/384 (20%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMT--AIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
R +RR+Y+G + PLA+E++IA FF+ M + +SA P V+ V +N EK +AFVE
Sbjct: 44 RQSRRLYLGSITPLADEESIALFFNSQMRERKLTTSSAPP---VLAVQVNREKNYAFVEF 100
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGA-I 146
R+ E+A+ MALDG +F +RVRRP DY GP A G+A A +
Sbjct: 101 RSAEDATAGMALDGTVFLDGPLRVRRPHDY-------AGPE--------AMTGVAGFATL 145
Query: 147 GGAEGPD---RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK--------- 194
A PD ++F+G LP + TE QI ELL+SFG L F+LV++ T SK
Sbjct: 146 LPATMPDSVNKIFIGNLPTHLTEDQIVELLKSFGELKAFNLVREHGTNVSKVFTVRITLS 205
Query: 195 -------GYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
G+ F Y DPAVTDIA +LNG+ +GDK L V+RA S+ A+
Sbjct: 206 MNLTGSQGFAFVEYADPAVTDIATESLNGMDLGDKKLVVQRA------------SVGAKG 253
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
I + M + + + L E +V+ + + A+ L DD EYEEIL+D+R
Sbjct: 254 GVPIPPEAMDIPAPIV-----AVDLNKEANGRVVLMLNMVVAEDLMDDVEYEEILDDIRS 308
Query: 308 ECGKYGTLVNVVIPRP-----------DQN---------GGETPGVGKVFLEYYDAVGCA 347
EC +G ++ V +PRP D N E GVG+V++++ D G
Sbjct: 309 ECSGFGQVLGVYVPRPLKKDKSRWDTMDPNTMSPAEIAKADEIAGVGRVYVKFSDTEGAT 368
Query: 348 TAKNALSGRKFGGNTVNAFYYPED 371
TA L+GR F G T+ ED
Sbjct: 369 TAVRQLAGRSFAGRTIITTLMRED 392
>gi|336274240|ref|XP_003351874.1| hypothetical protein SMAC_00421 [Sordaria macrospora k-hell]
gi|380096157|emb|CCC06204.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 594
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 203/379 (53%), Gaps = 48/379 (12%)
Query: 11 TQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
T+L AF P + A +R ++R+ V +PP A ++++ FF+ + + N
Sbjct: 243 TKLQAFMTQPGGTVNSTALKPTNSRQSKRLIVSNIPPSATDESLLGFFNLQLNGL--NVI 300
Query: 66 GPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVA---------VRVRRPTD 116
D V I+ + FA VE R +A+ A+ALDGI E +++RRP D
Sbjct: 301 DSVDPCVQCQISPDHSFAMVEFRNSPDATVALALDGITMEADDANDAASAGGLKIRRPKD 360
Query: 117 YNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESF 176
Y + A+ PN + + ++ I + P+++ V +P Y TE QI ELL +F
Sbjct: 361 Y---IVPAI---VEDPNYDPDSEVPSNIVI---DSPNKISVTNIPAYLTEEQIMELLVAF 411
Query: 177 GTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQS 236
G L F LVKD+ T S+G FC Y D +VT +A LN + +GD+ L V++A+
Sbjct: 412 GKLKSFVLVKDKHTEESRGIAFCEYHDSSVTSVAIDGLNNMMLGDRALKVQKAS------ 465
Query: 237 KTEQESILAQAQQHIAIQKMA--LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD 294
IQ++A L + M+ L G SL G+ +++V+ L +TAD L D
Sbjct: 466 --------------YGIQQVAGELSVNAMSMLAGTTSLDGD-VSRVVQLLNMVTADELMD 510
Query: 295 DEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALS 354
+++YEEI +D++EEC K+GT+V++ IPRP ++ GVGK++++Y ++ A +L+
Sbjct: 511 NDDYEEIRDDVQEECEKFGTIVSLKIPRPTGGSRQSAGVGKIYIKYENSDQATKALKSLA 570
Query: 355 GRKFGGNTVNAFYYPEDKY 373
GRKF TV A Y+PE+ +
Sbjct: 571 GRKFADRTVVATYFPEENF 589
>gi|443924699|gb|ELU43686.1| rRNA primary transcript binding protein [Rhizoctonia solani AG-1
IA]
Length = 678
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 195/383 (50%), Gaps = 71/383 (18%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R +RR+YVG + ANE + FF++ M + + G GD V+ V INHEK +AFVE R+
Sbjct: 233 RQSRRLYVGNITYEANENNLQEFFNRKMVEMKIGTGGGGDPVIGVQINHEKSYAFVEFRS 292
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPT-LAAALG---PGQPSPNLNLAAVGLASGA 145
E+A+ AMA DGI+F+ +++RRP DY + L+A +G PG S N+
Sbjct: 293 AEDATAAMAFDGIMFQSGPLKIRRPKDYTGSDLSAPMGVHVPGVVSTNV----------- 341
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC-VYQDP 204
+ +++FVGGLP Y E Q+ ELL+SFG L F+LV R+ GN C VY DP
Sbjct: 342 ---PDSINKIFVGGLPTYLDENQVMELLKSFGELKAFNLV--RENGNGAFRRDCQVYVDP 396
Query: 205 AVTDIACAALNGLKMGDKTLTVRRAT--ASSGQSKTEQESILAQAQQHI-AIQKMALQTS 261
+VTDIA LNG+++GD+ L V+RA+ A SG E + I I + A
Sbjct: 397 SVTDIAIQGLNGMELGDRFLVVQRASVGAKSGIPGVPPELFAPAIPRPIMPITETADPNP 456
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
+T +L L + + L DD EY EI+ED+REEC K+G + ++ IP
Sbjct: 457 SDST--------------ILLLLNMVAPEDLTDDGEYTEIVEDVREECSKFGPVRSLAIP 502
Query: 322 RP--------DQNGG-------------------------ETPGVGKVFLEYYDAVGCAT 348
RP D N G E GVG+V++++ G ++
Sbjct: 503 RPAKKEKSKWDANAGALVTAGGAVLAPGAVGATAGDGKTDEQRGVGRVYIKFETPEGASS 562
Query: 349 AKNALSGRKFGGNTVNAFYYPED 371
A L+GR F G ++ A +D
Sbjct: 563 ALRGLAGRAFAGRSIIATILADD 585
>gi|154319442|ref|XP_001559038.1| hypothetical protein BC1G_02202 [Botryotinia fuckeliana B05.10]
Length = 596
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 195/385 (50%), Gaps = 49/385 (12%)
Query: 7 PFGATQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
P ++L AF P +T A +R ++R+ V +P E+ I +FF+ + G
Sbjct: 238 PMDPSKLQAFMAQPSGQVTNAALKPSNSRQSKRLLVHNIPADTKEETIVSFFNLQLN--G 295
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG-------------VA 108
N D +++ ++ + FA +E +T +A+ A+ALDGI +G
Sbjct: 296 LNVIEGSDPLISAQVSKDGSFALLEFKTQSDATVALALDGITMDGNDHMETENGSADTRG 355
Query: 109 VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQ 168
+ +RRP DY P +P G+ S + A+ +++ V +P+Y + Q
Sbjct: 356 LSIRRPKDYIVPAVTDETPFEP---------GVISNVV--ADTQNKISVTNIPHYLNDEQ 404
Query: 169 IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
+ ELL SFG L F LVKD +T S+G FC Y DPA TDIA LNG+++GDK L V+R
Sbjct: 405 VTELLVSFGELKAFVLVKDSNTDESRGIAFCEYVDPAATDIAVEGLNGMELGDKHLKVQR 464
Query: 229 ATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAIT 288
A+ + Q + + + + M+ L G S E +VL L +T
Sbjct: 465 ASIGNTQ-----------------VSGLEMSVNAMSMLAGTTSQDLEN-GRVLQLLNMVT 506
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT 348
+ L D+E+YEEI ED++EEC KYG ++ + +PRP ++ GVGK+F+++
Sbjct: 507 PEELIDNEDYEEICEDVKEECEKYGKVLEMKVPRPTGGSRQSTGVGKIFVKFDTPDSAGK 566
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKY 373
A AL+GRKF TV Y+PE+ +
Sbjct: 567 ALKALAGRKFADRTVVTTYFPEENF 591
>gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster]
Length = 449
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 198/368 (53%), Gaps = 46/368 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP----GDAVVNVYINHEKKFAF 84
TR ARR+YVG +P ++ + FF+ + A+G + G+AV+ N EK FAF
Sbjct: 107 TRQARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNLEKNFAF 166
Query: 85 VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-----SPNLNLA-- 137
+E R+++EAS A+ DG++F G +++RRP DY P + ++ + P +N+A
Sbjct: 167 LEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQPVPSISVSAMESYRSFRVPAINVAQQ 226
Query: 138 -AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
AV L I + P++++VGGLP + Q+KELL+SFG L G +LV D +T +KG+
Sbjct: 227 PAVTLPVTTIV-PDSPNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTNTNLNKGF 285
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRA-----TASSGQSKTEQESILAQAQQHI 251
F Y DP+VTD A A L+G+ +GD+ L V+R+ A G T
Sbjct: 286 AFFEYCDPSVTDHAIAGLHGMLLGDRRLVVQRSIPGGKNAFPGHLPT------------- 332
Query: 252 AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
LQ G++TL S + LCL + + L DDEE+E+I D+++EC K
Sbjct: 333 -----VLQVPGISTLQDPGS-----PTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAK 382
Query: 312 YGTLVNVVIPRPDQNGGETP--GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
+G + ++ IPRP G+ P G GKVF+++ A ALSGRKF G V YY
Sbjct: 383 FGEVRSIKIPRPI---GQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSYYD 439
Query: 370 EDKYFNKD 377
+KY D
Sbjct: 440 PEKYLADD 447
>gi|440633242|gb|ELR03161.1| hypothetical protein GMDG_05987 [Geomyces destructans 20631-21]
Length = 559
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 194/381 (50%), Gaps = 41/381 (10%)
Query: 2 AQNMLPFGATQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQV 56
A P ++L AF P +T A +R A+R+ V LP +E+ I FF+
Sbjct: 206 APRQQPMDPSKLQAFMSQPSGSITNAALKPSNSRQAKRLLVHNLPKTLSEEGIVEFFNLQ 265
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE----GVAVRVR 112
+ G N D + ++ +K FA VE +T +A+ A+A+DGI E A+ +R
Sbjct: 266 LN--GLNVVEGSDPCLTAQVSKDKSFALVEFKTTSDATVALAMDGIGIEENGGSRALSIR 323
Query: 113 RPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKEL 172
RP DY + A+ P G+ + + + P+++ + +P Y T+ Q+ EL
Sbjct: 324 RPKDY---IVPAVDEAMHEP-------GVVTNVV--PDTPNKISISNVPPYLTDEQVTEL 371
Query: 173 LESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAS 232
L SFG L F L KD T S+G FC Y D A TDIA LNG+++GDK L V+RA+
Sbjct: 372 LVSFGELKAFVLAKDSTTEESRGIAFCEYVDAAATDIAVEGLNGMELGDKHLKVQRASIG 431
Query: 233 SGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADAL 292
+ Q+ A + + M++ G + G +VL L +TA+ L
Sbjct: 432 TTQT----------AGLEMGVNAMSML--------AGTTTDGLDEGRVLQLLNMVTAEEL 473
Query: 293 ADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNA 352
D+E+YEEILED++EEC KYG ++++ IPRP ++ GVGK+F+++ A
Sbjct: 474 IDNEDYEEILEDVKEECEKYGKVLDIKIPRPSGGSRQSAGVGKIFVKFDTPASAGKALRT 533
Query: 353 LSGRKFGGNTVNAFYYPEDKY 373
L+GRKF TV Y+ E+ +
Sbjct: 534 LAGRKFADRTVVTTYFSEENF 554
>gi|24659166|ref|NP_611769.2| large subunit 2 [Drosophila melanogaster]
gi|7291545|gb|AAF46969.1| large subunit 2 [Drosophila melanogaster]
gi|201066057|gb|ACH92438.1| FI08027p [Drosophila melanogaster]
Length = 449
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 198/363 (54%), Gaps = 36/363 (9%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP----GDAVVNVYINHEKKFAF 84
TR ARR+YVG +P ++ + FF+ + A+G + G+AV+ N EK FAF
Sbjct: 107 TRQARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQTNLEKNFAF 166
Query: 85 VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-----SPNLNLA-- 137
+E R+++EAS A+ DG++F G +++RRP DY P + ++ + P +N+A
Sbjct: 167 LEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQPVPSISVSAMESYRSFRVPAINVAQQ 226
Query: 138 -AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
AV L I + P++++VGGLP + Q+KELL+SFG L G +LV D +T +KG+
Sbjct: 227 PAVTLPVTTIV-PDSPNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTNTNLNKGF 285
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
F Y DP+VTD A A L+G+ +GD+ L V+R+ + H+
Sbjct: 286 AFFEYCDPSVTDHAIAGLHGMLLGDRRLVVQRSIPGGKNA----------FPGHLPT--- 332
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
LQ G++TL S + LCL + + L DDEE+E+I D+++EC K+G +
Sbjct: 333 VLQVPGISTLQDPGS-----PTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVR 387
Query: 317 NVVIPRPDQNGGETP--GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
++ IPRP G+ P G GKVF+++ A ALSGRKF G V YY +KY
Sbjct: 388 SIKIPRPI---GQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSYYDPEKYL 444
Query: 375 NKD 377
D
Sbjct: 445 ADD 447
>gi|347842431|emb|CCD57003.1| hypothetical protein [Botryotinia fuckeliana]
Length = 606
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 195/385 (50%), Gaps = 49/385 (12%)
Query: 7 PFGATQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
P ++L AF P +T A +R ++R+ V +P E+ I +FF+ + G
Sbjct: 248 PMDPSKLQAFMAQPSGQVTNAALKPSNSRQSKRLLVHNIPADTKEETIVSFFNLQLN--G 305
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG-------------VA 108
N D +++ ++ + FA +E +T +A+ A+ALDGI +G
Sbjct: 306 LNVIEGSDPLISAQVSKDGSFALLEFKTQSDATVALALDGITMDGNDHMETGNGSADTRG 365
Query: 109 VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQ 168
+ +RRP DY P +P G+ S + A+ +++ V +P+Y + Q
Sbjct: 366 LSIRRPKDYIVPAVTDETPFEP---------GVISNVV--ADTQNKISVTNIPHYLNDEQ 414
Query: 169 IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
+ ELL SFG L F LVKD +T S+G FC Y DPA TDIA LNG+++GDK L V+R
Sbjct: 415 VTELLVSFGELKAFVLVKDSNTDESRGIAFCEYVDPAATDIAVEGLNGMELGDKHLKVQR 474
Query: 229 ATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAIT 288
A+ + Q + + + + M+ L G S E +VL L +T
Sbjct: 475 ASIGNTQ-----------------VSGLEMSVNAMSMLAGTTSQDLEN-GRVLQLLNMVT 516
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT 348
+ L D+E+YEEI ED++EEC KYG ++ + +PRP ++ GVGK+F+++
Sbjct: 517 PEELIDNEDYEEICEDVKEECEKYGKVLEMKVPRPTGGSRQSTGVGKIFVKFDTPDSAGK 576
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKY 373
A AL+GRKF TV Y+PE+ +
Sbjct: 577 ALKALAGRKFADRTVVTTYFPEENF 601
>gi|134113282|ref|XP_774666.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257310|gb|EAL20019.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 652
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 191/387 (49%), Gaps = 68/387 (17%)
Query: 14 GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN 73
GAFP R R+Y+GG+ EQ I FF+ +M G + G D V
Sbjct: 264 GAFP-------PSNPVRQNNRLYIGGIKEDMQEQQIQDFFNNLMKE-KGMADGKEDPVKQ 315
Query: 74 VYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY---NPTLAAALGPGQP 130
IN+++ FAF+E+ T E+A+ A+ LDG++ +G ++RVRRP DY +P L G P
Sbjct: 316 CQINNDRNFAFIELHTPEQATAALELDGVVLDGASLRVRRPKDYAGIDPLLQTFNGVVAP 375
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
S A+ P+++F+GG+P Y + Q+ ELL+SFG L F+LVK+
Sbjct: 376 S----------------VADSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNLVKE-SA 418
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE----QESILAQ 246
G SKG+ F Y DP VTD+A L+ +GD+ L V+RA + L+Q
Sbjct: 419 GVSKGFAFAEYLDPEVTDMAIQGLHNFSLGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQ 478
Query: 247 AQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMR 306
A H+ +Q A S ++V+ L +T + L +D++Y +I+ED+
Sbjct: 479 AIPHL-MQNNADAPS----------------SRVMLLLNMVTPEELYNDDDYNDIIEDIN 521
Query: 307 EECGKYGTLVNVVIPRP-------------------DQNGGETPGVGKVFLEYYDAVGCA 347
EEC KYG + V IPRP ++ + GVG+V++ Y D
Sbjct: 522 EECSKYGEIEGVRIPRPVPKSKKWESTEAAAATAERNKRTDDEAGVGRVYVMYKDVESTK 581
Query: 348 TAKNALSGRKFGGNTVNAFYYPEDKYF 374
A NA+ GR+F G T+ PE+++
Sbjct: 582 KAMNAIGGRQFAGRTILVANVPEEEFL 608
>gi|58268792|ref|XP_571552.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|57227787|gb|AAW44245.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 651
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 194/384 (50%), Gaps = 62/384 (16%)
Query: 14 GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN 73
GAFP R R+Y+GG+ EQ I FF+ +M G + G D V
Sbjct: 263 GAFP-------PSNPVRQNNRLYIGGIKEDMQEQQIQDFFNNLMKE-KGMADGKEDPVKQ 314
Query: 74 VYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPN 133
IN+++ FAF+E+ T E+A+ A+ LDG++ +G ++RVRRP DY A + P
Sbjct: 315 CQINNDRNFAFIELHTPEQATAALELDGVVLDGASLRVRRPKDY-----AGIDP------ 363
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
L G+ + ++ A+ P+++F+GG+P Y + Q+ ELL+SFG L F+LVK+ G S
Sbjct: 364 LLQTFNGVVAPSV--ADSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNLVKE-SAGVS 420
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE----QESILAQAQQ 249
KG+ F Y DP VTD+A L+ +GD+ L V+RA + L+QA
Sbjct: 421 KGFAFAEYLDPEVTDMAIQGLHNFSLGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQAIP 480
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
H+ +Q A S ++V+ L +T + L +D++Y +I+ED+ EEC
Sbjct: 481 HL-MQNNADAPS----------------SRVMLLLNMVTPEELYNDDDYNDIIEDINEEC 523
Query: 310 GKYGTLVNVVIPRP-------------------DQNGGETPGVGKVFLEYYDAVGCATAK 350
KYG + V IPRP ++ + GVG+V++ Y D A
Sbjct: 524 SKYGEIEGVRIPRPVPKSKKWESTEAAAATAERNKRTDDEAGVGRVYVMYKDVESTKKAM 583
Query: 351 NALSGRKFGGNTVNAFYYPEDKYF 374
NA+ GR+F G T+ PE+++
Sbjct: 584 NAIGGRQFAGRTILVANVPEEEFL 607
>gi|156061663|ref|XP_001596754.1| hypothetical protein SS1G_02977 [Sclerotinia sclerotiorum 1980]
gi|154700378|gb|EDO00117.1| hypothetical protein SS1G_02977 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 518
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 193/390 (49%), Gaps = 52/390 (13%)
Query: 7 PFGATQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
P ++L AF P +T A +R ++R+ V +P E+ + FF+ + G
Sbjct: 163 PMDPSKLQAFMAQPSGSVTNAALKPSNSRQSKRLLVHNIPADTKEETLVGFFNLQLN--G 220
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG-------------VA 108
N D ++ ++ + FA +E +T +A+ A+ALDGI E
Sbjct: 221 LNVIEGSDPCISAQVSKDGSFALLEFKTQSDATVALALDGITMENNDHMVTGNGSADTQG 280
Query: 109 VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQ 168
+ +RRP DY P +P G+ S + + +++ V +P+Y + Q
Sbjct: 281 LSIRRPKDYIVPAVTDETPFEP---------GVVSNIVPDTQ--NKISVANIPHYLNDEQ 329
Query: 169 IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
+ ELL SFG L F LVKD +T S+G FC Y DPA TDIA LNG+++GDK L V+R
Sbjct: 330 VTELLVSFGELKAFVLVKDSNTDESRGIAFCEYVDPAATDIAVEGLNGMELGDKHLKVQR 389
Query: 229 ATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAIT 288
A+ + Q + + + + M+ L G S E +VL L +T
Sbjct: 390 ASIGNTQ-----------------VSGLEMSVNAMSMLAGTTSQDLEN-GRVLQLLNMVT 431
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT 348
+ L D+E+YEEI ED++EEC KYG ++ + +PRP ++ GVGK+F+++
Sbjct: 432 PEELIDNEDYEEICEDVKEECEKYGKVLEMKVPRPTGGSRQSTGVGKIFVKFDTPDSAGK 491
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
A AL+GRKF TV Y+PED + DY
Sbjct: 492 ALKALAGRKFADRTVVTTYFPED---DDDY 518
>gi|388580158|gb|EIM20475.1| hypothetical protein WALSEDRAFT_55089 [Wallemia sebi CBS 633.66]
Length = 391
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 194/381 (50%), Gaps = 58/381 (15%)
Query: 15 AFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNV 74
+F +P + R +RRV++G L P NE+ + F+ M+ I + PG+ VVNV
Sbjct: 15 SFSNLPPTLEDFNGARASRRVFIGDLKPNHNEENLTKLFNDKMSTIDQVAKIPGEPVVNV 74
Query: 75 YINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNL 134
+ H++ +A++E R +EA+ A+ DG IF+G ++++RP + L G
Sbjct: 75 TVKHDRGYAYIEFRNTDEAAYALQFDGTIFQGEGIQIKRPQEVLDELQRKQG-------- 126
Query: 135 NLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK 194
SG + ++ ++FVG LP + + Q+ ELL SFG L F+LVK+ + SK
Sbjct: 127 -----HTVSGTVPDSD--QKIFVGSLPTFLNDEQVMELLGSFGELRSFNLVKEGTSDVSK 179
Query: 195 GYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR-ATASSGQSKTEQESILAQAQQHIAI 253
G+ FC Y DPA+TDIA LNG+++GD+ L V+R +T G+ S +AQ I
Sbjct: 180 GFAFCEYMDPALTDIAIQGLNGMEVGDRKLVVQRSSTGPMGKIGVGGTSSIAQ------I 233
Query: 254 QKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
+A +T T VL L +TA+ L DD +Y+EI ED++EEC +YG
Sbjct: 234 LPLASETQAYRT-------------NVLLLLNMVTAEELKDDLDYQEICEDIQEECSQYG 280
Query: 314 TLVNVVIPRPD----------------------QNGGETPGVGKVFLEYYDAVGCATAKN 351
++ + IPRP + E GVGK+F+ Y + A
Sbjct: 281 EIIKIKIPRPPRPDDPVFSTPGVTLSSGEDLRFEAASEELGVGKIFILYKTEEQASKALK 340
Query: 352 ALSGRKFGGNTV-NAFYYPED 371
AL+GR FGG TV A+ PED
Sbjct: 341 ALAGRVFGGRTVIGAYGKPED 361
>gi|405121398|gb|AFR96167.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 655
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 194/384 (50%), Gaps = 62/384 (16%)
Query: 14 GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN 73
GAFP R R+Y+GG+ EQ I FF+ +M G + G D V
Sbjct: 267 GAFP-------PSNPVRQNNRLYIGGIKEDMQEQQIQDFFNNLMKE-KGMADGKEDPVKQ 318
Query: 74 VYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPN 133
IN+++ FAF+E+ T E+A+ A+ LDG++ +G ++RVRRP DY A + P
Sbjct: 319 CQINNDRNFAFIELHTPEQATAALELDGVVLDGASLRVRRPKDY-----AGIDP------ 367
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
L G+ + ++ A+ P+++F+GG+P Y + Q+ ELL+SFG L F+LVK+ G S
Sbjct: 368 LLQTFNGVVAPSV--ADSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNLVKE-SAGVS 424
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE----QESILAQAQQ 249
KG+ F Y DP VTD+A L+ +GD+ L V+RA + L+QA
Sbjct: 425 KGFAFAEYLDPEVTDMAIQGLHNFALGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQAIP 484
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
H+ +Q A S ++V+ L +T + L +D++Y +I+ED+ +EC
Sbjct: 485 HL-MQNNADAPS----------------SRVMLLLNMVTPEELYNDDDYNDIIEDINDEC 527
Query: 310 GKYGTLVNVVIPRP-------------------DQNGGETPGVGKVFLEYYDAVGCATAK 350
KYG + V IPRP ++ + GVG+V++ Y D A
Sbjct: 528 SKYGEIEGVRIPRPVPKSKKWESTEAAAATAERNKRTDDEAGVGRVYVMYKDVESTKKAM 587
Query: 351 NALSGRKFGGNTVNAFYYPEDKYF 374
NA+ GR+F G T+ PE+++
Sbjct: 588 NAIGGRQFAGRTILVANVPEEEFL 611
>gi|426196755|gb|EKV46683.1| hypothetical protein AGABI2DRAFT_206147 [Agaricus bisporus var.
bisporus H97]
Length = 558
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 197/377 (52%), Gaps = 40/377 (10%)
Query: 14 GAFPLMPVQVM------TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G P MPVQ +R +RR+Y+G + NEQ +A FF+ M + +
Sbjct: 179 GLPPPMPVQSFGMGIGGNPNLSRQSRRLYIGSITQEVNEQNLADFFNAKMAEMNIGTGIT 238
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
G+ V+ V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY + G
Sbjct: 239 GNPVLAVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYGGDTIVSPGV 298
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
P G+ S + + ++VFVGGLP Y E Q+ ELL+SFG L F+LV++
Sbjct: 299 HVP---------GVVSTNV--PDSINKVFVGGLPTYLNEEQVMELLKSFGELKAFNLVRE 347
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
TG SKG+ F Y D AVTD+A +LNG+++GD+ L V+RA+ + L
Sbjct: 348 NGTGTSKGFAFFEYVDQAVTDVAIQSLNGMELGDRYLVVQRASVGAKPGTPGMIPNLP-Y 406
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
Q I + + T + +++L + +T + L +D+EY ++ +D++
Sbjct: 407 DQFPEIPRPIMPAGKDQT---------SSESRILLMLNMVTPEDLHEDDEYGDLYDDVKA 457
Query: 308 ECGKYGTLVNVVIPRP-------------DQNGGETPGVGKVFLEYYDAVGCATAKNALS 354
EC KYG L ++ IPRP Q E GVG+V+++Y ++ + A NAL+
Sbjct: 458 ECSKYGELEDLRIPRPVKKDKTSSMSAQDAQRIDEAAGVGRVYVKYTNSKSASAALNALA 517
Query: 355 GRKFGGNTVNAFYYPED 371
GR F G ++ A +D
Sbjct: 518 GRSFAGRSIIATLLSDD 534
>gi|409081516|gb|EKM81875.1| hypothetical protein AGABI1DRAFT_70425 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 375
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 196/372 (52%), Gaps = 40/372 (10%)
Query: 19 MPVQVM------TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVV 72
MPVQ +R +RR+Y+G + NEQ +A FF+ M + + G+ V+
Sbjct: 1 MPVQSFGMGIGGNPNLSRQSRRLYIGSITQEVNEQNLADFFNAKMAEMNIGTGITGNPVL 60
Query: 73 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP 132
V N+EK +AFVE R+ E+A+ AMA DGIIF +++RRP DY + PG P
Sbjct: 61 AVQCNYEKNYAFVEFRSAEDATAAMAFDGIIFINGPLKIRRPKDYGGD--TIVSPGVHVP 118
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
G+ S + + ++VFVGGLP Y E Q+ ELL+SFG L F+LV++ TG
Sbjct: 119 -------GVVSTNV--PDSINKVFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENGTGT 169
Query: 193 SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIA 252
SKG+ F Y D AVTD+A +LNG+++GD+ L V+RA+ + L Q
Sbjct: 170 SKGFAFFEYVDQAVTDVAIQSLNGMELGDRYLVVQRASVGAKPGTPGMIPNLPY-DQFPE 228
Query: 253 IQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
I + + T + +++L + +T + L +D+EY ++ +D++ EC KY
Sbjct: 229 IPRPIMPAGKDQT---------SSESRILLMLNMVTPEDLHEDDEYGDLYDDVKAECSKY 279
Query: 313 GTLVNVVIPRP-------------DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
G L ++ IPRP Q E GVG+V+++Y ++ + A NAL+GR F
Sbjct: 280 GELEDLRIPRPVKKDKTSSMSAQDAQRIDEAAGVGRVYVKYTNSKSASAALNALAGRSFA 339
Query: 360 GNTVNAFYYPED 371
G ++ A +D
Sbjct: 340 GRSIIATLLSDD 351
>gi|297706019|ref|XP_002829852.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Pongo abelii]
Length = 352
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 177/290 (61%), Gaps = 24/290 (8%)
Query: 46 EQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE 105
++A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+E + AMA DGIIF+
Sbjct: 74 KEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQ 132
Query: 106 GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFT 165
G ++++RRP DY P PG S N ++ G+ S + + ++F+GGLP Y
Sbjct: 133 GQSLKIRRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDSAHKLFIGGLPNYLN 183
Query: 166 ETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLT 225
+ Q+KELL SFG L F+LVKD TG SKGY FC Y D VTD A A LNG+++GDK L
Sbjct: 184 DDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLL 243
Query: 226 VRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTE 285
V+RA+ + + ++ Q + +Q L +S + +GG + +VLCL
Sbjct: 244 VQRASVGA-----KNATLSTINQTPVTLQVPGLMSSQVQ-MGGHPT-------EVLCLMN 290
Query: 286 AITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGK 335
+ + L DDEEYEEI+ED+R+EC KYG + ++ IPRP +G E PG GK
Sbjct: 291 MVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGK 339
>gi|241166827|ref|XP_002409934.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
gi|215494685|gb|EEC04326.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
Length = 444
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 187/362 (51%), Gaps = 41/362 (11%)
Query: 29 TRHARRVYVGGLP--------PLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
TR ARR+YVG +P PL + + +F+ M A G + A PG+ V+ IN +K
Sbjct: 112 TRQARRLYVGNIPFGCSEASRPLLLREEMMDYFNAQMHACGFSQA-PGNPVLACQINLDK 170
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY--NPTLAAALGPGQPSPNLNLAA 138
FAF+E+ ++ + DY P LG G +P
Sbjct: 171 NFAFLEVSALDTDLGTPCCPTFVL----------YDYLSPPFSGNCLGAGNGTPGDTW-- 218
Query: 139 VGLASGAIGGA--EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
+G SG I + P ++F+GGLP Y E Q++ELL SFG L F+LVKD TG SKGY
Sbjct: 219 LGFLSGVISTVVQDSPHKIFIGGLPNYLNEDQVRELLMSFGQLRAFNLVKDSATGLSKGY 278
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
FC Y + TD A LNG+++GDK L V+RA+ +K Q ++ A I + +
Sbjct: 279 AFCEYVEVTTTDQAIMGLNGMQLGDKKLIVQRASVG---AKNSQMNVSRDAPVQIQVPGL 335
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
LQ G G +VLCL + + L D+EEYE+ILED+ EEC KYG +
Sbjct: 336 QLQG------GAGPP------TEVLCLMNLVCPEELKDEEEYEDILEDIHEECNKYGVVK 383
Query: 317 NVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNK 376
++ IPRP + G + PG GK F+E+ + C A+ +L+GRKF V Y+ DKY +
Sbjct: 384 SIEIPRPIE-GVDVPGCGKAFVEFNSVIDCQKAQQSLTGRKFSNRVVVTSYFDPDKYHRR 442
Query: 377 DY 378
++
Sbjct: 443 EF 444
>gi|402906865|ref|XP_003916203.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Papio anubis]
Length = 446
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 186/360 (51%), Gaps = 51/360 (14%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAM-ALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
K FAF+E+ + + AL + F V P
Sbjct: 195 KNFAFLEVSWGNRSGPVLCALAMLTFPEWVVSTVVP------------------------ 230
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
+ ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY F
Sbjct: 231 -----------DSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAF 279
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y D VTD A A LNG+++GDK L V+RA+ + + ++ Q + +Q L
Sbjct: 280 CEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGL 334
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
+S + +GG + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++
Sbjct: 335 MSSQVQ-MGGHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSI 386
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IPRP +G E PG GK+F+E+ C A L+GRKF V Y D Y +D+
Sbjct: 387 EIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 445
>gi|321260434|ref|XP_003194937.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Cryptococcus gattii WM276]
gi|317461409|gb|ADV23150.1| Splicing factor (U2 snRNP auxiliary factor large subunit), putative
[Cryptococcus gattii WM276]
Length = 654
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 190/384 (49%), Gaps = 62/384 (16%)
Query: 14 GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN 73
GAFP R R+Y+GG+ E I FF+ +M G + G D V
Sbjct: 266 GAFP-------PSNPVRQNNRLYIGGIKEDMQENQIQDFFNNLMKE-KGMADGKEDPVKQ 317
Query: 74 VYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPN 133
IN+++ FAF+E+ T E+A+ A+ LDG++ +G ++RVRRP DY A + P
Sbjct: 318 CQINNDRNFAFIELHTPEQATAALELDGVVLDGASLRVRRPKDY-----AGIDP------ 366
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
L G+ + ++ A+ P+++F+GG+P Y + Q+ ELL+SFG L F+LVK+ G S
Sbjct: 367 LLQTFNGIVAPSV--ADSPNKLFIGGIPTYLNDEQVMELLKSFGELKSFNLVKE-SAGVS 423
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE----QESILAQAQQ 249
KG+ F Y DP VTD+A L+ +GD+ L V+RA + L+QA
Sbjct: 424 KGFAFAEYLDPEVTDMAIQGLHNFALGDRNLVVQRAAVGRNTGVNAPIPGSAAYLSQAIP 483
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
H+ TS +V+ L +T + L +D++Y +I+ED+ +EC
Sbjct: 484 HLMQNNADAPTS-----------------RVMLLLNMVTPEELYNDDDYNDIIEDINDEC 526
Query: 310 GKYGTLVNVVIPRP-------------------DQNGGETPGVGKVFLEYYDAVGCATAK 350
KYG + V IPRP ++ + GVG+V++ Y D A
Sbjct: 527 SKYGEIEGVRIPRPVPKSKKWESTEAAAATAERNKRTDDEAGVGRVYVMYKDVESTKKAM 586
Query: 351 NALSGRKFGGNTVNAFYYPEDKYF 374
+A+ GR+F G T+ PE+++
Sbjct: 587 DAIGGRQFAGRTILVANVPEEEFL 610
>gi|310793965|gb|EFQ29426.1| U2 snRNP auxilliary factor [Glomerella graminicola M1.001]
Length = 549
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 182/355 (51%), Gaps = 41/355 (11%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R+ + LPP A E+ I FF+ + G N D + ++ + FA VE R
Sbjct: 221 SRQAKRLLINNLPPSATEEGIQNFFNLQLN--GLNIIESTDPCTSCQVSKDHSFAVVEFR 278
Query: 89 TVEEASNAMALDGIIFE------GVAVR----VRRPTDYNPTLAAALGPGQPSPNLNLAA 138
EA+ A+ALDGI E G A +RRP DY P +P
Sbjct: 279 NASEATVALALDGISMEAEDATNGAAADQGLVIRRPKDYIVPAVVDDVPYEP-------- 330
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
G+ S + + +++ V +P Y +E Q+ ELL SFG L F LV+D+ T S+G F
Sbjct: 331 -GVVSNVV--VDTHNKISVANMPVYLSEEQVSELLVSFGELKAFVLVRDKSTEESRGIAF 387
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y DPA TD+A LNG+ +GDK L V++A+ Q + + +
Sbjct: 388 CEYVDPAATDVAIQGLNGMDLGDKRLKVQKASVGVTQ-----------------VAGVEM 430
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
+ M+ L G S E +VL L +T + L D+++YEEI ED++EEC K+GT+++V
Sbjct: 431 GVAAMSMLAGTTSTDSEE-TRVLQLLNMVTPEELMDNDDYEEIKEDVQEECAKFGTVLDV 489
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
IPRP ++ GVGK+F+++ A AL+GRKF TV Y+PE+ +
Sbjct: 490 KIPRPVGGSRQSAGVGKIFVKFETKEAAKKALQALAGRKFADRTVVTTYFPEENF 544
>gi|361132025|gb|EHL03640.1| putative Splicing factor U2AF 50 kDa subunit [Glarea lozoyensis
74030]
Length = 568
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 194/387 (50%), Gaps = 51/387 (13%)
Query: 7 PFGATQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLA-NEQAIATFFSQVMTAI 60
P ++L A P +T A +R A+R+ V LP + +E+AI FF+ M
Sbjct: 208 PMDPSKLQAIMAQPSGSVTNAALKPSNSRQAKRLLVHNLPSTSISEEAIINFFNLQMN-- 265
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGV------------- 107
G N D ++ I+ +K FA +E +T +A+ A+A DGI +
Sbjct: 266 GLNIVEGSDPCISAQISKDKSFALLEFKTPSDATLALAFDGITMDDSEYVNREANGGDTK 325
Query: 108 AVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTET 167
+ +RRP DY + P +P G+ S + + +++ + +P Y T+
Sbjct: 326 GLSIRRPKDYIVPAVSDETPQEP---------GVVSSVV--VDTQNKICMSNVPLYLTDE 374
Query: 168 QIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV-TDIACAALNGLKMGDKTLTV 226
Q+ ELL SFG L F LVKD TG S+G FC Y DPA TDIA LNG+++GDK L V
Sbjct: 375 QVIELLTSFGELKAFVLVKDNSTGESRGIAFCEYADPAAATDIAVEGLNGMELGDKHLRV 434
Query: 227 RRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEA 286
+RA+ + Q + + + + M+ L G S G +VL L
Sbjct: 435 QRASIGNTQ-----------------VSGLEMGVNAMSMLAGTTSA-GLEDGRVLQLLNM 476
Query: 287 ITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGC 346
+T + L D+++YEEI ED++EEC KYG ++++ +PRP ++ GVGK+F+++
Sbjct: 477 VTPEELVDNDDYEEICEDVKEECEKYGKVLDMKVPRPTGGSRQSNGVGKIFVKFDTPESA 536
Query: 347 ATAKNALSGRKFGGNTVNAFYYPEDKY 373
A AL+GRKF TV Y+ E+ +
Sbjct: 537 GKALRALAGRKFADRTVVTTYFSEENF 563
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 179/350 (51%), Gaps = 38/350 (10%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R+ LPP+ E+ I +FFS + ++ + + ++ VY+N A +E R
Sbjct: 248 SRQAKRLLCQNLPPMCTEETIYSFFSSFLKSLNAVDSE-NEPLITVYLNPTGTMAMLEFR 306
Query: 89 TVEEASNAMALDGIIFEGVAVRVR--RPTDY---NPTLAAALGPGQPSPNLNLAAVGLAS 143
+ A+ +A DG+ F+ V++R RP DY + ++ G SPN+
Sbjct: 307 STAYATLCLAFDGMEFDDTEVKIRLSRPKDYIIPQYSESSESHNGDISPNV--------- 357
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
+ +++ V +P + + Q+ ELL++FG L F LVKD++ SKG FC Y D
Sbjct: 358 -----PDSINKICVSNIPTHLADQQVMELLQTFGPLKSFFLVKDKEMDESKGVAFCEYLD 412
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGM 263
P + +IA LNGL + ++ L V+RA+ QS A A+ I + T+
Sbjct: 413 PNIAEIAIEGLNGLDINEQLLNVKRASIGVKQS--------AGAEAGIPAMTVIAATTSA 464
Query: 264 NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP 323
GG +VL L +TAD L D EEYEEILED+ +EC K+G ++++ IPRP
Sbjct: 465 EMEGG----------RVLQLLNMVTADELLDQEEYEEILEDVTDECNKFGPIIDIKIPRP 514
Query: 324 DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
N GVGK+++ + + A +L+GRKF TV Y+ E+ Y
Sbjct: 515 SGNQRAAAGVGKIYVRFEEHESAEKALKSLAGRKFADRTVIVSYFSEENY 564
>gi|307106531|gb|EFN54776.1| hypothetical protein CHLNCDRAFT_58050 [Chlorella variabilis]
Length = 354
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 138/229 (60%), Gaps = 29/229 (12%)
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ GA+ +R+F+GGLPYY TE Q +ELL SFG + FDLVKD++TG SKGYGFCVY+DP
Sbjct: 148 MSGADAAERIFIGGLPYYLTEEQCRELLASFGAIKSFDLVKDKETGQSKGYGFCVYEDPR 207
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
VTD+AC LNG++MGD+TLTVRRAT Q +++
Sbjct: 208 VTDVACQGLNGMRMGDRTLTVRRATEGQRQQAEQKQQ----------------------- 244
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI-PRPD 324
++ A+V+ L+ A+T + L DD+EY +I+EDM+EECGKYGT+V V I
Sbjct: 245 -----DMYVGNTARVVKLSHAVTLEELGDDQEYGDIMEDMKEECGKYGTVVQVHIPRPAP 299
Query: 325 QNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ PG+GK+ +E+ + A+NA+ GRKFGG V A + Y
Sbjct: 300 PSAPPPPGLGKIIIEFAETPAAMAARNAMHGRKFGGRVVEAVMMGDSDY 348
>gi|195585954|ref|XP_002082743.1| GD25073 [Drosophila simulans]
gi|194194752|gb|EDX08328.1| GD25073 [Drosophila simulans]
Length = 445
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 191/368 (51%), Gaps = 46/368 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP----GDAVVNVYINHEKKFAF 84
TR ARR+YVG +P E+ + FF+ +TA+G + G AV+ N EK FAF
Sbjct: 103 TRQARRLYVGNIPFGVTEEEMMQFFNHRITALGYEAKSSHYMDGKAVLTCQTNLEKNFAF 162
Query: 85 VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP-------------S 131
+E R+++EA+ A+ DG++F G +++RRP DY P + + +
Sbjct: 163 LEFRSIDEATQALNFDGMVFRGQTLKIRRPHDYQPVPSISFSAMENYRSFRVPDTTIANP 222
Query: 132 PNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTG 191
PN+ + + + P++++VGGLP + Q+KELL+SFG L G +LV D +T
Sbjct: 223 PNVTIPVTTIV------PDSPNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDGNTS 276
Query: 192 NSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI 251
+KG+ F Y DP VTD A A L+G+ +GD+ L V+R+ + H
Sbjct: 277 LNKGFAFFEYYDPLVTDHAIAGLHGMLLGDRRLVVQRSIPGGKNA----------FPGHT 326
Query: 252 AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
A +Q G++TL L + + LCL + + L DDEE+E+I D+++EC K
Sbjct: 327 A---PVVQVPGISTL-----LDPGSPTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAK 378
Query: 312 YGTLVNVVIPRPDQNGGETP--GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
+G + ++ IPRP G P G GKVF+++ A ALSGRKF V YY
Sbjct: 379 FGEVRSIKIPRPI---GPFPKRGCGKVFVQFESVEDSQKALKALSGRKFSDRIVMTSYYD 435
Query: 370 EDKYFNKD 377
+KY D
Sbjct: 436 PEKYLADD 443
>gi|406867695|gb|EKD20733.1| U2 snRNP auxilliary factor [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 613
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 193/399 (48%), Gaps = 67/399 (16%)
Query: 7 PFGATQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
P ++L AF P +T A +R A+R+ V LPP NE+AI FF+ + G
Sbjct: 239 PMDPSKLQAFMSQPSGSVTNAALKPSNSRQAKRLLVSNLPPTVNEEAIVNFFNLQLN--G 296
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE-----GVA-------V 109
N D V+ I+ +K FA +E + +A+ A+ALDGI E G A +
Sbjct: 297 LNVIEGSDPCVSAQISKDKTFALLEFKQTSDATIALALDGITMEDEHMNGSATNGDTQGL 356
Query: 110 RVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQ 168
+RRP DY PT+ + G+ S + + +++ + +P Y T+ Q
Sbjct: 357 SIRRPKDYIVPTIT----------DETPFEAGVISNVV--VDTQNKISISNIPLYLTDEQ 404
Query: 169 IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
+ ELL SFG L F LVKD T S+G FC Y DP TDIA LNG+++GDK L V+R
Sbjct: 405 VTELLVSFGELKAFVLVKDNGTDESRGIAFCEYVDPVATDIAVEGLNGMELGDKHLKVQR 464
Query: 229 ATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAIT 288
A+ H + + + + M+ L G S G +VL L +T
Sbjct: 465 ASIG-----------------HTQVSGLEMSVNAMSMLAGTTSQ-GLEEGRVLQLLNMVT 506
Query: 289 ADALADDEEYE-----------------EILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
+ L D+E+YE EI ED++EEC KYG ++++ +PRP ++
Sbjct: 507 PEELIDNEDYEGTILLTTLIQSLLTMYPEICEDVKEECEKYGKVLDMKVPRPTGGSRQSN 566
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
GVGK+++++ ++ A L+GRKF TV Y+ E
Sbjct: 567 GVGKIYVKFDNSDSAGKALRTLAGRKFADRTVVVTYFSE 605
>gi|154280004|ref|XP_001540815.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412758|gb|EDN08145.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 571
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 190/372 (51%), Gaps = 58/372 (15%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V+ +R A+R++V LP A E+++ FF+ + G N D V ++++K F
Sbjct: 232 VLKPSNSRQAKRLFVHNLPSSATEESLVQFFNLQLN--GLNVIKGVDPCVTAQLSNDKTF 289
Query: 83 AFVEMRTVEEASNAMALDGIIFE---------------GVAVRVRRPTDYNPTLAAALGP 127
A VE R + + A+A DGI E + +RRP DY L +A+
Sbjct: 290 ALVEFRNAADTTVALAFDGITMEDNDEMDTTNGNSNGSNQGLSIRRPKDY--ILPSAVE- 346
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
G+P G+ S + + P+++ V +P + E + LL SFG L F LVKD
Sbjct: 347 GEPH------QEGVVSNVV--PDSPNKICVSNIPPFIEEEPVTMLLVSFGELKSFVLVKD 398
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
+TG S+G FC Y+DP TDIA LNG+++G+K L V RA+ + Q+
Sbjct: 399 SETGESRGIAFCEYRDPMSTDIAVENLNGMELGNKKLKVVRASIGTTQA----------- 447
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEI 301
+G++ MS++ +T + +VL L +T + L D+++YEEI
Sbjct: 448 -------------AGLDMGVNAMSMYAKTTSQDIEASRVLQLLNMVTTEELIDNDDYEEI 494
Query: 302 LEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
+D+R+EC KYG +V + +PRP N ++ GVGK+++++ ++ A AL+GRKF
Sbjct: 495 CDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIYVKFDNSESATKALRALAGRKFQDR 554
Query: 362 TVNAFYYPEDKY 373
TV Y+ E+ +
Sbjct: 555 TVVTTYFSEENF 566
>gi|240279650|gb|EER43155.1| splicing factor u2af large subunit [Ajellomyces capsulatus H143]
gi|325092783|gb|EGC46093.1| splicing factor u2af large subunit [Ajellomyces capsulatus H88]
Length = 572
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 191/372 (51%), Gaps = 58/372 (15%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V+ +R A+R++V LP A E+++ FF+ + G N D V ++++K F
Sbjct: 233 VLKPSNSRQAKRLFVHNLPSSATEESLVQFFNLQLN--GLNVIKGVDPCVTAQLSNDKTF 290
Query: 83 AFVEMRTVEEASNAMALDGIIFE---------------GVAVRVRRPTDYNPTLAAALGP 127
A +E R + + A+A DGI E + +RRP DY L +A+
Sbjct: 291 ALLEFRNAADTTVALAFDGITMEDNDEMDTTNGDSNGSNQGLSIRRPKDY--ILPSAVE- 347
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
G+P+ G+ S + + P+++ V +P + E + LL SFG L F LVKD
Sbjct: 348 GEPN------QEGVVSNVV--PDSPNKICVSNIPPFIEEEPVTMLLVSFGELKSFVLVKD 399
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
+TG S+G FC Y+DP TDIA LNG+++G+K L V RA+ + Q+
Sbjct: 400 SETGESRGIAFCEYRDPMSTDIAVENLNGMELGNKKLKVVRASIGTTQA----------- 448
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEI 301
+G++ MS++ +T + +VL L +T + L D+++YEEI
Sbjct: 449 -------------AGLDMGVNAMSMYAKTTSQDIEASRVLQLLNMVTTEELIDNDDYEEI 495
Query: 302 LEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
+D+R+EC KYG +V + +PRP N ++ GVGK+++++ ++ A AL+GRKF
Sbjct: 496 CDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIYVKFDNSESATKALRALAGRKFQDR 555
Query: 362 TVNAFYYPEDKY 373
TV Y+ E+ +
Sbjct: 556 TVVTTYFSEENF 567
>gi|221059061|ref|XP_002260176.1| U2 snRNP auxiliary factor [Plasmodium knowlesi strain H]
gi|193810249|emb|CAQ41443.1| U2 snRNP auxiliary factor, putative [Plasmodium knowlesi strain H]
Length = 865
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 192/371 (51%), Gaps = 24/371 (6%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA---GPGDAVVNVYI-----NH 78
+ + R++Y+G +PP + ++ + FF+ + +I +S+ GD V+ + N
Sbjct: 489 EGDKKQRKLYIGNIPPNSKQEELIDFFNNTLGSIIKDSSLEIKIGDIVLMPILKCEIFNV 548
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY------NPTLAAALGPGQPSP 132
E +F F+E R++E + LD I F A+R+ RP D+ +P L Q
Sbjct: 549 ESRFCFLEFRSLEITWLCLRLDAITFNNYALRIARPHDFVPPPGGDPALTVVFTDIQHEV 608
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
+ + +A G + +++++ LP+ + QI++LL+ FG L GF+++KD+ TG
Sbjct: 609 FEMVKPIKIAPVRSTGDDD-NKLYIQNLPHDLGDVQIRDLLQQFGKLKGFNVIKDQSTGL 667
Query: 193 SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI- 251
+KGYGF Y+D T IA ALNG G L+V++AT Q+ T+ + ++ +
Sbjct: 668 NKGYGFFEYEDSNCTPIAMHALNGFVCGQNILSVKKATFGKSQNSTQNANTISLGSGSVD 727
Query: 252 --------AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
+I + L S + GE ++V+ LT A+ + L D +YEEIL
Sbjct: 728 LPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVVQLTNAVFQEDLIIDSQYEEILR 787
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
D++EE KYG L N+VIP+P+++ T GVGK+FL Y D A+ +GR F V
Sbjct: 788 DIKEEAEKYGPLQNIVIPKPNKDLSYTEGVGKIFLHYADETTARKAQYMFNGRLFEKRVV 847
Query: 364 NAFYYPEDKYF 374
A +Y E+K+
Sbjct: 848 CAAFYSEEKFL 858
>gi|295663747|ref|XP_002792426.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279096|gb|EEH34662.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 567
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 198/390 (50%), Gaps = 64/390 (16%)
Query: 11 TQLGAFPLMPV------QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNS 64
++L AF PV V+ +R A+R++V +PP A E+++ FF+ + G N
Sbjct: 210 SRLQAFMNQPVPGISTNTVLRPSNSRQAKRLFVHNIPPSATEESLVQFFNLQLN--GLNV 267
Query: 65 AGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVA---------------V 109
D V+ ++ ++ F +E ++ +A+ A+A DGI E +
Sbjct: 268 IKGVDPCVSAQLSKDRSFGLLEFKSSADATVALAFDGITMEDTGDMDTSNGEANGSNQGL 327
Query: 110 RVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQI 169
+RRP DY +G G+ P+ G+ S + + P+++ V +P + E +
Sbjct: 328 SLRRPKDY----ILPVG-GEEEPHRE----GVVSNVV--PDTPNKICVSNIPPFIEEEPV 376
Query: 170 KELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRA 229
LL SFG L F LVKD +TG S+G FC Y DP TDIA LNG+++G+K L V RA
Sbjct: 377 TMLLVSFGELKSFVLVKDSETGESRGIAFCEYLDPMSTDIAVENLNGMELGNKRLKVVRA 436
Query: 230 TASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVLCL 283
+ + +Q +G++ MS++ +T + +VL L
Sbjct: 437 SIGT------------------------IQATGLDMGINAMSMYAKTTSQDIEAGRVLQL 472
Query: 284 TEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDA 343
+T D L D+++YEEI +D+R+EC KYG +V + +PRP N ++ GVGK+++++ ++
Sbjct: 473 LNMVTTDELLDNDDYEEICDDVRDECSKYGQVVELKVPRPTGNNKQSAGVGKIYVKFDNS 532
Query: 344 VGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ A AL+GRKF TV Y+ E+ +
Sbjct: 533 ESASKALKALAGRKFQDRTVVTTYFSEENF 562
>gi|261196608|ref|XP_002624707.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239595952|gb|EEQ78533.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609528|gb|EEQ86515.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ER-3]
gi|327350238|gb|EGE79095.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 570
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 185/372 (49%), Gaps = 58/372 (15%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V+ +R A+R++V LPP A E+ + FF+ + G N D ++ ++ +K F
Sbjct: 231 VLKPSNSRQAKRLFVHNLPPSATEERLVQFFNLQLN--GLNVIKGVDPCLSAQLSRDKTF 288
Query: 83 AFVEMRTVEEASNAMALDGIIFE---------------GVAVRVRRPTDYNPTLAAALGP 127
A +E R + + A+A DGI E + +RRP DY A P
Sbjct: 289 ALLEFRNAADTTVALAFDGITMEDSGEMDTSNGDVDGPSQGLSIRRPKDYILPSAVEEEP 348
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
Q G+ S + + P+++ V +P + E + LL SFG L F LVKD
Sbjct: 349 QQE---------GVVSNVV--PDSPNKICVSNIPPFIEEEPVTMLLVSFGELKSFILVKD 397
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
+TG S+G FC Y DP T+IA LNG+++G+K L V RA+ + Q+
Sbjct: 398 SETGESRGIAFCEYLDPTSTEIAVENLNGMELGNKRLKVVRASVGTTQA----------- 446
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEI 301
+G++ MS++ +T + +VL L +T + L D+++YEEI
Sbjct: 447 -------------AGLDMGVNAMSMYAKTTSQDIEASRVLQLLNMVTTEELMDNDDYEEI 493
Query: 302 LEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
+D+R+EC KYG +V + +PRP N ++ GVGK+++E+ ++ A AL+GRKF
Sbjct: 494 CDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIYVEFDNSESATKALKALAGRKFQDR 553
Query: 362 TVNAFYYPEDKY 373
TV Y+ E+ +
Sbjct: 554 TVVTTYFSEENF 565
>gi|225562835|gb|EEH11114.1| splicing factor u2af large subunit [Ajellomyces capsulatus G186AR]
Length = 571
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 190/372 (51%), Gaps = 58/372 (15%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V+ +R A+R++V LP A E+++ FF+ + G N D V ++++K F
Sbjct: 232 VLKPSNSRQAKRLFVHNLPSSATEESLVQFFNLQLN--GLNVIKGVDPCVTAQLSNDKTF 289
Query: 83 AFVEMRTVEEASNAMALDGIIFE---------------GVAVRVRRPTDYNPTLAAALGP 127
A +E R + + A+A DGI E + +RRP DY L +A+
Sbjct: 290 ALLEFRNAADTTVALAFDGITMEDNDDMDTTNGDSNGSNQGLSIRRPKDY--ILPSAVE- 346
Query: 128 GQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
G+P G+ S + + P+++ V +P + E + LL SFG L F LVKD
Sbjct: 347 GEPH------QEGVVSNVV--PDSPNKICVSNIPPFIEEEPVTMLLVSFGELKSFVLVKD 398
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
+TG S+G FC Y+DP TDIA LNG+++G+K L V RA+ + Q+
Sbjct: 399 SETGESRGIAFCEYRDPMSTDIAVENLNGMELGNKKLKVVRASIGTTQA----------- 447
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEI 301
+G++ MS++ +T + +VL L +T + L D+++YEEI
Sbjct: 448 -------------AGLDMGVNAMSMYAKTTSQDIEASRVLQLLNMVTTEELIDNDDYEEI 494
Query: 302 LEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
+D+R+EC KYG +V + +PRP N ++ GVGK+++++ ++ A AL+GRKF
Sbjct: 495 CDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGKIYVKFDNSESATKALRALAGRKFQDR 554
Query: 362 TVNAFYYPEDKY 373
TV Y+ E+ +
Sbjct: 555 TVVTTYFSEENF 566
>gi|225677913|gb|EEH16197.1| splicing factor U2AF 65 kDa subunit ) [Paracoccidioides
brasiliensis Pb03]
gi|226287345|gb|EEH42858.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 567
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 198/390 (50%), Gaps = 64/390 (16%)
Query: 11 TQLGAFPLMPV------QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNS 64
++L AF PV V+ +R A+R++V +PP A E+++ FF+ + + N
Sbjct: 210 SRLQAFMNQPVPGTSINTVLRPSNSRQAKRLFVHNIPPSATEESLVQFFNLQLNGL--NV 267
Query: 65 AGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVA---------------V 109
D V+ ++ ++ F +E ++ +A+ A+A DGI E +
Sbjct: 268 IKGVDPCVSAQLSKDRSFGLLEFKSSADATVALAFDGITMEDTGDMDTSNGEANGSNQGL 327
Query: 110 RVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQI 169
+RRP DY +G G+ P+ G+ S + + P+++ V +P + E +
Sbjct: 328 SLRRPKDY----ILPVG-GEEEPHRE----GVVSNVV--PDTPNKICVSNIPPFIEEEPV 376
Query: 170 KELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRA 229
LL SFG L F LVKD +TG S+G FC Y DP TDIA LNG+++G+K L V RA
Sbjct: 377 TMLLVSFGELKSFVLVKDSETGESRGIAFCEYLDPMSTDIAVENLNGMELGNKRLRVVRA 436
Query: 230 TASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVLCL 283
+ + +Q +G++ MS++ +T + +VL L
Sbjct: 437 SIGT------------------------IQATGLDMGINAMSMYAKTTSQDIEAGRVLQL 472
Query: 284 TEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDA 343
+T D L D+++YEEI +D+R+EC KYG +V + +PRP N ++ GVGK+++++ ++
Sbjct: 473 LNMVTTDELLDNDDYEEICDDVRDECSKYGQVVELKVPRPTGNNKQSAGVGKIYVKFDNS 532
Query: 344 VGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ A AL+GRKF TV Y+ E+ +
Sbjct: 533 ESASKALKALAGRKFQDRTVVTTYFSEENF 562
>gi|70946422|ref|XP_742927.1| U2 snRNP auxiliary factor [Plasmodium chabaudi chabaudi]
gi|56522174|emb|CAH84932.1| U2 snRNP auxiliary factor, putative [Plasmodium chabaudi chabaudi]
Length = 561
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 199/404 (49%), Gaps = 42/404 (10%)
Query: 4 NMLPFGAT-QLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG 62
N+LP QLG P + + R++Y+G LPP + ++ I FF+ +++I
Sbjct: 168 NLLPGNKMPQLGRNP------YELEGDKKQRKLYIGNLPPNSKQEEIVEFFNNTLSSIIK 221
Query: 63 NSA---GPGDA----VVNVYI-NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRP 114
S+ GD VV I N + +F F+E RT++ ++ LD + + +R+ RP
Sbjct: 222 GSSLEVKIGDVQLLPVVKCEIFNPDSRFCFLEFRTMDITWLSLKLDSMSYNNYCLRINRP 281
Query: 115 TDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGP------------DRVFVGGLPY 162
DY P P + P L + + G + + P +++++ LP+
Sbjct: 282 HDYMP-------PPEGDPALTVVFPDIDMGLLESFKPPKIAPVRSTGDDDNKLYIQNLPH 334
Query: 163 YFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDK 222
+ QI +LL FG L GF+++KD +TG +KGYGF Y+D + T +A ALNG G
Sbjct: 335 DLKDDQIMDLLGQFGKLKGFNIIKDLNTGLNKGYGFFEYEDSSCTQVAIHALNGFVCGKN 394
Query: 223 TLTVRRATASSGQSKTEQESILAQAQQ--------HIAIQKMALQTSGMNTLGGGMSLFG 274
L V++AT + + + +A A +I + L S + G
Sbjct: 395 ILNVKKATFNKNPNNIPNPNNIALANNVDVPVSLLPNSISQKILSNSIIGLQIQASRKIG 454
Query: 275 ETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
E ++V+ LT A+ + L + +YEEIL+D++EE KYGTL ++VIP+P+ + T GVG
Sbjct: 455 EKSSRVIQLTNAVFQEDLIINSQYEEILKDVKEEAEKYGTLQSIVIPKPNIDLSYTEGVG 514
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
K+FL Y D A+ +GR F V A +Y EDK+ Y
Sbjct: 515 KIFLHYADETAARKAQYMFNGRLFEKRVVCASFYSEDKFLEGKY 558
>gi|384246661|gb|EIE20150.1| hypothetical protein COCSUDRAFT_30785 [Coccomyxa subellipsoidea
C-169]
Length = 212
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 132/202 (65%), Gaps = 3/202 (1%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
A R ARR+YVGGLPP + + + +++M + GG A G + + I EK +AF+E
Sbjct: 6 AARPARRIYVGGLPPETTDADLRQYINELMVSTGG-CAATGYPIASCKIYTEKSYAFLEF 64
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIG 147
R+VEEASN MA DG+ F+ +RVRRP +Y+ +A LGP P P ++++ + + +
Sbjct: 65 RSVEEASNCMAFDGVAFKDSYLRVRRPNNYDINVAVMLGPTDPDPTMDVSNLDIVKTVV- 123
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
+ P ++F+GGLP +TE Q+KELL FG+L F+LV D++TGNSKGY FC YQD +T
Sbjct: 124 -QDSPHKLFIGGLPCDWTEDQVKELLLPFGSLKAFNLVMDKNTGNSKGYAFCEYQDIGLT 182
Query: 208 DIACAALNGLKMGDKTLTVRRA 229
D LNG ++G+K LTV+RA
Sbjct: 183 DYVIQNLNGKQIGNKFLTVKRA 204
>gi|119592808|gb|EAW72402.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_a [Homo
sapiens]
Length = 376
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 151/249 (60%), Gaps = 15/249 (6%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D VTD A A LNG+++GDK L V+RA+ + + ++++ QH
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLVSPPAQHHQSDACDPA 360
Query: 260 TSGMNTLGG 268
++G++ L G
Sbjct: 361 SAGLDELPG 369
>gi|367020820|ref|XP_003659695.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
gi|347006962|gb|AEO54450.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
Length = 567
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 185/358 (51%), Gaps = 43/358 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R+ V LPP A E+++ FF+ + G N D + +I ++ FA +E R
Sbjct: 235 SRQSKRLIVSNLPPSATEESLVNFFNLQLN--GLNVIETADPCLQAHIAPDRSFAMLEFR 292
Query: 89 TVEEASNAMALDGIIFEGVA-------------VRVRRPTDYNPTLAAALGPGQPSPNLN 135
+A+ A+ALDGI E + +RRP DY + A + PN +
Sbjct: 293 HNTDATVALALDGITMEAEDADAANGNGAATQGLHLRRPKDY--IVPAVVE----DPNYD 346
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ +S + + P+++ V LP Y T+ Q+ ELL SFG L F LVKD T S+G
Sbjct: 347 PDSDTPSSVVL---DSPNKISVTNLPLYLTDDQVMELLVSFGKLKSFVLVKDNGTQESRG 403
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
F Y DP+ T++A LN + +G++ L V++A+ + Q + +
Sbjct: 404 IAFLEYADPSATNVAVQGLNNMMLGERALKVQKASIG-----------ITQVSGEMGVNA 452
Query: 256 MALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL 315
M++ M+ GG ++VL L +T + L D+++YEEI ED++EEC K+G +
Sbjct: 453 MSMLAGTMSADAGG--------SRVLQLLNMVTPEELMDNDDYEEIREDVQEECQKFGKI 504
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+++ IPRP ++ GVGK++++Y A A AL+GRKF TV Y+PE+ +
Sbjct: 505 LSLKIPRPVGGSRQSAGVGKIYIKYETAESATKALRALAGRKFADRTVVTTYFPEENF 562
>gi|258576333|ref|XP_002542348.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902614|gb|EEP77015.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 621
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 181/359 (50%), Gaps = 54/359 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++V LPP +E +A FF+ + G N D ++ ++ + KFA +E +
Sbjct: 220 SRQAKRLFVHNLPPSVSEDTLAQFFNLQLN--GLNVISGVDPCISAQVSSDGKFALLEFK 277
Query: 89 TVEEASNAMALDGIIFE-----------GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA 137
T +A+ A+ALDGI E G + ++RP DY A Q
Sbjct: 278 TASDATVALALDGISLEHDDANGTSSAPGQGLSLKRPKDYIVPSEADDSNRQD------- 330
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
G+ S + + P+++ V +P + E Q+ LL SFG L F LVKD T S+G
Sbjct: 331 --GVVSNEV--PDSPNKICVTNIPPFIQEEQVTMLLVSFGELKSFVLVKDSGTDESRGIA 386
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA 257
FC Y DP+ T+IA LNG+++GDK L V RA+ A
Sbjct: 387 FCEYVDPSSTNIAVEGLNGMELGDKRLKVTRASIG------------------------A 422
Query: 258 LQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECGK 311
Q +G++ MS+F +T + +VL L +TA+ L D +EYEEI +D+REEC K
Sbjct: 423 TQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTAEELMDSDEYEEICDDVREECSK 482
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
YG ++++ IPRP + GVGK+++++ + A AL+GRKF TV ++ E
Sbjct: 483 YGQVLDLKIPRPTGGSRQAAGVGKIYVKFDSYDSASKAMKALAGRKFQDRTVVTTFFSE 541
>gi|119592809|gb|EAW72403.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_b [Homo
sapiens]
Length = 356
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 136/211 (64%), Gaps = 10/211 (4%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
Y D VTD A A LNG+++GDK L V+RA+
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRAS 336
>gi|148699340|gb|EDL31287.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2,
isoform CRA_b [Mus musculus]
Length = 356
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 136/211 (64%), Gaps = 10/211 (4%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 247
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 248 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 305
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
Y D VTD A A LNG+++GDK L V+RA+
Sbjct: 306 EYVDINVTDQAIAGLNGMQLGDKKLLVQRAS 336
>gi|259480265|tpe|CBF71237.1| TPA: splicing factor u2af large subunit (AFU_orthologue;
AFUA_7G05310) [Aspergillus nidulans FGSC A4]
Length = 547
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 179/361 (49%), Gaps = 54/361 (14%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++V LPP A + + +FF+ + G N D ++ I+ + FA +E +
Sbjct: 220 SRQAKRLFVYNLPPNATVENLVSFFNLQLN--GLNVIQSVDPCISAQISDDHSFALLEFK 277
Query: 89 TVEEASNAMALDGIIF--------EGVA--VRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+ + + A+ALDGI G A + VRRP DY PNL
Sbjct: 278 SPNDTTVALALDGITMGEHESNGENGAAKGLEVRRPKDYI------------VPNLAEQD 325
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
+ ASG + P+++ V +P Y E + LL+SFG L F LVKD T S+G F
Sbjct: 326 LEGASGMKDVPDSPNKICVSNIPQYIPEEPVTMLLKSFGELKSFVLVKDSSTEESRGIAF 385
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y DP T IA LNG+++GD+ L V RA+
Sbjct: 386 CEYADPNTTTIAVQGLNGMELGDRHLKVVRASIG------------------------MT 421
Query: 259 QTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECGKY 312
Q +G++ MS+F +T + +VL L +T + L D+E+YEEI +D+R+EC K+
Sbjct: 422 QAAGLDMGVNAMSMFAKTTSQDLESSRVLQLLNMVTPEELMDNEDYEEICDDVRDECSKF 481
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
G ++ + IPRP ++PGVGK+F+++ A +L+GRKF TV Y+ E+
Sbjct: 482 GRVLELKIPRPTGGSRQSPGVGKIFVKFETIEATTAALKSLAGRKFSDRTVVTTYFSEEN 541
Query: 373 Y 373
+
Sbjct: 542 F 542
>gi|453082700|gb|EMF10747.1| hypothetical protein SEPMUDRAFT_48483 [Mycosphaerella populorum
SO2202]
Length = 432
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 200/389 (51%), Gaps = 55/389 (14%)
Query: 7 PFGATQLGAFPLMP-----VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
P +L AF P + + R ++RV V LPP A ++++ FF+ + G
Sbjct: 75 PMDPAKLQAFMNQPGNQASSSALKPSSARQSKRVMVHNLPPSATDESMVDFFNLQLN--G 132
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVA------------- 108
N D ++ + +K +A VE +T E+A+NAMALDGI + A
Sbjct: 133 LNITRGVDPCISAQCSKDKTYALVEFKTPEDATNAMALDGITMDHDAMDTSGASNGAPKG 192
Query: 109 VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQ 168
++++RP DY + P N + GL S + + +++ + LP + E Q
Sbjct: 193 LQIKRPRDY-------IVPNVIDETENES--GLLSNTVPDTQ--NKISITNLPSFLAEEQ 241
Query: 169 IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
I+ELL SFG L F LV+++ +G S+G FC Y+DP+VT +A +LNG+++ D + V+
Sbjct: 242 IQELLMSFGELKSFVLVRNQSSGESRGIAFCEYKDPSVTKVAVDSLNGMELADTAMRVKL 301
Query: 229 ATASSGQSKTEQESILAQAQQHIAIQKMALQTS--GMNTLGGGMSLFGETLAKVLCLTEA 286
A+ I IQ+++ + S M+ + G S + +VL L
Sbjct: 302 AS--------------------IGIQQVSSEMSVNAMSLMAGAKSTDADN-GRVLALMNM 340
Query: 287 ITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGC 346
IT + L D ++ +EILED++EEC KYG L+ V +PRP ++ GVGK++L+Y +
Sbjct: 341 ITPEELMDPDDADEILEDVKEECAKYGPLLEVKMPRPTGGSRQSTGVGKIYLKYETSEHA 400
Query: 347 ATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
A A AL+GRKF TV Y+ E+ YF+
Sbjct: 401 AKALAALAGRKFADRTVVVTYFGEE-YFD 428
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 184/359 (51%), Gaps = 45/359 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R+ V LPP A E+++ FF+ + G N D + +I ++ FA +E R
Sbjct: 252 SRQAKRLVVRNLPPSATEESLVNFFNLQLN--GLNVIETTDPCLQAHIAPDRSFAMLEFR 309
Query: 89 TVEEASNAMALDGIIFEGV------------AVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
EA+ A+A DGI + +++ RP DY + A + PN +
Sbjct: 310 NSSEATVALAFDGISMDADDAGANGAEAVHGGLQITRPKDY--IVPAVVE----DPNYDP 363
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
+ +S I + P+++ V +P Y E Q+ ELL SFG L F LVKD T S+G
Sbjct: 364 DSDVPSSVVI---DSPNKISVANIPPYLNEDQVMELLVSFGKLKSFVLVKDNGTQESRGI 420
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
F Y DP+V+++A LN + +G++ L V++A+ I I ++
Sbjct: 421 AFLEYVDPSVSNVAIQGLNDMPLGEQKLKVKKAS--------------------IGITQV 460
Query: 257 A--LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
A + + M+ L G S E ++VL L +T + L D+++YEEI ED+ EEC K+G
Sbjct: 461 AGEMSVNAMSMLAGTTSTHAEASSRVLQLLNMVTPEELMDNDDYEEIREDVLEECKKFGN 520
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
++++ IPRP ++ GVGK+++++ A AL+GRKF TV Y+PE+ Y
Sbjct: 521 VLSLKIPRPIGGNRQSAGVGKIYVKFEQVESATKALRALAGRKFSDRTVVTTYFPEENY 579
>gi|115400045|ref|XP_001215611.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
gi|114191277|gb|EAU32977.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
Length = 413
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 181/361 (50%), Gaps = 57/361 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++V +PP +A+ +FF+ + G N D ++ ++ + FA +E +
Sbjct: 88 SRQAKRLFVYNIPPNVTGEALLSFFNLQLN--GLNVVQSVDPCISAQVSDDHSFALLEFK 145
Query: 89 TVEEASNAMALDGIIFEGVA------------VRVRRPTDYNPTLAAALGPGQPSPNLNL 136
+ EA+ A+A DGI + A + VRRP DY +A Q LN
Sbjct: 146 SPNEATVALAFDGITMDEHASMDGAGKGEVKGLEVRRPKDYIVPNGSADQEYQEGVLLNE 205
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
+ P+++ V +P Y E + LL+SFG L F LVKD T S+G
Sbjct: 206 VP-----------DSPNKICVSNIPQYIQEEAVIMLLKSFGELKSFVLVKDASTEESRGI 254
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
FC Y DP T IA LNG+++GD+ L V RA+ Q+
Sbjct: 255 AFCEYADPTATSIAVEGLNGMEIGDRPLKVVRASIGMTQA-------------------- 294
Query: 257 ALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECG 310
+G++ MS+F +T + +VL L +TA+ L D+++YEEI ED+REEC
Sbjct: 295 ----AGLDMGVNAMSMFAKTTSQDLETSRVLQLLNMVTAEELIDNDDYEEICEDVREECS 350
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT-AKNALSGRKFGGNTVNAFYYP 369
KYG ++ + +PRP ++PGVGK+F++ +D V AT A AL+GRKF TV YY
Sbjct: 351 KYGQVLELKVPRPSGGSRQSPGVGKIFVK-FDTVESATKALKALAGRKFSDRTVVTTYYG 409
Query: 370 E 370
E
Sbjct: 410 E 410
>gi|195346998|ref|XP_002040041.1| GM15574 [Drosophila sechellia]
gi|194135390|gb|EDW56906.1| GM15574 [Drosophila sechellia]
Length = 445
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP----GDAVVNVYINHEKKFAF 84
TR ARR+YVG +P E+ + FF+ + A G + G AV+ + EK FAF
Sbjct: 103 TRQARRLYVGNIPFGVTEEEMMQFFNHRIMAQGYEAKSSHYMDGKAVLTCQTHLEKNFAF 162
Query: 85 VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASG 144
+E R+++EA+ A+ DG+++ G +++RRP DY P + + + + + A +A+
Sbjct: 163 LEFRSIDEATQALNFDGMVYRGQTLKIRRPHDYQPVPSISFSAMENYRSFRVPATTIANP 222
Query: 145 -------AIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
+ P++++VGGLP + Q+KELL+SFG L G +LV D +T +KG+
Sbjct: 223 PNVTIPVTTIVPDSPNKIYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDGNTSLNKGFA 282
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA 257
F Y DP VTD A A L+G+ +GD+ L V+R SI
Sbjct: 283 FFEYYDPLVTDHAIAGLHGMLLGDRRLVVQR-------------SIPGGKNAFPGHTGPV 329
Query: 258 LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVN 317
+Q G++TL L + + LCL + + L DDEE+E+I D+++EC K+G + +
Sbjct: 330 VQVPGISTL-----LDPGSPTETLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRS 384
Query: 318 VVIPRPDQNGGETP--GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
+ IPRP G P G GKVF+++ A ALSGRKF V YY +KY
Sbjct: 385 IKIPRPI---GPFPKRGCGKVFVQFESVEDSQKALKALSGRKFSDRIVMTSYYDPEKYLA 441
Query: 376 KD 377
D
Sbjct: 442 DD 443
>gi|67541022|ref|XP_664285.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
gi|40738434|gb|EAA57624.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
Length = 624
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 177/358 (49%), Gaps = 54/358 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++V LPP A + + +FF+ + G N D ++ I+ + FA +E +
Sbjct: 220 SRQAKRLFVYNLPPNATVENLVSFFNLQLN--GLNVIQSVDPCISAQISDDHSFALLEFK 277
Query: 89 TVEEASNAMALDGIIF--------EGVA--VRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+ + + A+ALDGI G A + VRRP DY PNL
Sbjct: 278 SPNDTTVALALDGITMGEHESNGENGAAKGLEVRRPKDYI------------VPNLAEQD 325
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
+ ASG + P+++ V +P Y E + LL+SFG L F LVKD T S+G F
Sbjct: 326 LEGASGMKDVPDSPNKICVSNIPQYIPEEPVTMLLKSFGELKSFVLVKDSSTEESRGIAF 385
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y DP T IA LNG+++GD+ L V RA+
Sbjct: 386 CEYADPNTTTIAVQGLNGMELGDRHLKVVRASIG------------------------MT 421
Query: 259 QTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECGKY 312
Q +G++ MS+F +T + +VL L +T + L D+E+YEEI +D+R+EC K+
Sbjct: 422 QAAGLDMGVNAMSMFAKTTSQDLESSRVLQLLNMVTPEELMDNEDYEEICDDVRDECSKF 481
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
G ++ + IPRP ++PGVGK+F+++ A +L+GRKF TV Y+ E
Sbjct: 482 GRVLELKIPRPTGGSRQSPGVGKIFVKFETIEATTAALKSLAGRKFSDRTVVTTYFSE 539
>gi|357155772|ref|XP_003577233.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 446
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 124/179 (69%), Gaps = 13/179 (7%)
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
+D VTDIACAALNG+KMGDKTLTVRRA S Q + EQE+IL QAQQ + +QK+ Q
Sbjct: 281 KDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQPRPEQENILLQAQQQVQLQKLVYQVG 340
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
+ T KV+CLT+ +TAD L DDEEYE+I+EDMR E GKYGTLV VVIP
Sbjct: 341 ALPT-------------KVICLTQVVTADELKDDEEYEDIMEDMRLEAGKYGTLVKVVIP 387
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYSA 380
RP +G GVGKVFLEY D G AK A+ GRKFGGN V A +YPE+K+ ++++ A
Sbjct: 388 RPHPSGEPVAGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFSDEEFDA 446
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 94/116 (81%), Gaps = 1/116 (0%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
M NMLPF Q + P Q MTQQATRHARRVYVGGLPP ANEQ++A +F+QVM AI
Sbjct: 173 MFPNMLPFAVGQFNPLVMQP-QAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAI 231
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTD 116
GGN+AGPGDAV+NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+ TD
Sbjct: 232 GGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKDLNVTD 287
>gi|156099808|ref|XP_001615700.1| U2 snRNP auxiliary factor [Plasmodium vivax Sal-1]
gi|148804574|gb|EDL45973.1| U2 snRNP auxiliary factor, putative [Plasmodium vivax]
Length = 914
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 188/371 (50%), Gaps = 24/371 (6%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA---GPGDAVVNVYI-----NH 78
+ + R++Y+G +PP + ++ + FF+ + +I +S+ GD V+ + N
Sbjct: 538 EGDKKQRKLYIGNIPPNSKQEELIDFFNNTLASIIKDSSLEIKIGDIVLLPILKCEIFNV 597
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY------NPTLAAALGPGQPSP 132
E +F F+E R++E + LD I F +R+ RP D+ +P L
Sbjct: 598 ESRFCFLEFRSLEITWLCLRLDAISFNNYCLRIARPHDFVPPPGGDPALTVVFTDINHEV 657
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
+ V +A G + +++++ LP+ + QI++LL+ FG L GF+++KD +TG
Sbjct: 658 FEMVKPVKIAPVRSTGDDD-NKLYIQNLPHDLRDDQIRDLLQQFGKLKGFNIIKDLNTGL 716
Query: 193 SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI- 251
+KGYGF Y+D T IA ALNG G L V++AT Q+ T+ + ++ +
Sbjct: 717 NKGYGFFEYEDSNCTPIAMHALNGFVCGQNILNVKKATFGKSQNSTQNANTISLPTGSVD 776
Query: 252 --------AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
+I + L S + GE ++V+ LT A+ + L D +YEEIL
Sbjct: 777 LPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVVQLTNAVFQEDLLIDSQYEEILR 836
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
D++EE KYG L N+VIP+P ++ T GVGK+FL Y D A+ +GR F V
Sbjct: 837 DIKEEAEKYGPLQNIVIPKPSKDLSYTEGVGKIFLHYADETTARKAQYMFNGRLFEKRVV 896
Query: 364 NAFYYPEDKYF 374
A +Y E+K+
Sbjct: 897 CAAFYSEEKFL 907
>gi|238482353|ref|XP_002372415.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
gi|220700465|gb|EED56803.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
Length = 556
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 189/392 (48%), Gaps = 63/392 (16%)
Query: 7 PFGATQLGAFPLMPVQVMTQQAT------RHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
P ++L AF P + A+ R A+R++V LP A + + +FF+ +
Sbjct: 198 PMDPSRLQAFMSQPGAGTAESASLKPSNSRQAKRLFVSNLPASATGENLLSFFNLQLN-- 255
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVA------------ 108
G N D ++ ++ ++ FA +E +T +A+ A+A DGI +
Sbjct: 256 GLNVIHSVDPCISAQVSDDRSFALLEFKTPNDATVALAFDGITMDESEAAGNGAANGAPQ 315
Query: 109 -VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTET 167
+ VRRP DY PS N G+ + + P+++ V +P+Y E
Sbjct: 316 GLEVRRPKDY----------IVPSGNEQEYQEGVLLNEV--PDSPNKICVSNIPHYIPEE 363
Query: 168 QIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 227
+ LL+SFG L F LVKD T S+G FC Y DP T IA LNG+++GD+ L V
Sbjct: 364 PVTMLLKSFGELKSFVLVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDRHLKVV 423
Query: 228 RATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVL 281
RA+ I I Q +G++ MS+F +T + +VL
Sbjct: 424 RAS--------------------IGI----TQAAGLDMGVNAMSMFAKTTSQDLETSRVL 459
Query: 282 CLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYY 341
L +T + L D+++Y+EI +D+REEC KYG +V + IPRP ++PGVGK+F+++
Sbjct: 460 QLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGKIFVKFD 519
Query: 342 DAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
A AL+GRKF TV Y+ E+ +
Sbjct: 520 SVESTTNALKALAGRKFSDRTVVTTYFSEENF 551
>gi|391864554|gb|EIT73849.1| splicing factor U2AF, large subunit [Aspergillus oryzae 3.042]
Length = 538
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 189/392 (48%), Gaps = 63/392 (16%)
Query: 7 PFGATQLGAFPLMPVQVMTQQAT------RHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
P ++L AF P + A+ R A+R++V LP A + + +FF+ +
Sbjct: 180 PMDPSRLQAFMSQPGAGTAESASLKPSNSRQAKRLFVSNLPASATGENLLSFFNLQLN-- 237
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVA------------ 108
G N D ++ ++ ++ FA +E +T +A+ A+A DGI +
Sbjct: 238 GLNVIHSVDPCISAQVSDDRSFALLEFKTPNDATVALAFDGITMDESEAAGNGAANGAPQ 297
Query: 109 -VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTET 167
+ VRRP DY PS N G+ + + P+++ V +P+Y E
Sbjct: 298 GLEVRRPKDY----------IVPSGNEQEYQEGVLLNEV--PDSPNKICVSNIPHYIPEE 345
Query: 168 QIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 227
+ LL+SFG L F LVKD T S+G FC Y DP T IA LNG+++GD+ L V
Sbjct: 346 PVTMLLKSFGELKSFVLVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDRHLKVV 405
Query: 228 RATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVL 281
RA+ I I Q +G++ MS+F +T + +VL
Sbjct: 406 RAS--------------------IGI----TQAAGLDMGVNAMSMFAKTTSQDLETSRVL 441
Query: 282 CLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYY 341
L +T + L D+++Y+EI +D+REEC KYG +V + IPRP ++PGVGK+F+++
Sbjct: 442 QLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGKIFVKFD 501
Query: 342 DAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
A AL+GRKF TV Y+ E+ +
Sbjct: 502 SVESTTNALKALAGRKFSDRTVVTTYFSEENF 533
>gi|317139209|ref|XP_001817348.2| splicing factor u2af large subunit [Aspergillus oryzae RIB40]
Length = 538
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 189/392 (48%), Gaps = 63/392 (16%)
Query: 7 PFGATQLGAFPLMPVQVMTQQAT------RHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
P ++L AF P + A+ R A+R++V LP A + + +FF+ +
Sbjct: 180 PMDPSRLQAFMSQPGAGTAESASLKPSNSRQAKRLFVSNLPASATGENLLSFFNLQLN-- 237
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVA------------ 108
G N D ++ ++ ++ FA +E +T +A+ A+A DGI +
Sbjct: 238 GLNVIHSVDPCISAQVSDDRSFALLEFKTPNDATVALAFDGITMDESEAAGNGAANGAPQ 297
Query: 109 -VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTET 167
+ VRRP DY PS N G+ + + P+++ V +P+Y E
Sbjct: 298 GLEVRRPKDY----------IVPSGNEQEYQEGVLLNEV--PDSPNKICVSNIPHYIPEE 345
Query: 168 QIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 227
+ LL+SFG L F LVKD T S+G FC Y DP T IA LNG+++GD+ L V
Sbjct: 346 PVTMLLKSFGELKSFVLVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDRHLKVV 405
Query: 228 RATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVL 281
RA+ I I Q +G++ MS+F +T + +VL
Sbjct: 406 RAS--------------------IGI----TQAAGLDMGVNAMSMFAKTTSQDLETSRVL 441
Query: 282 CLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYY 341
L +T + L D+++Y+EI +D+REEC KYG +V + IPRP ++PGVGK+F+++
Sbjct: 442 QLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGKIFVKFD 501
Query: 342 DAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
A AL+GRKF TV Y+ E+ +
Sbjct: 502 SVESTTNALKALAGRKFSDRTVVTTYFSEENF 533
>gi|242803779|ref|XP_002484243.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
gi|218717588|gb|EED17009.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
Length = 543
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 186/364 (51%), Gaps = 57/364 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++ LPP E A+ +FF+ + G N D V+ I+ + FA +E +
Sbjct: 213 SRQAKRLFAHNLPPNVTEAALVSFFNLQLN--GLNVIEGIDPCVSAQISKDHSFALLEFK 270
Query: 89 TVEEASNAMALDGIIFE-----------GVAVRVRRPTDY-NPTLAAALGPGQPSPNLNL 136
E + A+ALDGI E + +RRP DY P++ P Q S
Sbjct: 271 GANETTVALALDGITMEEHESAATANGGARGLELRRPKDYIVPSVPEDQQPHQES----- 325
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
+ S + + P+++ + +P Y E + LL+S G L F LVKD T S+G
Sbjct: 326 ----VISNHV--PDSPNKLCITNIPLYIPEEPVTMLLKSIGELKAFVLVKDSGTDESRGI 379
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
FC Y D A T IA +LNG+++GDK L + A+
Sbjct: 380 AFCEYVDAASTAIAVESLNGMELGDKHLKITHASIG------------------------ 415
Query: 257 ALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECG 310
A Q +G++ MS+F +T + ++L L +TAD L ++++YEEILED+++EC
Sbjct: 416 ATQAAGLDMGVNAMSMFAKTTSADLETSRILQLLNMVTADELINNDDYEEILEDVQDECS 475
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT-AKNALSGRKFGGNTVNAFYYP 369
KYG +++V IPRP ++ GVGK++++ +D+V AT A AL+GRKF TV Y+P
Sbjct: 476 KYGQVLDVKIPRPAGGSRQSAGVGKIYVK-FDSVESATNALKALAGRKFSDRTVVTTYFP 534
Query: 370 EDKY 373
E+ +
Sbjct: 535 EESF 538
>gi|124360614|gb|ABN08613.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
truncatula]
Length = 257
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/103 (83%), Positives = 93/103 (90%)
Query: 3 QNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG 62
QN P+G +Q+GA LM VQ MTQQATRHARRVYVGGLPP ANEQ+IA+FFSQVM AIGG
Sbjct: 148 QNFSPYGISQIGALSLMQVQPMTQQATRHARRVYVGGLPPFANEQSIASFFSQVMIAIGG 207
Query: 63 NSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE 105
NSAG GD+VVNVYINHEKKFAFVEMRTVEEASNAMALDGI+FE
Sbjct: 208 NSAGSGDSVVNVYINHEKKFAFVEMRTVEEASNAMALDGIVFE 250
>gi|367042858|ref|XP_003651809.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
gi|346999071|gb|AEO65473.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
Length = 563
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 188/360 (52%), Gaps = 47/360 (13%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R+ V LP A E+++ F + + G N D + I ++ FA +E R
Sbjct: 231 SRQSKRLVVENLPASATEESMVNFINLQLN--GLNVIENTDPCLQCLIAPDRSFAMLEFR 288
Query: 89 TVEEASNAMALDGIIFEG-------------VAVRVRRPTDYNPTLAAALGPGQPSPNLN 135
+A+ A+A DGI E +R+RRP DY + A + PN +
Sbjct: 289 NSPDATVALAFDGISMEADDAHAANGNGAAPAGLRIRRPKDY--IVPAVVE----DPNYD 342
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ +S I + P+++ V LP Y T+ Q+ ELL SFG L F LVKD T S+G
Sbjct: 343 PDSDVPSSVVI---DSPNKISVTNLPLYLTDDQVMELLVSFGKLKSFVLVKDNGTQESRG 399
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
F Y DP+VT++A LN + +G++ L V++A+ I I +
Sbjct: 400 IAFLEYVDPSVTNVAIQGLNNMMLGERALKVQKAS--------------------IGITQ 439
Query: 256 MA--LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
+A + + M+ L G S + +++VL L +TAD L D+++YEEI +D+++EC K+G
Sbjct: 440 VAGEMGVNAMSMLAGTTSTDSD-VSRVLQLLNMVTADELMDNDDYEEIRDDVQDECEKFG 498
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
T++++ IPRP G ++ GVGK+F+++ A L+GRKF TV A Y+PE+ +
Sbjct: 499 TVLSLKIPRPTGGGRQSAGVGKIFIKFETPEVATKALRGLAGRKFADRTVVATYFPEENF 558
>gi|281207514|gb|EFA81697.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 682
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 184/368 (50%), Gaps = 31/368 (8%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
VQ + + +RR+YVG +PP E I FF+ + A + PG V+ I K
Sbjct: 287 VQSASAALAKQSRRLYVGNIPPNVTEAQIVEFFNAAIIAAALTTK-PGQPVLLCQITTGK 345
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+ EEA+ M LDGI G ++++RRP DY G +P P G
Sbjct: 346 SFAFIEFRSSEEATLGMGLDGISLSGYSLKIRRPKDYQS------GSNEPMP------TG 393
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
L+ + + +++F+GGLP E QIK +L + G L F+LVKD TG SKG+ FC
Sbjct: 394 LSIVSTNVPDSENKIFLGGLPPTLNEEQIKSMLSAIGRLKAFNLVKDTKTGISKGFAFCE 453
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRAT--------ASSGQSKTEQESILAQAQQHIA 252
+ DP TD ACA LNG K GDK+L V++A+ ++ + + + ++ + +
Sbjct: 454 FLDPENTDKACAELNGTKFGDKSLLVQKASLGKEAIANNNNNNNNNQSLNNPSKVKVDSS 513
Query: 253 IQKMALQTSGMNTLGGGM-----SLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
+ + T+ + + G + S ++V+ L + + DD YE +L D ++
Sbjct: 514 VSSLLNLTTALPQVLGAIRSNVSSDNNSKPSRVVQLLNMTDKEEIQDDNNYENLLLDTKD 573
Query: 308 ECGKYGTLVNVVIPRPDQNGGETP-GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAF 366
C ++G + ++ I RP ++P + KVF+ + A L GRK+ T+
Sbjct: 574 ACEEFGEIESIFISRPK----DSPLDIIKVFVCFSQLESAQKAWVGLGGRKYNYRTIITA 629
Query: 367 YYPEDKYF 374
+YPED Y
Sbjct: 630 FYPEDLYI 637
>gi|83765203|dbj|BAE55346.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 563
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 187/389 (48%), Gaps = 63/389 (16%)
Query: 7 PFGATQLGAFPLMPVQVMTQQAT------RHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
P ++L AF P + A+ R A+R++V LP A + + +FF+ +
Sbjct: 201 PMDPSRLQAFMSQPGAGTAESASLKPSNSRQAKRLFVSNLPASATGENLLSFFNLQLN-- 258
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVA------------ 108
G N D ++ ++ ++ FA +E +T +A+ A+A DGI +
Sbjct: 259 GLNVIHSVDPCISAQVSDDRSFALLEFKTPNDATVALAFDGITMDESEAAGNGAANGAPQ 318
Query: 109 -VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTET 167
+ VRRP DY PS N G+ + + P+++ V +P+Y E
Sbjct: 319 GLEVRRPKDY----------IVPSGNEQEYQEGVLLNEV--PDSPNKICVSNIPHYIPEE 366
Query: 168 QIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 227
+ LL+SFG L F LVKD T S+G FC Y DP T IA LNG+++GD+ L V
Sbjct: 367 PVTMLLKSFGELKSFVLVKDGSTEESRGIAFCEYADPNATSIAVEGLNGMELGDRHLKVV 426
Query: 228 RATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVL 281
RA+ I I Q +G++ MS+F +T + +VL
Sbjct: 427 RAS--------------------IGIT----QAAGLDMGVNAMSMFAKTTSQDLETSRVL 462
Query: 282 CLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYY 341
L +T + L D+++Y+EI +D+REEC KYG +V + IPRP ++PGVGK+F+++
Sbjct: 463 QLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGKIFVKFD 522
Query: 342 DAVGCATAKNALSGRKFGGNTVNAFYYPE 370
A AL+GRKF TV Y+ E
Sbjct: 523 SVESTTNALKALAGRKFSDRTVVTTYFSE 551
>gi|221483471|gb|EEE21790.1| U2 snRNP auxiliary factor, putative [Toxoplasma gondii GT1]
gi|221507941|gb|EEE33528.1| U2 snRNP splicing factor, putative [Toxoplasma gondii VEG]
Length = 553
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 182/366 (49%), Gaps = 27/366 (7%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGG-------NSAGPGDAVVNV----YINH 78
R +R+YVG LPP + + + FF+ + A+ + A G+ ++ V N
Sbjct: 185 RKQKRLYVGNLPPGSTQPDVVGFFNGALLAVNAQTGFVKEDEATAGEQLLPVERCEVFNE 244
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+F F+E+R + A + LDGI + G ++RV RP DY P G P+ +
Sbjct: 245 SSRFCFIELRNEQYAILCVKLDGITYNGYSLRVGRPHDYVPPPG-----GDPAHQAYIPL 299
Query: 139 VGLASGAIGGAE---------GPD-RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDR 188
+ A + GPD ++++ LP E Q+++LLE FGTL +L+++
Sbjct: 300 LDDAKKVKREEKREKPSRPETGPDNKIYIQNLPPEMGEEQVRDLLEQFGTLRVLNLIRNV 359
Query: 189 DTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
TG KGYGF Y+DP VTD A ALNG G L+V+RA S E +A
Sbjct: 360 QTGQHKGYGFFEYEDPEVTDQAILALNGFVCGANMLSVQRANFSGSVVTRETNRTMAVTS 419
Query: 249 QHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREE 308
++ + L + GE +KV+ L + + L D +EYE I +D+++E
Sbjct: 420 LPNSMTQKLLSDPLVAVQVQAARKIGERPSKVVQLLNCVYQEDLIDPKEYEAICDDIKQE 479
Query: 309 CGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN-TVNAFY 367
K+G L V++P+P+++ GVGKVFL Y D A+ L+GR+F N V A +
Sbjct: 480 AEKHGALEEVLVPKPNEDLSYREGVGKVFLRYSDVTAARKAQLMLNGRRFDSNRVVCAAF 539
Query: 368 YPEDKY 373
+PE+K+
Sbjct: 540 FPEEKF 545
>gi|68068227|ref|XP_676023.1| U2 snRNP auxiliary factor [Plasmodium berghei strain ANKA]
gi|56495523|emb|CAI00540.1| U2 snRNP auxiliary factor, putative [Plasmodium berghei]
Length = 630
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 188/380 (49%), Gaps = 35/380 (9%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA---GPGDA----VVNVYI-NH 78
+ + R++Y+G LPP + ++ I FF+ +++I S+ GD VV I N
Sbjct: 255 EGDKKQRKLYIGNLPPNSKQEEIVEFFNNTISSIIKGSSLEVKIGDVQLLPVVKCEIFNA 314
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+ +F F+E RT++ + LD + + +R+ RP DY P P + P L +
Sbjct: 315 DSRFCFLEFRTMDITWLCLKLDSMSYNNYCLRINRPHDYMP-------PPEGDPALTVVF 367
Query: 139 VGLASGAIGGAEGP------------DRVFVGGLPYYFTETQIKELLESFGTLHGFDLVK 186
+ G + + P +++++ LP+ + QI +LL FG L GF+++K
Sbjct: 368 PDIDMGLLESFKPPKIAPVRSTGDDDNKLYIQNLPHDLKDDQIMDLLGQFGKLKGFNIIK 427
Query: 187 DRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
D +TG +KGYGF Y+D + T +A ALNG G L V++AT + + + +
Sbjct: 428 DLNTGLNKGYGFFEYEDSSCTQVAIHALNGFVCGKNILNVKKATFNKNSNNAPNSNNIVL 487
Query: 247 AQQ--------HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEY 298
A +I + L S + GE ++V+ LT A+ + L D +Y
Sbjct: 488 ANNVDVPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVIQLTNAVFQEDLIIDSQY 547
Query: 299 EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKF 358
+EIL+D++EE KYG L ++VIP+P+ + T GVGK+FL Y D A+ +GR F
Sbjct: 548 DEILKDVKEEAEKYGPLQSIVIPKPNTDLSYTEGVGKIFLHYVDETAARKAQYMFNGRLF 607
Query: 359 GGNTVNAFYYPEDKYFNKDY 378
V A +Y E+K+ Y
Sbjct: 608 EKRVVCASFYSEEKFLKGKY 627
>gi|124810295|ref|XP_001348830.1| U2 snRNP auxiliary factor, putative [Plasmodium falciparum 3D7]
gi|23497731|gb|AAN37269.1|AE014827_12 U2 snRNP auxiliary factor, putative [Plasmodium falciparum 3D7]
Length = 833
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 189/390 (48%), Gaps = 53/390 (13%)
Query: 26 QQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA---GPGDA----VVNVYI-N 77
Q + R++Y+G +PP + ++ + FF+ + A+ +S+ GD V+ I N
Sbjct: 449 QDTDKKQRKLYIGNIPPNSKQEDVVDFFNNSILAVIKDSSLDVKIGDVQLMPVIKCEIFN 508
Query: 78 HEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP-----------------T 120
+ +F F+E RTV+ + LD I + +R+ RP DY P
Sbjct: 509 SDSRFCFLEFRTVQITWLCLKLDSIPYNNYCLRIGRPHDYIPPPEGDPAFTTVFTDINMD 568
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
+ L P +P +N+ ++ +R+++ LP+ + QIK+LLE FG L
Sbjct: 569 VFEKLRPSKP---VNVKT---------SSDEENRLYIQNLPHDLKDEQIKDLLEQFGDLK 616
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
F+++KD +TG +KGYGF Y+D + T +A ALNG G L V++AT + +
Sbjct: 617 AFNIIKDLNTGLNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFNKQPTTITT 676
Query: 241 ESILAQAQQHI----------------AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLT 284
+ + + +I + L S + GE +KV+ LT
Sbjct: 677 NNNMNNQNPNFIALPNNSDVPVTLLPSSISQKILSNSIIGLQVQASRKIGEKSSKVVQLT 736
Query: 285 EAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAV 344
A+ + L D +YEEIL++++EE KYGTL N+VIP+P+++ T GVGK+FL Y D
Sbjct: 737 NAVFQEDLIVDSQYEEILKEVKEEAEKYGTLQNIVIPKPNKDLSYTEGVGKIFLHYADEA 796
Query: 345 GCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
A+ +GR F V A +Y E+ +
Sbjct: 797 TARKAQYMFNGRLFEKRVVCAAFYSEEHFL 826
>gi|119482894|ref|XP_001261475.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
gi|119409630|gb|EAW19578.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
Length = 563
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 190/397 (47%), Gaps = 63/397 (15%)
Query: 2 AQNMLPFGATQLGAFPLMP------VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQ 55
A P ++L AF P + +R ARR++V LP + + + + +FF+
Sbjct: 200 APRQQPMDPSRLQAFMNQPGGGSADNSALKPSNSRQARRLFVYNLPSVVSSEHLVSFFNL 259
Query: 56 VMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE---------- 105
+ G N D ++ I+ + FA +E +T + + A+A DGI E
Sbjct: 260 QLN--GLNVIHSVDPCISAQISEDHSFALLEFKTPNDTTVALAFDGITMEEHEPASGTEN 317
Query: 106 --GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYY 163
+ VRRP DY +A Q LN + P+++ V +P Y
Sbjct: 318 GAPKGLEVRRPKDYIVPNGSADQEYQEGVLLNEVP-----------DSPNKICVSNIPQY 366
Query: 164 FTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKT 223
E + LL+SFG L F LVKD T S+G FC Y DP+ T IA LNG+++GD+
Sbjct: 367 IPEEPVTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATAIAVEGLNGMELGDRH 426
Query: 224 LTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA----- 278
L V RA+ Q +G++ MS+F +T +
Sbjct: 427 LKVVRASIG------------------------MTQAAGLDMGVNAMSMFAKTTSQDLES 462
Query: 279 -KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
+VL L +T + L D+++YEEI +D+REEC KYG ++++ +PRP ++PGVGK++
Sbjct: 463 SRVLQLLNMVTPEELLDNDDYEEICDDVREECSKYGKVLDLKVPRPSGGSRQSPGVGKIY 522
Query: 338 LEYYDAVGCAT-AKNALSGRKFGGNTVNAFYYPEDKY 373
++ +D V AT A AL+GRKF TV Y+ E+ +
Sbjct: 523 VK-FDTVESATNALKALAGRKFSDRTVVTTYFSEENF 558
>gi|326475623|gb|EGD99632.1| splicing factor u2af large subunit [Trichophyton tonsurans CBS
112818]
gi|326483752|gb|EGE07762.1| splicing factor U2AF subunit [Trichophyton equinum CBS 127.97]
Length = 565
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 176/370 (47%), Gaps = 58/370 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R++ +PP E + FF+ + G N D +V I+ + KFA +E
Sbjct: 223 SRQSKRLFAHNIPPSVTEDTLQQFFNLQLN--GLNVISGVDPCQSVQISKDGKFALLEFN 280
Query: 89 TVEEASNAMALDGIIFEG---------------VAVRVRRPTDYNPTLAAALGPGQPSPN 133
T +A+ A+A DGI E + + RP DY L P Q
Sbjct: 281 TAADATVALAFDGITMEEHEANRESNGESNGEVKGLTIVRPKDYIVPLPTDEEPRQE--- 337
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
G+ S + + P+++ V +P + E Q+ LL SFG L F LVKD T S
Sbjct: 338 ------GVVSSNV--PDSPNKICVSNIPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDES 389
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
+G FC Y DPA T IA LNG+++GD+ L V RA+ +
Sbjct: 390 RGIAFCEYLDPASTGIAVEGLNGMELGDRRLKVNRASIGT-------------------- 429
Query: 254 QKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMRE 307
+Q +G++ MS+F +T + +VL L +TAD L D+E+YEEI ED++E
Sbjct: 430 ----VQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTADELIDNEDYEEICEDVQE 485
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
EC KYG + + IPRP + GVGK+++++ A AL+GRKF TV Y
Sbjct: 486 ECSKYGVVEELKIPRPSAGSRQAAGVGKIYVKFDTPEAATKALQALAGRKFQDRTVVTTY 545
Query: 368 YPEDKYFNKD 377
+ E Y N +
Sbjct: 546 FSEASYPNSN 555
>gi|82540696|ref|XP_724646.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479360|gb|EAA16211.1| splicing factor-like protein, putative [Plasmodium yoelii yoelii]
Length = 714
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 189/380 (49%), Gaps = 35/380 (9%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA---GPGDA----VVNVYI-NH 78
+ + R++Y+G LPP + ++ I FF+ +++I S+ GD VV I N
Sbjct: 339 EGDKKQRKLYIGNLPPNSKQEEIVEFFNNTISSIIKGSSLEVKIGDVQLLPVVKCEIFNA 398
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+ +F F+E RT++ + LD + + +R+ RP DY P P + P L +
Sbjct: 399 DSRFCFLEFRTMDITWLCLKLDSMSYNNYCLRINRPHDYMP-------PPEGDPALTVVF 451
Query: 139 VGLASGAIGGAEGP------------DRVFVGGLPYYFTETQIKELLESFGTLHGFDLVK 186
+ G + + P +++++ LP+ + QI +LL FG L GF+++K
Sbjct: 452 PDIDMGLLESFKPPKIAPVRSTGDDDNKLYIQNLPHDLKDDQIMDLLGQFGKLKGFNIIK 511
Query: 187 DRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
D +TG +KGYGF Y+D + T +A ALNG G L V++AT + + + +A
Sbjct: 512 DLNTGLNKGYGFFEYEDSSCTQVAIHALNGFVCGKNILNVKKATFNKNSNNAPNSNNIAL 571
Query: 247 AQQ--------HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEY 298
A +I + L S + GE ++V+ LT A+ + L + +Y
Sbjct: 572 ANNVDVPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVIQLTNAVFQEDLIINSQY 631
Query: 299 EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKF 358
+EIL+D++EE KYG L ++VIP+P+ + T GVGK+FL Y D A+ +GR F
Sbjct: 632 DEILKDVKEEAEKYGPLQSIVIPKPNTDLSYTEGVGKIFLHYVDETAARKAQYMFNGRLF 691
Query: 359 GGNTVNAFYYPEDKYFNKDY 378
V A +Y E+K+ Y
Sbjct: 692 EKRVVCASFYSEEKFLEGKY 711
>gi|315044445|ref|XP_003171598.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|311343941|gb|EFR03144.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
Length = 565
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 58/366 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R++ +PP E + FF+ + G N D +V I+ + KFA +E
Sbjct: 232 SRQSKRLFTHNIPPSVTEDTLQQFFNLQLN--GLNVISGVDPCQSVQISKDGKFALLEFN 289
Query: 89 TVEEASNAMALDGIIFEG---------------VAVRVRRPTDYNPTLAAALGPGQPSPN 133
T +A+ A+A DGI E + + RP DY L P Q
Sbjct: 290 TAADATVALAFDGITMEEHEANRENNGESNGEVKGLSIIRPKDYIVPLPTDEEPHQE--- 346
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
G+ S + + P+++ V +P + E Q+ LL SFG L F LVKD T S
Sbjct: 347 ------GVVSSNV--PDSPNKICVSNIPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDES 398
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
+G FC Y DPA T IA LNG+++GD+ L V RA+ +
Sbjct: 399 RGIAFCEYLDPASTGIAVEGLNGMELGDRRLKVNRASIGT-------------------- 438
Query: 254 QKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMRE 307
+Q +G++ MS+F +T + +VL L +TAD L D+E+YEEI ED++E
Sbjct: 439 ----VQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTADELIDNEDYEEICEDVQE 494
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
EC KYG + + IPRP + GVGK+++++ A AL+GRKF TV Y
Sbjct: 495 ECSKYGVVEELKIPRPSAGSRQAAGVGKIYIKFDTPESATKALQALAGRKFQDRTVVTTY 554
Query: 368 YPEDKY 373
+ E+ +
Sbjct: 555 FSEENF 560
>gi|110741990|dbj|BAE98934.1| splicing factor like protein [Arabidopsis thaliana]
Length = 341
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/112 (75%), Positives = 94/112 (83%), Gaps = 1/112 (0%)
Query: 1 MAQNMLPFGATQ-LGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA 59
M NM P Q G +MP+Q MTQQATRHARRVYVGGL P ANEQ++ATFFSQVM A
Sbjct: 206 MFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAA 265
Query: 60 IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRV 111
+GGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAM+LDGIIFEG V+V
Sbjct: 266 VGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKV 317
>gi|237839189|ref|XP_002368892.1| U2 snRNP auxiliary factor or splicing factor, putative [Toxoplasma
gondii ME49]
gi|211966556|gb|EEB01752.1| U2 snRNP auxiliary factor or splicing factor, putative [Toxoplasma
gondii ME49]
Length = 553
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 178/361 (49%), Gaps = 17/361 (4%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGG-------NSAGPGDAVVNV----YINH 78
R +R+YVG LPP + + + FF+ + A+ + A G+ ++ V N
Sbjct: 185 RKQKRLYVGNLPPGSTQPDVVGFFNGALLAVNAQTGFVKEDEATAGEQLLPVERCEVFNE 244
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+F F+E+R + A + LDGI + G ++RV RP DY P P L+ A
Sbjct: 245 SSRFCFIELRNEQYAILCVKLDGITYNGYSLRVGRPHDYVPPPGGDPAHQAYIPLLDDAK 304
Query: 139 VGLASGAIGGAEGPD-----RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
P+ ++++ LP E Q+++LLE FGTL +L+++ TG
Sbjct: 305 KVKREEKREKPSRPETGPNNKIYIQNLPPEMGEEQVRDLLEQFGTLRVLNLIRNVQTGQH 364
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
KGYGF Y+DP VTD A ALNG G L+V+RA S E +A ++
Sbjct: 365 KGYGFFEYEDPEVTDQAILALNGFVCGANMLSVQRANFSGSVVTRETNRTMAVTSLPNSM 424
Query: 254 QKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
+ L + GE +KV+ L + + L D +EYE I +D+++E K+G
Sbjct: 425 TQKLLSDPLVAVQVQAARKIGERPSKVVQLLNCVYQEDLIDPKEYEAICDDIKQEAEKHG 484
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN-TVNAFYYPEDK 372
L V++P+P+++ GVGKVFL Y D A+ L+GR+F N V A ++PE+K
Sbjct: 485 ALEEVLVPKPNEDLSYREGVGKVFLRYSDVTAARKAQLMLNGRRFDSNRVVCAAFFPEEK 544
Query: 373 Y 373
+
Sbjct: 545 F 545
>gi|159123253|gb|EDP48373.1| splicing factor u2af large subunit [Aspergillus fumigatus A1163]
Length = 567
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 181/364 (49%), Gaps = 57/364 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ARR++V LPP + + + + F+ + G N D ++ I+ + FA +E +
Sbjct: 237 SRQARRLFVYNLPPGVSSEHLVSLFNLQLN--GLNVIHHVDPCISAQISEDHSFALLEFK 294
Query: 89 TVEEASNAMALDGIIFE------------GVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
T +A+ A+A DGI E + VRRP DY +A Q LN
Sbjct: 295 TPNDATVALAFDGITMEEHEPVSGAENGAPKGLEVRRPKDYIVPNGSADQEYQEGVLLNE 354
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
+ P+++ V +P Y E + LL+SFG L F LVKD T S+G
Sbjct: 355 VP-----------DSPNKICVSNIPQYIPEEPVTMLLKSFGELKSFVLVKDSSTEESRGI 403
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
FC Y DP+ T IA LNG+++GD+ L V RA+
Sbjct: 404 AFCEYADPSATAIAVEGLNGMELGDRHLKVVRASIG------------------------ 439
Query: 257 ALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECG 310
Q +G++ MS+F +T + +VL L +T + L D+++YEEI +D+REEC
Sbjct: 440 MTQAAGLDMGVNAMSMFAKTTSQDLESSRVLQLLNMVTPEELLDNDDYEEICDDVREECF 499
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT-AKNALSGRKFGGNTVNAFYYP 369
KYG ++++ +PRP ++PGVGK++++ +D V AT A AL+GRKF TV Y+
Sbjct: 500 KYGKVLDLKVPRPSGGSRQSPGVGKIYVK-FDTVEAATNALKALAGRKFSDRTVVTTYFS 558
Query: 370 EDKY 373
E+ +
Sbjct: 559 EENF 562
>gi|146324846|ref|XP_748978.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
gi|129556630|gb|EAL86940.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
Length = 563
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 181/364 (49%), Gaps = 57/364 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ARR++V LPP + + + + F+ + G N D ++ I+ + FA +E +
Sbjct: 233 SRQARRLFVYNLPPGVSSEHLVSLFNLQLN--GLNVIHHVDPCISAQISEDHSFALLEFK 290
Query: 89 TVEEASNAMALDGIIFE------------GVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
T +A+ A+A DGI E + VRRP DY +A Q LN
Sbjct: 291 TPNDATVALAFDGITMEEHEPVSGAENGAPKGLEVRRPKDYIVPNGSADQEYQEGVLLNE 350
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
+ P+++ V +P Y E + LL+SFG L F LVKD T S+G
Sbjct: 351 VP-----------DSPNKICVSNIPQYIPEEPVTMLLKSFGELKSFVLVKDSSTEESRGI 399
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
FC Y DP+ T IA LNG+++GD+ L V RA+
Sbjct: 400 AFCEYADPSATAIAVEGLNGMELGDRHLKVVRASIG------------------------ 435
Query: 257 ALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECG 310
Q +G++ MS+F +T + +VL L +T + L D+++YEEI +D+REEC
Sbjct: 436 MTQAAGLDMGVNAMSMFAKTTSQDLESSRVLQLLNMVTPEELLDNDDYEEICDDVREECF 495
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT-AKNALSGRKFGGNTVNAFYYP 369
KYG ++++ +PRP ++PGVGK++++ +D V AT A AL+GRKF TV Y+
Sbjct: 496 KYGKVLDLKVPRPSGGSRQSPGVGKIYVK-FDTVEAATNALKALAGRKFSDRTVVTTYFS 554
Query: 370 EDKY 373
E+ +
Sbjct: 555 EENF 558
>gi|302511201|ref|XP_003017552.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
gi|291181123|gb|EFE36907.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
Length = 501
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 176/370 (47%), Gaps = 58/370 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R++ +PP E + FF+ + G N D +V I+ + KFA +E
Sbjct: 161 SRQSKRLFAHNIPPNVTEDTLQQFFNLQLN--GLNVISGVDPCQSVQISKDGKFALLEFN 218
Query: 89 TVEEASNAMALDGIIFEG---------------VAVRVRRPTDYNPTLAAALGPGQPSPN 133
T +A+ A+A DGI E + + RP DY + P Q
Sbjct: 219 TAADATVALAFDGITMEEHEANRESNGESNGEVKGLTIVRPKDYIVPIPTDEEPRQE--- 275
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
G+ S + + P+++ V +P + E Q+ LL SFG L F LVKD T S
Sbjct: 276 ------GVVSSNV--PDSPNKICVSNIPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDES 327
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
+G FC Y DPA T IA LNG+++GD+ L V RA+ +
Sbjct: 328 RGIAFCEYLDPASTGIAVEGLNGMELGDRRLKVNRASIGT-------------------- 367
Query: 254 QKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMRE 307
+Q +G++ MS+F +T + +VL L +TAD L D+E+YEEI ED++E
Sbjct: 368 ----VQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTADELIDNEDYEEICEDVQE 423
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
EC KYG + + IPRP + GVGK+++++ A AL+GRKF TV Y
Sbjct: 424 ECSKYGVVEELKIPRPSAGSRQAAGVGKIYVKFDSPESATKALQALAGRKFQDRTVVTTY 483
Query: 368 YPEDKYFNKD 377
+ E + N +
Sbjct: 484 FSEASHPNSN 493
>gi|212539736|ref|XP_002150023.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067322|gb|EEA21414.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 551
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 191/387 (49%), Gaps = 61/387 (15%)
Query: 11 TQLGAFPLMPVQVMTQQAT------RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNS 64
++L A P T+ +T R A+R++ LPP + A+ +FF+ + G N
Sbjct: 197 SRLQALVNQPSATTTESSTLRPANSRQAKRLFAYNLPPNVTDAALISFFNLQLN--GLNV 254
Query: 65 AGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE-----------GVAVRVRR 113
D V+ I+ + FA +E + EA+ A+ALDGI E + +RR
Sbjct: 255 IEGIDPCVSSQISKDHAFALLEFKGPNEATVALALDGISMEEHEAAATTNGGARGLELRR 314
Query: 114 PTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELL 173
P DY + P P + G+ S + + P+++ V +P Y E + LL
Sbjct: 315 PKDY-------IVPSSPE-DQQPYQEGVISNQV--PDSPNKLCVTNIPLYIPEEPVTMLL 364
Query: 174 ESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASS 233
+S G L F LVKD T S+G FC Y D T IA +LNG+++GDK L + A+
Sbjct: 365 KSIGELRAFVLVKDSGTDESRGIAFCEYVDATATAIAVESLNGMELGDKHLKITHASIG- 423
Query: 234 GQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAI 287
Q +G++ MS+F +T + +VL L +
Sbjct: 424 -----------------------VTQAAGLDMGVNAMSMFAKTTSADLETTRVLQLLNMV 460
Query: 288 TADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCA 347
TAD L ++E+YEEILED+++EC KYG ++++ IPRP ++ GVGK+F++ +D V A
Sbjct: 461 TADELINNEDYEEILEDVQDECSKYGQVLDLKIPRPAGGSRQSAGVGKIFVK-FDTVESA 519
Query: 348 T-AKNALSGRKFGGNTVNAFYYPEDKY 373
T A AL+GRKF TV Y+PE+ +
Sbjct: 520 TNALKALAGRKFSDRTVVTTYFPEESF 546
>gi|171684585|ref|XP_001907234.1| hypothetical protein [Podospora anserina S mat+]
gi|170942253|emb|CAP67905.1| unnamed protein product [Podospora anserina S mat+]
Length = 585
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 192/382 (50%), Gaps = 51/382 (13%)
Query: 11 TQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
T+L AF P + A +R A+R+ + +P A + +I FF+ + G N
Sbjct: 231 TKLQAFMSQPGGAVNSAALKPTNSRQAKRLILSNIPASATDDSIVNFFNLQLN--GLNVI 288
Query: 66 GPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG------------VAVRVRR 113
D + I+ ++ FA +E R +A+ A+ALDGI + +++RR
Sbjct: 289 EQTDPCLLCNISPDRSFAMLEFRNNTDATVALALDGITMDADDHQANGNGAAATGLKIRR 348
Query: 114 PTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELL 173
P DY + A + P+ ++ + + +GP+++ V +P Y TE Q+ ELL
Sbjct: 349 PKDY--IVPAIVEDPNYDPDSSVPSTNVV-------DGPNKISVTNIPPYLTEDQVMELL 399
Query: 174 ESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASS 233
SFG L F VKD T +G F Y D +VTD+A + LN + +G+K L V++A+
Sbjct: 400 VSFGKLKSFVFVKDNGTQEPRGIAFLEYADSSVTDVAISGLNNMMLGEKALKVQKAS--- 456
Query: 234 GQSKTEQESILAQAQQHIAIQKMA--LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADA 291
I I ++A L + M+ L G + +VL L +TAD
Sbjct: 457 -----------------IGITQVAGELSVNAMSMLAGTTPSDNDA-GRVLQLLNMVTADE 498
Query: 292 LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKN 351
L D+++YEEI +D++EEC K+G ++++ IPRP ++ GVGK+F+++ + A
Sbjct: 499 LMDNDDYEEIRDDVQEECEKFGKILSLKIPRPVGGSRQSAGVGKIFIKFENHEAANKALR 558
Query: 352 ALSGRKFGGNTVNAFYYPEDKY 373
AL+GRKF TV Y+PE+ +
Sbjct: 559 ALAGRKFADRTVVTTYFPEENF 580
>gi|221484193|gb|EEE22489.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
GT1]
Length = 820
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 134/223 (60%), Gaps = 23/223 (10%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+RHAR+VYVG LP + + +F++++T + PGD +V+VY+N ++FAF+E R
Sbjct: 279 SRHARKVYVGNLPVPVTQAEVQQYFNELLTTLLPKKV-PGDTIVHVYVNPSRRFAFLEHR 337
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA--------AALG---------PGQPS 131
++EEA+ + LDG+ + A+ +RRP DYNPTLA A LG P Q +
Sbjct: 338 SIEEANFTLGLDGVSWRNCALSLRRPQDYNPTLAEQQYREERARLGSMTGFAVPPPSQAA 397
Query: 132 PNLNLAAVGLASGAIG-----GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVK 186
+ A L +GA+G + P ++F+GGLP+ TE K+LLE+FG L +VK
Sbjct: 398 TPASPAESSLIAGALGIVSTTVPDSPHKIFIGGLPHSITEQGCKQLLEAFGQLRALHVVK 457
Query: 187 DRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRA 229
D+ G+ KG+ FC Y DP VTD+A A LN +++ D+ L VRRA
Sbjct: 458 DQQRGDCKGFAFCEYLDPNVTDVAVAGLNNMRIADRVLQVRRA 500
>gi|119189253|ref|XP_001245233.1| hypothetical protein CIMG_04674 [Coccidioides immitis RS]
gi|392868136|gb|EAS33879.2| U2 snRNP auxilliary factor, large subunit, splicing factor
[Coccidioides immitis RS]
Length = 545
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 185/362 (51%), Gaps = 54/362 (14%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++V L P +E +IA FF+ + G N D V+ ++ + FA +E +
Sbjct: 216 SRQAKRLFVYNLSPSLSEDSIAQFFNLQLN--GLNVVSGVDPCVSAQLSTDGTFALLEFK 273
Query: 89 TVEEASNAMALDGIIFE-----------GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA 137
T +A+ A+A DG+ E + +RRP DY + P + + + N
Sbjct: 274 TAADATVALAFDGVSMEPDDANGHTNGSSQGLSIRRPKDY-------IVPSE-TDDSNRQ 325
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
G+ S + + P+++ V +P + E Q+ LL SFG L F LVKD T S+G
Sbjct: 326 E-GVVSNEV--PDSPNKICVTNIPPFIQEEQVTMLLVSFGELKSFVLVKDSGTDESRGIA 382
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA 257
FC Y DP+ T+IA LNG+++GDK L V RA+ A
Sbjct: 383 FCEYVDPSSTNIAVEGLNGMELGDKRLKVTRASIG------------------------A 418
Query: 258 LQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECGK 311
Q +G++ MS+F +T + +VL L +TA+ L D+++YEEI +D+R+EC K
Sbjct: 419 TQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTAEELMDNDDYEEICDDVRDECSK 478
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPED 371
YG ++ + +PRP ++ GVGK+++++ + A AL+GRKF TV ++ E+
Sbjct: 479 YGQILEMKVPRPTGGSRQSAGVGKIYVKFDNYESAYKAMKALAGRKFQDRTVVTTFFSEE 538
Query: 372 KY 373
+
Sbjct: 539 NF 540
>gi|237838479|ref|XP_002368537.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211966201|gb|EEB01397.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|221505828|gb|EEE31473.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
VEG]
Length = 816
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 134/223 (60%), Gaps = 23/223 (10%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+RHAR+VYVG LP + + +F++++T + PGD +V+VY+N ++FAF+E R
Sbjct: 275 SRHARKVYVGNLPVPVTQAEVQQYFNELLTTLLPKKV-PGDTIVHVYVNPSRRFAFLEHR 333
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA--------AALG---------PGQPS 131
++EEA+ + LDG+ + A+ +RRP DYNPTLA A LG P Q +
Sbjct: 334 SIEEANFTLGLDGVSWRNCALSLRRPQDYNPTLAEQQYREERARLGSMTGFAVPPPSQAA 393
Query: 132 PNLNLAAVGLASGAIG-----GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVK 186
+ A L +GA+G + P ++F+GGLP+ TE K+LLE+FG L +VK
Sbjct: 394 TPASPAESSLIAGALGIVSTTVPDSPHKIFIGGLPHSITEQGCKQLLEAFGQLRALHVVK 453
Query: 187 DRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRA 229
D+ G+ KG+ FC Y DP VTD+A A LN +++ D+ L VRRA
Sbjct: 454 DQQRGDCKGFAFCEYLDPNVTDVAVAGLNNMRIADRVLQVRRA 496
>gi|403331270|gb|EJY64574.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 565
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 192/390 (49%), Gaps = 59/390 (15%)
Query: 31 HARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTV 90
H+RR+YVGG+P ++ + F +Q + GG GD V+ N EK++ F+E+R+V
Sbjct: 188 HSRRLYVGGVPTSQSDVQVVQFLTQTLRKAGG-ILEEGDPVIKSQNNPEKRYTFLELRSV 246
Query: 91 EEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAE 150
EEAS + LDGI F +R+RRP DY+ P + AA+G+ S + E
Sbjct: 247 EEASTMIQLDGIKFMDSTLRIRRPEDYDKYPQIPPRRPIPQIDT--AALGIISTKV--EE 302
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
P ++FVGGLP F E QIK LL +G L F LVK + S+G+ FC Y D A
Sbjct: 303 TPLKIFVGGLPKEFNEEQIKNLLLRYGQLKSFHLVKHTNIDQSRGFAFCEYTDEKGVQNA 362
Query: 211 CAALNGLKMGDKTLTVRRATASSG---QSKTEQE-------------------------- 241
LNGLK+G +++ VRR AS+ Q++ +E
Sbjct: 363 IQFLNGLKIGSRSINVRRTGASTSTVQQNQISEEDKKKFEDKLDDFINETGKFMQNANMY 422
Query: 242 SILAQA-QQHIAI-------QKMA---LQTSGMNTLGGGMSLFGETLAKVLCLTEAITAD 290
+I Q+ QQH Q+MA Q+ G T+ M + K+ L++ I
Sbjct: 423 NIDKQSVQQHNPFDELERHNQQMASYIQQSYGYTTISTVMEI------KIPALSQQI--- 473
Query: 291 ALADDEEYEEILEDMREECGKYGTLVNVVIPRP---DQNGGETPG-VGKVFLEYYDAVGC 346
L +D+E++E+++D+ +E K+G + +++PR Q P +GK F+E+ +
Sbjct: 474 -LDNDQEHDELVKDLTQELQKFGKIRTLLLPRSLDMMQTSTVKPSAIGKAFVEFEEVTSG 532
Query: 347 ATAKNALSGRKFGGNTVNAFYYPEDKYFNK 376
N L+GR+F G V +Y +D + K
Sbjct: 533 FACYNLLNGRQFMGMPVEINFYNKDLFVTK 562
>gi|320031290|gb|EFW13263.1| splicing factor u2af large subunit [Coccidioides posadasii str.
Silveira]
Length = 545
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 185/362 (51%), Gaps = 54/362 (14%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++V L P +E +IA FF+ + G N D V+ ++ + FA +E +
Sbjct: 216 SRQAKRLFVYNLSPSLSEDSIAQFFNLQLN--GLNVVSGVDPCVSAQLSTDGTFALLEFK 273
Query: 89 TVEEASNAMALDGIIFE-----------GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA 137
T +A+ A+A DG+ E + +RRP DY + P + + + N
Sbjct: 274 TAADATVALAFDGVSMEPDDANGHTNGSSQGLSIRRPKDY-------IVPSE-TDDSNRQ 325
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
G+ S + + P+++ V +P + E Q+ LL SFG L F LVKD T S+G
Sbjct: 326 E-GVVSNEV--PDSPNKICVTNIPPFIQEEQVTMLLVSFGELKSFILVKDSGTDESRGIA 382
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA 257
FC Y DP+ T+IA LNG+++GDK L V RA+ A
Sbjct: 383 FCEYVDPSSTNIAVEGLNGMELGDKRLKVTRASIG------------------------A 418
Query: 258 LQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECGK 311
Q +G++ MS+F +T + +VL L +TA+ L D+++YEEI +D+R+EC K
Sbjct: 419 TQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTAEELMDNDDYEEICDDVRDECSK 478
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPED 371
YG ++ + +PRP ++ GVGK+++++ + A AL+GRKF TV ++ E+
Sbjct: 479 YGQVLEMKVPRPTGGSRQSAGVGKIYVKFDNYESAYKAMKALAGRKFQDRTVVTTFFSEE 538
Query: 372 KY 373
+
Sbjct: 539 NF 540
>gi|302656965|ref|XP_003020217.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
gi|291184026|gb|EFE39599.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
Length = 486
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 173/363 (47%), Gaps = 58/363 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R++ +PP E + FF+ + G N D +V I+ + KFA +E
Sbjct: 161 SRQSKRLFAHNIPPNVTEDTLQQFFNLQLN--GLNVISGVDPCQSVQISKDGKFALLEFN 218
Query: 89 TVEEASNAMALDGIIFEG---------------VAVRVRRPTDYNPTLAAALGPGQPSPN 133
T +A+ A+A DGI E + + RP DY + P Q
Sbjct: 219 TAADATVALAFDGITMEEHEANRESNGESNGDVKGLTIVRPKDYIVPIPTDEEPRQE--- 275
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
G+ S + + P+++ V +P + E Q+ LL SFG L F LVKD T S
Sbjct: 276 ------GVVSSNV--PDSPNKICVSNIPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDES 327
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
+G FC Y DPA T IA LNG+++GD+ L V RA+ +
Sbjct: 328 RGIAFCEYLDPASTGIAVEGLNGMELGDRRLKVNRASIGT-------------------- 367
Query: 254 QKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMRE 307
+Q +G++ MS+F +T + +VL L +TAD L D+E+YEEI ED++E
Sbjct: 368 ----VQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTADELIDNEDYEEICEDVQE 423
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
EC KYG + + IPRP + GVGK+++++ A AL+GRKF TV Y
Sbjct: 424 ECSKYGVVEELKIPRPSAGSRQAAGVGKIYVKFDSPESATKALQALAGRKFQDRTVVTTY 483
Query: 368 YPE 370
+ E
Sbjct: 484 FSE 486
>gi|296811258|ref|XP_002845967.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843355|gb|EEQ33017.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 557
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 176/366 (48%), Gaps = 58/366 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R++ +PP E + FF+ + G N D +V I+ + KFA +E
Sbjct: 224 SRQSKRLFAHNIPPSVTEDTLQQFFNLQLN--GLNVISGVDPCQSVQISKDGKFALLEFN 281
Query: 89 TVEEASNAMALDGIIFEG---------------VAVRVRRPTDYNPTLAAALGPGQPSPN 133
T +A+ A+A DGI E + + RP DY L P Q
Sbjct: 282 TAADATVALAFDGITMEEHEANQESNGESNGQVKGLSIVRPKDYIVPLPTEEEPRQE--- 338
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
G+ S + + P+++ V +P + E Q+ LL SFG L F LVKD T S
Sbjct: 339 ------GVLSSNV--PDSPNKICVSNIPPFIQEDQVTMLLISFGELKSFVLVKDVGTDES 390
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
+G FC Y DPA T IA LNG+++GD+ L V RA+ +
Sbjct: 391 RGIAFCEYLDPASTGIAVEGLNGMELGDRRLKVNRASIGT-------------------- 430
Query: 254 QKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMRE 307
+Q +G++ MS+F +T + +VL L +TAD L D+++YEEI ED+++
Sbjct: 431 ----VQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTADELIDNDDYEEICEDVQD 486
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
EC KYG + + IPRP + GVGK+++++ A A AL+GRKF TV Y
Sbjct: 487 ECSKYGVVEELKIPRPSGGSRQAAGVGKIYVKFDTAESATKALQALAGRKFQDRTVVTTY 546
Query: 368 YPEDKY 373
+ E+ +
Sbjct: 547 FSEENF 552
>gi|121711505|ref|XP_001273368.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
gi|119401519|gb|EAW11942.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
Length = 583
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 178/362 (49%), Gaps = 58/362 (16%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++V LPP + + + +FF+ + G N D ++ I+ + FA +E +
Sbjct: 234 SRQAKRLFVYNLPPGVSNEHLVSFFNLQLN--GLNVIHNVDPCISAQISEDHTFALLEFK 291
Query: 89 TVEEASNAMALDGIIFE-------------GVAVRVRRPTDYNPTLAAALGPGQPSPNLN 135
+ + + A+A DGI E + VRRP DY +A Q LN
Sbjct: 292 SPNDTTVALAFDGITMEEHEAMGAGAENGASKGLEVRRPKDYVVPNGSADQEYQEGVLLN 351
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ P+++ V +P Y E + LL+SFG L F LVKD T S+G
Sbjct: 352 EVP-----------DSPNKICVSNIPQYIPEEPVTMLLKSFGELKSFVLVKDSSTEESRG 400
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
FC Y DP+ T IA LNG+++GD+ L V RA+
Sbjct: 401 IAFCEYADPSATPIAVEGLNGMELGDRHLKVVRASIG----------------------- 437
Query: 256 MALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREEC 309
Q G++ MS+F +T + +VL L +T + L D+++YEEI +D+REEC
Sbjct: 438 -MTQAVGLDMGVNAMSMFAKTTSQDLESGRVLQLLNMVTPEELMDNDDYEEICDDVREEC 496
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT-AKNALSGRKFGGNTVNAFYY 368
KYG ++++ +PRP ++PGVGK+F++ +D V AT A AL+GRKF TV Y+
Sbjct: 497 SKYGKVLDLKVPRPSGGSRQSPGVGKIFVK-FDTVESATNALKALAGRKFSDRTVVTTYF 555
Query: 369 PE 370
E
Sbjct: 556 AE 557
>gi|212539738|ref|XP_002150024.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067323|gb|EEA21415.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 556
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 191/389 (49%), Gaps = 61/389 (15%)
Query: 11 TQLGAFPLMPVQVMTQQAT------RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNS 64
++L A P T+ +T R A+R++ LPP + A+ +FF+ + G N
Sbjct: 197 SRLQALVNQPSATTTESSTLRPANSRQAKRLFAYNLPPNVTDAALISFFNLQLN--GLNV 254
Query: 65 AGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE-----------GVAVRVRR 113
D V+ I+ + FA +E + EA+ A+ALDGI E + +RR
Sbjct: 255 IEGIDPCVSSQISKDHAFALLEFKGPNEATVALALDGISMEEHEAAATTNGGARGLELRR 314
Query: 114 PTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELL 173
P DY + P P + G+ S + + P+++ V +P Y E + LL
Sbjct: 315 PKDY-------IVPSSPE-DQQPYQEGVISNQV--PDSPNKLCVTNIPLYIPEEPVTMLL 364
Query: 174 ESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASS 233
+S G L F LVKD T S+G FC Y D T IA +LNG+++GDK L + A+
Sbjct: 365 KSIGELRAFVLVKDSGTDESRGIAFCEYVDATATAIAVESLNGMELGDKHLKITHASIG- 423
Query: 234 GQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAI 287
Q +G++ MS+F +T + +VL L +
Sbjct: 424 -----------------------VTQAAGLDMGVNAMSMFAKTTSADLETTRVLQLLNMV 460
Query: 288 TADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCA 347
TAD L ++E+YEEILED+++EC KYG ++++ IPRP ++ GVGK+F++ +D V A
Sbjct: 461 TADELINNEDYEEILEDVQDECSKYGQVLDLKIPRPAGGSRQSAGVGKIFVK-FDTVESA 519
Query: 348 T-AKNALSGRKFGGNTVNAFYYPEDKYFN 375
T A AL+GRKF TV Y+PE + +
Sbjct: 520 TNALKALAGRKFSDRTVVTTYFPEVSFLS 548
>gi|358369529|dbj|GAA86143.1| splicing factor u2af large subunit [Aspergillus kawachii IFO 4308]
Length = 571
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 184/399 (46%), Gaps = 67/399 (16%)
Query: 2 AQNMLPFGATQLGAFPLMP------VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQ 55
A P ++L AF P + +R A+R++V +P + + FF+
Sbjct: 208 APRQQPMDPSRLQAFMNQPAGGNADTSTLKPSNSRQAKRLFVYNIPQTVTGETLLAFFNV 267
Query: 56 VMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE---------- 105
+ G N D ++ + + FA +E ++ +A+ A+A DGI E
Sbjct: 268 QLN--GLNVIESVDPCISAQVAQDHSFALLEFKSPNDATVALAFDGIAMEEHEAAGNGAA 325
Query: 106 ---GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG--AEGPDRVFVGGL 160
+ VRRP DY + PG A G + + P+++ V +
Sbjct: 326 NGAAQGLEVRRPKDY-------IVPGG-------AEQEYQEGVLLNEVPDSPNKICVSNI 371
Query: 161 PYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMG 220
P+Y E + LL+SFG L F LVKD T S+G FC Y DP+ T IA LNG+++G
Sbjct: 372 PHYIPEEPVTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELG 431
Query: 221 DKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA-- 278
D+ L V RA+ Q +G++ MS+F +T +
Sbjct: 432 DRHLKVVRASIG------------------------MTQAAGLDMGVNAMSMFAKTTSQD 467
Query: 279 ----KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
+VL L +T + L D E+YEEI +D+R+EC KYGT+V + +PRP ++PGVG
Sbjct: 468 LETSRVLQLLNMVTPEELMDPEDYEEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVG 527
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
K+F+++ A AL+GRKF TV Y+ E+ +
Sbjct: 528 KIFVKFDTVESTTNALKALAGRKFSDRTVVTTYFSEENF 566
>gi|449299113|gb|EMC95127.1| hypothetical protein BAUCODRAFT_526859 [Baudoinia compniacensis
UAMH 10762]
Length = 432
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 197/391 (50%), Gaps = 57/391 (14%)
Query: 7 PFGATQLGAFPLMP-----VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
P ++L AF P + R ++R++ +PP NE I+ FF+ + G
Sbjct: 73 PMDPSRLQAFMNQPGNQANTSALKPSTARQSKRLFAYNIPPNVNESMISDFFNLQLN--G 130
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGI-------IFEGVA------ 108
N D ++ ++ + +A ++ +T E+A+NAMALDGI + G A
Sbjct: 131 LNVTRGVDPCISAQLSQDLTYALLDFKTSEDATNAMALDGITMPEHMEVMNGSANGNSQG 190
Query: 109 VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPD---RVFVGGLPYYFT 165
+ ++RP DY + A + + G+ S + PD ++ + +P Y T
Sbjct: 191 LIIQRPKDY--IVPAVVDDTE-------HEAGVLSSTV-----PDTQFKISITHIPSYLT 236
Query: 166 ETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA-VTDIACAALNGLKMGDKTL 224
E Q++ELL SFG L F LVKD T S+G FC Y+D TDIA +LNG+++GD L
Sbjct: 237 EEQVQELLVSFGELKNFVLVKDAGTDQSRGIAFCEYKDAKNTTDIAVESLNGMELGDSHL 296
Query: 225 TVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLT 284
V+RA+ + Q E + + M++ M + GG ++VLCL
Sbjct: 297 KVQRASIGTQQVGGE-----------MTVNAMSM----MASAAGGAD---RDASRVLCLM 338
Query: 285 EAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAV 344
IT + L D +E +EILED++EEC KYG +++V +PRP ++ G+GK++++Y
Sbjct: 339 NMITPEELMDADEADEILEDVKEECAKYGAIIDVKMPRPSSGSRQSNGIGKIYVKYEKPE 398
Query: 345 GCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
A AL+GRKF TV ++ E+ YF+
Sbjct: 399 AAQKALAALAGRKFADRTVVVTFFGEE-YFD 428
>gi|303323229|ref|XP_003071606.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240111308|gb|EER29461.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 545
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 184/362 (50%), Gaps = 54/362 (14%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++V L P +E +IA FF+ + G N D V+ ++ + FA +E +
Sbjct: 216 SRQAKRLFVYNLSPSLSEDSIAQFFNLQLN--GLNVVSGVDPCVSAQLSTDGTFALLEFK 273
Query: 89 TVEEASNAMALDGIIFE-----------GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA 137
T +A+ A+A DG+ E + +RRP DY + P + + + N
Sbjct: 274 TAADATVALAFDGVSMEPDDANGHTNGSSQGLSIRRPKDY-------IVPSE-TDDSNRQ 325
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
G+ S + + P ++ V +P + E Q+ LL SFG L F LVKD T S+G
Sbjct: 326 E-GVVSNEV--PDSPSKICVTNIPPFIQEEQVTMLLVSFGELKSFILVKDSGTDESRGIA 382
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA 257
FC Y DP+ T+IA LNG+++GDK L V RA+ A
Sbjct: 383 FCEYVDPSSTNIAVEGLNGMELGDKRLKVTRASIG------------------------A 418
Query: 258 LQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECGK 311
Q +G++ MS+F +T + +VL L +TA+ L D+++YEEI +D+R+EC K
Sbjct: 419 TQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTAEELMDNDDYEEICDDVRDECSK 478
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPED 371
YG ++ + +PRP ++ GVGK+++++ + A AL+GRKF TV ++ E+
Sbjct: 479 YGQVLEMKVPRPTGGSRQSAGVGKIYVKFDNYESAYKAMKALAGRKFQDRTVVTTFFSEE 538
Query: 372 KY 373
+
Sbjct: 539 NF 540
>gi|95103124|gb|ABF51503.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 2
[Bombyx mori]
Length = 306
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 135/220 (61%), Gaps = 10/220 (4%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ FF+Q M + G + G+ V+ I
Sbjct: 83 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMH-LSGLAQAAGNPVLACQI 141
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY P PG +P +N+
Sbjct: 142 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM------PGTENPAINV 195
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
A G+ S + + P ++F+GGLP Y E Q+KELL SFG L F+LVKD TG SKGY
Sbjct: 196 PA-GVISTVV--PDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSSTGLSKGY 252
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQS 236
F Y D ++TD A A LNG+++GDK L V+RA+ + S
Sbjct: 253 AFAEYVDISMTDQAIAGLNGMQLGDKKLIVQRASIGAKNS 292
>gi|164657478|ref|XP_001729865.1| hypothetical protein MGL_2851 [Malassezia globosa CBS 7966]
gi|159103759|gb|EDP42651.1| hypothetical protein MGL_2851 [Malassezia globosa CBS 7966]
Length = 473
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 178/353 (50%), Gaps = 60/353 (16%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEE 92
RR++V + + Q + F + M S+G + V ++ ++ +A++E R +E
Sbjct: 155 RRLHVSPVSSVKTSQQLRIFINAKMNERLLCSSGSLEPCYAVDMHLDEGYAYLEFRNPDE 214
Query: 93 ASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA--E 150
ASNA+ LDG+ F G + + RP Y A P+P GAI + +
Sbjct: 215 ASNALLLDGVAFLGHRLHIERPKGYVGQDAV------PAP-----------GAIETSVPD 257
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
GP+++++G +P + E Q+ ELL++FG + FDL++D +T S+G FC + + AVTD+A
Sbjct: 258 GPNKLYIGNVPVFLNEQQVMELLKAFGDVRHFDLIRDPETQRSRGMAFCEFHEDAVTDLA 317
Query: 211 CAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGM 270
C L+GL++G++ L VRR AS+ E +TS
Sbjct: 318 CEGLDGLEVGEQRLMVRRVNASTNTHTHEDTQ----------------ETS--------- 352
Query: 271 SLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP------- 323
+T + + + +T D L DD EY++I ED+ EC ++GT+ +V IPRP
Sbjct: 353 ----DTPTRAMLMLNMVTTDELLDDTEYQDIKEDVHSECSRHGTVTSVYIPRPLAAAAGH 408
Query: 324 -----DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPED 371
+G E GVG+V++++ A C A A++GR+F G TV Y +D
Sbjct: 409 ATSADAASGMEPKGVGRVYVQFVHADECEAALRAIAGRQFDGRTVICAYVRDD 461
>gi|116192501|ref|XP_001222063.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
gi|88181881|gb|EAQ89349.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
Length = 566
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 182/358 (50%), Gaps = 43/358 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R+ + LP ++++ FF+ + G N D + +I E+ FA VE R
Sbjct: 234 SRQSKRLIISNLPASVTDESLTNFFNLQLN--GLNVIETADPCLQAHIAAERAFAMVEFR 291
Query: 89 TVEEASNAMALDGIIFE----------GVA---VRVRRPTDYNPTLAAALGPGQPSPNLN 135
+A+ A+ALDGI E G A + +RRP DY + A + PN +
Sbjct: 292 NNTDATVALALDGISMEADDAHAANGNGTAPQGLHIRRPKDY--IVPAVVE----DPNYD 345
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+ +S + + P+++ V LP Y TE Q+ ELL SFG L F LVKD T S+G
Sbjct: 346 PDSDRPSSVVV---DSPNKISVTNLPLYLTEDQVMELLVSFGKLKSFVLVKDNGTEESRG 402
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
F Y DP VT +A L+ + +G++ L V++A+ + Q + +
Sbjct: 403 IAFLEYADPGVTTVAIQGLHNMMLGERALKVQKASIG-----------ITQVSGEMGVNA 451
Query: 256 MALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL 315
M++ +G + G +VL L +T D L D+++YEEI +D++EEC K+G +
Sbjct: 452 MSM-LAGTTSADAGA-------GRVLQLLNMVTPDELMDNDDYEEIRDDVQEECEKFGKI 503
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+++ IPRP ++ GVGK+F+++ A AL+GRKF TV Y+PE+ +
Sbjct: 504 LSIKIPRPAGGSRQSAGVGKIFIKFETPETATKALQALAGRKFADRTVVTTYFPEENF 561
>gi|452979953|gb|EME79715.1| hypothetical protein MYCFIDRAFT_81194 [Pseudocercospora fijiensis
CIRAD86]
Length = 552
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 189/387 (48%), Gaps = 51/387 (13%)
Query: 7 PFGATQLGAFPLMP-----VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
P +L AF P + + R ++R+ + +P A + I FF+ + G
Sbjct: 195 PMDPQKLQAFMNQPGNQASSTALKPSSARQSKRLLIHNIPAAATDDNIVDFFNLQLN--G 252
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIF-----------EGVA-- 108
N D V+ I+ E +A VE +T E+A+NAMA DGI G A
Sbjct: 253 LNVTRGQDPCVSAQISKENGYALVEFKTPEDATNAMAFDGINMMPDAMDTNGDSNGTAKG 312
Query: 109 VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQ 168
++++RP DY + P N + G+ SG + + +++ + LP + E Q
Sbjct: 313 LQIKRPKDY-------IVPNVTDETENPS--GILSGVVPDTQ--NKISITNLPTFLGEDQ 361
Query: 169 IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
I+ELL SFG L F LVKD T S+G FC Y+DP+VT A +LNG+++GD + V+
Sbjct: 362 IQELLNSFGELRNFVLVKDTSTEESRGIAFCEYKDPSVTKTAVESLNGMELGDAAMKVKL 421
Query: 229 ATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAIT 288
A+ + Q +++ M+L G G +VLCL IT
Sbjct: 422 ASIG-----------IQQVPGEMSVNAMSLM--------AGTQAEGTEKGRVLCLMNMIT 462
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT 348
+ L D +E +EIL D++EE KYG L++V +PRP + G+GK++L+Y A
Sbjct: 463 PEELMDADEADEILVDVKEEVSKYGPLLDVKMPRPTGGSRQNNGIGKIYLKYESPDSAAK 522
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKYFN 375
A AL+GRKF TV Y+ E+ YF+
Sbjct: 523 ALAALAGRKFADRTVVVTYFGEE-YFD 548
>gi|340780291|pdb|2YH0|A Chain A, Solution Structure Of The Closed Conformation Of Human
U2af65 Tandem Rrm1 And Rrm2 Domains
gi|340780292|pdb|2YH1|A Chain A, Model Of Human U2af65 Tandem Rrm1 And Rrm2 Domains With
Eight-Site Uridine Binding
Length = 198
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 129/199 (64%), Gaps = 10/199 (5%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+
Sbjct: 4 ARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVD 62
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
E + AMA DGIIF+G ++++RRP DY P PG S N ++ G+ S + +
Sbjct: 63 ETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDS 113
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC Y D VTD A
Sbjct: 114 AHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAI 173
Query: 212 AALNGLKMGDKTLTVRRAT 230
A LNG+++GDK L V+RA+
Sbjct: 174 AGLNGMQLGDKKLLVQRAS 192
>gi|317029342|ref|XP_001391373.2| splicing factor u2af large subunit [Aspergillus niger CBS 513.88]
Length = 561
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 184/399 (46%), Gaps = 67/399 (16%)
Query: 2 AQNMLPFGATQLGAFPLMP------VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQ 55
A P ++L AF P + +R A+R++V +P + + FF+
Sbjct: 198 APRQQPMDPSRLQAFMNQPAGGNADTSTLKPSNSRQAKRLFVYNIPESVTGETLLAFFNV 257
Query: 56 VMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE---------- 105
+ G N D ++ + + FA +E ++ +A+ A+A DGI E
Sbjct: 258 QLN--GLNVIQSVDPCISAQVAQDHTFALLEFKSPNDATVALAFDGIAMEEHEAAGNGAA 315
Query: 106 ---GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG--AEGPDRVFVGGL 160
+ VRRP DY + PG A G + + P+++ V +
Sbjct: 316 NGAAQGLEVRRPKDY-------IVPGG-------AEQEYQEGVLLNEVPDSPNKICVSNI 361
Query: 161 PYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMG 220
P+Y E + LL+SFG L F LVKD T S+G FC Y DP+ T IA LNG+++G
Sbjct: 362 PHYIPEEPVTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELG 421
Query: 221 DKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA-- 278
D+ L V RA+ Q +G++ MS+F +T +
Sbjct: 422 DRHLKVVRASIG------------------------MTQAAGLDMGVNAMSMFAKTTSQD 457
Query: 279 ----KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
+VL L +T + L D E+Y+EI +D+R+EC KYGT+V + +PRP ++PGVG
Sbjct: 458 LETSRVLQLLNMVTPEELMDPEDYDEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVG 517
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
K+F+++ A AL+GRKF TV Y+ E+ +
Sbjct: 518 KIFVKFDTVESTTNALKALAGRKFSDRTVVTTYFSEENF 556
>gi|327297188|ref|XP_003233288.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
gi|326464594|gb|EGD90047.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
Length = 563
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 175/370 (47%), Gaps = 58/370 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R++ +PP E + FF+ + G N D +V I+ + KFA +E
Sbjct: 223 SRQSKRLFAHNIPPNVTEDTLQQFFNLQLN--GLNVISGVDPCQSVQISKDGKFALLEFN 280
Query: 89 TVEEASNAMALDGIIFEG---------------VAVRVRRPTDYNPTLAAALGPGQPSPN 133
T +A+ A+A DGI E + + RP DY L P Q
Sbjct: 281 TAADATVALAFDGITMEEHEANRESNGESNGNVKGLTIVRPKDYIVPLPTDEEPRQE--- 337
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
G+ S + + P+++ V +P + E Q+ LL SFG L F LVKD T S
Sbjct: 338 ------GVVSSNV--PDSPNKICVSNIPPFIQEDQVTMLLVSFGELKSFVLVKDVGTDES 389
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
+G FC Y D A T IA LNG+++GD+ L V RA+ +
Sbjct: 390 RGIAFCEYLDSASTGIAVEGLNGMELGDRRLKVNRASIGT-------------------- 429
Query: 254 QKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMRE 307
+Q +G++ MS+F +T + +VL L +TAD L D+E+YEEI ED++E
Sbjct: 430 ----VQAAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTADELIDNEDYEEICEDVQE 485
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
EC KYG + + IPRP + GVGK+++++ A AL+GRKF TV Y
Sbjct: 486 ECSKYGVVEELKIPRPSAGSRQAAGVGKIYVKFDTPESATKALQALAGRKFQDRTVVTTY 545
Query: 368 YPEDKYFNKD 377
+ E + N +
Sbjct: 546 FSEASHSNSN 555
>gi|389642205|ref|XP_003718735.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
gi|351641288|gb|EHA49151.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
Length = 620
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 175/364 (48%), Gaps = 56/364 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R+ + LP E ++ +F + + + N D + + + FA VE R
Sbjct: 289 SRQSKRLILSNLPAGTTEDSLISFLNLQLNGL--NVIEASDPCLACQMAPDGSFAMVEFR 346
Query: 89 TVEEASNAMALDGIIFE----------GVAVR---VRRPTDYNPTLAAALGPGQPSPNLN 135
+ + + A ALDGI E G A + +RRP DY + A + P
Sbjct: 347 SPSDTTVAYALDGISMEAEDAGNGDANGAASKGLAMRRPKDY--IVPAVVDDTGYEP--- 401
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
G+ S + + P ++ V LP Y T+ Q+ ELL SFG L L KD T S+G
Sbjct: 402 ----GVVSSRV--VDTPHKISVTNLPAYLTDEQVVELLSSFGELKALVLAKDSSTEESRG 455
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
FC Y D TD+A LNG+++GDK L VR+A+ I I
Sbjct: 456 IAFCEYVDVTNTDVAIEGLNGMELGDKRLKVRKAS--------------------IGI-- 493
Query: 256 MALQTSGMNTLGGGMSLFGETLAK------VLCLTEAITADALADDEEYEEILEDMREEC 309
Q SGM MS+ T+A+ VL L +TAD L D+++YEEI ED++EEC
Sbjct: 494 --TQVSGMEMGVNAMSMLAGTVAQDPDLSPVLQLLNMVTADELMDNDDYEEICEDVQEEC 551
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
KYGT++ + +PRP + GVGK+++++ A AL GRKF TV Y+P
Sbjct: 552 AKYGTVIELKVPRPSSGAKQAAGVGKIYVKFDSIESSTKALKALGGRKFADRTVVTTYFP 611
Query: 370 EDKY 373
E+ +
Sbjct: 612 EENF 615
>gi|440468063|gb|ELQ37246.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae Y34]
gi|440489023|gb|ELQ68704.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae P131]
Length = 640
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 175/364 (48%), Gaps = 56/364 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R+ + LP E ++ +F + + + N D + + + FA VE R
Sbjct: 289 SRQSKRLILSNLPAGTTEDSLISFLNLQLNGL--NVIEASDPCLACQMAPDGSFAMVEFR 346
Query: 89 TVEEASNAMALDGIIFE----------GVAVR---VRRPTDYNPTLAAALGPGQPSPNLN 135
+ + + A ALDGI E G A + +RRP DY + A + P
Sbjct: 347 SPSDTTVAYALDGISMEAEDAGNGDANGAASKGLAMRRPKDY--IVPAVVDDTGYEP--- 401
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
G+ S + + P ++ V LP Y T+ Q+ ELL SFG L L KD T S+G
Sbjct: 402 ----GVVSSRV--VDTPHKISVTNLPAYLTDEQVVELLSSFGELKALVLAKDSSTEESRG 455
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
FC Y D TD+A LNG+++GDK L VR+A+ I I
Sbjct: 456 IAFCEYVDVTNTDVAIEGLNGMELGDKRLKVRKAS--------------------IGI-- 493
Query: 256 MALQTSGMNTLGGGMSLFGETLAK------VLCLTEAITADALADDEEYEEILEDMREEC 309
Q SGM MS+ T+A+ VL L +TAD L D+++YEEI ED++EEC
Sbjct: 494 --TQVSGMEMGVNAMSMLAGTVAQDPDLSPVLQLLNMVTADELMDNDDYEEICEDVQEEC 551
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
KYGT++ + +PRP + GVGK+++++ A AL GRKF TV Y+P
Sbjct: 552 AKYGTVIELKVPRPSSGAKQAAGVGKIYVKFDSIESSTKALKALGGRKFADRTVVTTYFP 611
Query: 370 EDKY 373
E+ +
Sbjct: 612 EENF 615
>gi|328865493|gb|EGG13879.1| RapGAP/RanGAP domain-containing protein [Dictyostelium fasciculatum]
Length = 3032
Score = 176 bits (445), Expect = 2e-41, Method: Composition-based stats.
Identities = 117/375 (31%), Positives = 190/375 (50%), Gaps = 41/375 (10%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN-SAGPGDAVVNVYINHEKKFAFV 85
Q + +RR+Y+G +PP + + FF+ +TA + S+ G V++ IN K FAF+
Sbjct: 2570 QQNKQSRRLYIGNIPPNITDNTLIDFFNTAITAANLHLSSKTGPVVLSCQINSAKNFAFL 2629
Query: 86 EMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGA 145
E R+ EEA+NAM LDGI ++++RRPTDY P + P P ++ + S
Sbjct: 2630 EFRSAEEATNAMGLDGISLFTFSLKIRRPTDYQPPANESSMPSAP------VSMSIVSTN 2683
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ +E +++F+GG+P E QIK +L +FG L F+LVKD TG+SKGY FC Y +
Sbjct: 2684 VPDSE--NKIFIGGIPTTLNEEQIKSMLLAFGRLKAFNLVKDPKTGSSKGYAFCEYYETE 2741
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKT----------------------EQESI 243
T+ LNG K G+K+L V+R++ + T ++S+
Sbjct: 2742 ETNDCINGLNGTKFGEKSLVVQRSSVGTKDPSTTSTNNNNNNNNNNNNNNANMNSNRKSV 2801
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLF----GETLAKVLCLTEAITADALADDEEYE 299
Q Q + L +S LG S + V+ L + + + DD +YE
Sbjct: 2802 TTFDQS--VTQMLNLASSIPQVLGTIRSNIPSDSNTKSSTVIQLFNLVDREDIQDDSDYE 2859
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETP-GVGKVFLEYYDAVGCATAKNALSGRKF 358
+L D++EEC ++G + ++ I RP + E P + KVF+++ A ++ GR++
Sbjct: 2860 NLLIDVKEECEEFGEVESIFISRPKE---ENPLDIVKVFVKFVSLESAQRAWMSIGGRRY 2916
Query: 359 GGNTVNAFYYPEDKY 373
T+ +YPED Y
Sbjct: 2917 NYRTIITAFYPEDFY 2931
>gi|429854658|gb|ELA29655.1| splicing factor u2af large subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 559
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 181/355 (50%), Gaps = 41/355 (11%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R+ + LPP A E +I FF+ + G N D + ++ + FA VE R
Sbjct: 231 SRQAKRLLINNLPPSATEDSIVGFFNLQLN--GLNVIESTDPCTSCQLSKDHSFAVVEFR 288
Query: 89 TVEEASNAMALDGIIFE------GVA----VRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
EA+ A+ALDGI E G A + +RRP DY P +P
Sbjct: 289 NASEATVALALDGITMEADDATNGAAGSNGLVIRRPKDYIVPAVVDDVPYEP-------- 340
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
G+ S + + P+++ + +P Y ++ Q+ ELL SFG L F LV+D+ T S+G F
Sbjct: 341 -GVVSNIV--IDTPNKISIANMPPYLSDEQVTELLVSFGELKAFVLVRDKSTEESRGIAF 397
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
C Y +P+ TD+A LNG+ +GDK L V++A+ Q + + +
Sbjct: 398 CEYVEPSATDVAIQGLNGMDLGDKKLRVQKASVGVTQ-----------------VAGVEM 440
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
+ M+ L G S E +VL L +T + L D+++YEEI ED+ EEC K+G +++V
Sbjct: 441 GVAAMSMLAGTTSTDSEE-TRVLQLLNMVTPEELMDNDDYEEIKEDVEEECTKFGKVLDV 499
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
IPRP ++ GVGK+F+ + A AL+GRKF TV Y+PE+ +
Sbjct: 500 KIPRPVGGSRQSAGVGKIFVRFESKEVAKKALQALAGRKFADRTVVTTYFPEENF 554
>gi|350635494|gb|EHA23855.1| hypothetical protein ASPNIDRAFT_209800 [Aspergillus niger ATCC
1015]
Length = 566
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 181/391 (46%), Gaps = 67/391 (17%)
Query: 7 PFGATQLGAFPLMP------VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
P ++L AF P + +R A+R++V +P + + FF+ +
Sbjct: 188 PMDPSRLQAFMNQPAGGNADTSTLKPSNSRQAKRLFVYNIPESVTGETLLAFFNVQLN-- 245
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE-------------GV 107
G N D ++ + + FA +E ++ +A+ A+A DGI E
Sbjct: 246 GLNVIQSVDPCISAQVAQDHTFALLEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQ 305
Query: 108 AVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG--AEGPDRVFVGGLPYYFT 165
+ VRRP DY + PG A G + + P+++ V +P+Y
Sbjct: 306 GLEVRRPKDY-------IVPGG-------AEQEYQEGVLLNEVPDSPNKICVSNIPHYIP 351
Query: 166 ETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLT 225
E + LL+SFG L F LVKD T S+G FC Y DP+ T IA LNG+++GD+ L
Sbjct: 352 EEPVTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELGDRHLK 411
Query: 226 VRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------K 279
V RA+ Q +G++ MS+F +T + +
Sbjct: 412 VVRASIG------------------------MTQAAGLDMGVNAMSMFAKTTSQDLETSR 447
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L +T + L D E+Y+EI +D+R+EC KYGT+V + +PRP ++PGVGK+F++
Sbjct: 448 VLQLLNMVTPEELMDPEDYDEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGKIFVK 507
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
+ A AL+GRKF TV Y+ E
Sbjct: 508 FDTVESTTNALKALAGRKFSDRTVVTTYFSE 538
>gi|134075845|emb|CAL00224.1| unnamed protein product [Aspergillus niger]
Length = 598
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 181/391 (46%), Gaps = 67/391 (17%)
Query: 7 PFGATQLGAFPLMP------VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
P ++L AF P + +R A+R++V +P + + FF+ +
Sbjct: 220 PMDPSRLQAFMNQPAGGNADTSTLKPSNSRQAKRLFVYNIPESVTGETLLAFFNVQLN-- 277
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE-------------GV 107
G N D ++ + + FA +E ++ +A+ A+A DGI E
Sbjct: 278 GLNVIQSVDPCISAQVAQDHTFALLEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQ 337
Query: 108 AVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG--AEGPDRVFVGGLPYYFT 165
+ VRRP DY + PG A G + + P+++ V +P+Y
Sbjct: 338 GLEVRRPKDY-------IVPGG-------AEQEYQEGVLLNEVPDSPNKICVSNIPHYIP 383
Query: 166 ETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLT 225
E + LL+SFG L F LVKD T S+G FC Y DP+ T IA LNG+++GD+ L
Sbjct: 384 EEPVTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPSATTIAVEGLNGMELGDRHLK 443
Query: 226 VRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA------K 279
V RA+ Q +G++ MS+F +T + +
Sbjct: 444 VVRASIG------------------------MTQAAGLDMGVNAMSMFAKTTSQDLETSR 479
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L +T + L D E+Y+EI +D+R+EC KYGT+V + +PRP ++PGVGK+F++
Sbjct: 480 VLQLLNMVTPEELMDPEDYDEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGKIFVK 539
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
+ A AL+GRKF TV Y+ E
Sbjct: 540 FDTVESTTNALKALAGRKFSDRTVVTTYFSE 570
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 178/367 (48%), Gaps = 57/367 (15%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R A+R++V P + + +I FF+ + + N D ++V I+ ++ FA E +
Sbjct: 18 SRQAKRLFVYNFPAASTDDSIQDFFNLQLNHL--NVISSSDPCISVQISKDRTFALCEFK 75
Query: 89 TVEEASNAMALDGIIFEG------------VAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
T E+ + A+ALDG E +++ RP DY + P Q S + +
Sbjct: 76 TPEDTTMALALDGQSMEAEDASNGASNGGHSGIKISRPKDY-------IVPAQ-SDDADY 127
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
G+ S + +GP ++ V +P Y TE Q+ +LL +FG L F LVKD T SKG
Sbjct: 128 QE-GVVSNKV--KDGPHKICVAQIPVYLTEEQVMDLLSAFGGLKAFTLVKDTGTDQSKGI 184
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
FC Y DP TD A L+G+++ L V++A + IQ
Sbjct: 185 AFCEYVDPDTTDPAVEGLDGMEIAQDHLKVKKAC--------------------VGIQ-- 222
Query: 257 ALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECG 310
Q SG+ MS+ T + +VL L +T + L D +EYEEI ED+ EEC
Sbjct: 223 --QASGLEMGVNAMSMLAGTSSGDVEQGRVLMLLNMVTPEELMDPQEYEEIQEDVHEECS 280
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
KYG + + IPRP Q E GVGK+F++Y A AL+GRKF TV ++ E
Sbjct: 281 KYGKVEELKIPRP-QPPKENKGVGKIFVKYDTPESAQKALRALAGRKFADRTVVVTFFGE 339
Query: 371 DKYFNKD 377
+ YF+ D
Sbjct: 340 E-YFDVD 345
>gi|312078073|ref|XP_003141580.1| U2af splicing factor protein 1 [Loa loa]
Length = 460
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 157/283 (55%), Gaps = 36/283 (12%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
V V+ T +RR+YVG +P +E A+ FF+Q M + G + PG+ V+ +N +K
Sbjct: 178 VPVVGPSVTCQSRRLYVGNIPFGCSEDAMLDFFNQQMH-LCGLAQAPGNPVLACQMNLDK 236
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
FAF+E R+++E + MA DGI F G +++RRP DY P S + +L +
Sbjct: 237 NFAFIEFRSIDETTAGMAFDGINFMGQQLKIRRPRDYQPM----------STSYDLGNMM 286
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+++ + P ++F+GGLP Y Q+KELL SFG L F+LV ++ TG SKGY F
Sbjct: 287 VSNIV---PDSPHKIFIGGLPSYLNAEQVKELLSSFGQLKAFNLVTEQSTGVSKGYAFAE 343
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA-LQ 259
Y DP++TD A A LNG+++GDK L V+ + A+ A+ ++A +Q
Sbjct: 344 YLDPSLTDQAIAGLNGMQLGDKNLVVQLSCAN--------------ARNNVAQNTFPQIQ 389
Query: 260 TSGMN-TLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEI 301
+G++ + G G +VLCL +T D L DDEEYE I
Sbjct: 390 VAGIDLSHGAGPP------TEVLCLMNMVTEDELKDDEEYEGI 426
>gi|378731414|gb|EHY57873.1| U2AF domain-containing protein (UHM) kinase 1 [Exophiala
dermatitidis NIH/UT8656]
Length = 574
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 187/398 (46%), Gaps = 71/398 (17%)
Query: 3 QNMLPFGATQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQVM 57
Q M P ++L AF +P A +R ARR++V LP +E+A+ FF+ +
Sbjct: 211 QQMDP---SRLQAFMNLPSSSSNNTALKPSNSRQARRLFVHNLPASVSEEALVQFFNLQL 267
Query: 58 TAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG----------- 106
G N D I ++ FA VE + +A+ A+ALDGI
Sbjct: 268 N--GLNVTKAVDPCAQANIAEDRSFALVEFKNASDATLALALDGITMPEHHSEMNGNGDA 325
Query: 107 --------VAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVG 158
+ +RRP DY PS + A G S + + +++ V
Sbjct: 326 NGNGTAAPKGLEIRRPKDY----------IVPSADEATYAEGEISSEV--PDTANKLAVT 373
Query: 159 GLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLK 218
LP + T+ Q+ ELL++FG + F LV++ D+ S+G FC Y DPA T +A LNG+
Sbjct: 374 NLPPFLTDDQVIELLKAFGEVKAFVLVREPDSQESRGIAFCEYADPASTAVAIEGLNGMD 433
Query: 219 MGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA 278
+ ++ V RA+ I Q Q +G++ MS+F T +
Sbjct: 434 LAGNSIKVTRAS--------------------IGYQ----QAAGLDMGVNAMSMFAGTTS 469
Query: 279 ------KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPG 332
+VL L +T + L D+++YEEI ED+ EEC KYG ++++ IPRP ++ G
Sbjct: 470 DAHDEGRVLQLLNMVTPEDLMDNDDYEEICEDVMEECSKYGKILSMKIPRPSGGSRQSAG 529
Query: 333 VGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
VGK+FL+Y DA A AL+GRKF TV Y+ E
Sbjct: 530 VGKIFLKYEDAESAKKALQALAGRKFADRTVVTTYFDE 567
>gi|452841884|gb|EME43820.1| hypothetical protein DOTSEDRAFT_71600 [Dothistroma septosporum
NZE10]
Length = 433
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 182/363 (50%), Gaps = 52/363 (14%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R ++R+ + +P A E I FF+ + G N D ++ ++ +K +A +E +T
Sbjct: 102 RQSKRLLIYNIPASATEDTIMDFFNLQLN--GLNVTRGADPCISAQLSQDKAYALLEFKT 159
Query: 90 VEEASNAMALDGIIFEGVA---------------VRVRRPTDYNPTLAAALGPGQPSPNL 134
E+A+NAMA DGI E A + ++RP DY + + G +
Sbjct: 160 PEDATNAMAFDGINMEPEAMVTSGNEDENGGARGLDIKRPKDY---IVPVVTDGTEN--- 213
Query: 135 NLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK 194
G+ S + + +++ + +P Y E Q ELL SFG L F LVKD T S+
Sbjct: 214 ---DAGVLSNVVPDTQ--NKISITNIPAYVDEEQTMELLNSFGELKNFVLVKDASTEESR 268
Query: 195 GYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQ 254
G FC Y+DP T +A +L+G+ +GD + VR A+ I IQ
Sbjct: 269 GIAFCEYKDPNSTKVAVESLHGMTLGDAAMKVRLAS--------------------IGIQ 308
Query: 255 KMA--LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKY 312
+++ + + M+ + G GE +VL L IT + L D +E +EILED++EEC KY
Sbjct: 309 QVSGEMSVNAMSLMAGTARADGEG-GRVLSLMNMITPEELMDPDEADEILEDVKEECAKY 367
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
G L++V +PRP ++ G+GK++L+Y A A AL+GRKF TV Y+ E+
Sbjct: 368 GPLLDVKMPRPTGGSRQSNGIGKIYLKYESTESAAKALAALAGRKFADRTVVVTYFGEE- 426
Query: 373 YFN 375
YF+
Sbjct: 427 YFD 429
>gi|47217926|emb|CAG02209.1| unnamed protein product [Tetraodon nigroviridis]
Length = 600
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 123/213 (57%), Gaps = 18/213 (8%)
Query: 167 TQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV 226
++KELL SFG L F+LVKD T SKGY FC Y D TD A A LNG+++GDK L V
Sbjct: 405 VKVKELLTSFGPLKAFNLVKDGATSLSKGYAFCEYVDVGATDQAVAGLNGMQLGDKKLIV 464
Query: 227 RRATASSGQSKTEQESILAQAQQHIAIQKMA-LQTSGMNTLGGGMSLFGETLAKVLCLTE 285
+RA+ +K S A+A + + + LQTSG+ T +VLCL
Sbjct: 465 QRASVG---AKNANPSAAAEAPVTLQVPGLQRLQTSGVPT-------------EVLCLLN 508
Query: 286 AITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVG 345
+ + L DDE+YEEILED+REEC KYG + ++ IPRP +G E PG GK+F+EY A
Sbjct: 509 MVVPEELVDDEDYEEILEDVREECCKYGGVRSIEIPRP-VDGVEVPGCGKIFVEYVSASD 567
Query: 346 CATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
C A AL+GRKF V YY D Y ++
Sbjct: 568 CQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF 600
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 45/192 (23%)
Query: 20 PVQVMTQQATRHARRVYVGGLP---------PLANEQAIATFFSQVMTAIGGNSAGPGDA 70
PV V Q TR ARR+YVG +P + ++++A FF+ M + G S P +
Sbjct: 156 PVPVAGSQMTRQARRLYVGNIPFGLTEALRRLCSPQESMAEFFNAQMR-LAGLSQAPSNP 214
Query: 71 VVNVYINHEKKFAFVEMR-------------TVEEASNAMALDGIIFEGVAVRVRR---- 113
V+ V IN +K FAF+E+R + ++ L G G +R R
Sbjct: 215 VLAVQINQDKNFAFLEVRPGFSAAAALPAAAAAADVCVSVPLGGRDHAGHGLRRHRVPGS 274
Query: 114 ----PTDYN-PTLAAALG-PGQPSPNL----------NLAAVGLASGAIGGAEGPDRVFV 157
PT P A LG G P P G+ S + + P ++F+
Sbjct: 275 GSEDPTASRLPASARHLGAAGVPRPRFLRAAARHAARVGRRPGVVSTVV--PDSPHKLFI 332
Query: 158 GGLPYYFTETQI 169
GGLP Y + Q+
Sbjct: 333 GGLPNYLNDDQV 344
>gi|402073699|gb|EJT69251.1| splicing factor U2AF 50 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 623
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 177/360 (49%), Gaps = 48/360 (13%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R+ V P E+A+ F + + + N D + + + FA +E R
Sbjct: 292 SRQSKRLIVTNFAPGTTEEALVAFMNLQLNGL--NVIESTDPCLLCQMAPDSSFAILEFR 349
Query: 89 TVEEASNAMALDGIIFE-------GVA------VRVRRPTDYNPTLAAALGPGQPSPNLN 135
+ E + A+ALDGI E G A + +RRP DY + A+
Sbjct: 350 SPAETTVALALDGITMEAEDTPMEGAANGTPQGLELRRPKDY---IVPAV---------- 396
Query: 136 LAAVGLASGAIGG--AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
+ G G + + P ++ + L Y TE Q+ ELL SFG L LVKD T S
Sbjct: 397 VEDTGYERGVVSSRVVDTPHKIGITNLAPYLTEEQVTELLVSFGELKALVLVKDSGTEES 456
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAI 253
+G FC Y DP TD+A LN +++G+K L V++A+ Q +
Sbjct: 457 RGIAFCEYVDPVATDVAIHGLNNMELGEKRLRVKKASIGITQ-----------------V 499
Query: 254 QKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYG 313
+ + + M+ L G ++ + L++VL L +TAD L D+++YEEI +D+REEC K+G
Sbjct: 500 SGIEMGINAMSMLAGTVAQDPD-LSRVLQLLNMVTADELLDNDDYEEICDDVREECSKFG 558
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
T++ + IPRP + GVGK+++++ A AL+GRKF TV Y+PE+ +
Sbjct: 559 TILELKIPRPSGGARQLAGVGKIYVKFDTIESSTEALKALAGRKFADRTVVTTYFPEENF 618
>gi|112490659|pdb|2G4B|A Chain A, Structure Of U2af65 Variant With Polyuridine Tract
Length = 172
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 30/199 (15%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+
Sbjct: 4 ARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVD 62
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
E + AMA DGIIF+G ++++RRP DY QP P G
Sbjct: 63 ETTQAMAFDGIIFQGQSLKIRRPHDY-----------QPLP------------------G 93
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC Y D VTD A
Sbjct: 94 AHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAI 153
Query: 212 AALNGLKMGDKTLTVRRAT 230
A LNG+++GDK L V+RA+
Sbjct: 154 AGLNGMQLGDKKLLVQRAS 172
>gi|342873171|gb|EGU75391.1| hypothetical protein FOXB_14096 [Fusarium oxysporum Fo5176]
Length = 661
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 190/388 (48%), Gaps = 52/388 (13%)
Query: 2 AQNMLPFGATQLGAFPLMPVQVMTQ-----QATRHARRVYVGGLPPLANEQAIATFFSQV 56
A P ++L AF P +T +R ++R+ V +P +E+A+ +FF+
Sbjct: 210 APRQQPMDPSKLQAFMNQPGGQVTSAGLKANNSRQSKRLLVSRIPSGTSEEALMSFFNLQ 269
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGV--------- 107
+ G N D V ++++ FA +E + EA+ A+A+DGI E
Sbjct: 270 LN--GLNVIDTTDPCVLCQFSNDRSFAVIEFKDAPEATVALAMDGISMEASDASNGTDGG 327
Query: 108 --AVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG--AEGPDRVFVGGLPYY 163
+ +RRP DY + A+ V S + + +++ + +P +
Sbjct: 328 HRGLEIRRPRDY---VVPAV----------TEEVSYDSEVVSNIVPDTVNKLSITNIPTF 374
Query: 164 FTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD-IACAALNGLKMGDK 222
TE QI ELL SFG F LVKDR T S+G F YQDPA ++ A LNG+++G K
Sbjct: 375 LTEEQIIELLASFGKPKAFVLVKDRGTEESRGIAFAEYQDPAASNPTALDTLNGMEIGGK 434
Query: 223 TLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLC 282
L V +A+ Q I AI +A QT+ N + ++VL
Sbjct: 435 KLKVSKASIGPTQVANFDVGI-------TAISGLASQTA--NEVES---------SRVLQ 476
Query: 283 LTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYD 342
L +TA+ L D+++YEEI ED++EEC K+G +++V +PRP ++ GVGK+F++Y
Sbjct: 477 LLNMVTAEELLDNDDYEEICEDVKEECSKFGKIIDVKVPRPTGGSRQSAGVGKIFVKYEK 536
Query: 343 AVGCATAKNALSGRKFGGNTVNAFYYPE 370
A A A AL+GRKF TV Y+PE
Sbjct: 537 AEDTAKALQALAGRKFADRTVVTTYFPE 564
>gi|384500209|gb|EIE90700.1| hypothetical protein RO3G_15411 [Rhizopus delemar RA 99-880]
Length = 490
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 164/351 (46%), Gaps = 74/351 (21%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
AT+ ARR+YVG +PP E+ +A FF+ M + P V V INHEK +AFVE
Sbjct: 214 ATKQARRLYVGQIPPGLEEKPLADFFNATMHQLQMQDRTP---VAAVQINHEKSYAFVEF 270
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIG 147
+T E+A+ MA DGI+F+G +++RRP DY P ++++ GL S +
Sbjct: 271 QTAEQATACMAFDGIMFQGQQLKIRRPKDYQPPAEG---------DVSMQLPGLVSTNV- 320
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
+ P+++F+GGLP Y + Q+ ELL+SF
Sbjct: 321 -PDTPNKIFIGGLPVYLNDDQVIELLKSF------------------------------- 348
Query: 208 DIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLG 267
GD+ L V+RA+ + +HI M+ N +
Sbjct: 349 ------------GDRKLIVQRASVGA---------------KHIPPDYMSGPMLPANYV- 380
Query: 268 GGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNG 327
S + +VL L +T + L DDEEY++I ED+ EEC K+G ++++ IP+P Q
Sbjct: 381 PVTSAKEDDATRVLQLMNMVTPEELEDDEEYQDIWEDIAEECAKFGNVLDMKIPKP-QKD 439
Query: 328 GETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E PG G +F+ + A AL+GRKF TV A + E Y +
Sbjct: 440 QEVPGCGLIFVRFETKDQTLDALRALAGRKFADRTVVATFIDEQNYLTDSF 490
>gi|449802099|pdb|3VAF|A Chain A, Structure Of U2af65 Variant With Bru3 Dna
gi|449802100|pdb|3VAF|B Chain B, Structure Of U2af65 Variant With Bru3 Dna
gi|449802101|pdb|3VAG|A Chain A, Structure Of U2af65 Variant With Bru3c2 Dna
gi|449802102|pdb|3VAG|B Chain B, Structure Of U2af65 Variant With Bru3c2 Dna
gi|449802103|pdb|3VAH|A Chain A, Structure Of U2af65 Variant With Bru3c4 Dna
gi|449802104|pdb|3VAH|B Chain B, Structure Of U2af65 Variant With Bru3c4 Dna
gi|449802105|pdb|3VAI|A Chain A, Structure Of U2af65 Variant With Bru3c5 Dna
gi|449802106|pdb|3VAI|B Chain B, Structure Of U2af65 Variant With Bru3c5 Dna
gi|449802107|pdb|3VAJ|A Chain A, Structure Of U2af65 Variant With Bru5c6 Dna
gi|449802108|pdb|3VAJ|B Chain B, Structure Of U2af65 Variant With Bru5c6 Dna
gi|449802109|pdb|3VAK|A Chain A, Structure Of U2af65 Variant With Bru5 Dna
gi|449802110|pdb|3VAK|B Chain B, Structure Of U2af65 Variant With Bru5 Dna
gi|449802113|pdb|3VAL|A Chain A, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802114|pdb|3VAL|B Chain B, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802115|pdb|3VAL|D Chain D, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802116|pdb|3VAL|I Chain I, Structure Of U2af65 Variant With Bru5c1 Dna
gi|449802117|pdb|3VAM|A Chain A, Structure Of U2af65 Variant With Bru5c2 Dna
gi|449802118|pdb|3VAM|B Chain B, Structure Of U2af65 Variant With Bru5c2 Dna
Length = 174
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 30/199 (15%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+
Sbjct: 6 ARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVD 64
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
E + AMA DGIIF+G ++++RRP DY QP P G
Sbjct: 65 ETTQAMAFDGIIFQGQSLKIRRPHDY-----------QPLP------------------G 95
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC Y D VTD A
Sbjct: 96 AHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAI 155
Query: 212 AALNGLKMGDKTLTVRRAT 230
A LNG+++GDK L V+RA+
Sbjct: 156 AGLNGMQLGDKKLLVQRAS 174
>gi|344251408|gb|EGW07512.1| Splicing factor U2AF 65 kDa subunit [Cricetulus griseus]
Length = 422
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 159/283 (56%), Gaps = 25/283 (8%)
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIG 147
R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++ G+ S +
Sbjct: 26 RSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVPGVVSTVV- 77
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
+ ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC Y D VT
Sbjct: 78 -PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVT 136
Query: 208 DIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLG 267
D A A LNG+++GDK L V+RA+ + + ++ Q + +Q L +S + +G
Sbjct: 137 DQAIAGLNGMQLGDKKLLVQRASVGAKNA-----TLSTINQTPVTLQVPGLMSSQVQ-MG 190
Query: 268 GGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNG 327
G + +VLCL + + L DDEEYEEI+ED+R+EC KYG + ++ IPRP +G
Sbjct: 191 GHPT-------EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDG 242
Query: 328 GETPGVGK--VFLEYYDAVGCATAKNALSGRKFGGNTVNAFYY 368
E PG GK +EY G + T+ F Y
Sbjct: 243 VEVPGCGKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQY 285
>gi|408397958|gb|EKJ77095.1| hypothetical protein FPSE_02739 [Fusarium pseudograminearum CS3096]
Length = 554
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 186/392 (47%), Gaps = 54/392 (13%)
Query: 2 AQNMLPFGATQLGAFPLMPVQVMTQ-----QATRHARRVYVGGLPPLANEQAIATFFSQV 56
A P ++L AF P +T +R ++R+ V +PP +E + FF+
Sbjct: 192 APRQQPMDPSKLQAFMNQPGGQVTSAGLKASNSRQSKRLLVSRIPPGTSEDTLIAFFNLQ 251
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG---------- 106
+ G N D V ++++ FA +E + E + A+ALDGI E
Sbjct: 252 LN--GLNVIDTTDPCVLCQFSNDRSFAVIEFKDAPETTVALALDGISMEANDASNGADGG 309
Query: 107 -VAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPD---RVFVGGLPY 162
+ +RRP DY + A P + V PD ++ + +P
Sbjct: 310 HRGLEIRRPRDY--VVPAVTEDVAYDPEVVSNVV------------PDTVNKLSITNIPP 355
Query: 163 YFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD-IACAALNGLKMGD 221
+ TE QI ELL SFG F LVKDR T S+G F YQDPAV++ A LNG+ +G
Sbjct: 356 FLTEEQIIELLASFGKPKAFVLVKDRGTEESRGIAFAEYQDPAVSNPTALDTLNGMDIGG 415
Query: 222 KTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVL 281
K + V +A+ Q I AI +A QT+ N + ++VL
Sbjct: 416 KQIKVSKASIGPTQVANFDVGI-------TAISGLASQTA--NEVES---------SRVL 457
Query: 282 CLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYY 341
L +TA+ L D+++YEEI ED+REEC KYG +++V +PRP ++ GVGK+F++Y
Sbjct: 458 QLLNMVTAEELLDNDDYEEICEDVREECSKYGKILDVKVPRPTGGSRQSAGVGKIFVKYE 517
Query: 342 DAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
A AL+GRKF TV Y+PE+ +
Sbjct: 518 HTEDTTKALQALAGRKFADRTVVTTYFPEENF 549
>gi|76154831|gb|AAX26240.2| SJCHGC03157 protein [Schistosoma japonicum]
Length = 258
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 155/273 (56%), Gaps = 19/273 (6%)
Query: 108 AVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTET 167
A++ RRP + P L S ++ G+ S + + P ++FVGGLPYY E
Sbjct: 3 ALKFRRPRVFAPLLGV-------SEQQSVIVPGVVSTVV--QDSPHKIFVGGLPYYLNED 53
Query: 168 QIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 227
Q+KELL SFG L GF+LVKD TG SKGY FC Y D VTD ACA LNG+++GDK L V+
Sbjct: 54 QVKELLLSFGPLKGFNLVKDGSTGLSKGYAFCEYVDSNVTDHACAGLNGMQLGDKKLIVQ 113
Query: 228 RATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLF--GETLAKVLCLTE 285
RA+ + + L Q +++ A+Q NT G G G +VLCL
Sbjct: 114 RASVGAKHTTGVLPQCLLQMS---GLEEGAVQ----NTTGSGNLTVRSGGPPTEVLCLMN 166
Query: 286 AITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVG 345
I L DDEEYE+I+ED+R EC KYG + ++ IPRP + G + PGVGK+++E+ +
Sbjct: 167 MIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIR-GIDVPGVGKIYVEFASLID 225
Query: 346 CATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
C A AL+GRKF V ++ + Y +++
Sbjct: 226 CQKAATALTGRKFNQRLVVTSFFSPNSYHRREF 258
>gi|170053756|ref|XP_001862821.1| splicing factor U2AF 50 kDa subunit [Culex quinquefasciatus]
gi|167874130|gb|EDS37513.1| splicing factor U2AF 50 kDa subunit [Culex quinquefasciatus]
Length = 382
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 129/220 (58%), Gaps = 18/220 (8%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 115 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQMH-LSGLAQAAGNPVLACQI 173
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA DGI F+G ++++RRP DY QP P +
Sbjct: 174 NLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDY-----------QPMPGMTD 222
Query: 137 AAVGLASGAIGGA------EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+AV G + P ++F+GGLP Y E Q+KELL SFG L F+LVKD T
Sbjct: 223 SAVAPVQEKFSGVISTVVPDSPHKIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAAT 282
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
G SKGY F Y + ++TD A A LNG+++GDK L V+RA+
Sbjct: 283 GLSKGYAFAEYVEYSITDQAIAGLNGMQLGDKKLIVQRAS 322
>gi|398403643|ref|XP_003853288.1| hypothetical protein MYCGRDRAFT_100024 [Zymoseptoria tritici
IPO323]
gi|339473170|gb|EGP88264.1| hypothetical protein MYCGRDRAFT_100024 [Zymoseptoria tritici
IPO323]
Length = 544
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 183/369 (49%), Gaps = 61/369 (16%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
+ R ++R+ V LP A + ++ FF+ + G N D ++ I+ +A +E
Sbjct: 212 SARQSKRLLVYNLPASATDDSLMDFFNLQLN--GLNVTKGADPCISANISQGNGYALLEF 269
Query: 88 RTVEEASNAMALDGIIFE-------------GVAVRVRRPTDY-NPTLAAALGPGQPSPN 133
+T E+A+NAMA+DGI E + ++RP DY PT++ +
Sbjct: 270 KTPEDATNAMAMDGIKMEADVDMGNGESNGTSKGLEIKRPKDYIVPTVS----------D 319
Query: 134 LNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
GL S + + +++ + +P Y E Q+ ELL SFG L F LVKD+ T S
Sbjct: 320 ETENTSGLFSSIVPDTQ--NKISITNIPVYLQEEQVVELLTSFGQLKNFVLVKDKSTEES 377
Query: 194 KGYGFCVYQDP-AVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIA 252
+G F Y+DP + T IA ALNG+ +GD L V+ A+ I
Sbjct: 378 RGIAFVEYKDPDSTTKIALEALNGMDLGDAALKVKLAS--------------------IG 417
Query: 253 IQKMALQTSGMNTLGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMR 306
IQ Q SG T+G M L T + +VLCL IT + L D +E +EILED++
Sbjct: 418 IQ----QVSGEMTVGA-MGLIAGTKSTDADNGRVLCLMNMITPEELMDADEADEILEDVK 472
Query: 307 EECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAF 366
EEC KYG L+ V +PRP + G+GK++L+Y A A AL+GRKF TV
Sbjct: 473 EECAKYGELMEVKMPRPTGGSRQNNGIGKIYLKYKAPDSAAKALGALAGRKFADRTVVVT 532
Query: 367 YYPEDKYFN 375
Y+ E+ YF+
Sbjct: 533 YFGEE-YFD 540
>gi|255931767|ref|XP_002557440.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582059|emb|CAP80223.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 554
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 169/349 (48%), Gaps = 52/349 (14%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R++V +PP + A+ FF+ + G N D ++ ++ +K FA +E +
Sbjct: 239 SRQSKRLFVYNIPPGVSGDAVIAFFNLQLN--GLNVIRSVDPCISAQVSEDKTFALLEFK 296
Query: 89 TVEEASNAMALDGIIFE---GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGA 145
+A+ A+ALDGI + VRRP DY +A P QP LN
Sbjct: 297 DPNDATVALALDGITMPESGDKGLEVRRPKDYIVPDGSAAQPVQPGVVLNEVP------- 349
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ P+++ + +P Y E I LL+SFG L F LVKD T S+G F Y DP
Sbjct: 350 ----DSPNKICISNIPTYINEEAIIMLLKSFGDLKSFILVKDAATEESRGIAFYEYVDPN 405
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
T +A LNG+++ D+ L RA+ + Q+ +G++
Sbjct: 406 NTALAVEGLNGMELADRRLKFVRASIGTTQA------------------------TGLDM 441
Query: 266 LGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
M +F +T + +VL L +T D L +DE+YEEILED+ EEC K+G ++ +
Sbjct: 442 GVNAMQMFAKTTSQDLETTQVLQLLNMVTLDELLNDEDYEEILEDVGEECSKFGKMIGIK 501
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYY 368
IPR G GK+F++Y A A AL+GRKF TV A Y+
Sbjct: 502 IPRRGH------GAGKIFIKYDTAESATNALKALAGRKFSDRTVVASYF 544
>gi|389585165|dbj|GAB67896.1| U2 snRNP auxiliary factor [Plasmodium cynomolgi strain B]
Length = 894
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 163/318 (51%), Gaps = 16/318 (5%)
Query: 76 INHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY------NPTLAAALGPGQ 129
N E +F F+E R++E + LD I F +R+ RP D+ +P L
Sbjct: 575 FNVESRFCFLEFRSLEITWLCLRLDAISFNNYCLRIARPHDFVPPPGGDPALTVVFTDIN 634
Query: 130 PSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRD 189
+ V +A G + +++++ LP+ + QI++LL+ FG L GF+++KD +
Sbjct: 635 HEVFEMVKPVKIAPVRSTG-DDDNKLYIQNLPHDLRDDQIRDLLQQFGKLKGFNVIKDLN 693
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ 249
TG +KGYGF Y+D T IA ALNG G L V++AT Q+ T+ + + A
Sbjct: 694 TGLNKGYGFFEYEDSNCTPIAMHALNGFVCGQNILNVKKATFGKSQNSTQNANTTSLATG 753
Query: 250 HI---------AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
+ +I + L S + GE ++V+ LT A+ + L D +YEE
Sbjct: 754 SVDLPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVVQLTNAVFQEDLLIDSQYEE 813
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
IL+D++EE KYG L N+VIP+P+++ T GVGK+FL Y D A+ L+GR F
Sbjct: 814 ILKDIKEEAEKYGPLQNIVIPKPNKDLSYTEGVGKIFLHYADETTARKAQYMLNGRLFEK 873
Query: 361 NTVNAFYYPEDKYFNKDY 378
V A +Y E+K+ Y
Sbjct: 874 RVVCAAFYSEEKFLAGKY 891
>gi|71028054|ref|XP_763670.1| U2 small nuclear ribonucleoprotein, auxiliary factor, large subunit
[Theileria parva strain Muguga]
gi|68350624|gb|EAN31387.1| U2 small nuclear ribonucleoprotein, auxiliary factor, large
subunit, putative [Theileria parva]
Length = 380
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 177/365 (48%), Gaps = 46/365 (12%)
Query: 26 QQATRHARRVYVGGLPPLANEQAIATFFS-QVMTAIGGNSAGPGDAVVN---VYINHEKK 81
++A + +R+YVG LP Q + FF+ +M + GN+ P D +V +Y N ++
Sbjct: 49 EEAKKRQKRLYVGNLPSGTKLQDVVDFFNGALMAMVPGNTIDPRDPLVTKTEIY-NPDQG 107
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
+ F+E +T E A A LDGI G ++++RRP D+N
Sbjct: 108 YCFLEFKTPELADLAFKLDGITCNGYSLKLRRPLDFN----------------------- 144
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
+G +VFV +P TE Q+KELLE G L +L+KD TG SKGYGF +
Sbjct: 145 ----LGTNSDDTKVFVQNIPLDVTEDQMKELLEKHGKLKLANLLKDPATGVSKGYGFFEF 200
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRAT----ASSGQSKTEQESILAQA--QQHIAIQK 255
+D + +A LNG +G L+V+ A AS G+ + S L + Q ++
Sbjct: 201 EDARSSKLAVLHLNGSVLGKNVLSVKHAAFGYFASGGKPIDCKASNLPNSITQSILSNPL 260
Query: 256 MALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL 315
+ LQ +G S KV+ L + + L D Y EI+ ++EE KYG L
Sbjct: 261 LGLQLQNGRRIGSNPS-------KVIQLLNMVFHEDLISDYNYNEIVRLVKEEAQKYGPL 313
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN-TVNAFYYPEDKYF 374
VVIPRPD++ GVGKVF+ Y D + A+ +GR F N V + ++PED +
Sbjct: 314 QEVVIPRPDKDLTFKEGVGKVFIRYEDLLSARKAQYMFNGRVFDKNRIVCSAFFPEDLFI 373
Query: 375 NKDYS 379
Y+
Sbjct: 374 TGKYT 378
>gi|167515386|ref|XP_001742034.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
gi|163778658|gb|EDQ92272.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
Length = 431
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 180/368 (48%), Gaps = 33/368 (8%)
Query: 24 MTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFA 83
M TR ARR+YVGG+P AN+ +A FF+ +T G + GPG VV+ IN EK FA
Sbjct: 82 MPNPLTRGARRLYVGGIPNGANDMELAEFFNMQLTQ-QGLTIGPGAPVVSAQINEEKSFA 140
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
F+E+R+ EEA++ +A D I+F G +R+RRP DY A G P +++
Sbjct: 141 FLELRSPEEATSCIAFDNIMFMGNQLRIRRPKDYQ----APAGGTSEVPKVDMPMPRPMP 196
Query: 144 GAIGGAEGPD--------RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
R+ V +P E Q++EL FGT+ +L K+ +T G
Sbjct: 197 MPTPMPMPTPMPMLVPSGRLNVTNIPLAMDEEQLRELFSVFGTIASLELRKEPETDKFAG 256
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQS-KTEQESILAQAQQHIAIQ 254
+ D D LN +K G + + GQ K EQ + + + ++
Sbjct: 257 DAIVEF-DTRAPDF----LNQVKAGLEDIDF------EGQKLKVEQ---VVRWWSYCGLR 302
Query: 255 KMALQTSGMNT---LGGGM--SLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
+ S +N +GG ++ +VL L +T + L DDEEY++I+ED+REEC
Sbjct: 303 ASYIAPSLVNASPFVGGAAAPAVPDVEATEVLVLMNMVTKEELQDDEEYKDIMEDIREEC 362
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
GK+G + ++ IPRP G + G+ K+F+ Y A+ ALSGR+F TV Y
Sbjct: 363 GKFGNITDLKIPRPVAEGEQPIGLEKIFIRYATVDEARNAQRALSGRRFANRTVVVSYLD 422
Query: 370 EDKYFNKD 377
K+ N +
Sbjct: 423 VAKFENDE 430
>gi|347968829|ref|XP_003436304.1| AGAP002908-PC [Anopheles gambiae str. PEST]
gi|333467822|gb|EGK96709.1| AGAP002908-PC [Anopheles gambiae str. PEST]
Length = 250
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 125/213 (58%), Gaps = 22/213 (10%)
Query: 168 QIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 227
Q+KELL SFG L F+LVKD TG KGY F Y + VTD A A LNG+++GDK L V+
Sbjct: 58 QVKELLLSFGQLKAFNLVKDAATGLGKGYAFAEYVEYTVTDQAIAGLNGMQLGDKKLIVQ 117
Query: 228 RATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGET--LAKVLCLTE 285
RA+ +K +++A Q + G+SL G + +VLCL
Sbjct: 118 RASVG---AKNSNAAVVAPVQIQVP----------------GLSLVGSSGPPTEVLCLLN 158
Query: 286 AITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVG 345
+T D L D+EEYE+ILED+REEC KYG + +V IPRP + G + PG GKVF+E+ V
Sbjct: 159 MVTPDELKDEEEYEDILEDIREECNKYGVVRSVEIPRPIE-GVDVPGCGKVFVEFNSIVD 217
Query: 346 CATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
C A+ AL+GRKF V Y+ DKY +++
Sbjct: 218 CQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 250
>gi|320590609|gb|EFX03052.1| splicing factor u2af large subunit [Grosmannia clavigera kw1407]
Length = 420
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 36/298 (12%)
Query: 84 FVEMRTVEEASNAMALDGIIFEG--------VAVRVRRPTDYNPTLAAALGPGQPSPNLN 135
VE + +A+ A+AL+GI E + ++RP DY P
Sbjct: 1 MVEFKEPIDATVALALNGISMEAEDASGSGQSGLSIQRPKDYIVPAVVDYSVYHP----- 55
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
G+ S + + P ++ + +P Y ++ Q+ ELL SFG L F L+KDR T S+G
Sbjct: 56 ----GVVSNVV--IDTPFKIAITNIPSYLSDEQVTELLVSFGELRAFVLLKDRSTEESRG 109
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
FC Y +P TD+A LNG+ +GD+ L V++A+ Q +
Sbjct: 110 VAFCEYTEPQSTDVAIQGLNGMDLGDRKLRVQKASIGITQ-----------------VTS 152
Query: 256 MALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL 315
+ + + M+ L G +S +++V+ L +TA+ L ++++YE+I ED+ EEC K+G +
Sbjct: 153 VEMGVNAMSLLAGTISQEASDVSRVVQLLNMVTAEELVNNDDYEDICEDVTEECAKFGPV 212
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ + +PRP G +PGVGK+F+++ A AL+GRKF TV A Y+PE+ +
Sbjct: 213 MGLKVPRPASGGRHSPGVGKIFVKFDSRDSATKALKALAGRKFSDRTVVATYFPEENF 270
>gi|66808005|ref|XP_637725.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466159|gb|EAL64222.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 671
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 10/204 (4%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
+ +RR+YVG +PP ++ + FF+ + A N+ PG VV IN K FAF+E R+
Sbjct: 265 KQSRRIYVGNIPPGISDSELMEFFNAAVLAANLNTK-PGPPVVFCQINAPKCFAFIEFRS 323
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
EEA+NAM DGI + +++RRP DY T G P++ V
Sbjct: 324 PEEATNAMRFDGISLKNFTLKIRRPKDYQSTSDNTGGNASLLPSIVPTNV---------P 374
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ ++++VGGLP +E Q+K LL ++G L F+LVKD +TG SKG+ FC YQD VTD+
Sbjct: 375 DSENKIYVGGLPSNLSEEQVKSLLSAYGKLKAFNLVKDTNTGVSKGFAFCEYQDSEVTDV 434
Query: 210 ACAALNGLKMGDKTLTVRRATASS 233
AC+ LNG+ + DKTL V+RA+ S
Sbjct: 435 ACSKLNGIPLADKTLVVQRASIGS 458
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
V+ + + + + DD+EY+ IL D++EEC ++G + ++ +P P +N E V +V++E
Sbjct: 570 VIQILNLVDREDIFDDKEYDNILIDVKEECEQFGEVQSIWLPLPSKNPLE---VTRVYVE 626
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ A AL GRK+ G + + YYPED +F
Sbjct: 627 FSQVEFAQKACLALGGRKYNGRVLFSAYYPEDLFF 661
>gi|348681357|gb|EGZ21173.1| hypothetical protein PHYSODRAFT_488481 [Phytophthora sojae]
Length = 640
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 180/405 (44%), Gaps = 89/405 (21%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
A + AR +YVG LPP + F S ++ +G + PG+ ++N +I+ + FAF EM
Sbjct: 272 AQKPARELYVGNLPPNVTGPQLQEFLSTIIQQVGLTTQ-PGNPIINTWISTDGHFAFCEM 330
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPS---------------- 131
R+VEE + A+ L+ + G ++ RP + +GP QP
Sbjct: 331 RSVEECNLALLLNQLSLLGQPLKFGRPRSF-------MGPPQPMPQISARTQTALTNLGC 383
Query: 132 ------------PNLNLAAVG-------------------------LASGAIGGAEGPDR 154
P+L+ AA +AS + + R
Sbjct: 384 TPNPAWFAQPAVPSLDEAAAAPVGDSSTLAGATAAAVAAAQPAVPAVASTTVDASLSAHR 443
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
+ + +P TE Q+KEL+E FG L F LVKD TG S G Y+D +VT A L
Sbjct: 444 LIMSNIPVVLTEDQVKELVEPFGALKSFTLVKDTATGASMGSALFEYEDDSVTAQAVEGL 503
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFG 274
NGL +G L+V+ AS + Q A+ KMA
Sbjct: 504 NGLSIGGILLSVQCQPASGAALPAAPGATPNFEDQPSAVLKMA----------------- 546
Query: 275 ETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
++ D L DD+EY ++ ED+ EEC ++G + + IPRP ++G E PG+G
Sbjct: 547 ----------NMVSIDELRDDDEYADLAEDVEEECKRFGNVTGLEIPRP-KDGEEVPGLG 595
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
+++ + + A AL+GRKFGGN V Y+P DK+ +++S
Sbjct: 596 CIYVRFEEEKNAVDALKALNGRKFGGNIVKVTYFPLDKFDKQEFS 640
>gi|406699650|gb|EKD02849.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Trichosporon asahii var. asahii CBS 8904]
Length = 487
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 167/355 (47%), Gaps = 61/355 (17%)
Query: 31 HARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTV 90
+R+Y G+ NE + F++V+ +G + G+AV V IN EK + +VE +
Sbjct: 135 QKKRIYFAGVTDAMNENRLRKLFNKVLRDVGYD----GEAVSGVEINKEKDYVWVEFVSS 190
Query: 91 EEASNAMALDGIIFEGVAVRVRRPTDY---NPTLAAALGPGQPSPNLNLAAVGLASGAIG 147
+ A + F+G + +RP D+ +P L G P+
Sbjct: 191 DLAQVVFNKKDLDFDGAPIEPKRPKDFVGIDPALGFMGVSGDPN---------------- 234
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
+++FVGGLP ++KELL FG L F+LVK+ + SKG+ F + DPAVT
Sbjct: 235 -----NKLFVGGLPTTLGSDEVKELLTPFGELRTFNLVKEGNGSVSKGFAFVEFLDPAVT 289
Query: 208 DIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLG 267
DIA LNG ++GD+ L V+RA + + + S AQ +I + A + +
Sbjct: 290 DIAIQGLNGFQLGDRALVVQRAATTGRSASSTGVSGTAQFLAQSSILEKADEPA------ 343
Query: 268 GGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP---- 323
+V+ + + AD L DD++Y +ILED+R+EC K+G + V IPRP
Sbjct: 344 --------PATRVILMLNMVGADELYDDQDYADILEDIRDECSKFGEVEGVRIPRPVPKS 395
Query: 324 ---------------DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
++ + GVG+V++ Y D A AL GR+F G T+
Sbjct: 396 TKWEPSDSAAQTAEKNRRIDQENGVGRVYVMYADTESAVKAMRALGGRQFAGRTI 450
>gi|355727237|gb|AES09128.1| U2 small nuclear RNA auxiliary factor 2 [Mustela putorius furo]
Length = 301
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 119/189 (62%), Gaps = 10/189 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 123 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 181
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 182 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 234
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 235 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 292
Query: 200 VYQDPAVTD 208
Y D VTD
Sbjct: 293 EYVDINVTD 301
>gi|400602736|gb|EJP70338.1| splicing factor U2AF 65 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 576
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 191/383 (49%), Gaps = 50/383 (13%)
Query: 3 QNMLPFGATQLGAFPLMPV--QV----MTQQATRHARRVYVGGLPPLANEQAIATFFSQV 56
Q M P T+L AF P QV + +R A+R+ V LP + A+ FF+
Sbjct: 227 QQMDP---TKLQAFMNQPAGGQVSSAGLKASNSRQAKRLLVSNLPSGTTDDALVAFFNLQ 283
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE--GVAVRVRRP 114
+ + SA D ++++K FA +E + +A+ A+ALDGI E G + +RRP
Sbjct: 284 LNGLNVISAT--DPCALSQLSNDKSFAVLEFKNTSDATVALALDGISMEANGPGLSIRRP 341
Query: 115 TDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPD---RVFVGGLPYYFTETQIKE 171
DY + A P+ + + S ++ PD ++ + LP + TE Q+ E
Sbjct: 342 KDY--VMPAV-------PDDIMYNPDVVSDSV-----PDTIHKLSITNLPPFLTEEQVLE 387
Query: 172 LLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDP-AVTDIACAALNGLKMGDKTLTVRRAT 230
LL +FG F LVKDR T S+G F Y +P + + A AL+G+ +G K L + +A
Sbjct: 388 LLAAFGKPKAFVLVKDRTTEESRGIAFAEYAEPGSANEAALKALSGMDVGGKPLKITKAC 447
Query: 231 ASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITAD 290
Q I AI +A Q +G GE +VL L +TA+
Sbjct: 448 IGGTQVANFDAGI-------NAISNLAGQGNG-----------GEA-TRVLQLLNMVTAE 488
Query: 291 ALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAK 350
L D+++YEEI +D+R+EC KYG ++++ +PRP ++ GVG++F+++ +A
Sbjct: 489 ELLDNDDYEEICDDVRDECSKYGKILDLKVPRPAGGSRQSAGVGRIFVKFESVDATTSAL 548
Query: 351 NALSGRKFGGNTVNAFYYPEDKY 373
AL+GRKF TV Y+PE+ +
Sbjct: 549 KALAGRKFADRTVVTTYFPEENF 571
>gi|395529346|ref|XP_003766777.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Sarcophilus
harrisii]
Length = 462
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 122/199 (61%), Gaps = 10/199 (5%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 184 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 242
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P PG S N ++
Sbjct: 243 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL------PGM-SENPSVYVP 295
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 296 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 353
Query: 200 VYQDPAVTDIACAALNGLK 218
Y D VTD N ++
Sbjct: 354 EYVDINVTDQGSPRPNLIR 372
>gi|302916595|ref|XP_003052108.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
gi|256733047|gb|EEU46395.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 184/397 (46%), Gaps = 70/397 (17%)
Query: 2 AQNMLPFGATQLGAFPLMPVQVMTQ-----QATRHARRVYVGGLPPLANEQAIATFFSQV 56
A P ++L AF P +T +R ++R+ V +P +E+A+ +FF+
Sbjct: 189 APRQQPMDPSKLQAFMNQPGGQVTSAGLKANNSRQSKRLLVSKIPSGTSEEALISFFNLQ 248
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE----------- 105
+ G N D + ++++ FA +E R EA+ A+ALDG E
Sbjct: 249 LN--GLNVIDATDPCILCQFSNDRSFAVLEFREASEATVALALDGTSMEPDDANGASNGE 306
Query: 106 GVAVRVRRPTDY-----------NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDR 154
+ +RRP DY NP + + + P + ++
Sbjct: 307 SRGLEIRRPRDYVVPAVTEEVSYNPDVVSNIVP----------------------DTINK 344
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDP-AVTDIACAA 213
+ + +P + E Q+ ELL +FG F LVKDR T S+G F YQDP A A
Sbjct: 345 LCITNIPPFLAEDQVIELLAAFGKPKAFVLVKDRGTEESRGIAFAEYQDPNAANPTALDT 404
Query: 214 LNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLF 273
LNG+ +G K L V +A+ Q I AI +A QT+ N + G
Sbjct: 405 LNGMDVGGKKLKVTKASIGPTQVANFDVGI-------TAISGLASQTA--NDVEG----- 450
Query: 274 GETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGV 333
++VL L +TA+ L D+++YEEI ED++EEC K+G ++++ IPRP ++ GV
Sbjct: 451 ----SRVLQLLNMVTAEELLDNDDYEEICEDVKEECSKFGKIIDMKIPRPTGGSRQSAGV 506
Query: 334 GKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
GK+F++Y A AL+GRKF TV Y+PE
Sbjct: 507 GKIFVKYETIEDTTKALKALAGRKFADRTVVTTYFPE 543
>gi|322693990|gb|EFY85833.1| splicing factor, putative [Metarhizium acridum CQMa 102]
Length = 584
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 180/394 (45%), Gaps = 64/394 (16%)
Query: 2 AQNMLPFGATQLGAFPLMP-----VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQV 56
A P T+L AF P + +R A+R+ V +P +E+++ +FF+
Sbjct: 211 APRQQPMDPTKLQAFMKEPNGGVSSAGLKASNSRQAKRLIVSNIPQGNSEESLISFFNLQ 270
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG---------- 106
+ G N D + ++ FA +E R +A+ A+ALDGI E
Sbjct: 271 LN--GLNVIESSDPCNLCQFSTDRSFAVLEFRNAGDATVALALDGINMEADDTMNGDGGE 328
Query: 107 -VAVRVRRPTDYNPTLAAALGPGQP-----SPNLNLAAVGLASGAIGGAEGPDRVF---V 157
+ +RRP DY + P P PN+ V PD V +
Sbjct: 329 KQGLSIRRPKDY-------VMPAIPEEMAYDPNVVSNVV------------PDTVHKLSI 369
Query: 158 GGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDP-AVTDIACAALNG 216
+P + TE QI ELL +FG F LVKDR T S+G F Y +P + + A +ALNG
Sbjct: 370 TNIPTFLTEDQIIELLAAFGKPKAFVLVKDRSTEESRGIAFAEYLEPGSANEPALSALNG 429
Query: 217 LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGET 276
+ +G K L V +A+ Q I AI +A QTS G
Sbjct: 430 MDVGGKKLKVAKASIGPTQVANFDVGI-------TAISGLASQTSTDAEKG--------- 473
Query: 277 LAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKV 336
+VL L +T + L D EEYEEI ED+REEC K+G ++ + IPRP ++ GVGK+
Sbjct: 474 --RVLQLLNMVTPEELMDTEEYEEICEDVREECSKFGNILELKIPRPVGGSRQSAGVGKI 531
Query: 337 FLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
F+++ C A AL+GRKF TV Y+PE
Sbjct: 532 FVKFDTPDSCHKALTALAGRKFADRTVVTTYFPE 565
>gi|357017085|gb|AET50571.1| hypothetical protein [Eimeria tenella]
Length = 527
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 184/385 (47%), Gaps = 42/385 (10%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNS-------AGPGDAVVNVY 75
V ++ R ARR+++ +PP E I FF+ + A+ + A ++ V
Sbjct: 155 VTHSESDRIARRLFISNIPPGTTEADICGFFNGALLAVNAQTGYTDLSLASDKPQLLPVE 214
Query: 76 ----INHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP--GQ 129
+ + F+++R+ E + LDGI F +++V RP +Y + P G
Sbjct: 215 RCEGLQENSRHCFLDLRSHEWVVLCLKLDGITFNNNSLKVLRPKEY-------VQPPGGD 267
Query: 130 PSPNLNLAAVGLASGAIGG---AEGPDR-----VFVGGLPYYFTETQIKELLESFGTLHG 181
P+ +++ + + A P R +++ LP E Q+++LLE FG L
Sbjct: 268 PAKTVHIPELERGTKPQQNEVRATAPPRSADCKLYIQNLPPEMGEDQVRDLLEQFGKLRV 327
Query: 182 FDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQE 241
+L+K+R TG +GYGF Y+DP VTD A ALNG G L+V+R+ T+Q
Sbjct: 328 LNLIKNRQTGKHRGYGFFEYEDPEVTDQAIEALNGFVCGASVLSVQRSNFMPDLLPTKQH 387
Query: 242 SI----LAQAQQHIAIQK--MALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADD 295
+ L + + + +A+Q T+ GE ++V+ L I + + D
Sbjct: 388 TTEVTALPSSTSYAVLSDPVVAIQVRAGRTI-------GEKPSRVVQLLNTIYPEDIMTD 440
Query: 296 EEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSG 355
+E ++D R E KYG L V+IPRP+++ PGVGKVFL Y D A+ L+G
Sbjct: 441 SSHEAAVKDTRSEAEKYGPLEEVLIPRPNEDLSYKPGVGKVFLVYGDVTSARRAQYMLNG 500
Query: 356 RKFG-GNTVNAFYYPEDKYFNKDYS 379
R+F V A ++PE K+ + Y+
Sbjct: 501 RRFDQTRVVCAAFFPEQKFKDGQYT 525
>gi|84996015|ref|XP_952729.1| splicing factor [Theileria annulata strain Ankara]
gi|65303726|emb|CAI76103.1| splicing factor, putative [Theileria annulata]
Length = 380
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 176/365 (48%), Gaps = 46/365 (12%)
Query: 26 QQATRHARRVYVGGLPPLANEQAIATFFS-QVMTAIGGNSAGPGDAVVN---VYINHEKK 81
++A + +R+YVG LP Q + FF+ +M + GN+ P D +V +Y N ++
Sbjct: 49 EEARKRQKRLYVGNLPSGTKLQDVVDFFNGALMAMVPGNTMDPRDPLVTKTEIY-NPDQG 107
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
+ F+E +T E A LDGI G ++++RRP D+N
Sbjct: 108 YCFLEFKTPELADLGFKLDGITCNGYSLKIRRPLDFN----------------------- 144
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
+G +VFV +P TE ++K LLE G L +L+KD TG SKGYGF +
Sbjct: 145 ----LGANSDDTKVFVQNIPLDVTEDEMKALLEKHGKLKMANLLKDPATGVSKGYGFFEF 200
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRAT----ASSGQSKTEQESILAQA--QQHIAIQK 255
+D + +A LNG +G L+V+ A AS G+ + S L + Q ++
Sbjct: 201 EDARSSKLAVLHLNGSVLGKNVLSVKHAAFGYFASGGKPIDCKASNLPNSITQSILSNPL 260
Query: 256 MALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL 315
+ LQ +G S KV+ L + + L D Y EI+ ++EE KYG L
Sbjct: 261 LGLQLQNGRRIGSNPS-------KVIQLLNMVFHEDLISDYNYNEIVRLVKEEAQKYGPL 313
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN-TVNAFYYPEDKYF 374
VVIPRPD++ GVGKVF+ Y + + A+ +GR F N + + ++PED +
Sbjct: 314 QEVVIPRPDKDLTFKEGVGKVFIRYENLLSARKAQYMFNGRVFDKNRIICSAFFPEDLFI 373
Query: 375 NKDYS 379
+ Y+
Sbjct: 374 SGKYT 378
>gi|358391563|gb|EHK40967.1| hypothetical protein TRIATDRAFT_135674 [Trichoderma atroviride IMI
206040]
Length = 558
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 187/394 (47%), Gaps = 57/394 (14%)
Query: 2 AQNMLPFGATQLGAFPLMPVQVMTQ-----QATRHARRVYVGGLPPLANEQAIATFFSQV 56
A P T+L AF P +T +R A+R+ V +P A E A+ +FF+
Sbjct: 195 APRQQPMDPTKLQAFITQPGGQVTSAGLKASNSRQAKRLLVSNVPSGAGEDALISFFNLQ 254
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE----------G 106
+ G N D V + ++ FA +E R +A+ A+ALDGI E G
Sbjct: 255 LN--GLNVIESSDPCVLCQFSADRAFAVLEFRNASDATVALALDGISMEADDAMNGTADG 312
Query: 107 VA--VRVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVF---VGGL 160
V+ + +RRP DY P L + P P N+ PD V + +
Sbjct: 313 VSSGLNIRRPKDYVMPALPDEM-PFDPEVISNVV--------------PDTVHKLCITNI 357
Query: 161 PYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA-VTDIACAALNGLKM 219
P + TE Q+ ELL +FG F LVKD+ T S+G F Y +P+ + A +LNG+ +
Sbjct: 358 PSFLTEEQVIELLAAFGKPKAFVLVKDQSTEESRGIAFTEYLEPSSANEPALNSLNGMDV 417
Query: 220 GDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAK 279
G K L V +A+ Q I AI +A QTS N + +
Sbjct: 418 GGKKLKVTKASIGPTQVANFDVGI-------TAISGLASQTS--NDI---------ERSS 459
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
V+ L +T + L D+++YEEI ED+++EC K+G +V + +PRP ++ GVGK++++
Sbjct: 460 VIQLLNMVTPEELIDNDDYEEICEDVQDECAKFGKVVELKVPRPSGGSRQSAGVGKIYVK 519
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y A AL+GRKF TV A Y+PE+ +
Sbjct: 520 YDSEESATKALTALAGRKFADRTVVATYFPEENF 553
>gi|397633851|gb|EJK71162.1| hypothetical protein THAOC_07424, partial [Thalassiosira oceanica]
Length = 449
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 132/221 (59%), Gaps = 21/221 (9%)
Query: 24 MTQQATRHARRVYVGGLPPLANEQAIATFF------SQVMTAIGGNSAG------PGDAV 71
M TRHARR+Y+G +P ++ E I +FF S +M N A D +
Sbjct: 230 MNPNQTRHARRLYIGNIPDIS-ETEIHSFFRKTIEKSLIMNRDDKNYAQLQEEYIANDPI 288
Query: 72 VNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVA-VRVRRPTDYNPTLAAALGPGQP 130
V+VYIN E++FAF+E RT++ + ++LDGI EG V+V+RP DYN +LA G
Sbjct: 289 VSVYINRERRFAFIEFRTMDITTACLSLDGIDVEGRGKVKVKRPNDYNASLAPQTSNGV- 347
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+L+ A +GL S + +GP+++F+GGLPY+ TE+Q+ ELL +FG++ F LVK +
Sbjct: 348 --SLDTAKLGLVSSTV--PDGPNKIFIGGLPYHLTESQVLELLGAFGSVRAFHLVKSEPS 403
Query: 191 G-NSKGYGFCVYQDPAVTDIACAALNGLKM-GDKTLTVRRA 229
SKGY F Y DP +T +AC LNG+ + G K L+ R A
Sbjct: 404 ATTSKGYCFVEYADPNITQVACMGLNGMDLGGGKQLSCRMA 444
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 175/387 (45%), Gaps = 78/387 (20%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
A + AR +YVG LPP + F S ++ +G + PG+ ++N + + + FAF EM
Sbjct: 242 AQKPARELYVGNLPPNVTGPQLQEFLSTIIQQVGLTTQ-PGNPIINTWTSTDGHFAFCEM 300
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNL---------NLAA 138
R+VEE + A+ L+ + G ++ RP + +GP QP P + NL
Sbjct: 301 RSVEECNLALLLNQLSLLGQPLKFGRPRSF-------MGPPQPMPQVSARTQTALTNLGC 353
Query: 139 V-----------------------------GLASGAIGGAEGP---DRVFVGGLPYYFTE 166
+A+ G+E +R+ + +P E
Sbjct: 354 TPNPAWFAQHTVSSTETTTTETTLAEATLSAIAAAQPAGSEAVSSGNRLIMSNIPVVLAE 413
Query: 167 TQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV 226
Q+KEL+E FG L F LVKD TG S G Y+D V A LNGL +G L+V
Sbjct: 414 EQVKELVEPFGKLKSFTLVKDSATGASLGSALFEYEDSDVAAQAVEGLNGLSIGGILLSV 473
Query: 227 RRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEA 286
+R ASS + + + Q + VL +
Sbjct: 474 QRQPASSAAALPSAAAANPEDQP----------------------------SAVLKMANM 505
Query: 287 ITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGC 346
++ D L DDEEY ++ ED+ EEC ++G + + IPRP ++G E PG+G +++ +
Sbjct: 506 VSIDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRP-KDGEEVPGLGCIYVRFGKEEDA 564
Query: 347 ATAKNALSGRKFGGNTVNAFYYPEDKY 373
+A AL+GRKFGGN V Y+P DK+
Sbjct: 565 VSALKALNGRKFGGNIVKVTYFPVDKF 591
>gi|358378060|gb|EHK15743.1| hypothetical protein TRIVIDRAFT_79964 [Trichoderma virens Gv29-8]
Length = 503
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 183/389 (47%), Gaps = 57/389 (14%)
Query: 7 PFGATQLGAFPLMPVQVMTQ-----QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIG 61
P T+L AF P +T +R A+R+ V +P + A+ +FF+ + G
Sbjct: 145 PMDPTKLQAFMTQPGGQVTSAGLKASNSRQAKRLLVSNVPSSVTDDALISFFNLQLN--G 202
Query: 62 GNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE------GVA------V 109
N D V + +K FA +E R +A+ A+ALDGI E G A +
Sbjct: 203 LNVIDSSDPCVLSQFSQDKAFAVLEFRNASDATVALALDGITMEADDAQNGTANGGNHGL 262
Query: 110 RVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVF---VGGLPYYFT 165
+RRP DY P L + P P N+ PD V + +P +
Sbjct: 263 VIRRPKDYVMPALPDEM-PYDPEVISNVV--------------PDTVHKLCITNIPSFLN 307
Query: 166 ETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV-TDIACAALNGLKMGDKTL 224
E Q+ ELL +FG F LVKDR T S+G F Y +P+ + A +LNG+ +G K L
Sbjct: 308 EDQVIELLAAFGKPKAFVLVKDRSTEESRGIAFTEYLEPSTANEPALNSLNGMDVGGKKL 367
Query: 225 TVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLT 284
V +A+ Q I AI +A QTS N + + V+ L
Sbjct: 368 KVTKASIGPTQVANFDVGI-------TAISGLASQTS--NDI---------ERSSVIQLL 409
Query: 285 EAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAV 344
+T + L D+++YEEI ED+++EC K+G +V + +PRP ++ GVGK+++++
Sbjct: 410 NMVTPEELMDNDDYEEICEDVQDECSKFGKVVELKVPRPSGGSRQSTGVGKIYVKFDSEE 469
Query: 345 GCATAKNALSGRKFGGNTVNAFYYPEDKY 373
A AL+GRKF TV + Y+PE+ +
Sbjct: 470 SATKALTALAGRKFADRTVVSTYFPEENF 498
>gi|425773483|gb|EKV11835.1| Splicing factor u2af large subunit [Penicillium digitatum Pd1]
Length = 585
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 167/349 (47%), Gaps = 52/349 (14%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R++V +P + A+ FF+ + G N D ++ ++ +K FA +E +
Sbjct: 270 SRQSKRLFVYNIPSGVSGDAVIAFFNLQLN--GLNVVHSVDPCISAQVSEDKTFALLEFK 327
Query: 89 TVEEASNAMALDGIIFE---GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGA 145
+A+ A+A DGI + VRRP DY +A P Q LN
Sbjct: 328 DPNDATVALAFDGITMAESGDKGLEVRRPKDYIVPDGSASQPVQAGVVLNEVP------- 380
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ P+++ + +P Y E I LL+SFG L F LVKD T S+G F Y DP
Sbjct: 381 ----DSPNKICISNIPTYINEEAIIMLLKSFGDLKSFVLVKDAATEESRGIAFYEYVDPN 436
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
T +A LNG+++ D+ L RA+ + Q+ SG++
Sbjct: 437 NTALAVEGLNGMELVDRHLKFVRASIGTTQA------------------------SGLDM 472
Query: 266 LGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
M +F +T + +VL L +T D L +DE+YEEI+ED+ +EC K+GT++ +
Sbjct: 473 GVNAMQMFAKTTSQDLETTQVLQLLNMVTLDELLNDEDYEEIMEDVSDECSKFGTILGIK 532
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYY 368
IPR G GK+F++Y A A AL+GRKF TV A Y+
Sbjct: 533 IPRRGH------GAGKIFIKYDAAESATNALKALAGRKFSDRTVVASYF 575
>gi|425775779|gb|EKV14031.1| Splicing factor u2af large subunit [Penicillium digitatum PHI26]
Length = 585
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 167/349 (47%), Gaps = 52/349 (14%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ++R++V +P + A+ FF+ + G N D ++ ++ +K FA +E +
Sbjct: 270 SRQSKRLFVYNIPSGVSGDAVIAFFNLQLN--GLNVVHSVDPCISAQVSEDKTFALLEFK 327
Query: 89 TVEEASNAMALDGIIFE---GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGA 145
+A+ A+A DGI + VRRP DY +A P Q LN
Sbjct: 328 DPNDATVALAFDGITMAESGDKGLEVRRPKDYIVPDGSASQPVQAGVVLNEVP------- 380
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ P+++ + +P Y E I LL+SFG L F LVKD T S+G F Y DP
Sbjct: 381 ----DSPNKICISNIPTYINEEAIIMLLKSFGDLKSFVLVKDAATEESRGIAFYEYVDPN 436
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
T +A LNG+++ D+ L RA+ + Q+ SG++
Sbjct: 437 NTALAVEGLNGMELVDRHLKFVRASIGTTQA------------------------SGLDM 472
Query: 266 LGGGMSLFGETLA------KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
M +F +T + +VL L +T D L +DE+YEEI+ED+ +EC K+GT++ +
Sbjct: 473 GVNAMQMFAKTTSQDLETTQVLQLLNMVTLDELLNDEDYEEIMEDVSDECSKFGTILGIK 532
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYY 368
IPR G GK+F++Y A A AL+GRKF TV A Y+
Sbjct: 533 IPRRGH------GAGKIFIKYDAAESATNALKALAGRKFSDRTVVASYF 575
>gi|401402634|ref|XP_003881297.1| rna recognition motif (RRM)-containing protein,related [Neospora
caninum Liverpool]
gi|325115709|emb|CBZ51264.1| rna recognition motif (RRM)-containing protein,related [Neospora
caninum Liverpool]
Length = 555
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 23/214 (10%)
Query: 38 GGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAM 97
G LP + + +F++++ ++ PGD +V+VY+N ++FAF+E R++EEA+ +
Sbjct: 16 GNLPVPVTQGEVQQYFNELLNSLLPQKV-PGDTIVHVYVNPARRFAFLEHRSIEEANFTL 74
Query: 98 ALDGIIFEGVAVRVRRPTDYNPTLA--------AALG---------PGQPSPNLNLAAVG 140
LDG+ + A+ +RRP DYNPTLA A LG P Q + A
Sbjct: 75 GLDGVSWRNCALSLRRPQDYNPTLADQQYREERARLGSMTGFAVPPPSQAATPAAPAESS 134
Query: 141 LASGAIG-----GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
L +GA+G + P ++F+GGLP+ TE K+LLE+FG L +VKD+ G+ KG
Sbjct: 135 LIAGALGIVSTTVPDSPHKIFIGGLPHSITEQGCKQLLEAFGQLRALHVVKDQQRGDCKG 194
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRA 229
+ FC Y DP VTD+A A LN +++ D+ L VRRA
Sbjct: 195 FAFCEYLDPNVTDVAVAGLNNMRIADRVLQVRRA 228
>gi|46125343|ref|XP_387225.1| hypothetical protein FG07049.1 [Gibberella zeae PH-1]
Length = 564
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 178/375 (47%), Gaps = 54/375 (14%)
Query: 2 AQNMLPFGATQLGAFPLMPVQVMTQQA-----TRHARRVYVGGLPPLANEQAIATFFSQV 56
A P ++L AF P +T + +R ++R+ V +PP +E A+ FF+
Sbjct: 192 APRQQPMDPSKLQAFMNQPGGQVTSASLKASNSRQSKRLLVSRIPPGTSEDALIAFFNLQ 251
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG---------- 106
+ G N D V ++++ FA +E + E + A+ALDGI E
Sbjct: 252 LN--GLNVIDTTDPCVLCQFSNDRSFAVIEFKDAPETTVALALDGISMEANDASNGADGG 309
Query: 107 -VAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPD---RVFVGGLPY 162
+ +RRP DY + A P + V PD ++ + +P
Sbjct: 310 HRGLEIRRPRDY--VVPAVTEDVAYDPEVVSNVV------------PDTVNKLSITNIPP 355
Query: 163 YFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD-IACAALNGLKMGD 221
+ TE QI ELL SFG F LVKDR T S+G F YQDPAV++ A LNG+ +G
Sbjct: 356 FLTEEQIIELLASFGKPKAFVLVKDRGTEESRGIAFAEYQDPAVSNPTALDTLNGMDIGG 415
Query: 222 KTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVL 281
K + V +A+ Q I AI +A QT+ N + ++VL
Sbjct: 416 KQIKVSKASIGPTQVANFDVGI-------TAISGLASQTA--NEVES---------SRVL 457
Query: 282 CLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYY 341
L +TA+ L D+++YEEI ED+REEC KYG +++V +PRP ++ GVGK+F++Y
Sbjct: 458 QLLNMVTAEELLDNDDYEEICEDVREECSKYGKILDVKVPRPTGGSRQSAGVGKIFVKYE 517
Query: 342 DAVGCATAKNALSGR 356
A AL+GR
Sbjct: 518 HTEDTTKALQALAGR 532
>gi|346324367|gb|EGX93964.1| splicing factor u2af large subunit [Cordyceps militaris CM01]
Length = 583
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 41/351 (11%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
+R ARR+ V +P E A+ FF+ + + N D ++++K FA +E +
Sbjct: 263 SRQARRLLVSDIPSGTTEDALVAFFNLQLNGL--NVIEATDPCALCQLSNDKSFAVLEFK 320
Query: 89 TVEEASNAMALDG--IIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+A+ A+ALDG ++ + + +RRP DY + A P+ + + S ++
Sbjct: 321 NTGDATVALALDGSSMVADTPGLSIRRPKDY--VMPAV-------PDEIIFNPEVVSNSV 371
Query: 147 GGAEGPD---RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
PD ++ + +P + TE Q+ ELL +FG F LVK+R T S+G F Y +
Sbjct: 372 -----PDTIHKLCITNIPPFLTEDQVLELLAAFGKPKAFVLVKERSTEESRGIAFAEYVE 426
Query: 204 PA-VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
P + A LNG+ +G K L R+A Q I AI +A Q +G
Sbjct: 427 PTNANEPALNTLNGMDVGGKKLKARKACVGGTQVANFDAGI-------NAISNLAGQGNG 479
Query: 263 MNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPR 322
+ +VL L +TA+ L D+++YEEI ED+R+EC KYG +++V +PR
Sbjct: 480 GDA------------TRVLQLLNMVTAEELLDNDDYEEICEDVRDECSKYGKVLDVKVPR 527
Query: 323 PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
P ++ GVG++F+++ A AL+GRKF TV Y+PE+ +
Sbjct: 528 PAGGSRQSAGVGRIFVKFESVDSTTGALKALAGRKFADRTVVTTYFPEENF 578
>gi|325179530|emb|CCA13927.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 833
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 181/403 (44%), Gaps = 87/403 (21%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
A + AR +YVG LP + F ++ +G S PG+ +++V+I+ + FAF EM
Sbjct: 467 AMKPARELYVGNLPATITGPQLQEFLGTIIQQVGL-STQPGNPILSVWISTDGHFAFCEM 525
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP-----------NL-- 134
R+VEE + A+ L+ + G ++ RP + +GP QP P NL
Sbjct: 526 RSVEECNLALLLNQLPLLGQPLKFGRPRSF-------MGPPQPMPIVSARTQTALVNLGC 578
Query: 135 ------------------------------------NLAAVGLASGAIGGAEGPD--RVF 156
++A LA P+ ++
Sbjct: 579 TPNPVWFASPDVTSFGSDPMGFGNGLNGFLSSSSSSLMSATALADSLASLPSDPNATQLL 638
Query: 157 VGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNG 216
+ +P E Q+KEL++ FG L F L+KD TG S G F YQ+ VT A L+G
Sbjct: 639 MSNIPGVLAEEQVKELVQPFGELRFFKLIKDPITGQSTGTAFFEYQENQVTTEALNGLDG 698
Query: 217 LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGET 276
L +G L+VRRA ++ K Q ++L + G GE
Sbjct: 699 LDIGGVKLSVRRAPDAT---KYPQIAVL---------------------MPGAA---GEE 731
Query: 277 LAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKV 336
VL + ++ D L +DEE+ ++ ED+ EEC ++GT++ + IPR Q+G E G G +
Sbjct: 732 PGPVLRMANMVSEDELKNDEEFADLKEDVEEECKRFGTIIALDIPR-SQDGEEIAGTGNI 790
Query: 337 FLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
F+ Y D A+ AL GRKFGGN V Y+ K+ K+YS
Sbjct: 791 FVRYSDTKEATAAQKALCGRKFGGNVVKVTYFSLSKFEAKEYS 833
>gi|403224363|dbj|BAM42493.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 377
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 170/362 (46%), Gaps = 41/362 (11%)
Query: 26 QQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN---VYINHEKKF 82
++ + +R+Y+G LP + FF+ + A+ ++ D +V+ +Y N E+ +
Sbjct: 47 EENKKRQKRLYIGNLPAGMKLGDVVEFFNGALLAMVPSNQTTKDPLVSKTEIY-NPEQGY 105
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
F+E +T E A LDGI G ++++RRP D+
Sbjct: 106 CFLEFKTPELTDLAFKLDGITCNGYSLKIRRPIDFTQ----------------------- 142
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
G ++F+ + TE +++ELLE G L F+L+KD TG SKGYGF Y+
Sbjct: 143 ----GNQLEDTKIFIQNVATDVTEAELRELLEKHGKLKLFNLIKDPITGASKGYGFFEYE 198
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRAT----ASSGQSKTEQESILAQAQQHIAIQKMAL 258
D +A LNG + L+V+ A AS G+ + S L + + L
Sbjct: 199 DSRSAKMAVLHLNGQALKQNVLSVKHAAFGYFASGGKPIDCKASNLPNSITQSILNNPLL 258
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNV 318
N+ + G +V+ L + ++ L D Y EI+ +EE GKYG L +
Sbjct: 259 GLQLQNS-----KIVGAKPTRVVQLLNMVFSEDLLSDYNYNEIVRLTKEEAGKYGALDEI 313
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN-TVNAFYYPEDKYFNKD 377
V+PRP ++ GVGKVFL+Y + + A++ +GR F N V A +YPEDKY +
Sbjct: 314 VVPRPSKDLTFKSGVGKVFLKYKEVLHARKAQHMFNGRIFDKNRVVCAAFYPEDKYSRGE 373
Query: 378 YS 379
Y+
Sbjct: 374 YT 375
>gi|156085070|ref|XP_001610018.1| RNA recognition motif (RRM)-containing protein [Babesia bovis]
gi|154797270|gb|EDO06450.1| RNA recognition motif (RRM)-containing protein [Babesia bovis]
Length = 383
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 170/361 (47%), Gaps = 47/361 (13%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAG----PGDAVVNVYINHEKKFAFV 85
RH RR+Y+G LP +A+ F S + +S P + ++ N ++ + F+
Sbjct: 57 RH-RRLYIGNLPSGTTYKALVEFLSAALRLPNDDSGQTVQVPHISKTEIF-NEDQGYCFL 114
Query: 86 EMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGA 145
E T E A LDGI F+G +++RRP DY T ++
Sbjct: 115 EFSTPELADACFKLDGINFKGKLLKIRRPIDYGTTSSSE--------------------- 153
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+VFV +P +E ++KELLE G + +LVKD TG +KGYGF + D
Sbjct: 154 ------DTKVFVQNIPPTMSEAEVKELLEKHGKIKSSNLVKDLKTGQNKGYGFFEFDDSR 207
Query: 206 VTDIACAALNGLKMGDKTLTVRRAT----ASSGQSKTEQESILAQA--QQHIAIQKMALQ 259
+A LNG +G L+V+ A A+ G+ + + L + Q ++ + LQ
Sbjct: 208 AAKMAVCHLNGHIIGKNVLSVKHAAFSYFAAGGKLTDCKATNLPNSVTQSILSNPLLGLQ 267
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+G S +++ L + + L D+ Y E+ + + EE KYG L ++V
Sbjct: 268 MQSGRRIGSKPS-------RIVQLINIVFHEDLIQDKRYHEVKDAIMEEAKKYGHLEDIV 320
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN-TVNAFYYPEDKYFNKDY 378
IPRP+ + GVGKVFL++ D + A+ L+GR F GN V A ++P D++ Y
Sbjct: 321 IPRPNDDLSYKEGVGKVFLKFGDEISSRRAQYMLNGRVFDGNRIVCAAFFPLDRFLKGKY 380
Query: 379 S 379
+
Sbjct: 381 T 381
>gi|167395950|ref|XP_001741817.1| hexokinase [Entamoeba dispar SAW760]
gi|165893477|gb|EDR21726.1| hexokinase, putative [Entamoeba dispar SAW760]
Length = 974
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 185/383 (48%), Gaps = 57/383 (14%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA---IGGNSAGPGDAVVNVYINH 78
Q + R A+R+YVG + +E+ I F++ M + N P D + ++ +N+
Sbjct: 349 QQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKND--PRDIITHIEVNY 406
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT------LAAALGPGQPSP 132
E+ +AF+E RT+EEA A++LDG+ +G +V+VRRP DYNP L+ + PG +P
Sbjct: 407 ERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPVLPFISGLSQLMEPGTTNP 466
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
++ +++G +P T+ QI++ LE+ L F +++D D G
Sbjct: 467 RESI------------------LYMGNIPLQMTDEQIRKKLENLNPLKKFFVIRDPDLGA 508
Query: 193 SKGYGFCV--YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
+G +C+ YQ+P + +G+ +G + V SG + L +A +
Sbjct: 509 PQGKCYCLFEYQNPEYKE-KILTFDGINLGGNKIEV-----CSGVDGFKH---LPKASLN 559
Query: 251 IAIQKMALQTSG------MNTLGGGMSLFGETL-----------AKVLCLTEAITADALA 293
KM T+ +N+ G ++F + L ++++ + + + L
Sbjct: 560 ELFSKMFPHTTDLVIGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIVIFNMVYPEDLI 619
Query: 294 DDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNAL 353
D + Y E+++D+R C +YG + ++ IPRP + + G+G+VF+E+ G +
Sbjct: 620 DQQRYIELIDDIRFVCQEYGEVESISIPRPTEENKKPSGLGRVFIEFKTIDGAIRCWKEI 679
Query: 354 SGRKFGGNTVNAFYYPEDKYFNK 376
+++ ++ +Y E KY N+
Sbjct: 680 VKKRYDNRSLLVGFYSEKKYANR 702
>gi|440290938|gb|ELP84237.1| splicing factor u2af large subunit, putative [Entamoeba invadens
IP1]
Length = 623
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 177/396 (44%), Gaps = 36/396 (9%)
Query: 4 NMLPFGATQLGAFPLMPV---QVMTQQATRH----ARRVYVGGLPPLANEQAIATFFSQV 56
++ P G + PV ++ QQ H +RRVYVG + EQ I F+
Sbjct: 88 SLSPLGKKIKSRWDEQPVADASLLQQQLNVHQEKGSRRVYVGNINTTTTEQDIVEAFNDA 147
Query: 57 MTA---IGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRR 113
M + N D +V+ +N+EK +AF+E RT ++A A++LDG+ +G +V+VRR
Sbjct: 148 MRRGDYVDKNDKS--DIIVSTEVNYEKSYAFIEFRTFDQAVKALSLDGLTIKGASVKVRR 205
Query: 114 PTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELL 173
P D+NP L Q L VG G +++G +P ++ QI++ L
Sbjct: 206 PKDFNPVLPFISSLSQ------LMEVGTTKPRDGV------MYMGNIPLQMSDEQIQKKL 253
Query: 174 ESFGTLHGFDLVKDRDTGNSKGYGFCV--YQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
E+ L + +V+D G +G +C+ YQ+P D A NG+ +G + V
Sbjct: 254 ENLNPLKKYVVVRDPSLGAPQGKCYCLFEYQNPEYKD-KVLAFNGIILGGDKIEVCSGLE 312
Query: 232 SSGQSKTE--QESILAQAQQHIAIQKMALQTSGM-------NTLGGGMSLFGETLAKVLC 282
T E + Q I L S + L L +V+
Sbjct: 313 GFKHFPTAALNELCMKMFPQRTDIITATLLNSSVGYSDVFERVLHNSEDLSQYECTRVIV 372
Query: 283 LTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYD 342
L + L +++ Y E+++D+RE C YG ++++ IPRP + G+G+ F+E+ D
Sbjct: 373 LFNMFFPEDLNNEQRYIELVDDIREACIAYGEVISISIPRPTETNKRPSGIGRAFVEFKD 432
Query: 343 AVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
T + R++ + A +Y E KY ++ +
Sbjct: 433 VEMAKTCWREIVKRRYDNRQIVAGFYSESKYNSRSF 468
>gi|407043289|gb|EKE41863.1| U2 snRNP auxiliary factor large subunit, putative [Entamoeba
nuttalli P19]
Length = 628
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 184/383 (48%), Gaps = 57/383 (14%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA---IGGNSAGPGDAVVNVYINH 78
Q + R A+R+YVG + +E+ I F++ M + N D + ++ +N+
Sbjct: 131 QQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKNDTR--DIITHIEVNY 188
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT------LAAALGPGQPSP 132
E+ +AF+E RT+EEA A++LDG+ +G +V+VRRP DYNP L+ + PG +P
Sbjct: 189 ERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPVLPFISGLSQLMEPGTTNP 248
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
++ +++G +P T+ QI++ LE+ L F +++D D G
Sbjct: 249 RESI------------------LYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGA 290
Query: 193 SKGYGFCV--YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
+G +C+ YQ+P + +G+ +G + V SG + L +A +
Sbjct: 291 PQGKCYCLFEYQNPEYKE-KILTFDGINLGGNKIEV-----CSGVDGFKH---LPKASLN 341
Query: 251 IAIQKMALQTSG------MNTLGGGMSLFGETL-----------AKVLCLTEAITADALA 293
KM T+ +N+ G ++F + L ++++ + + + L
Sbjct: 342 ELFSKMFPHTTDLVIGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLT 401
Query: 294 DDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNAL 353
D + Y E+++D+R C +YG + ++ IPRP + + G+G+VF+E+ G +
Sbjct: 402 DQQRYIELIDDIRFVCQEYGEVESISIPRPTEENKKPSGLGRVFIEFKTIEGAIKCWKEI 461
Query: 354 SGRKFGGNTVNAFYYPEDKYFNK 376
+++ ++ +Y E KY N+
Sbjct: 462 IKKRYDNRSLLVGFYSEKKYANR 484
>gi|67475980|ref|XP_653619.1| U2 snRNP auxiliary factor large subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56470591|gb|EAL48233.1| U2 snRNP auxiliary factor large subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 712
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 184/383 (48%), Gaps = 57/383 (14%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA---IGGNSAGPGDAVVNVYINH 78
Q + R A+R+YVG + +E+ I F++ M + N D + ++ +N+
Sbjct: 131 QQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKNDTR--DIITHIEVNY 188
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT------LAAALGPGQPSP 132
E+ +AF+E RT+EEA A++LDG+ +G +V+VRRP DYNP L+ + PG +P
Sbjct: 189 ERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPVLPFISGLSQLMEPGTTNP 248
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
++ +++G +P T+ QI++ LE+ L F +++D D G
Sbjct: 249 RESI------------------LYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGA 290
Query: 193 SKGYGFCV--YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
+G +C+ YQ+P + +G+ +G + V SG + L +A +
Sbjct: 291 PQGKCYCLFEYQNPEYKE-KILTFDGINLGGNKIEV-----CSGVDGFKH---LPKASLN 341
Query: 251 IAIQKMALQTSG------MNTLGGGMSLFGETL-----------AKVLCLTEAITADALA 293
KM T+ +N+ G ++F + L ++++ + + + L
Sbjct: 342 ELFSKMFPHTTDLVIGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLT 401
Query: 294 DDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNAL 353
D + Y E+++D+R C +YG + ++ IPRP + + G+G+VF+E+ G +
Sbjct: 402 DQQRYIELIDDIRFVCQEYGEVESISIPRPTEENKKPSGLGRVFIEFKTIEGAIKCWKEI 461
Query: 354 SGRKFGGNTVNAFYYPEDKYFNK 376
+++ ++ +Y E KY N+
Sbjct: 462 IKKRYDNRSLLVGFYSEKKYANR 484
>gi|449707077|gb|EMD46798.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 712
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 184/383 (48%), Gaps = 57/383 (14%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTA---IGGNSAGPGDAVVNVYINH 78
Q + R A+R+YVG + +E+ I F++ M + N D + ++ +N+
Sbjct: 131 QQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKNDTR--DIITHIEVNY 188
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT------LAAALGPGQPSP 132
E+ +AF+E RT+EEA A++LDG+ +G +V+VRRP DYNP L+ + PG +P
Sbjct: 189 ERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPVLPFISGLSQLMEPGTTNP 248
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
++ +++G +P T+ QI++ LE+ L F +++D D G
Sbjct: 249 RESI------------------LYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGA 290
Query: 193 SKGYGFCV--YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
+G +C+ YQ+P + +G+ +G + V SG + L +A +
Sbjct: 291 PQGKCYCLFEYQNPEYKE-KILTFDGINLGGNKIEV-----CSGVDGFKH---LPKASLN 341
Query: 251 IAIQKMALQTSG------MNTLGGGMSLFGETL-----------AKVLCLTEAITADALA 293
KM T+ +N+ G ++F + L ++++ + + + L
Sbjct: 342 ELFSKMFPHTTDLVIGTLLNSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLT 401
Query: 294 DDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNAL 353
D + Y E+++D+R C +YG + ++ IPRP + + G+G+VF+E+ G +
Sbjct: 402 DQQRYIELIDDIRFVCQEYGEVESISIPRPTEENKKPSGLGRVFIEFKTIEGAIKCWKEI 461
Query: 354 SGRKFGGNTVNAFYYPEDKYFNK 376
+++ ++ +Y E KY N+
Sbjct: 462 IKKRYDNRSLLVGFYSEKKYANR 484
>gi|330931856|ref|XP_003303563.1| hypothetical protein PTT_15819 [Pyrenophora teres f. teres 0-1]
gi|311320368|gb|EFQ88342.1| hypothetical protein PTT_15819 [Pyrenophora teres f. teres 0-1]
Length = 578
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 172/352 (48%), Gaps = 40/352 (11%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
+ ++R+YV LP Q I FF+ + + N D ++ +I K++A +E +
Sbjct: 254 KQSKRLYVHNLPSGCTSQEIMEFFNNQLNGL--NVVSGNDPCLSAHIATSKEYAALEFKA 311
Query: 90 VEEASNAMALDGIIF--EGVA-----VRVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGL 141
E+A+ A+A++GI EG A + +RRP DY PT P P +++V
Sbjct: 312 PEDATLALAMNGISMRDEGGAPDRSGLSIRRPKDYITPTADENAYP----PGDEVSSVV- 366
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
+ P+++ + +P Y E QI+EL+E+ G L F LVKD T +G FC Y
Sbjct: 367 -------KDSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTGTDQHRGIAFCEY 419
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D + D LN + +GD L V RAT QS + A
Sbjct: 420 ADNEIIDAVIEGLNDIPLGDGNLKVSRATVGLQQSTGLDGGVGA---------------- 463
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
++ L G + ++V+CL +T+D L +D+EYEEI ED+ EECGKYG +V IP
Sbjct: 464 -ISMLAGASAAENHEHSRVVCLMNMVTSDELLNDDEYEEIKEDIEEECGKYGPIVETKIP 522
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
RP GVGK++++Y D A AL+GR+F TV A + E+ +
Sbjct: 523 RP-AGARVNLGVGKIYIKYQDTESAQKAIKALAGRQFSRRTVVATEFSEEGF 573
>gi|340520531|gb|EGR50767.1| predicted protein [Trichoderma reesei QM6a]
Length = 539
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 179/380 (47%), Gaps = 57/380 (15%)
Query: 2 AQNMLPFGATQLGAFPLMPV-QV----MTQQATRHARRVYVGGLPPLANEQAIATFFSQV 56
A P T+L AF P QV + +R A+R+ V +P E+A+ FF+
Sbjct: 193 APRQQPMDPTKLQAFMTQPGGQVSSAGLKASNSRQAKRLLVYNVPSGVTEEALIAFFNLQ 252
Query: 57 MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE------GVA-- 108
+ G N D V + +K FA VE R +A+ A+ALDGI E G A
Sbjct: 253 LN--GLNVIETPDPCVLCQFSSDKTFAVVEFRNASDATVALALDGITMEADDAQNGTANG 310
Query: 109 ----VRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVF---VGGLP 161
+ +RRP DY + PG P + I PD V + +P
Sbjct: 311 GSHGLDIRRPKDY-------VMPGIPD------DIPYDPEVISNVV-PDTVHKLCITNIP 356
Query: 162 YYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA-VTDIACAALNGLKMG 220
+ E QI ELL +FG F LVKDR T S+G F Y DP+ + A +LNG+ +
Sbjct: 357 TFLNEEQIIELLAAFGKPKSFVLVKDRSTEESRGIAFTEYLDPSSANEPALNSLNGMDVA 416
Query: 221 DKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKV 280
K L V +A+ Q I AI +A QTS N + + V
Sbjct: 417 GKKLKVTKASIGPTQVANFDVGI-------TAISGLASQTS--NDI---------ERSSV 458
Query: 281 LCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEY 340
+ L +T + L D+++YEEI ED+++EC K+G +V + +PRP ++ GVGK+F++
Sbjct: 459 IQLLNMVTPEELLDNDDYEEICEDVQDECSKFGKVVELKVPRPTGGSRQSAGVGKIFVK- 517
Query: 341 YDAVGCAT-AKNALSGRKFG 359
+D+V AT A AL+GRKF
Sbjct: 518 FDSVESATKALTALAGRKFA 537
>gi|452001453|gb|EMD93912.1| hypothetical protein COCHEDRAFT_1020092 [Cochliobolus
heterostrophus C5]
Length = 352
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 177/359 (49%), Gaps = 54/359 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
+ ++R+YV LP Q I FF+ + + S GP D V+ +I K++A +E +
Sbjct: 28 KQSKRLYVHNLPSGCTSQEIMEFFNTQLNGLNVVS-GP-DPCVSAHIATSKEYAALEFKA 85
Query: 90 VEEASNAMALDGIIF-------EGVAVRVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGL 141
E+A+ A+A++GI + + +RRP DY PT P P +++V
Sbjct: 86 PEDATLALAMNGISMRDDGGAPDRAGLSIRRPKDYITPTADENAYP----PGDEVSSVV- 140
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
+ P+++ + +P Y E QI+EL+E+ G L F LVKD T +G FC Y
Sbjct: 141 -------KDSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTSTDQHRGIAFCEY 193
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D + D LN + +GD L V RAT + +Q QT+
Sbjct: 194 ADNEIIDAVIEGLNDIPLGDGNLKVSRAT--------------------VGLQ----QTT 229
Query: 262 GMNTLGGGMSLFG-------ETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
G++ G +S+ ++V+CL +T+D L +DEEYEEI ED+ EECGKYGT
Sbjct: 230 GLDGGVGAISMLAGASAAENREHSRVVCLMNMVTSDELLNDEEYEEIKEDIEEECGKYGT 289
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
++ IPRP GVGK++++Y D A AL+GR+F TV A + E+ +
Sbjct: 290 ILETKIPRP-AGARVNLGVGKIYIKYQDTESAQKAIKALAGRQFSRRTVVATEFSEEGF 347
>gi|451849636|gb|EMD62939.1| hypothetical protein COCSADRAFT_200575 [Cochliobolus sativus
ND90Pr]
Length = 576
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 177/359 (49%), Gaps = 54/359 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
+ ++R+YV LP Q I FF+ + + S GP D V+ +I K++A +E +
Sbjct: 252 KQSKRLYVHNLPSGCTSQEIMEFFNTQLNGLNVVS-GP-DPCVSAHIATSKEYAALEFKA 309
Query: 90 VEEASNAMALDGIIF-------EGVAVRVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGL 141
E+A+ A+A++GI + + +RRP DY PT P P +++V
Sbjct: 310 PEDATLALAMNGISMRDDGGAPDRAGLSIRRPKDYITPTADENAYP----PGDEVSSVV- 364
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
+ P+++ + +P Y E QI+EL+E+ G L F LVKD T +G FC Y
Sbjct: 365 -------KDSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTSTDQHRGIAFCEY 417
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D + D LN + +GD L V RAT + +Q QT+
Sbjct: 418 ADNEIIDAVIEGLNDIPLGDGNLKVSRAT--------------------VGLQ----QTT 453
Query: 262 GMN-------TLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
G++ L G ++ ++V+CL +T+D L +DEEYEEI ED+ EECGKYGT
Sbjct: 454 GLDGGVGAISMLAGASAVENREHSRVVCLMNMVTSDELLNDEEYEEIKEDIEEECGKYGT 513
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
++ IPRP GVGK++++Y D A AL+GR+F TV A + E+ +
Sbjct: 514 ILETKIPRP-AGARVNLGVGKIYIKYQDIESAQKAIKALAGRQFSRRTVVATEFSEEGF 571
>gi|399216439|emb|CCF73127.1| unnamed protein product [Babesia microti strain RI]
Length = 424
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 188/405 (46%), Gaps = 51/405 (12%)
Query: 8 FGATQLGAFPL-MPVQVMTQQATRHARRVYVGGLPP------LANEQA-IATFFSQVMTA 59
FG G+ L +P + +A R RR+Y+G +P L + Q+ I F + +
Sbjct: 34 FGFDSSGSSALAIPAADLDPEAERRHRRLYIGNVPAGNHNTNLGSSQSDIVAFLNGALLT 93
Query: 60 IGGNS---AGPGDAVVNV--YINHEKKFAFVEMRTVEEASNAMALDGII-------FEGV 107
+ N+ A P D + N E +F F+E+R V+ + +DGI + G
Sbjct: 94 VLSNTGMPATPADTPITKCESFNSENRFCFIELRNVDVTLVCLKMDGISLVDSGINYNGN 153
Query: 108 AVRVRRPTDYNP----TLAAALGPG--QPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLP 161
A+++ RP+DY P LA + P QP +A ++ + +P
Sbjct: 154 ALKISRPSDYVPPSNNELATQMQPTIQQPPRGFTMALQVF------------KLHIQNIP 201
Query: 162 YYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGD 221
E + EL++ FG + ++KD TG K F ++D + A AL G ++
Sbjct: 202 TTMAEDGVLELVKEFGDVKYVYIIKDT-TGQHKNTAFVEFKDSVSLEPASKALTGKEVEG 260
Query: 222 KTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSL-------FG 274
++LT + T++ + LA + ++ ++ S +S+ G
Sbjct: 261 QSLTAKIVTSNQADTLAS----LAAGKYNLGATHLSTSISRKILSDPLLSIGVQSGRKIG 316
Query: 275 ETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
T++ V+ L + + L DD+ Y+ +LED+R+E KYGTL ++VIPRP+ + GVG
Sbjct: 317 ATVSTVVQLLNIVFHEDLIDDDSYQSLLEDIRKEAKKYGTLEDIVIPRPNLDKTFNEGVG 376
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGN-TVNAFYYPEDKYFNKDY 378
KVFL++ D + A+ L+GR+F V A +YP DK+ K Y
Sbjct: 377 KVFLQFADELSSRKAQYMLNGRRFDAKRVVCAAFYPLDKFLEKTY 421
>gi|403367221|gb|EJY83425.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 543
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 175/370 (47%), Gaps = 36/370 (9%)
Query: 31 HARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTV 90
+ R++ + LPP E+ + +F V+++ + +++V + F +E R
Sbjct: 187 YKRKLVIQNLPPDITEEDVMNYFFTVISSFS-KVEYQKNPIMSVIKYKDLGFVTLEFRKR 245
Query: 91 EEASNAMALDGIIFE-GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
+E + LDG + G +R+ R + A + G+ G++ + G
Sbjct: 246 DEGEICLTLDGTEYRTGYKMRIMRVKRFIDDWNADIDKGKNPIEAMTRGKGVSLFSTGNN 305
Query: 150 E-----GPD--------------RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD-RD 189
+ PD R+++G +P + +K++ ESFG L F+LVKD +
Sbjct: 306 QFKEPAKPDQKAGKKEKVEEVDNRLYMGNIPNSMKDEDVKKMCESFGRLKAFNLVKDPMN 365
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ 249
+KGY F Y D D A +LNGL +K L V++A+A KT Q I +
Sbjct: 366 PDLNKGYAFFEYVDERSIDKAIKSLNGLDFKEKKLKVQKASA---HQKTSQTQIQIGMYK 422
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
++ +K + LF T ++V+ I+ + L +++E + +D+ +EC
Sbjct: 423 NVPDEKRL-----------PIPLFAMTPSRVVQFINMISVEDLFEEDEIIHVKDDLLQEC 471
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
YG ++++ IP+PD+ G T GVGK+F+++ V A+ LSGRK+ G TV +YP
Sbjct: 472 KNYGEIISIEIPKPDEQGHATYGVGKIFVKFNHIVAAKQARYKLSGRKYNGRTVVVSFYP 531
Query: 370 EDKYFNKDYS 379
E + K++S
Sbjct: 532 EHYFDIKEFS 541
>gi|189204129|ref|XP_001938400.1| splicing factor U2AF 65 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985499|gb|EDU50987.1| splicing factor U2AF 65 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 572
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 171/352 (48%), Gaps = 40/352 (11%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
+ ++R+YV LP Q I FF+ + G N D ++ +I K++A +E +
Sbjct: 248 KQSKRLYVHNLPSGCTSQEIMEFFNNQLN--GLNVVSGNDPCLSAHIATSKEYAALEFKA 305
Query: 90 VEEASNAMALDGIIF--EGVA-----VRVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGL 141
E+A+ A+A+ GI EG A + +RRP DY PT P P +++V
Sbjct: 306 PEDATLALAMTGISMRDEGGAPDRSGLSIRRPKDYITPTADENAYP----PGDEVSSVV- 360
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
+ P+++ + +P Y E QI+EL+E+ G L F LVKD T +G FC Y
Sbjct: 361 -------KDSPNKLSIVNIPTYIEEEQIRELVETMGKLKAFILVKDTGTDQHRGIAFCEY 413
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D + D LN + +GD L V RAT QS + A
Sbjct: 414 ADNEIIDAVIEGLNDIPLGDGNLKVSRATVGLQQSTGLDGGVGA---------------- 457
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
++ L G + ++V+CL +T+D L +DEEYEEI ED+ EECGKYG +V IP
Sbjct: 458 -ISMLAGASAAENHEHSRVVCLMNMVTSDELLNDEEYEEIKEDIEEECGKYGPIVETKIP 516
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
RP GVGK++++Y D A AL+GR+F TV A + E+ +
Sbjct: 517 RP-AGARVNLGVGKIYIKYQDTESAQKAIKALAGRQFSRRTVVATEFSEEGF 567
>gi|145536694|ref|XP_001454069.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421813|emb|CAK86672.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 148/311 (47%), Gaps = 41/311 (13%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIF-EGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
K + +E + E + D + F ++V +P + L L P LN
Sbjct: 141 KSWVVLECSSKEAKRALVTQDQVQFVNNCKIKVEKPRKF---LERILNPQAKEAELN--- 194
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD--RDTGNSKGY 196
A E R+++GGLP Y + + +L++SFGT F+LVKD +T SKGY
Sbjct: 195 ------ADQKQEDNTRLYLGGLPTYLRDEDVMKLIQSFGTTKYFNLVKDTTSNTEISKGY 248
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILA--------QAQ 248
F Y+ A T A ALN L++GDK L + + Q S LA Q Q
Sbjct: 249 CFFEYEKTASTAKALKALNNLQIGDKKLKICKKINGRDQPSNYAGSFLASCDLLRIPQVQ 308
Query: 249 QHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREE 308
Q + I + AL S KV+ + + L +D+ YEE++ED+R E
Sbjct: 309 QMLTIPQSALIPS-----------------KVVQFLNMCSIEDLYEDDIYEELMEDIRSE 351
Query: 309 CGKYGTLVNVVIPRPDQNGGE-TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
C ++G + + IPRPD++ G P VGK+F+++Y + AK L+GR + T+ +
Sbjct: 352 CIRFGQIEKIEIPRPDKDSGFCNPAVGKIFVKFYYQIPAKKAKFHLAGRTYNKRTIITSF 411
Query: 368 YPEDKYFNKDY 378
YPE+++ KDY
Sbjct: 412 YPEEQFDYKDY 422
>gi|428671645|gb|EKX72563.1| conserved hypothetical protein [Babesia equi]
Length = 455
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 163/366 (44%), Gaps = 52/366 (14%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
ATR R +YVG +PP+++ + F ++ + AI G S PG+ + +I+ + +AF+E+
Sbjct: 72 ATRPYREIYVGNIPPVSDVSTLLDFLNEALIAINGTSM-PGNPCLKGWISSDSHYAFIEL 130
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNP-TLAAALGPGQPSPNLNLAAVGL----- 141
RT+EEASN M L G+ G +RV RP Y P LA A P P+ + +L A+GL
Sbjct: 131 RTMEEASNCMQLTGLNCMGYNIRVNRPKTYTPEMLALAPSPTVPTLDPSLLAMGLKALKN 190
Query: 142 ------ASGAIGGAEG----PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTG 191
A+ I E DR+ + +P ++ +K +E+ G + + D
Sbjct: 191 AREQIVAASDILATEKAKAMTDRLCIIDIPSETQDSDLKSAIEAIGQVKYIHFIND---D 247
Query: 192 NSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI 251
SK YQ I AL L K + A S + Q +
Sbjct: 248 PSKRVCLFEYQHIEQQKI---ALEQLPANHKVIMAIDAVTQG----IINPSYIRQQLEKC 300
Query: 252 AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
I + E +VL L+ ++ + L DD EY +I++D+R EC
Sbjct: 301 EIMR------------------PEVPTRVLWLSNLVSKEELDDDAEYFDIIDDVRTECED 342
Query: 312 YGTLVNVVIPR-------PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVN 364
YG ++ + +PR + +T VG F+ + GC A+ L GR+FG V+
Sbjct: 343 YGQVIRLELPRVPKGLTEEEMKTVDTSSVGCAFVLFTTIDGCTKARKILGGRRFGPRIVD 402
Query: 365 AFYYPE 370
A Y+ E
Sbjct: 403 AHYFSE 408
>gi|118390069|ref|XP_001028025.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila]
gi|89309795|gb|EAS07783.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila SB210]
Length = 480
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 172/360 (47%), Gaps = 34/360 (9%)
Query: 37 VGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNA 96
V +P + + I FF+ +++ + A P VV V + +FA + M S A
Sbjct: 132 VSDIPRMITDIEIKEFFNILISKLRPELAEPS-PVVKVDVMTNGQFATMHMSCKLAKSFA 190
Query: 97 MALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVF 156
+ L G+ F+ + + +P Y + Q V + GA+ + ++++
Sbjct: 191 LTLRGVEFQKCKLMIEKPKQY--FFRMYMEKQQND----DVMVDVDDGALQQMQM-NKIY 243
Query: 157 VGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN---SKGYGFCVYQDPAVTDIACAA 213
+GGLP Y + +++L E+FG L F++ K ++ SKGY F Y+DP +T+ A A
Sbjct: 244 MGGLPTYLKDIDVRKLCETFGKLKYFNVAKQQNENKEQVSKGYCFFEYEDPNITEKAIKA 303
Query: 214 LNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ-HIAIQKMALQTSGMNTLGGGMSL 272
LNGL GD+ L V R T + LA QQ K+A + + LGG +
Sbjct: 304 LNGLPCGDRKLKVSRVTKDQNK--------LANTQQIQSEKNKLAPSNNSGSFLGGSDLI 355
Query: 273 FGETLAKVLCLTE-------------AITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+ K+L + E ++ + L +D+ +++ +D+ EC K G + +
Sbjct: 356 RKDEFQKLLTIPEFTSLPSRVIQLLNMVSIEDLFEDDIVDDLYQDVMTECEKIGPVEKIE 415
Query: 320 IPRPDQNGGET-PGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
IP+P + G P +GKVF+++ + A+ +L+GR + TV A +YPEDK+ KD+
Sbjct: 416 IPKPCKTTGICPPCIGKVFVKFKYMLKAKKARYSLNGRTYNRRTVIASFYPEDKFDRKDF 475
>gi|145544238|ref|XP_001457804.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425622|emb|CAK90407.1| unnamed protein product [Paramecium tetraurelia]
Length = 435
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 151/320 (47%), Gaps = 50/320 (15%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIF-EGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
K + +E + E + D + F ++V RP + L L P A
Sbjct: 141 KSWVVLECSSKEAKRALVTQDQVQFVNNCKIKVERPRKF---LERILNPQ--------AR 189
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD--RDTGNSKGY 196
G S A E R+++GGLP Y + + +L++SFGT F+LVKD +T SKGY
Sbjct: 190 EGELS-AEQKQEDNTRLYLGGLPTYLRDEDVMKLIQSFGTTKYFNLVKDTTSNTEISKGY 248
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKT----EQES---------- 242
F Y++ T A ALN L++GDK L + + Q+K EQ S
Sbjct: 249 CFFEYENTGSTAKALKALNNLQIGDKKLKICKVQGEPQQNKKINGREQPSNYAGSFLASC 308
Query: 243 ---ILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
L Q QQ + I + AL S KV+ + + L +D+ YE
Sbjct: 309 DLLRLPQIQQMLTIPQSALIPS-----------------KVVQFLNMCSVEDLYEDDLYE 351
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGG-ETPGVGKVFLEYYDAVGCATAKNALSGRKF 358
E++ED+R EC ++G + + IPRPD+ G P VGK+F+++Y + AK L+GR +
Sbjct: 352 ELMEDIRSECIRFGQIEKIEIPRPDKESGFCNPAVGKIFVKFYYQIPAKKAKFHLAGRTY 411
Query: 359 GGNTVNAFYYPEDKYFNKDY 378
TV +YPE+++ KDY
Sbjct: 412 NKRTVVTSFYPEEQFDYKDY 431
>gi|294954867|ref|XP_002788334.1| U2 small nuclear ribonucleoprotein, auxiliary factor, large
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239903646|gb|EER20130.1| U2 small nuclear ribonucleoprotein, auxiliary factor, large
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 543
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 172/357 (48%), Gaps = 23/357 (6%)
Query: 44 ANEQAIATFFSQVMTAIGGN--SAGPGDAVVNVYI---NHEKKFAFVEMRTVEEASNAMA 98
+++Q++ FF + A+ GN P VV+V+ + + A VE RT A+ AM
Sbjct: 113 SSQQSVMDFFKGALFAVTGNGGKTTPLHPVVSVFFLISDGHSRTALVEFRTPIAATVAMR 172
Query: 99 LDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPD-RVFV 157
L+GI +G + + RP YN + + + + + S A G + ++ +
Sbjct: 173 LNGIDLDGRKLAITRPHGYNKEDPSKSITAEDIQKVTIEELCGGSSTKKTAPGSNLQLGI 232
Query: 158 GGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGL 217
LP TET +++LLE FG L L++D+ TG SKGYGFC ++DP D AL+
Sbjct: 233 YHLPPVMTETYLRDLLEQFGALTMVSLIRDKTTGLSKGYGFCQFEDPNDADRCLYALDQF 292
Query: 218 KMGDKTLTVRR--------ATASSGQSKTEQESILAQAQQHIA-IQKMALQTSGMNTLGG 268
+G+ +L+V R A G + + LA +A +Q M + L
Sbjct: 293 VLGNYSLSVTRLVPDAQQGGAAGIGGAGVGPATNLADGSSGVAVVQSMTARVLANPALAA 352
Query: 269 GMSL---FGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQ 325
+ G T + V+ L A+ + L + E + I +++REE ++GT++ V +PRP
Sbjct: 353 QLKAGREIGSTPSTVVQLLNAVYIEDLMSETEVKSIEDEIREEAQRHGTVLEVRVPRP-- 410
Query: 326 NGGETP---GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
+ TP GVGK+F+++ D + +GRKF + A +YP D+Y Y+
Sbjct: 411 SASLTPYANGVGKIFVQFADITAARKFQATNNGRKFDDRVMCAAFYPTDRYKMGKYT 467
>gi|18406905|ref|NP_564764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12323801|gb|AAG51869.1|AC079675_4 U2 snRNP auxiliary factor, large subunit, putative; 15147-15692
[Arabidopsis thaliana]
gi|332195616|gb|AEE33737.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 111
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 78/105 (74%)
Query: 274 GETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGV 333
G T K++CLT+ +TAD L DD EY +I+EDM +E GK+G LVNVVIPRP+ + TPGV
Sbjct: 5 GGTPTKIVCLTQVVTADDLRDDAEYADIMEDMSQEGGKFGNLVNVVIPRPNPDHDPTPGV 64
Query: 334 GKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
GKVFLEY D G + A++ ++GRKFGGN V A YYPEDKY DY
Sbjct: 65 GKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 109
>gi|145542929|ref|XP_001457151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424966|emb|CAK89754.1| unnamed protein product [Paramecium tetraurelia]
Length = 429
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 148/320 (46%), Gaps = 50/320 (15%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIF-EGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
K + +E + E + D + F ++V RP + L L P LN
Sbjct: 135 KSWVVLECSSKEAKRALVTQDQVQFVNNCKIKVERPRKF---LERILNPQTKDGELN--- 188
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD--RDTGNSKGY 196
E R+++GGLP Y + + +L++SFG F+LVKD +T SKGY
Sbjct: 189 ------PDQKQEDNTRLYLGGLPTYLRDEDVMKLIQSFGITKYFNLVKDTTSNTEISKGY 242
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKT----EQESILA------- 245
F Y++ T A ALN L++GDK L + + + Q+K +Q S A
Sbjct: 243 CFFEYENAQSTAKALKALNNLQIGDKKLKICKVQGETQQNKKINGKDQPSNYAGSFLASC 302
Query: 246 ------QAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
Q QQ + I + AL S KV+ + L +D+ +E
Sbjct: 303 DLLRIPQVQQMLTIPQSALIPS-----------------KVVQFLNMCSIQDLYEDDIFE 345
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGE-TPGVGKVFLEYYDAVGCATAKNALSGRKF 358
E++ED+R EC +YG + + IPRPD+ G P VGK+F+++Y + AK L+GR +
Sbjct: 346 ELMEDIRSECMRYGQIEKIEIPRPDKESGFCNPAVGKIFVKFYYQIPAKKAKFHLAGRTY 405
Query: 359 GGNTVNAFYYPEDKYFNKDY 378
T+ +YPE+++ KDY
Sbjct: 406 NKRTIITSFYPEEQFDYKDY 425
>gi|146170296|ref|XP_001470832.1| hypothetical protein TTHERM_00484731 [Tetrahymena thermophila]
gi|146145092|gb|EDK31651.1| hypothetical protein TTHERM_00484731 [Tetrahymena thermophila
SB210]
Length = 471
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 7/216 (3%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG--NSAGPGDAVVNVYINH 78
+++ Q RHARR+Y+G +P N++ ++ + + + A GG S + +V I+
Sbjct: 22 IKLDNQSGYRHARRLYIGNIPETINQEYLSEWLYRSLEAAGGLQPSLPSENPIVKCEIDP 81
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYN--PTLAAALGPGQPSPNLNL 136
+ +FAF E+R++EE + + LDGII +R+RRPT+Y P + P N +L
Sbjct: 82 KGRFAFTELRSIEETTALLQLDGIILWHRQLRIRRPTEYEKFPKVQGQFEANIPKLNFDL 141
Query: 137 -AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQI-KEL-LESFGTLHGFDLVKDRDTGNS 193
VG+ +GP+++F+ LP E I EL L G + F LVKD T S
Sbjct: 142 FKTVGIVIIPTIVDDGPNKIFLANLPTKMDELMILDELKLRDMGEIKAFHLVKDNQTNQS 201
Query: 194 KGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRA 229
KGY F ++DP++TD L+G++ +TLT +R+
Sbjct: 202 KGYAFFEFKDPSLTDNCIETLHGMQYAGRTLTCKRS 237
>gi|396472864|ref|XP_003839217.1| hypothetical protein LEMA_P028900.1 [Leptosphaeria maculans JN3]
gi|312215786|emb|CBX95738.1| hypothetical protein LEMA_P028900.1 [Leptosphaeria maculans JN3]
Length = 587
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 170/354 (48%), Gaps = 45/354 (12%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
+ ++R+YV LP + + + FF+ + G N D ++ I K++A +E +T
Sbjct: 264 KQSKRLYVHNLPSGVSSEELMEFFNLQLN--GLNVVSGQDPCLSAQIATSKEYAALEFKT 321
Query: 90 VEEASNAMALDGIIF-------EGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
E+A+ A+A++GI + + +RRP DY P+ + N
Sbjct: 322 PEDATVALAMNGISMREESGGPDRSGLSIRRPKDYI----------TPTADDNAYTGDEV 371
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
S + + P+++ + +P Y E Q++EL+ + G L F LVKD T +G FC Y
Sbjct: 372 SSVV--KDSPNKLSIVNIPTYIEEEQVRELVGTMGKLKAFVLVKDESTDQHRGIAFCEYA 429
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
D + D LN + +GD L V RAT + +Q+ A G
Sbjct: 430 DNEIVDAVIEGLNDIPLGDGNLKVTRAT--------------------VGLQQTAGLDGG 469
Query: 263 ---MNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
++ L G + ++V+CL +T++ L +DEEYEEI ED+ EECGK+GT++
Sbjct: 470 VGAISMLAGASAAENREHSRVICLMNMVTSEELINDEEYEEIKEDIEEECGKFGTILETK 529
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
IPRP GVGK++++Y D A AL+GR+F TV + E+ +
Sbjct: 530 IPRP-AGARVNLGVGKIYIKYQDTESAQKAIKALAGRQFSRRTVVVTEFSEEGF 582
>gi|307106441|gb|EFN54687.1| hypothetical protein CHLNCDRAFT_53018 [Chlorella variabilis]
Length = 247
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 110/213 (51%), Gaps = 36/213 (16%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN-VYINHEK 80
Q+ A R A+RVYVG LP +E + +++M G GD + N ++ +K
Sbjct: 68 QLFNPDAARPAKRVYVGNLPAAVSEAELRQAVNELM--------GNGDLLFNGMHQVQDK 119
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
+AFVE R+VEEASNAMALDG+ F +++ VG
Sbjct: 120 GYAFVEFRSVEEASNAMALDGVKFHDSYLKL---------------------------VG 152
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
L + P ++F+GGLP ++E Q+KE+L FG L F+LV DR TGNSKGY F
Sbjct: 153 LEVVKTVVQDSPHKLFIGGLPCDWSEDQVKEMLMPFGQLKAFNLVMDRGTGNSKGYAFAE 212
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASS 233
+ D VTDI LNG K LTV+RA A S
Sbjct: 213 FMDVHVTDIVIQNLNGKPCNTKFLTVKRALAPS 245
>gi|156086444|ref|XP_001610631.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797884|gb|EDO07063.1| conserved hypothetical protein [Babesia bovis]
Length = 400
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 166/366 (45%), Gaps = 54/366 (14%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
AT+ R +Y+G +PP A+ + F + +TA+ G S PG+ +I+ + +AFVEM
Sbjct: 20 ATKPYREIYIGNIPPQADVNNLLEFLNDALTAVNGTSI-PGNPCQKGWISADSHYAFVEM 78
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNP-TLAAALGPGQPSPNLNLAAVGL----- 141
RT+EEASN + L GI + ++R+ RP YNP L A P P+ + +L A+G+
Sbjct: 79 RTMEEASNCIQLSGINYMNYSLRINRPKTYNPEILTEAPSPTIPTLDPSLLALGIAGLKC 138
Query: 142 ASGAIGGAEG----------PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTG 191
AS I A DR+ V + E +K LE+ G L + + + +
Sbjct: 139 ASEQISAAADMLATERAKAMTDRLCVLNVT---DEPALKRELEAQGNLKYYQYITEDNKP 195
Query: 192 NSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI 251
C+++ + ++ AL GLK D + + G E + Q +
Sbjct: 196 -----PLCIFEYEHI-EMQNIALEGLKKRDVKVELAVDALERG---AMSEDFMKQQIESC 246
Query: 252 AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
I K + T +VL L ++ + L DD EY +I++D+R EC +
Sbjct: 247 DIMKSQIPT------------------RVLLLANLVSKEDLEDDAEYYDIIDDVRCECEE 288
Query: 312 YGTLVNVVIPR-------PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVN 364
YG +V V +PR + + VG F+ + + G + A+ L GRKFG V
Sbjct: 289 YGPVVRVEMPRVPKGLTLDEIRNMDFSAVGCAFVLFSNIEGASKARKVLDGRKFGHRIVE 348
Query: 365 AFYYPE 370
++ E
Sbjct: 349 CHFFSE 354
>gi|145538137|ref|XP_001454774.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422551|emb|CAK87377.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 147/320 (45%), Gaps = 50/320 (15%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIF-EGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
K + +E + E + D + F ++V RP + L L P LN
Sbjct: 132 KSWVVLECSSKEAKRALVTQDQVQFVNNCKIKVERPRKF---LERILNPQARDGELNPEQ 188
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD--RDTGNSKGY 196
E R+++GGLP Y + + +L++SFG F+LVKD +T SKGY
Sbjct: 189 ---------KQEDNTRLYLGGLPTYLRDEDVMKLIQSFGITKYFNLVKDTTSNTEISKGY 239
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKT----EQESILA------- 245
F Y+ T A ALN L++GD+ L + + + Q+K +Q S A
Sbjct: 240 CFFEYESAQSTAKALKALNNLQIGDRKLKICKVQGETQQNKKINGKDQPSNYAGSFLASC 299
Query: 246 ------QAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
Q QQ + I + AL S KV+ + L +D+ +E
Sbjct: 300 DLLRIPQVQQMLTIPQSALIPS-----------------KVVQFLNMCSIQDLYEDDIFE 342
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGE-TPGVGKVFLEYYDAVGCATAKNALSGRKF 358
E++ED+R EC +YG + + IPRPD+ G P VGK+F+++Y + AK L+GR +
Sbjct: 343 ELMEDIRSECVRYGQIEKIEIPRPDKESGFCNPAVGKIFVKFYYQIPAKKAKFHLAGRTY 402
Query: 359 GGNTVNAFYYPEDKYFNKDY 378
TV +YPE+++ KDY
Sbjct: 403 NKRTVITSFYPEEQFDYKDY 422
>gi|169602913|ref|XP_001794878.1| hypothetical protein SNOG_04461 [Phaeosphaeria nodorum SN15]
gi|160706286|gb|EAT88221.2| hypothetical protein SNOG_04461 [Phaeosphaeria nodorum SN15]
Length = 594
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 169/352 (48%), Gaps = 39/352 (11%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
++ ++R+YV LP + + FF+ + + N D ++ I K +A +E +
Sbjct: 270 SKQSKRLYVHNLPSGTTSEELLEFFNLQLNGL--NVVSGQDPCLSAQIASSKTYAALEFK 327
Query: 89 TVEEASNAMALDGIIF-------EGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
T E+A+ A+A+ GI + + +RRP DY PS + N
Sbjct: 328 TPEDATVALAMSGISMRDDGGGPDRSGLSIRRPKDYI----------TPSADENAYPGDE 377
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
S + + P+++ + +P + E QI+EL+E+ G L+ F LVKD + +G FC Y
Sbjct: 378 VSSVV--KDSPNKLSIVNIPTFIEEEQIRELVETMGKLNAFVLVKDISSEQHRGIAFCEY 435
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D V + LN + +G+ L V RAT +Q + L I++ A TS
Sbjct: 436 ADNEVVNAVIEGLNDITLGEGNLKVSRATVG-----MQQNAGLDGGVNAISMLASAEPTS 490
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
+ +V+CL +T+D L +DEEYEEI ED+ EEC KYG +V IP
Sbjct: 491 NLEH------------GRVVCLMNMVTSDELINDEEYEEIKEDIEEECQKYGPIVETKIP 538
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
RP + GVGK++++Y D A AL+GR+F TV A + E+ +
Sbjct: 539 RP-AGARSSLGVGKIYIKYQDTESAQRAIKALAGRQFSRRTVVATQFSEEGF 589
>gi|340503018|gb|EGR29650.1| splicing factor u2af large subunit, putative [Ichthyophthirius
multifiliis]
Length = 438
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 157/332 (47%), Gaps = 24/332 (7%)
Query: 31 HARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTV 90
HA R+Y+G +P + + + F + + GG PG+ +++ + KKF F+++R++
Sbjct: 114 HALRIYIGNIPDPIDTEDVCHFVYKSLLESGG-LLEPGNPIISKKNDPIKKFIFLQLRSI 172
Query: 91 EEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAE 150
EE S M LDGI+++G ++R RRP DY T+ G + P L+ + + +
Sbjct: 173 EETSACMQLDGILYKGKSLRFRRPKDYT-TMPQVEG-TRKIPILDRNKLRIVQTQVENTY 230
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
+++ V +P +E + ++L+++G L F L D TG SKG+ FC Y T
Sbjct: 231 --NKLQVMNIPETISEEHVMQILQNYGELRSFHLAVDIYTGESKGFAFCEYLTDKATMDC 288
Query: 211 CAALNGLKMGDKTLTVRRATASSGQSKTEQ----------------ESILAQAQQHIAIQ 254
L+G ++ +K + V+R + EQ +SIL + IQ
Sbjct: 289 LNQLSGQQILNKIINVKRCNPNLAPPVEEQMQPIEVLVKNLCDFINKSILESGFKD--IQ 346
Query: 255 KMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGT 314
+ +Q N L E VL + I + +D EYE I D++++ K+G
Sbjct: 347 EEYIQKVISNEGQKYSGLNQEEATSVLKIKNVIDKQVIEEDPEYEFIYNDLKQQLVKFGR 406
Query: 315 LVNVVIPRPDQNGGETPGVGKVFLEYYDAVGC 346
L ++IPR + + VG VF+E+ + C
Sbjct: 407 LKQMIIPRLKEK-YQPDSVGLVFVEFENEKIC 437
>gi|213408691|ref|XP_002175116.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|212003163|gb|EEB08823.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 511
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 154/350 (44%), Gaps = 31/350 (8%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
A+R ARR+ V LP + + F + ++ + V +Y +++A +E+
Sbjct: 184 ASRQARRLKVKELPAEFEVEDLKNVFEESISTSSFHKDRDTKHVTAIYPCKTERYAIIEL 243
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDY-NPTLAAALGPGQPSPNLNLAAVGLASGAI 146
T E+A+ + F+ V + R Y P +++ + +P +LN + A
Sbjct: 244 ATPEDATFIWGARKLKFKNETVLIDRLEGYIVPQISSEVAQKRPKNDLNQKVLDSA---- 299
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
D+V++G LP Y E QI ELL+ FG L L K+ S+GY FC Y
Sbjct: 300 ------DKVYIGSLPLYLNEDQISELLKPFGELQSLFLAKNSADMTSRGYAFCEYISSES 353
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
A LN ++ GD L V+ A Q S+ A I + K + + +
Sbjct: 354 ATAAVQGLNNMEFGDTRLMVQFACVGIQQPVPSPRSVGMAAL--IELSKSSTEAAP---- 407
Query: 267 GGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN 326
+VL + + AD D E+YE+I + ++ +C +YG ++++ +PR +
Sbjct: 408 -----------TRVLQIHNLLDADETLDTEDYEDIRKSVQNKCNEYGQVLDLKLPRETSS 456
Query: 327 GGET---PGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
T PGVG F+ + A A +SG +F ++ YYPED Y
Sbjct: 457 SDNTSAPPGVGVTFVRFGSIKDAANALQHMSGLRFDDRSIVIAYYPEDCY 506
>gi|397623851|gb|EJK67169.1| hypothetical protein THAOC_11833 [Thalassiosira oceanica]
Length = 436
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 174/385 (45%), Gaps = 49/385 (12%)
Query: 29 TRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
T+ +R ++VG PP +E + F S M+ + + P D V KF F+E+
Sbjct: 66 TKLSRELFVGNTPPGTSEALLMQFLSGAMSRV---NLCPPDVTPIVTCRKNDKFCFIELA 122
Query: 89 TVEEASNAMALDGIIFEGVAVRVRRPTDYN----PTLAAALGPGQPSPNLNLAAVGLASG 144
TV+ A+ A+ L+GI F G ++RV RP+ Y+ P+ GQP P +AAV +G
Sbjct: 123 TVDLANKALNLNGIPFLGSSLRVARPSKYSGPHVPSQTWQQLTGQPLPP-GMAAVPENTG 181
Query: 145 AIGGAEGPDRV----FVGGLPYYFTETQIKELL----ESFG--TLHGFDLVKDRDTGNSK 194
G D++ F+G T +++ L E G T+ G +V R +
Sbjct: 182 VTMALSGEDKLSRELFIGNTTPEMTAEMLRDFLGRAMEQVGLSTMPGNPIVTVRPSAK-- 239
Query: 195 GYGFCVYQDPAVTDIACAA-LNGLKMGDKTLTVRRATASSGQSKTE--QESILAQ----- 246
F + ++ + A A LN + L V R + SG E ILA+
Sbjct: 240 ---FAFIEVRSMQEAANALNLNNIPYLGAQLRVGRPSKYSGPETPHGNWEDILAKFMSGE 296
Query: 247 -------AQQHIAIQKMALQTSGMNTLGGGMSLFGETLAK-----VLCLTEAITADALAD 294
Q + +Q+ + ++L ++ +K V+ L +T L D
Sbjct: 297 LHLKNNATQANPLVQQAHAVAAAASSLAPSLASVPPLASKASPSPVVELRHMLTQQDLDD 356
Query: 295 DEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALS 354
D EY +ILED R+EC +GTL N+VIPR + PG K+FLEY A A L+
Sbjct: 357 DNEYNDILEDTRDECSSFGTLKNIVIPR------KGPGATKIFLEYMTAEDAGKAIAGLA 410
Query: 355 GRKFGGNTVNAFYYPEDKYFNKDYS 379
GR F G V A Y+ K+ N+DYS
Sbjct: 411 GRTFDGRKVTAVYFDTVKFANEDYS 435
>gi|85000357|ref|XP_954897.1| snrnp splicing factor (U2AF) [Theileria annulata strain Ankara]
gi|65303043|emb|CAI75421.1| snrnp splicing factor (U2AF), putative [Theileria annulata]
Length = 486
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 52/361 (14%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEE 92
R +Y+G +PP+ + + + +Q + ++ G S PG+ + +I+ + +AF+E+RT+EE
Sbjct: 104 REIYIGNIPPVGDIEILMDIINQALISVNGTSM-PGNPCLKGWISSDGHYAFIELRTMEE 162
Query: 93 ASNAMALDGIIFEGVAVRVRRPTDYN-PTLAAALGPGQPSPNLNLAAVGL---------- 141
ASN M L G+ G ++V RP Y+ + A P P+ + +L A+G+
Sbjct: 163 ASNCMQLTGLNIMGHNIKVNRPKTYDADVFSKAPSPTVPTLDPSLLAMGVQALKSAKEQI 222
Query: 142 -ASGAIGGAEG----PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
A+ I AE DR+ + G+P + + +LL+S GT+ + + KG
Sbjct: 223 AAASDILAAEKAKSITDRLCLVGIPKDMEQQTVVDLLQSQGTIKFTHFIME------KGE 276
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
+++ + D A + K G + + +I A Q I+ Q++
Sbjct: 277 MVVLFEYENLEDQKSALESLPKQGYRVIM----------------AIDAVTQGIISPQQI 320
Query: 257 ALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLV 316
Q + + + E + L L+ ++ + L DDEEY +I++D+R EC YG ++
Sbjct: 321 KTQLANCSLMK------AEIPTRALLLSNLVSKEELDDDEEYVDIIDDIRCECELYGVVL 374
Query: 317 NVVIPR-------PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
V +PR + N + VG F+ + + A+ L GRKFG TV+A ++
Sbjct: 375 RVELPRVPKGLSEEEMNSFDPTSVGSGFVLFSTVDSASKARKVLDGRKFGQRTVHAHFFS 434
Query: 370 E 370
E
Sbjct: 435 E 435
>gi|255082091|ref|XP_002508264.1| RNA binding protein [Micromonas sp. RCC299]
gi|226523540|gb|ACO69522.1| RNA binding protein [Micromonas sp. RCC299]
Length = 493
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG---NSAGPGDAVVNVYINHEKKFA 83
Q TR +RR+YVG LP N++A+ FF+ M G S GP +VVN I HEK FA
Sbjct: 112 QHTRQSRRLYVGSLPKPVNDEALHAFFNNAMVNSGAAIDPSGGP--SVVNTTITHEKGFA 169
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY----NPTLAAALGPGQPSPNLNLAAV 139
F+E R +E+A +A+ DGI+F G + ++RP DY NP + A G P + L
Sbjct: 170 FIEFRRLEDAESALMFDGIVFNGSKLIIKRPKDYDAARNP-IWAMRGQAPPQDEVKLIGE 228
Query: 140 GLASGAI--GGAE----------------------GPDRVFVGGLPYYFTETQIKELLES 175
L G I G E GP +++ GG T+ Q++++L+S
Sbjct: 229 ELPIGTIIVDGKEVKIPLPPPLPSEWPRLPRRTPNGPHKMYCGGFHPLHTDLQVRQVLQS 288
Query: 176 FGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQ 235
G L F ++ D + G G+ F Y+DP ++ +A L G+++ ++ L RR +
Sbjct: 289 VGELKSFAVMPD-ENGRPTGHAFFEYKDPRLSAVAETVLTGIRVRNRRLVCRRMNPDAAP 347
Query: 236 SK 237
K
Sbjct: 348 EK 349
>gi|71027151|ref|XP_763219.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350172|gb|EAN30936.1| hypothetical protein TP03_0201 [Theileria parva]
Length = 509
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 171/366 (46%), Gaps = 39/366 (10%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEE 92
R +Y+G +PP+ + + + +Q + ++ G S PG+ + +I+ + +AF+E+RT+EE
Sbjct: 104 REIYIGNIPPVGDIEILMDIINQALISVNGTSM-PGNPCLKGWISSDGHYAFIELRTMEE 162
Query: 93 ASNAMALDGIIFEGVAVRVRRPTDYNP-TLAAALGPGQPSPNLNLAAVGL---------- 141
ASN M L G+ G ++V RP ++ + A P P+ + +L A+G+
Sbjct: 163 ASNCMQLTGLNIMGHNIKVNRPKTFDADVFSKAPSPTVPTLDPSLLAMGVQALKSAKEQI 222
Query: 142 -ASGAIGGAEG----PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
A+ I AE DR+ + G+P + + + L GT+ + + + N
Sbjct: 223 AAASDILAAEKAKPITDRLCLVGIPKDTDQQTVVDTLRLHGTIKFTNFIMGIENFNYITV 282
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI----A 252
+ +Y +T + + G+ + V + KT ES+ Q + I A
Sbjct: 283 IYVIYIYQLMTIV--------EKGE--MVVLFEYENLEDQKTALESLPKQGYRVILAIDA 332
Query: 253 IQKMALQTSGMNTLGGGMSLF-GETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
+ + + + T SL E +VL L+ ++ D L DDEEY +I++D+R EC
Sbjct: 333 VTQGIISPQQIKTQLANCSLMRAEIPTRVLLLSNLVSKDELEDDEEYVDIIDDVRCECEL 392
Query: 312 YGTLVNVVIPR-------PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVN 364
YG ++ V +PR + + VG F+ + + A+ L GRKFG TV+
Sbjct: 393 YGVVLRVELPRVPKGLTEEEMKAFDPTSVGSAFVLFSTVESASKARKVLDGRKFGQRTVH 452
Query: 365 AFYYPE 370
A ++ E
Sbjct: 453 AHFFSE 458
>gi|298713809|emb|CBJ27181.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1141
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 160/341 (46%), Gaps = 48/341 (14%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE-KKFAFVEMRTVE 91
R ++VGGLP + + F + M + ++ G+ V+ + + + FAF+E+RT E
Sbjct: 749 RELHVGGLPHGVSGVQLQDFLNAAMQYLKIATSA-GNPVIRIAMGPDGTNFAFIELRTEE 807
Query: 92 EASNAMA-LDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAE 150
E + + + GI ++ RP + A +P ++V
Sbjct: 808 ETNATLGRMSGIQCGTGHLKFGRPKAHAAGATAV------APKKEESSV----------- 850
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
+ V LP T+ ++ELL FG L F+L+KD +G SKG Y D +A
Sbjct: 851 ----LMVMNLPDSLTDDHVRELLSPFGELKKFNLLKD-SSGKSKGTAVFEYTDMENGQLA 905
Query: 211 CAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGM 270
+ L+GL +G L V+R A + A + + ++++ + +
Sbjct: 906 LSGLSGLPVGKGKLMVQRVPAM----------MAATLLKPVKVKEVEDEQDNVEPTC--- 952
Query: 271 SLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGET 330
V+ L+ + + LADD EY EI D+ EEC +YG + + +PRP ++G E
Sbjct: 953 ---------VVRLSNMVEVEELADDTEYAEIKGDVVEECEQYGKVKSAEVPRP-EDGKEV 1002
Query: 331 PGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPED 371
G+G++F+E+ D G +NAL+GRKFGG V A YYP D
Sbjct: 1003 LGLGEIFVEFEDVAGATKGRNALAGRKFGGKAVKATYYPLD 1043
>gi|340506650|gb|EGR32741.1| u2 snrnp auxilliary splicing factor, putative [Ichthyophthirius
multifiliis]
Length = 276
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 35/262 (13%)
Query: 136 LAAVGLASGAIGGAEG--PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN- 192
+ + + + EG +++++GGLP Y + +IK+L E+FG L F+L K ++
Sbjct: 26 MDKIQVEDAILDSEEGIQENKIYMGGLPTYLKDPEIKKLCETFGKLKYFNLAKQQNENKE 85
Query: 193 --SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
SKGY F Y+D VTD A ALNGL GD+ L V + T + LA+ QQ
Sbjct: 86 WVSKGYCFFEYEDKEVTDRAIKALNGLPCGDRKLKVSKVTRDQNK--------LAKTQQ- 136
Query: 251 IAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTE-------------AITADALADDEE 297
+Q + LG + E + K+L + E + + L +D+
Sbjct: 137 -------IQNDSGSYLGDCHLIKNEFVRKMLSIPEYTYQPSRVIQLLNMCSPEDLFEDDI 189
Query: 298 YEEILEDMREECGKYGTLVNVVIPRPDQNGGET-PGVGKVFLEYYDAVGCATAKNALSGR 356
Y EI +D++ EC K G + V I RP + G P VGK+F+++ + A++ L+GR
Sbjct: 190 YNEIYQDVQSECEKIGPIEKVEIVRPCKMTGICPPSVGKIFVKFKYLLKAKRARHVLNGR 249
Query: 357 KFGGNTVNAFYYPEDKYFNKDY 378
+ TV A +YPE+K+ K++
Sbjct: 250 TYNKRTVVASFYPEEKFDCKEF 271
>gi|118376950|ref|XP_001021657.1| hypothetical protein TTHERM_00151210 [Tetrahymena thermophila]
gi|89303423|gb|EAS01411.1| hypothetical protein TTHERM_00151210 [Tetrahymena thermophila
SB210]
Length = 554
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 158/364 (43%), Gaps = 40/364 (10%)
Query: 26 QQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFV 85
Q+ HA RVY+G +P + + + F + M GG PG+
Sbjct: 210 QKQYIHALRVYIGNIPDPVDVEDVCKFVFEQMANAGG-LLEPGNP--------------- 253
Query: 86 EMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGA 145
+R++EE S M LDGII++G ++R RRP D+ L G +P P L+ + +
Sbjct: 254 -LRSIEETSACMELDGIIYKGKSLRFRRPKDFG-VLQKVEG-TRPVPTLDKTKLKIVQTQ 310
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ +++ + LP F+E + +LL ++G L F L D+ T SKG+ FC +
Sbjct: 311 VENTY--NKLQIMNLPENFSEEHVMQLLLTYGDLKSFHLAVDKITSESKGFAFCEFITDR 368
Query: 206 VTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIA--IQKMALQTSGM 263
T L+G ++ +K + V+R E L Q +++ + K +++
Sbjct: 369 STVECLNKLSGQQILNKVINVKRCNPQLAPQHEEPILSLDQLYKNLVENVNKTIIESGQK 428
Query: 264 NT----LGGGMS--------LFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
+ L +S L E VL L + + +D EY I D++ + +
Sbjct: 429 DIQEDYLKKMLSINAPKYDGLITEDATNVLKLHNIVNKQLIEEDAEYHFIFNDLKTQLDR 488
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNA-FYYPE 370
G ++IPR E G+G VF+E+ + A L K+ G V A FY P+
Sbjct: 489 IGRTKQIIIPRKKDKFLE--GIGFVFVEFDNERTSQIASFLLQKIKYDGKDVKAEFYSPQ 546
Query: 371 DKYF 374
YF
Sbjct: 547 --YF 548
>gi|403223258|dbj|BAM41389.1| snRNP splicing factor U2AF [Theileria orientalis strain Shintoku]
Length = 534
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 168/367 (45%), Gaps = 49/367 (13%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
ATR R +Y+G +PP+ + + +Q + ++ G S PG+ + +I+ + +AFVE+
Sbjct: 119 ATRPYREIYIGNIPPVGDIAILLDIINQALISVNGTSM-PGNPCLKGWISSDGHYAFVEL 177
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTL-AAALGPGQPSPNLNLAAVGL----- 141
RT+EEASN M L G+ G ++V RP Y+P L + A P P+ + +L A+GL
Sbjct: 178 RTMEEASNCMQLTGLNIMGHNIKVNRPKTYDPDLMSKAPSPTVPTLDPSLLAMGLQALKS 237
Query: 142 ------ASGAIGGAEG----PDRVFVGGLPYYFTETQIKELLESFGTL-HGFDLVKDRDT 190
A+ + AE DR+ + +P + + L+ S G + + + + + ++
Sbjct: 238 AREQIVAASDVLAAEKAKVMTDRLCIVDIPPEADKQTVINLVHSMGEVKYTYFVDEPAES 297
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
G +K Y + D A+ + + L + +I A Q
Sbjct: 298 GTNKRVFLFEYMN---MDHQKKAMEEIPKMNYRLIL---------------AIDAVTQGM 339
Query: 251 IAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECG 310
IA + + Q L + E + L L ++ + L DD EY +I++D++ EC
Sbjct: 340 IAPEYIKKQ------LESCAIMKPEVPTRALLLGNLVSKEELDDDAEYVDIIDDVKTECE 393
Query: 311 KYGTLVNVVIPR-------PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
YG ++ + +PR + + VG F+ + G + A+ L GRKFG TV
Sbjct: 394 DYGVVLRLELPRVPKGLSEEEMRSFDESSVGSAFVLFSTVDGASKARKVLDGRKFGNRTV 453
Query: 364 NAFYYPE 370
A ++ E
Sbjct: 454 KAHFFSE 460
>gi|347968831|ref|XP_003436305.1| AGAP002908-PB [Anopheles gambiae str. PEST]
gi|333467821|gb|EGK96708.1| AGAP002908-PB [Anopheles gambiae str. PEST]
Length = 144
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 93/164 (56%), Gaps = 22/164 (13%)
Query: 217 LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGET 276
+++GDK L V+RA+ + S +++A Q + G+SL G +
Sbjct: 1 MQLGDKKLIVQRASVGAKNSNA---AVVAPVQIQVP----------------GLSLVGSS 41
Query: 277 --LAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
+VLCL +T D L D+EEYE+ILED+REEC KYG + +V IPRP + G + PG G
Sbjct: 42 GPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSVEIPRPIE-GVDVPGCG 100
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
KVF+E+ V C A+ AL+GRKF V Y+ DKY +++
Sbjct: 101 KVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 144
>gi|399216014|emb|CCF72702.1| unnamed protein product [Babesia microti strain RI]
Length = 487
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 44/367 (11%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
++TR +R++ + PP + I +F+ M A+GGN A+ + +++K +E
Sbjct: 129 ESTRFSRQLEISNTPPNIEVEVIIEYFNMAMLAVGGNCLPGNPAIRGKHNSNDKTSITIE 188
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRR----PTDYNPTLAAALGPGQPSPNLNLAAVG-- 140
MRT+EE SNA+ L+G+ G ++ + R P +Y + A P P+ + ++ A+G
Sbjct: 189 MRTLEETSNALQLNGLNLMGKSLSITRVGNCPPEY---INKAPPPTVPTISPSILALGVN 245
Query: 141 ---------LASGAI----GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD 187
L S AI GGA DR+ + LP +E QIK ++E FG L L K+
Sbjct: 246 GLQSADIKPLLSNAITSLVGGAPKTDRLLILDLPITQSEDQIKSMVEEFGKLKYIQLFKN 305
Query: 188 RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
D ++ G C+ + T++ AL +++ + A +K + L +
Sbjct: 306 ADDTSA---GMCLIEF-VDTNVQVEALQKMRLQYNII-----LAEDALTKRIIDRNLLRL 356
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
Q M Q+ M T + L ++ ++ L +D EY+E++ED+R
Sbjct: 357 Q-------MRNQSELMKTQIPTRCIIIRNLVTTASVS-SVQFMILQNDREYQEVIEDIRA 408
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
EC G + V +PR + F+ + G A A+ +L GR+F N V +
Sbjct: 409 ECDLMGQVERVEVPR-----NPPSEMAYAFVLFESIQGAAMARKSLGGRRFASNVVQVDF 463
Query: 368 YPEDKYF 374
Y E+++
Sbjct: 464 YNEEEFM 470
>gi|145547916|ref|XP_001459639.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427465|emb|CAK92242.1| unnamed protein product [Paramecium tetraurelia]
Length = 402
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 51/358 (14%)
Query: 31 HARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTV 90
HA R+Y+G LP ++ + + Q M + G PGD V+ V + +K+ FV+ R++
Sbjct: 86 HAVRLYLGNLPDNVDKDHLHNYIRQQMESHGA-VLDPGDPVIQVQLQPGQKYCFVQFRSI 144
Query: 91 EEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAE 150
EE A+ +D I ++G ++ +R DY ++ + + P I E
Sbjct: 145 EETEAALQIDTINYQGKPLKFKRVKDY--EISPRIEGEREVP------------KIQPKE 190
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN-SKGYGFCVYQDPAVTDI 209
++FV GL + +L +G L ++V RD N KG+ FC ++ T
Sbjct: 191 PAQKLFVCGLAPDTDNDALANILSEYGNLKSLNVV--RDIKNVCKGFAFCEFETDLETQN 248
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKT---------EQESILAQAQQHIAIQKMALQT 260
LN +G + L V++ ++ EQ + A+ QQ I +M + +
Sbjct: 249 CVNGLNNKVIGGRLLQVKKNAQLPTPTQDYIIDTITLGEQSAFEAKLQQ---INQMKVSS 305
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI 320
V+ + A+ + DD EY I++D+++E K G L+++V+
Sbjct: 306 -------------------VVVINNAVRIKNIEDDYEYNFIVKDLKKEIEKIGRLISMVV 346
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
PR + G + G+GKVF+E+ + A L +K+ G ++ +Y Y +K Y
Sbjct: 347 PR--KKDGYSEGIGKVFVEFENEQFAKIAIILLQNKKYDGREIDIAFYDPRLYADKQY 402
>gi|50552688|ref|XP_503754.1| YALI0E09889p [Yarrowia lipolytica]
gi|49649623|emb|CAG79345.1| YALI0E09889p [Yarrowia lipolytica CLIB122]
Length = 601
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 159/366 (43%), Gaps = 52/366 (14%)
Query: 29 TRHARRVYVGGLPP-LANEQAIATFFSQVMTAIGGNSAGPGDAVVN-VYINHEKKFAFVE 86
+R ARR+ + G+P + AI +FF+ + G G + +V+ VY + VE
Sbjct: 262 SRVARRLILSGIPADQIDTVAIKSFFTDFIE--GLELQGSKERIVDGVYKHPRLPEVLVE 319
Query: 87 MRTVEEASNAMALDG--IIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASG 144
+ E A+ A+AL G I + G + +RRP++Y + P ++ ++
Sbjct: 320 FFSAEMATLALALSGLGINYSGPPISIRRPSNY-------ICPTPERSEVSRRSLDEEKE 372
Query: 145 AIGGAEGPD-RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
E + ++ V +P+ E Q+++L SFG L F L++ + S G Y+D
Sbjct: 373 VASVVEDSNTKIIVWDIPFNVEEDQVRQLTASFGELSAFQLIRQLPSRESAGIALVDYKD 432
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGM 263
P V A + L+G +G K L V A Q L S
Sbjct: 433 PEVVKDAVSGLSGQVIGGKNLKVMLACEGPTQ----------------------LSCSSN 470
Query: 264 NTLGGGMSLFGETLAK----VLCLTEAITADALADDEEYEEILEDMREECGKY--GTLVN 317
N L G +++ + ++ V+ L +T D L DD Y EI E + EC KY G V
Sbjct: 471 NGLKGIVTVMNDVKSRPESSVIVLFNLVTLDELLDDVAYREITEQVESECLKYGGGEEVQ 530
Query: 318 VVIPRPDQNGGET----------PGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ IPRPD + PGVGKV++++ A L+G +F +V A Y
Sbjct: 531 IKIPRPDPEAMKASYRRLIFETRPGVGKVYVKFASVETSRVAMQKLTGLRFSRRSVIASY 590
Query: 368 YPEDKY 373
Y E+ +
Sbjct: 591 YSEECF 596
>gi|19112188|ref|NP_595396.1| U2AF large subunit (U2AF-59) [Schizosaccharomyces pombe 972h-]
gi|549144|sp|P36629.1|U2AF2_SCHPO RecName: Full=Splicing factor U2AF 59 kDa subunit; AltName: Full=U2
auxiliary factor 59 kDa subunit; Short=U2AF59; AltName:
Full=U2 snRNP auxiliary factor large subunit
gi|410322|gb|AAA03578.1| splicing factor U2AF large subunit [Schizosaccharomyces pombe]
gi|5441489|emb|CAB46760.1| U2AF large subunit (U2AF-59) [Schizosaccharomyces pombe]
Length = 517
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 168/374 (44%), Gaps = 34/374 (9%)
Query: 3 QNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG 62
+ +L F + G+ + P + A+R ARR+ V G+P E A +F + +
Sbjct: 170 EKLLEFARSAEGSI-IAPPPPLQPGASRQARRLVVTGIPNEFVEDAFVSFIEDLFISTTY 228
Query: 63 NSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEG-VAVRVRRPTDYNPTL 121
+ +V + E+ FA +E+ T E+A+ L + V ++ +R +Y
Sbjct: 229 HKPE-TKHFSSVNVCKEENFAILEVATPEDATFLWGLQSESYSNDVFLKFQRIQNY---- 283
Query: 122 AAALGPGQPSPNLNLA-AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
+ P Q +P ++ + A + + D++++ LP E Q+ ELL+ FG L
Sbjct: 284 ---IVP-QITPEVSQKRSDDYAKNDV--LDSKDKIYISNLPLNLGEDQVVELLKPFGDLL 337
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
F L+K+ G+SKG+ FC +++P+ ++A + L+G L + A Q+
Sbjct: 338 SFQLIKNIADGSSKGFCFCEFKNPSDAEVAISGLDGKDTYGNKLHAQFACVGLNQA---- 393
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETL-AKVLCLTEAITADALADDEEYE 299
M +++GM L +++ +VL L IT D + D +EYE
Sbjct: 394 ---------------MIDKSNGMAILTELAKASSQSIPTRVLQLHNLITGDEIMDVQEYE 438
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
+I E ++ + YG L+++ IPR G GKVF+ Y D A + G KF
Sbjct: 439 DIYESVKTQFSNYGPLIDIKIPRSIGTRNSGLGTGKVFVRYSDIRSAEVAMEEMKGCKFN 498
Query: 360 GNTVNAFYYPEDKY 373
T+ +Y ED Y
Sbjct: 499 DRTIVIAFYGEDCY 512
>gi|312372039|gb|EFR20089.1| hypothetical protein AND_20681 [Anopheles darlingi]
Length = 384
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 125/284 (44%), Gaps = 23/284 (8%)
Query: 114 PTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELL 173
P Y AA P + AAV + I R++VG +P+ TE ++ E
Sbjct: 105 PLQYKAMQAAGQIPANIVADTPQAAVPVVGSTI--TRQARRLYVGNIPFGVTEEEMMEFF 162
Query: 174 ESFGTLHGF-----DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
L G + V K + F ++ T A A + + ++L +RR
Sbjct: 163 NQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQA-MAFDSINFKGQSLKIRR 221
Query: 229 ATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGG------------GMSLFGET 276
+ + ++ + + S G G+SL G +
Sbjct: 222 PHDYQPMPGMTDSATVNVPEKFSGVISTVVPDSAHKIFIGGLPNYLNEDQVPGLSLVGSS 281
Query: 277 --LAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
+VLCL +T D L D+EEYE+ILED+REEC KYG + +V IPRP + G + PG G
Sbjct: 282 GPPTEVLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSVEIPRPIE-GVDVPGCG 340
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
KVF+E+ V C A+ AL+GRKF V Y+ DKY +++
Sbjct: 341 KVFVEFNSIVDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRREF 384
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 16/158 (10%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P V V+ TR ARR+YVG +P E+ + FF+Q M + G + G+ V+ I
Sbjct: 126 PQAAVPVVGSTITRQARRLYVGNIPFGVTEEEMMEFFNQQM-HLSGLAQAAGNPVLACQI 184
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
N +K FAF+E R+++E + AMA D I F+G ++++RRP DY P PG +
Sbjct: 185 NLDKNFAFLEFRSIDETTQAMAFDSINFKGQSLKIRRPHDYQPM------PGM----TDS 234
Query: 137 AAVGLA---SGAIGGA--EGPDRVFVGGLPYYFTETQI 169
A V + SG I + ++F+GGLP Y E Q+
Sbjct: 235 ATVNVPEKFSGVISTVVPDSAHKIFIGGLPNYLNEDQV 272
>gi|296083697|emb|CBI23686.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 160/360 (44%), Gaps = 67/360 (18%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
+ QATR RR+YV LP ++E+A+ + + + G N ++ I+ EK
Sbjct: 393 IQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCISCIIHKEKGQ 452
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
A VE T E+AS A++ DGI F G +++RRP D+ L A A
Sbjct: 453 ALVEFLTPEDASAALSFDGISFSGSILKIRRPKDFVDMTGV---------QEKLVAAPDA 503
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
I + P ++F+GG+ + + E+ +FG L + + D G + F Y
Sbjct: 504 ISDI-VKDSPHKIFIGGISRALSSDMLMEIAAAFGPLKAYRFQVNEDLG--EPCAFLEYV 560
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
D +VT ACA LNG+K+G + LTV +A ++ +A++ +
Sbjct: 561 DQSVTLKACAGLNGMKLGGQVLTVVQAIPNA----------------------LAMENT- 597
Query: 263 MNTLGGGMSLFG---------ETLAKVLCLTEAITADALA--DDEEYEEILEDMREECGK 311
G + +G E +VL L + D L+ + E EEILED+R EC +
Sbjct: 598 -----GNLPFYGIPEHAKPLLERPTQVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTR 652
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDA-------VGCATAKNALSGRKFGGNTVN 364
+GT+ +V I + + + T LE Y+A +GC N++ GG T N
Sbjct: 653 FGTVKSVNIVKYNNSHVST-------LEVYEAADNTGSNLGCDG--NSMKAETLGGGTDN 703
>gi|294948294|ref|XP_002785691.1| splicing factor u2af large subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239899714|gb|EER17487.1| splicing factor u2af large subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 370
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 15/296 (5%)
Query: 97 MALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPD-RV 155
M L+GI +G + + RP YN + + + + + S A G + ++
Sbjct: 1 MRLNGIDLDGRKLAITRPHGYNKEDPSKSITAEDIQKVTIEELCGGSSTKKTAPGSNLQL 60
Query: 156 FVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALN 215
+ LP TET +++LLE FG L L++D+ TG SKGYGFC ++DP D AL+
Sbjct: 61 GIYHLPPVMTETYLRDLLEQFGALTMVSLIRDKTTGLSKGYGFCQFEDPNDADRCLYALD 120
Query: 216 GLKMGDKTLTVRRATASSGQSKTEQESILAQ------AQQHIAIQKMALQTSGMNTLGGG 269
+G+ +L+V R + Q A +Q M + L
Sbjct: 121 QFVLGNYSLSVTRLVPDAQQGGAAGIGGAGVGPATNLADGSSGVQSMTARVLANPALAAQ 180
Query: 270 MSL---FGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN 326
+ G T + V+ L A+ + L + E + I +++REE ++GT++ V +PRP +
Sbjct: 181 LKAGREIGSTPSTVVQLLNAVYIEDLMSETEVKSIEDEIREEAQRHGTVLEVRVPRP--S 238
Query: 327 GGETP---GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
TP GVGK+F+++ D + +GRKF + A +YP D+Y Y+
Sbjct: 239 ASLTPYANGVGKIFVQFADITAARKFQATNNGRKFDDRVMCAAFYPTDRYKMGKYT 294
>gi|118489922|gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 787
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 142/303 (46%), Gaps = 38/303 (12%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
+ QAT RR+Y+ +P A+E+A+ + + + G + ++ EK
Sbjct: 285 IQLTQATHPIRRLYMENIPASASEKAVMDCLNNFLISSGVHHIQGTQPCISCIRQKEKGQ 344
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
A VE T E+AS A++ DG F G ++VRRP D+ + A G L A
Sbjct: 345 ALVEFLTPEDASAALSFDGRSFSGSIIKVRRPKDF---IEVATG--------ELEKSAAA 393
Query: 143 SGAIGG--AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
AIG + P ++F+GG+ + + E+ +FG L + +D + + F
Sbjct: 394 IDAIGDIVKDSPHKIFIGGISKVLSSKMLMEIASAFGPLKAYQFENRKDP--DEPFAFLE 451
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y D +VT ACA LNG+K+G + +T +A ++ S ++ S Q QH
Sbjct: 452 YADESVTFKACAGLNGMKLGGQVITAIQAVPNASSSGSDGNSQFGQISQH---------- 501
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALA--DDEEYEEILEDMREECGKYGTL--V 316
+L E +VL L +++L+ + E EE+LED+R EC ++G++ +
Sbjct: 502 --------AKALL-EKPTEVLKLKNVFDSESLSSLSNTEVEEVLEDVRLECARFGSVKSI 552
Query: 317 NVV 319
NV+
Sbjct: 553 NVI 555
>gi|428172624|gb|EKX41532.1| hypothetical protein GUITHDRAFT_112506 [Guillardia theta CCMP2712]
Length = 514
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 165/377 (43%), Gaps = 40/377 (10%)
Query: 22 QVMTQQATRHARRVYVGGLP---PLANEQAIATFFSQVMTAI-------------GGNSA 65
Q Q T ARRVYVG LP P +E A+ FF Q M + G +
Sbjct: 128 QSANPQLTLKARRVYVGNLPQLDPPISEPALKEFFDQAMHQVQDQGAYFKAEFAQAGLTQ 187
Query: 66 GPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAAL 125
PG V +V+I+ EK FAF+E+RTV+EA++AM LDGI F G +RV RP DY P A+
Sbjct: 188 SPGCCVCDVWISSEKHFAFIEVRTVQEATSAMTLDGITFYGTPLRVNRPHDYVPPAPDAM 247
Query: 126 GPGQPSPNLNLAAVGLA---SGAIGGAEGPDRVFVGGLPY-YFTETQIKELLESFGTLHG 181
L + G+A S + + R+ VG L T +K+ + ++
Sbjct: 248 IMTMAQAGLMGSGGGIAANLSALMQQTKKARRIHVGNLLVGSMTSASLKQFISQ--SMQQ 305
Query: 182 FDLVK-------DRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSG 234
LV D +GF + A + A AL+G++ + + V R
Sbjct: 306 LSLVVKPGDPCIDSFLSGDGNFGFVEMRTVAEANNA-MALSGIECNGRPIRVGRPADYVP 364
Query: 235 QSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAK---VLCLTEAITADA 291
+ ++AQ Q I +G GM L G +K V+ + ++ D
Sbjct: 365 LNA----ELIAQC-QGTGILGTPGDAGVTEAVGAGM-LNGPDESKATEVVVIRNMMSDDD 418
Query: 292 LADDEEYEEILEDMREEC-GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAK 350
LA+D+E ++I ED +C +YG +V VI RP + G +G V +++ A
Sbjct: 419 LANDDECKDIAEDTISKCEEEYGKVVRFVIVRPGREGAPADLIGNVLVQFETKESAIKAA 478
Query: 351 NALSGRKFGGNTVNAFY 367
N L+ KF V Y
Sbjct: 479 NDLNHVKFDERVVETDY 495
>gi|432095994|gb|ELK26905.1| Splicing factor U2AF 65 kDa subunit [Myotis davidii]
Length = 171
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 94/177 (53%), Gaps = 36/177 (20%)
Query: 19 MPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINH 78
MPV V TR ARR+ VG +P E+A+ +N
Sbjct: 31 MPVPVAVSNMTRQARRLCVGNIPFGITEEAM--------------------------VNR 64
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
+K FAF+E R+V+E + AMALDGIIF+G ++++RRP DY P + P P
Sbjct: 65 DKNFAFLEFRSVDETTQAMALDGIIFQGQSLKIRRPHDYQPLPDMSENPSVYLP------ 118
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
G+ S + + ++F+GGLPYY + Q+KELL SFG L F+LVKD TG S+G
Sbjct: 119 -GVVSTVV--PDSAHKLFMGGLPYYLKD-QVKELLTSFGPLKAFNLVKDGATGLSRG 171
>gi|383125816|gb|AFG43490.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125818|gb|AFG43491.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125820|gb|AFG43492.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125822|gb|AFG43493.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125824|gb|AFG43494.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125826|gb|AFG43495.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125828|gb|AFG43496.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125830|gb|AFG43497.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125832|gb|AFG43498.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125834|gb|AFG43499.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125836|gb|AFG43500.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
Length = 93
Score = 112 bits (280), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/88 (56%), Positives = 64/88 (72%)
Query: 286 AITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVG 345
A+ D L DD+E+E+I +DM+EECGK+G + +VIPRP G E PGVGKVF+EY +
Sbjct: 1 AVNPDELLDDQEFEDIYDDMKEECGKHGEITKLVIPRPKSTGEEVPGVGKVFVEYANTQS 60
Query: 346 CATAKNALSGRKFGGNTVNAFYYPEDKY 373
A A+ +L GRKFGGN V A YYPEDK+
Sbjct: 61 SAKARASLHGRKFGGNVVVAVYYPEDKF 88
>gi|403345499|gb|EJY72120.1| Splicing factor U2af large subunit, putative [Oxytricha trifallax]
Length = 437
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 158/378 (41%), Gaps = 48/378 (12%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA--GPGDAVVNVYIN 77
P Q +T + R++YVG +PP I + + +G ++ GD +V +I+
Sbjct: 83 PSQGLTNH-NKAERQLYVGNIPPGLAVPQIMELLNTALKELGKDAGIFQEGDPIVGAWIS 141
Query: 78 HEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY-----NPTLAAALGP----G 128
+ +AFV+ RT EEA+ AL + G ++V RP + NP+ A P G
Sbjct: 142 GDGHYAFVDFRTAEEATQGFALQQVSIHGNNLKVGRPKNATGPIPNPSQLLAGNPNLMSG 201
Query: 129 QP--SPNLNLAAVGLASGAIGGAEGP------DRVFVGGLPYYFTETQIKELLESFGTLH 180
Q S N GL + +G +V V P ++ I ++ E FG +
Sbjct: 202 QNVISNNKKKTNQGLKNLQLGDQGNQIIQALNTKVMVSNFPVNHSKESIHKICEVFGKVK 261
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
DL+KD TG KG ++D L G K+ +K L V+R T S + +
Sbjct: 262 NVDLLKDITTGEFKGQVNVEFEDELEAKKGYTGLMGFKIDEKVLFVKRLTTISAPTTQIE 321
Query: 241 ESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEE 300
+ +L + + L L I + + + ++Y++
Sbjct: 322 GEVFK-------------------------NLIEDKPTECLMLKNCIILEEMTERDDYKD 356
Query: 301 ILEDMREECGKYGTLVNVVIPRPDQNGG--ETPGVGKVFLEYYDAVGCATAKNALSGRKF 358
+ + EE +YG +V V PRP G PGVGKV++ + AK+ + R+
Sbjct: 357 LEIAVEEEMSRYGKVVKVHCPRPPIFGDPYSVPGVGKVYVRFQTEEDSEKAKHGIYKRRL 416
Query: 359 GGNTVNAFYYPEDKYFNK 376
G V+ YY +K FNK
Sbjct: 417 NGRAVDPVYYSVEK-FNK 433
>gi|218192051|gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indica Group]
Length = 1128
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 157/343 (45%), Gaps = 43/343 (12%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQ-VMTAIGGNSAGPGDAVVNVYINHEKK 81
V QATR RR+++ LP LA E + ++ ++++ + ++ IN +K+
Sbjct: 628 VQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKR 687
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
AFVE T E+A+ A++ DG F G ++++RRP +Y A + P +PS + L + +
Sbjct: 688 QAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEY--VEMAHVAPKKPSEEIKLISDVV 745
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
A+ P ++F+ G+ + + E++ SFG L + + + D G + F Y
Sbjct: 746 -------ADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEDLGGA--CAFLEY 796
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D ++T ACA LNG+K+G LT +S TEQ +A I A
Sbjct: 797 IDHSITSKACAGLNGMKLGGGILTAVNVFPNS----TEQ--AFNEASPFYGIPDSA---- 846
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADA--LADDEEYEEILEDMREECGKYGTLVNV- 318
SL E KVL L + L E EEILED+R EC ++G + ++
Sbjct: 847 --------KSLL-EEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSIN 897
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
V+ P + T G E C + +++GGN
Sbjct: 898 VVEYPASSDNTT---GDTITE------CEDGSTKIEPKEYGGN 931
>gi|429328959|gb|AFZ80718.1| hypothetical protein BEWA_001250 [Babesia equi]
Length = 711
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 158/381 (41%), Gaps = 82/381 (21%)
Query: 47 QAIATFFSQVM----TAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGI 102
Q + FF+ + T+I N GP + N E+ + F+E T E A LDGI
Sbjct: 363 QDVVDFFNGALMTMSTSIDIN--GPMPVMKTEIFNQEQGYCFLEFTTAEYADLCYKLDGI 420
Query: 103 IFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPY 162
G ++++RRP D++ ++++ ++FV +P
Sbjct: 421 QCNGYSLKLRRPIDFSSSMSSE---------------------------DTKIFVQNIPE 453
Query: 163 YFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDK 222
F+E I++LLE+ G L +LV D T +KGYGF Y+ + A LNG + +
Sbjct: 454 SFSEEDIRKLLEAHGKLKTCNLVIDPFTRLNKGYGFFEYESSSSAKEAVIHLNGHVIQNN 513
Query: 223 TLTVRRATASS----GQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA 278
L+V+ A SS G+ + S + + H L G+ G G +
Sbjct: 514 VLSVKHAAFSSFAAGGKPADCRASSIITSVSHCVFSNPLL---GLQMQNGRKK--GSEPS 568
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPR---------------- 322
+V+ L + + + DD+ Y E+L++++EE KYG L + IPR
Sbjct: 569 RVVQLLNVVYPEDILDDKNYREMLKEIKEEAQKYGPLEEIYIPRIHKREEPASIEDVKTE 628
Query: 323 -----------------------PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
D+N GVGKVFL+Y + A+ L+GR F
Sbjct: 629 GNDKVAVKSEETSVKTDVRQQTIEDRNKEYQLGVGKVFLKYSNETAGRKAQYMLNGRIFD 688
Query: 360 GN-TVNAFYYPEDKYFNKDYS 379
N V A ++P D Y Y+
Sbjct: 689 KNRVVCAAFFPCDLYQQGKYT 709
>gi|320170643|gb|EFW47542.1| splicing factor u2af large subunit [Capsaspora owczarzaki ATCC
30864]
Length = 393
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 99/173 (57%), Gaps = 9/173 (5%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R +RR+Y+GG+ P + I F ++ M G S+ PG+ V+ + + +K FAF++MRT
Sbjct: 98 RQSRRLYIGGIVPGTPDVLIVDFLNREMNQRGMTSS-PGNPVLAIQMTPDKNFAFLDMRT 156
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYN-------PTLAAALGPGQPSPNLNLAAVGLA 142
EEA+ +ALDGI FEG R++RP +Y P+L + A G +
Sbjct: 157 SEEATMCIALDGIPFEGTVFRIKRPKEYEGREANDPPSLFGMPSSSGGGFSSQGGAQGGS 216
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
G G + P+++++GGLP+ E QI+ELL++FG + F LV++ G SKG
Sbjct: 217 FGGSMGNDNPNKIYIGGLPFSLDEQQIRELLQTFGVIRNFSLVRE-GNGQSKG 268
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
V+ L +T + L D EEY++I++D+REEC KYG +V+V IPRP G E GVGKV++E
Sbjct: 296 VVQLLNMVTPEELMDPEEYQDIVDDIREECSKYGEVVSVAIPRP-VPGREVSGVGKVYVE 354
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+ + A ALSGRKF V +Y D Y ++
Sbjct: 355 FSNVDHAYQALQALSGRKFASRIVVTSFYGLDAYRRSEF 393
>gi|71996481|ref|NP_497326.2| Protein UAF-1, isoform b [Caenorhabditis elegans]
gi|351018335|emb|CCD62279.1| Protein UAF-1, isoform b [Caenorhabditis elegans]
Length = 143
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 19/162 (11%)
Query: 217 LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGET 276
+++GDK L V+ A A+ + T L S G +S
Sbjct: 1 MQLGDKQLVVQLACANQQRHNTN------------------LPNSASAIAGIDLSQGAGR 42
Query: 277 LAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKV 336
++LCL +T D L D+EYEEILED+R+EC KYG + ++ IPRP ++ PGVGKV
Sbjct: 43 ATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHP-VPGVGKV 101
Query: 337 FLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
F+E+ C A+ AL+GRKF TV YY DKY N+ +
Sbjct: 102 FVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 143
>gi|303279322|ref|XP_003058954.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460114|gb|EEH57409.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 559
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 33/247 (13%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGG--NSAGPGDAVVNVYINHE 79
Q Q TR ARR+Y+GG+PP A + F + +M G N A G VV+V I HE
Sbjct: 149 QTAYAQHTRQARRLYIGGIPPGAINSDVQRFLNDLMLNSGAAINPAA-GPPVVDVKIQHE 207
Query: 80 KKFAFVEMRTVEEASNAMALDGIIF--EGVAVRVRRPTDYNPTLAAAL--------GP-- 127
K F F E ++A +A+ DG+++ G +RV RP DY+P+ + GP
Sbjct: 208 KGFGFAEFTNCDDAQSALMFDGVVYGDTGRKIRVNRPRDYDPSKNPVVIRDGLQIEGPKG 267
Query: 128 ---------GQPSPNLNLAAVGLASGAIG--------GAEGPDRVFVGGLPYYFTETQIK 170
P P A+ + +GP++++VGG TE Q +
Sbjct: 268 IGLLGEKQANAPPPWPEDLAIPAPPPLVSEWPKLPKRTPDGPNKLYVGGFDPLHTEGQTR 327
Query: 171 ELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
++L++ G L F ++ D G + G+ FC + DP +T +A AL G + + +RA
Sbjct: 328 QVLQAIGELKSFCVMPDA-RGRNTGHVFCEFADPRLTVVAEEALTGAWCFRQPIVCKRAM 386
Query: 231 ASSGQSK 237
+ +K
Sbjct: 387 PDAAPAK 393
>gi|108706080|gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 156/343 (45%), Gaps = 43/343 (12%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQ-VMTAIGGNSAGPGDAVVNVYINHEKK 81
V QATR RR+++ LP LA E + ++ ++++ + ++ IN +K+
Sbjct: 464 VQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKR 523
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
AFVE T E+A+ A++ DG F G ++++RRP +Y A + P +PS + L + +
Sbjct: 524 QAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEY--VEMAHVAPKKPSEEIKLISDVV 581
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
A+ P ++F+ G+ + + E++ SFG L + + + G + F Y
Sbjct: 582 -------ADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGGA--CAFLEY 632
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D ++T ACA LNG+K+G LT +S TEQ +A I A
Sbjct: 633 IDHSITSKACAGLNGMKLGGGILTAVNVFPNS----TEQ--AFNEASPFYGIPDSA---- 682
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADA--LADDEEYEEILEDMREECGKYGTLVNV- 318
SL E KVL L + L E EEILED+R EC ++G + ++
Sbjct: 683 --------KSLL-EEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVECARFGAVKSIN 733
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
V+ P + T G E C + +++GGN
Sbjct: 734 VVKYPASSDNTT---GDTITE------CEDGSTKIEPKEYGGN 767
>gi|296088195|emb|CBI35711.3| unnamed protein product [Vitis vinifera]
Length = 116
Score = 105 bits (263), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/69 (68%), Positives = 55/69 (79%)
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPED 371
+G LV+VVIPRP NG PGVGKVFLEY D G ++A+NALSGRKFGGN V+A YYPED
Sbjct: 48 HGALVHVVIPRPSPNGDLIPGVGKVFLEYSDTAGSSSARNALSGRKFGGNVVSAVYYPED 107
Query: 372 KYFNKDYSA 380
KY++ DY A
Sbjct: 108 KYYDGDYGA 116
>gi|189308116|gb|ACD86942.1| UAF-1 [Caenorhabditis brenneri]
Length = 108
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFL 338
+VLCL +T D L DE+YEEILED+REEC KYG + ++ IPRP + PGVGKVF+
Sbjct: 10 EVLCLMNMVTEDELKSDEDYEEILEDVREECSKYGIVRSLEIPRP-YDEHPVPGVGKVFV 68
Query: 339 EYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E+ C A+ AL+GRKF TV YY DKY N+ +
Sbjct: 69 EFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQF 108
>gi|209878476|ref|XP_002140679.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556285|gb|EEA06330.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 577
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 164/365 (44%), Gaps = 22/365 (6%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEE 92
R VYVG LP + F +Q + N PG+ V+ +I+ + K+AF E R++EE
Sbjct: 183 REVYVGNLPSGIGTTTLLEFMNQFLIK-NCNITTPGNPFVSAWISSDGKYAFCECRSMEE 241
Query: 93 ASNAMALDGII-FEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAE- 150
A+ A+ L+ I G +R+ RP + + ++ + + + +
Sbjct: 242 ANMALQLNNTINLNGNILRIGRPKTIENSSNINSSNEPNNSVVSSISTQSNTTFLSNIQP 301
Query: 151 ---GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLV-------KDR-DTGNSKGYGFC 199
DR+ + G PY +++ I++++ L+ K R ++ N C
Sbjct: 302 IIKKADRIVISGFPYSYSDEDIEDIIREVNGNQAIKLLYVPPNSNKGRIESSNCLKIAIC 361
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
++D +T+ +N + + L R+ + Q+K ++L+ I ++
Sbjct: 362 EFEDVVITERVIRRVNTQNVCNLKLNAFRS-HEALQNKYIL-NVLSDEIHKIYDYEVKQL 419
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+S + + + L G+ + + ++ IT + L D Y EI++++++E KYG + ++V
Sbjct: 420 SSDYSEISTFL-LRGQIPCRCIKISNIITPEELVVDNIYNEIMDEIKQEVCKYGNIKHIV 478
Query: 320 IPRP-----DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
IPRP ++ G G VF+ Y D AK L KF G +V YYPE+ +
Sbjct: 479 IPRPASAFKSEDSGYFSIYGSVFVLYNDVQNAIDAKINLYKMKFSGRSVCISYYPENYFI 538
Query: 375 NKDYS 379
++S
Sbjct: 539 QNNFS 543
>gi|358417046|ref|XP_001256277.3| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Bos taurus]
Length = 330
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQD 194
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K FAF+E R+V+E + AMA DGIIF+G ++++RRP DY P + P P L
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVP--GLCRP 252
Query: 140 GLASGAIGGAEG 151
G G+ G G
Sbjct: 253 GQCLGSKGSCRG 264
>gi|357114131|ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840355 [Brachypodium
distachyon]
Length = 840
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 41/304 (13%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQ----AIATFFSQVMTAIGGNSAGPGDAVVNVYINH 78
V QATR RR+++ LP A+E + FF S P ++ IN
Sbjct: 327 VQLTQATRPLRRLHIENLPSSASEDMLIGCLNDFFLSSDVNHIQKSKQP---CLSCTINK 383
Query: 79 EKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAA 138
EK AFVE T E+A+ A++ DG F G A+++RRP +Y + P +
Sbjct: 384 EKHQAFVEFLTPEDATAALSFDGRSFNGSALKIRRPKEY-------IEMANVVPKKTVEE 436
Query: 139 VGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF 198
+ LAS A+ P ++FV G+ + + E++ SFG L + +D + + + F
Sbjct: 437 IKLASDV---ADSPHKIFVAGISGVISSEMLMEIVSSFGQLAAYRF-QDHEALSGR-CAF 491
Query: 199 CVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMAL 258
Y D ++TD ACA LNG+K+G LT + + ++ E
Sbjct: 492 LEYIDHSITDKACAGLNGMKLGGCILTAVQVFPNPLEACNE------------------- 532
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADA--LADDEEYEEILEDMREECGKYGTLV 316
S ++ + E +VL L + L E EEI+ED+R EC ++G +
Sbjct: 533 -ASPFYSIPDSAKMLLEAPTEVLQLKNVFDREEYLLLSKSELEEIMEDIRMECARFGAVK 591
Query: 317 NVVI 320
++ I
Sbjct: 592 SINI 595
>gi|108706079|gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 155/343 (45%), Gaps = 43/343 (12%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQ-VMTAIGGNSAGPGDAVVNVYINHEKK 81
V QATR RR+++ LP LA E + ++ ++++ + ++ IN +K+
Sbjct: 464 VQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKR 523
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
AFVE T E+A+ A++ DG F G ++++RRP +Y A + P +PS + L + +
Sbjct: 524 QAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEY--VEMAHVAPKKPSEEIKLISDVV 581
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
A+ P ++F+ G+ + + E++ SFG L + + + G + F Y
Sbjct: 582 -------ADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGGA--CAFLEY 632
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D ++T ACA LNG+K+G LT +S TEQ +A I A
Sbjct: 633 IDHSITSKACAGLNGMKLGGGILTAVNVFPNS----TEQ--AFNEASPFYGIPDSA---- 682
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADA--LADDEEYEEILEDMREECGKYGTLVNV- 318
SL E KVL L + L E EEILED+R E ++G + ++
Sbjct: 683 --------KSLL-EEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVEYDRFGAVKSIN 733
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
V+ P + T G E C + +++GGN
Sbjct: 734 VVKYPASSDNTT---GDTITE------CEDGSTKIEPKEYGGN 767
>gi|413956976|gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
Length = 635
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 36/313 (11%)
Query: 11 TQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDA 70
T L L V QATR RR+++ LP A E + + + + G
Sbjct: 112 TMLAGNSLTADSVQLTQATRPLRRLHIENLPDSATEDKLIDCLNDFLLSTGSKLQR-SKP 170
Query: 71 VVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP 130
++ IN EK+ AFVE T E+A+ A++ DG G +R+RRP +Y T+ +
Sbjct: 171 CLSCTINREKRQAFVEFLTPEDATAAISFDGRSLNGSVLRIRRPKEYVETVNVTPKKAE- 229
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
L S + A+ P ++F+ G+ + + E++ +FG L + + + +
Sbjct: 230 -------ETALISDVV--ADSPYKIFIAGIAGVISSKMLMEIVSAFGPLAAYRFLFNNEL 280
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
G F Y D +VT ACA LNG+ +G + LT ++ H
Sbjct: 281 GGP--CAFLEYADRSVTSKACAGLNGMMLGGRVLT----------------AVHVFPNPH 322
Query: 251 IAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADA--LADDEEYEEILEDMREE 308
+ + A + S + L + KVL L + L E EE LED+R E
Sbjct: 323 V---EAANEASPFYGIPDNAKLLLKEPTKVLQLKNVFEREEYMLLSKSELEETLEDVRVE 379
Query: 309 CGKYGTL--VNVV 319
C ++G + VNVV
Sbjct: 380 CTRFGAVKSVNVV 392
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 156/350 (44%), Gaps = 34/350 (9%)
Query: 31 HARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTV 90
AR V+V L + + FF +G + V + K +VE++T+
Sbjct: 101 EARSVFVSQLAARLTARDLGYFFED---KLGEGTVMDARIVTDRLSRRSKGIGYVELKTI 157
Query: 91 EEASNAMALDGIIFEGVAVRVRR-PTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
E A+ L G + G+ ++V+ + N T A G G +LNL + G
Sbjct: 158 ELVDQAINLSGTVVMGLPIKVQHTEAERNRTHA---GDG----SLNLPP------GVSGT 204
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
GP +++VG L + TE+ IK++ E FG L DL +D TG SKGY F Y+ +
Sbjct: 205 HGPRQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYCFIQYKRAEDAKM 264
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKTEQESI------LAQAQQHIAIQKMA-LQTSG 262
A + G ++ +TL V T+QES+ L A + +QK+A ++ +
Sbjct: 265 ALEQMEGFELAGRTLRVNTVHEKGTVKYTQQESLEENGGNLNAASRQALMQKLARIEPAR 324
Query: 263 MNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEIL-EDMREEC-GKYGTLVNVVI 320
+ +TL L + + A ++++++ L +D++ EC KYG + + +
Sbjct: 325 APVETVSKPVITQTLQSKSVLLKNMFDPAEETEKDWDKDLADDVKVECENKYGMVNFIKV 384
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
+ Q G++++++ A L+GR FGG V A + P+
Sbjct: 385 DKESQ--------GEIYVKFDTVDSAKKAIEGLNGRYFGGRQVTATFIPD 426
>gi|312085420|ref|XP_003144672.1| U2af splicing factor protein 1 [Loa loa]
Length = 143
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFL 338
+VLCL +T D L DDEEYE+ILED+REEC KYG + ++ IPR G + GVGKVF+
Sbjct: 45 EVLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKSLEIPR-SVPGVDVTGVGKVFV 103
Query: 339 EYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E+ C A+ AL+GRKF TV YY D Y + +
Sbjct: 104 EFNSKQECQKAQAALTGRKFANRTVVTSYYDPDMYHRRQF 143
>gi|432090458|gb|ELK23883.1| Splicing factor U2AF 65 kDa subunit [Myotis davidii]
Length = 423
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Query: 130 PSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRD 189
P+P + + G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD
Sbjct: 241 PTPIEDRSGHGVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSA 298
Query: 190 TGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
TG SKGY FC Y D VTD A A LNG+++GDK L V+RA+
Sbjct: 299 TGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS 339
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 17/108 (15%)
Query: 52 FFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRV 111
FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+E + AMA G ++++
Sbjct: 4 FFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-------GQSLKI 55
Query: 112 RRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGG 159
RRP DY P PG S N ++ G+ S + + ++F+GG
Sbjct: 56 RRPHDYQPL------PGM-SENPSVYVPGVVSTVV--PDSAHKLFIGG 94
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 309 CGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
C KYG + ++ IPRP +G E PG GK+F+E+ C A L+GRKF V
Sbjct: 362 CSKYGLVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAVKGLTGRKFANRVV 415
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 45/366 (12%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P P ++ AR V+V L + + FF +G NS V +
Sbjct: 119 PSDPYMDEPKEDDSEARSVFVSQLAARMTARDLGYFFED---KLGDNSVLDVRIVTDRIS 175
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRR-PTDYNPTLAAALGPGQPSPNLN 135
K A+VE ++E A++L G I G+ + ++ + N T A G S NL
Sbjct: 176 RRSKGIAYVEFGSIELVDKAISLTGTIVMGLPIMIQHTEAERNKTHA-----GDGSINLP 230
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
A G GA ++VG L + TE+ IK++ E FG L DL KD TG SKG
Sbjct: 231 PGASG--RGAT--------LYVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKG 280
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSK-TEQESI-------LAQA 247
Y F Y+ +A + G ++ +TL V GQ++ + Q+S+ L A
Sbjct: 281 YAFIHYKRAEDAKMALEQMEGFELAGRTLRV-NTVHEKGQTRISTQDSLDESGGGNLNAA 339
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE-----EIL 302
+ +QK+A S T + T+A+ + + + +EE E ++
Sbjct: 340 SRQALMQKLARIDSAPVTQ---QPIMKPTVAQPMTSKSVLMRNMFDPEEETEPAWDKDLA 396
Query: 303 EDMREEC-GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
ED++ EC KYG + ++ + E G++++++ A N L+GR FGG
Sbjct: 397 EDVKTECQAKYGRVQHIKV--------EKDSEGEIYVQFDTVDAAKAAINGLNGRWFGGK 448
Query: 362 TVNAFY 367
++A +
Sbjct: 449 QISATF 454
>gi|313244755|emb|CBY15469.1| unnamed protein product [Oikopleura dioica]
Length = 2588
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 171/413 (41%), Gaps = 86/413 (20%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVY---INH 78
Q+ Q+A ++YVG + E I F + GP ++ Y N
Sbjct: 2208 QLQRQRAVAIMCKIYVGSIYYEIGEATIRQSFE---------TFGPVRSIDMSYDQGTNR 2258
Query: 79 EKKFAFVEMRTVEEASNAMA-LDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA 137
K F F+E E A A+ + I G AV+V R ++ GQ + +A
Sbjct: 2259 HKGFCFLEFECPEAAFLALEHMQSITIGGRAVKVGRLSNI----------GQVAAQHFIA 2308
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
G A RV++ + +T IK + ESFG + LVK+ DTG K YG
Sbjct: 2309 QFG------NEAAKYHRVYIANIHVNIVDTDIKAVFESFGRVLSCQLVKNVDTGRHKNYG 2362
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV------------------RRATASSGQSKTE 239
F Y + A +A+NG +G + + V +TA SG +K
Sbjct: 2363 FVEYDNSQSMKEAISAMNGFDLGGQCIRVGPCVVPPSMHNIPTVAPGNASTALSG-AKAV 2421
Query: 240 QESILAQAQQHIAIQK-----------MALQT--------------SGMNTLGGG----- 269
QE +L + ++ + + +A++ SG + GG
Sbjct: 2422 QE-MLKKKKKDSGVNRPSPPKDSMADVLAIREELNKKARNPTCDDDSGQMKITGGAQRNM 2480
Query: 270 -MSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP-DQNG 327
M + V+ L ++AD L DEE E ++ +EC +YG ++ VVI + D+
Sbjct: 2481 IMRKLMTRRSNVVVLKNMLSADDL--DEEVES---EVTQECSQYGNVLRVVIYQEVDRLA 2535
Query: 328 GETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYSA 380
+ KVF+++ DA G TAK LSGR F G +NA Y E + KDYSA
Sbjct: 2536 PGCEPIVKVFVQFTDADGAETAKKELSGRFFAGRKINAQSYDETAFEMKDYSA 2588
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 148/349 (42%), Gaps = 40/349 (11%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G + V + K +VE R+++
Sbjct: 29 ARSVFVSQLAARLTARDLGYFFED---KLGEGTVLDSRIVTDRISRRSKGIGYVEFRSID 85
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
A+ L G + G+ + V+ + L PG NLNL + G
Sbjct: 86 LVEKALGLSGTVVMGLPIMVQ----LTESERNRLHPG--DGNLNLPP------GVHAPHG 133
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
+++VG L + TE IK++ E FG L DL +D TG SKGY F Y+ P +A
Sbjct: 134 AMQLYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTGRSKGYAFVQYKRPEDAKMAL 193
Query: 212 AALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQAQQHIAIQKMALQTSGMN 264
++G ++ +TL V T+Q+S+ L A + +QK+A +
Sbjct: 194 EQMDGFELAGRTLRVNTVHEKGTARYTQQDSLEETGGGNLNAASRQALMQKLAR----IE 249
Query: 265 TLGGGMSLFGETLAKVLCLTEAITADALADDEEYE-----EILEDMREECG-KYGTLVNV 318
T + ++ + + + + +EE E E+ ED++ EC KYG + +
Sbjct: 250 TPTPAEPVSRPSIPQAMQSRSVLMKNMFDPEEETERDWDKELAEDVKGECQEKYGKVEAI 309
Query: 319 VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ + Q G++++++ A AL+GR FGG ++A +
Sbjct: 310 KVEKETQ--------GEIYVKFATIDSAKEAVQALNGRWFGGRQISAVF 350
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 150/355 (42%), Gaps = 50/355 (14%)
Query: 31 HARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTV 90
AR V+V L + + FF +G + V + K +VE RT+
Sbjct: 116 EARSVFVSQLAARLTARDLGYFFED---KLGEGTVMDSRIVTDRLSRRSKGIGYVEFRTI 172
Query: 91 EEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAE 150
+ A+AL G + G+ + V+ + L PG S NL V + GAI
Sbjct: 173 DHVEKALALSGTVVMGLPIMVQ----LTESERNKLHPGDGSLNLP-PGVTASHGAI---- 223
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
++VG L + TE+ IK++ E FG L DL +D TG SKGY F Y+ +A
Sbjct: 224 ----LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMA 279
Query: 211 CAALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQAQQHIAIQKMALQTSGM 263
+ G ++ +TL V T+Q+S+ L A + +QK+A +T
Sbjct: 280 LEQMEGFELAGRTLRVNTVHEKGTARYTQQDSLDEAGGGNLNAASRQALMQKLA-RTEAP 338
Query: 264 NTLGGGMSLFGETLAK-----VLCLTEAITADALADDEEYE-----EILEDMREEC-GKY 312
T F E +A+ + + + +EE E E+ +D++ EC KY
Sbjct: 339 PT-------FTEPVARPNIPQAMQSRSVLLKNMFDPEEETERDWDKELADDVKVECENKY 391
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
G + + + R Q G+++L++ A L+GR FGG V+A +
Sbjct: 392 GKVEAIKVERETQ--------GEIYLKFDSIESAKQAIQGLNGRWFGGRQVSAAF 438
>gi|5822501|pdb|2U2F|A Chain A, Solution Structure Of The Second Rna-Binding Domain Of
Hu2af65
Length = 85
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 56/77 (72%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC Y D VTD A A
Sbjct: 3 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAG 62
Query: 214 LNGLKMGDKTLTVRRAT 230
LNG+++GDK L V+RA+
Sbjct: 63 LNGMQLGDKKLLVQRAS 79
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 147/346 (42%), Gaps = 33/346 (9%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G S V + K +VE RTVE
Sbjct: 12 ARSVFVSQLAARLTARDLGYFFED---KLGEGSVMDSRIVTDRISRRSKGIGYVEFRTVE 68
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
A+ L G + G+ ++++ + L PG NLNL + G
Sbjct: 69 LVDRAIGLSGTVVMGLPIQIQ----HTEAERNRLHPG--DGNLNLPP------GVSAPHG 116
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
+++VG L + TE+ IK++ E FG L DL +D TG SKGY F Y+ +A
Sbjct: 117 GMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMAL 176
Query: 212 AALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQAQQHIAIQKMALQTSGMN 264
+ G ++ +TL V T+Q+++ L A + +QK+A S
Sbjct: 177 EQMEGFELAGRTLRVNTVHEKGSTRYTQQDTLDEAGGGNLNAASRQALMQKLARTDSAPV 236
Query: 265 TLGG-GMSLFGETL-AKVLCLTEAITADALADDEEYEEILEDMREECG-KYGTLVNVVIP 321
L +T+ ++ + L + + + +++ +D++ EC KYG + + +
Sbjct: 237 KLEPVARPHIPQTMQSRSVLLKNMFNPEEETERDWDKDLADDVKSECATKYGPVQAIKVE 296
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ ET G V E DA G A L+GR FGG ++A +
Sbjct: 297 K------ETQGEIYVLFETVDAAGQAI--EGLNGRWFGGRQISAAF 334
>gi|108706082|gb|ABF93877.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 720
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 12/204 (5%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQ-VMTAIGGNSAGPGDAVVNVYINHEKK 81
V QATR RR+++ LP LA E + ++ ++++ + ++ IN +K+
Sbjct: 464 VQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKR 523
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
AFVE T E+A+ A++ DG F G ++++RRP +Y A + P +PS + L + +
Sbjct: 524 QAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEY--VEMAHVAPKKPSEEIKLISDVV 581
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
A+ P ++F+ G+ + + E++ SFG L + + + G F Y
Sbjct: 582 -------ADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGG--ACAFLEY 632
Query: 202 QDPAVTDIACAALNGLKMGDKTLT 225
D ++T ACA LNG+K+G LT
Sbjct: 633 IDHSITSKACAGLNGMKLGGGILT 656
>gi|403362995|gb|EJY81233.1| hypothetical protein OXYTRI_21372 [Oxytricha trifallax]
Length = 411
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 151/389 (38%), Gaps = 92/389 (23%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
+H R++YVG LPP Q + + + + N PG +++ +I+ + +AFVE RT
Sbjct: 70 KHERQLYVGNLPPTITHQKLVELLNIAVCVMKLN-VKPGQPILSAWISQDGHYAFVEFRT 128
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
+EE N L+ I +G ++V + T + + P N V + S A+ +
Sbjct: 129 IEECMNGHQLNQIAIQGHPLKVGK-TRIQNQINSQNPHNFPCQNSANQQVLMLSQALSNS 187
Query: 150 EGPDRVFVGGLPYYF---TETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
+ + +P ++ TE +K LL+ FG + + ++ +C Y+
Sbjct: 188 -----IEISNIPKFYENDTEALVK-LLKMFGVYRQYQM----KALQNQIICYCEYESDEQ 237
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
T A N L + + L VRR
Sbjct: 238 TKKALNGFNDLLVKESKLQVRRLPN----------------------------------- 262
Query: 267 GGGMSLFGETLAKVLCLTEAITADALADDE----------------------EYEEILED 304
G +FG T AK + + I + + DE E+ E+ +D
Sbjct: 263 GHASQIFGSTTAKSI---DCIQGNQKSSDEPRSSRVVVLNNLLVLENMKTKQEFYEVEDD 319
Query: 305 MREECGKYGTLVNVVIPRPDQ--NGGETP---------------GVGKVFLEYYDAVGCA 347
+REEC KYG + V+IP+P + + P G GK+++++ +
Sbjct: 320 IREECEKYGKIRQVMIPKPSHLSHRQKLPFCIQIQRYGSYLVNEGAGKIYIKFDKSEQAK 379
Query: 348 TAKNALSGRKFGGNTVNAFYYPEDKYFNK 376
++ R + V A Y EDK++++
Sbjct: 380 KCVEQMNKRLYNQREVIASLYSEDKWYDR 408
>gi|108706081|gb|ABF93876.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 704
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 12/204 (5%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQ-VMTAIGGNSAGPGDAVVNVYINHEKK 81
V QATR RR+++ LP LA E + ++ ++++ + ++ IN +K+
Sbjct: 464 VQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKR 523
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
AFVE T E+A+ A++ DG F G ++++RRP +Y A + P +PS + L + +
Sbjct: 524 QAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEY--VEMAHVAPKKPSEEIKLISDVV 581
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
A+ P ++F+ G+ + + E++ SFG L + + + G + F Y
Sbjct: 582 -------ADSPHKIFIAGISGVISSEMLMEIVSSFGPLAAYRFLFNEYLGGA--CAFLEY 632
Query: 202 QDPAVTDIACAALNGLKMGDKTLT 225
D ++T ACA LNG+K+G LT
Sbjct: 633 IDHSITSKACAGLNGMKLGGGILT 656
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 149/350 (42%), Gaps = 41/350 (11%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G N+ V + K +VE R+VE
Sbjct: 292 ARSVFVSQLAARLTARDLGYFFED---KLGENTVMDSRIVTDRISRRSKGIGYVEFRSVE 348
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
A+AL G + G+ ++++ + L PG NLNL + G
Sbjct: 349 LVDKAIALSGTVVMGLPIQIQ----HTEAERNRLHPG--DGNLNLPP------GVSAPHG 396
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
+++VG L + +E+ IK++ E FG L DL +D TG SKGY F Y+ +A
Sbjct: 397 GMQLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMAL 456
Query: 212 AALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQAQQHIAIQKMALQTSGMN 264
++G ++ +TL V T+Q+S+ L A + +QK+A ++
Sbjct: 457 EQMDGFELAGRTLRVNTVHEKGSARYTQQDSLDEAGGGNLNAASRQALMQKLAR----ID 512
Query: 265 TLGGGMSLFGE-TLAKVLCLTEAITADALADDEEYE-----EILEDMREEC-GKYGTLVN 317
M + + + + + +EE E ++ ED++ EC KYG ++
Sbjct: 513 PTPAKMEPIARPNIPQTMQSRSVLMKNMFNPEEETERDWDKDLAEDVKGECESKYGRVLA 572
Query: 318 VVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ + + Q G++++++ A L+GR FGG + A +
Sbjct: 573 IKVEKESQ--------GEIYVKFETVDAAKNAIEGLNGRWFGGRQITAAF 614
>gi|297823139|ref|XP_002879452.1| hypothetical protein ARALYDRAFT_321074 [Arabidopsis lyrata subsp.
lyrata]
gi|297325291|gb|EFH55711.1| hypothetical protein ARALYDRAFT_321074 [Arabidopsis lyrata subsp.
lyrata]
Length = 497
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 142/353 (40%), Gaps = 73/353 (20%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V ++TR RR+Y +P A+E+++ F+ M + G N + ++ IN EK
Sbjct: 209 VQLTESTRPMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGSEPCISCIINKEKSQ 268
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
A VE T ++AS A++LDG F G +++RRP DY VG
Sbjct: 269 ALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDY---------------------VG-- 305
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
T + E++ FG L + V + D Y Y
Sbjct: 306 ------------------------TTLMEIVSVFGPLKAYRFVSNNDLNQQCAY--LEYT 339
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
D +VT ACA LNG+K+G +T A + +A+ +
Sbjct: 340 DGSVTLKACAGLNGMKLGGSVITAVCAFPDASS---------------VAVNE---NPPF 381
Query: 263 MNTLGGGMSLFGETLAKVLCLTEAITAD--ALADDEEYEEILEDMREECGKYGTLVNVVI 320
G L G+ +L L + + L ++E +EIL+D+R EC ++ T +
Sbjct: 382 YGIPGHAKPLLGKP-KHILKLKNVVDPEDFTLLSEQEVKEILDDVRLECARWDTDDKMEE 440
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
R D + PG +F+EY A ++L GR + V A Y ++ Y
Sbjct: 441 ER-DPDDLFEPGC--IFIEYGRPEATCDAAHSLHGRLYDNRIVKAEYVSKELY 490
>gi|242037001|ref|XP_002465895.1| hypothetical protein SORBIDRAFT_01g047730 [Sorghum bicolor]
gi|241919749|gb|EER92893.1| hypothetical protein SORBIDRAFT_01g047730 [Sorghum bicolor]
Length = 969
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 141/331 (42%), Gaps = 49/331 (14%)
Query: 6 LPFGATQLGAFPLMPVQVMT------------QQATRHARRVYVGGLPPLANEQAIATFF 53
+PF + + P V+ M QATR RR+++ LP A E +
Sbjct: 434 IPFSFSTIKKDPSTTVETMLVGNSLTADSVQLTQATRPLRRLHIENLPDSATEDKLIDCL 493
Query: 54 SQVM--TAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRV 111
+ + T I + P ++ IN EK+ AFVE T E+A+ A++ DG G +R+
Sbjct: 494 NDFLLPTGIKPQRSKP---CLSCTINREKRQAFVEFLTPEDATAALSFDGRSLNGSTLRI 550
Query: 112 RRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKE 171
RRP +Y T+ + P +P+ L S + A+ P ++F+ G+ + + E
Sbjct: 551 RRPKEYVETV--NVTPKKPA-----EETALISDVV--ADSPHKIFIAGIAGVISSEMLME 601
Query: 172 LLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
++ +FG L + + + + G F Y D ++T ACA LNG+ +G LT
Sbjct: 602 IVSAFGPLAAYRFLFNSELGGP--CAFLEYADRSITSKACAGLNGMMLGGCVLT------ 653
Query: 232 SSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADA 291
++ + A G+ SL E KVL L +
Sbjct: 654 ----------AVHVFPNPPVEAANEASPFYGIPE--NAKSLLKEP-TKVLQLKNTFEREE 700
Query: 292 --LADDEEYEEILEDMREECGKYGTLVNVVI 320
L E EE LED+R EC ++G + +V +
Sbjct: 701 YMLLSKSELEETLEDVRVECTRFGAVKSVHV 731
>gi|68076889|ref|XP_680364.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56501286|emb|CAI04220.1| conserved hypothetical protein [Plasmodium berghei]
Length = 652
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 151/333 (45%), Gaps = 49/333 (14%)
Query: 8 FGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
FG ++LG + + A + AR +YVG +P + Q I F + + +
Sbjct: 195 FGISELG------LSTIDANAEKTARELYVGNIPQNIDIQEIVKFLNTCLLILYNKENEN 248
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPT----DYNPTLAA 123
+ + I + ++AFVE R++++ SN M L+GI F +R+ RP +Y +
Sbjct: 249 ENICLKACIRGDTRYAFVEFRSLQDTSNCMLLNGIYFYTNNLRIGRPKTFPIEYTKLIPP 308
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPD--------------RVFVGGLPYYFTETQI 169
A P + L+ +G+ + AI + ++ V + +I
Sbjct: 309 ATIPTIDTYYLSQGLIGIKAFAIFHQNKDETKNEYIPVDMIKLQKLCVSNISKNNETNKI 368
Query: 170 KELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRA 229
KELLE+FG + GF+ + + NS Y C+ + V + A+ K+ + +
Sbjct: 369 KELLEAFGEIQGFEFFEGEE--NSDTY-ICLVEYNNVEN----AIQAHKI------LNQN 415
Query: 230 TASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETL-AKVLCLTEAIT 288
T+ Q + E IL + ++K +Q S+ + + KV+ L++ T
Sbjct: 416 TSYKIQFEYE---ILNDPIINQLVKKKYMQNKN--------SILSQQIPTKVIVLSKIAT 464
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
+ L++ E+Y+EI ED++ EC KYG ++ VV+P
Sbjct: 465 FEELSNPEDYKEISEDIKIECEKYGPVLEVVLP 497
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 324 DQNGGETPGVGKVFLEYYDAVGCA-----------TAKNALSGRKFGGNTVNAFYYPEDK 372
+ N ETP + Y ++GCA + LSGR+FG N + A YY E K
Sbjct: 554 NNNQEETPDKIEEHPYYLSSIGCAFIYFETIEGATKTRKELSGRRFGANIIEANYYSEKK 613
Query: 373 YFNKDY 378
+ K++
Sbjct: 614 FLMKNF 619
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 37/353 (10%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G + V + K +VE + ++
Sbjct: 64 ARSVFVSQLAARLTARDLGYFFED---KLGEGAVRDARIVTDRLSRRSKGIGYVEFKNID 120
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
+ A+AL G I G+ + ++ + +GP +++ L G G
Sbjct: 121 LVNKAIALSGTIVMGLPIMIQ----LTESERNKIGPS--------SSLHLPPGVSHPHAG 168
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
+++VG L + TE+ I+++ E FG L DL +D TG SKGY F Y+ P +A
Sbjct: 169 SMQLYVGSLHFNLTESDIRQVFEPFGELDFVDLHRDPATGKSKGYCFIQYKRPEDARMAL 228
Query: 212 AALNGLKMGDKTL-----------TVRRATASSGQSKTEQESILAQAQQHIAIQKMAL-- 258
+ G ++ + L TVR +TA + + +H +QK+A
Sbjct: 229 EQMEGFELAGRQLRVNTVHDKGQGTVRISTAPQDSLEDTGGVLNNSTSRHQLMQKLARTE 288
Query: 259 QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC-GKYGTLVN 317
Q S NT+ ++ ++ + L D + + +++ +D+R EC KYG +++
Sbjct: 289 QPSKNNTMLMKSNIPQTLSSRCVLLRNMFDPDEETERDWDKDLADDVRGECEEKYGKVLD 348
Query: 318 VVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
+ + E G++++++ A L+GR FGG V A P+
Sbjct: 349 LKV--------EKESEGEIYIKFESVESAEKAIKGLNGRWFGGKQVTASPIPD 393
>gi|359477752|ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266510 [Vitis vinifera]
Length = 895
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 146/360 (40%), Gaps = 108/360 (30%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
+ QATR RR+YV LP ++E+A+ + + + G N ++ I+ EK
Sbjct: 430 IQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCISCIIHKEKGQ 489
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
A VE T E+AS A++ DGI F G +++RRP D+
Sbjct: 490 ALVEFLTPEDASAALSFDGISFSGSILKIRRPKDF------------------------- 524
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
+ E+ +FG L + + D G + F Y
Sbjct: 525 --------------------------LMEIAAAFGPLKAYRFQVNEDLG--EPCAFLEYV 556
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
D +VT ACA LNG+K+G + LTV +A ++ +A++ +
Sbjct: 557 DQSVTLKACAGLNGMKLGGQVLTVVQAIPNA----------------------LAMENT- 593
Query: 263 MNTLGGGMSLFG---------ETLAKVLCLTEAITADALA--DDEEYEEILEDMREECGK 311
G + +G E +VL L + D L+ + E EEILED+R EC +
Sbjct: 594 -----GNLPFYGIPEHAKPLLERPTQVLKLKNVVNPDDLSSLSEAELEEILEDIRLECTR 648
Query: 312 YGTLVNVVIPRPDQNGGETPGVGKVFLEYYDA-------VGCATAKNALSGRKFGGNTVN 364
+GT+ +V I + + + T LE Y+A +GC N++ GG T N
Sbjct: 649 FGTVKSVNIVKYNNSHVST-------LEVYEAADNTGSNLGCDG--NSMKAETLGGGTDN 699
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 158/367 (43%), Gaps = 47/367 (12%)
Query: 26 QQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFV 85
++A R V V L A+E+ I FS+ V ++ K A+V
Sbjct: 164 EEAQRADLTVLVINLSLSADERDIYELFSE-----HAGKVRDIQCVRDLRSGKSKGIAYV 218
Query: 86 EMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL-AAVGLASG 144
E T E A+++ G+ +G ++++ Q N AA L
Sbjct: 219 EFYTQESVIKALSMTGLDLKGQRIKIQ--------------SSQAEKNRAAKAAKMLQQT 264
Query: 145 AIGGAEGPDRVFVGGLP---YYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
A+ ++ P ++VGGL E ++K+L FGT+ ++ +D +TG SKGY F +
Sbjct: 265 AMDASDSPFTIYVGGLIGALSALNEVELKQLFSPFGTIIDVEIFRDPETGESKGYAFLKF 324
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI---------- 251
+ + A +NG +G + + V A ++ SK+ S+ + +
Sbjct: 325 RRSSEAKEAMNTMNGFDIGGQQIKVGYANLNTTDSKSRLSSLGDVDIERLDDDGGGLISG 384
Query: 252 AIQKMALQTSGMNTLGGGMS-LFGETLA----KVLCLTEAITADALADDEE--YEEILED 304
A K+AL T +S F A + L+ TA+ DE + EI ED
Sbjct: 385 ATNKIALMEKLQRTTAAPISATFSSGKASGPTSNIILSNMFTANDPGADEPNFFVEIEED 444
Query: 305 MREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVN 364
++EEC KYG +V V + + + GKV++++ ++ +TA L+GR F GNT+
Sbjct: 445 VKEECEKYGKVVAVYLNKKTID-------GKVWVKFQNSTDASTAYKGLNGRYFAGNTIK 497
Query: 365 AFYYPED 371
Y +D
Sbjct: 498 VEYVTDD 504
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 115/267 (43%), Gaps = 46/267 (17%)
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
G+ GP R++VG L + TE ++ + E FG + G L+ D +TG SKGYGF + D
Sbjct: 239 GSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECA 298
Query: 208 DIACAALNGLKMGDKTLTVRRATASSGQS-------------------KTEQESILAQAQ 248
A LNG ++ + + V T S S T + ++A+
Sbjct: 299 KKALEQLNGFELAGRPMKVGHVTERSDSSTASSILDNDELERTGIDLGTTGRLQLMARLA 358
Query: 249 QHIAIQ-----KMALQTSG---MNTLGG-----------GMSLFGETLA-KVLCLTEAIT 288
+ ++ + ALQ +G T+GG ++L + LA L L+
Sbjct: 359 EGTGLKIPPAAQQALQMTGSMSFPTIGGPPAVPTPSPSQALNLPAQPLATHCLQLSNLFN 418
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT 348
A D EI +D+ EEC K+G +V++ + D+N + G V+++
Sbjct: 419 PQAENDPSWAVEIQDDVIEECNKHGGVVHIYV---DKNSAQ----GNVYVKCPSIPAAMA 471
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKYFN 375
NAL GR F G + A Y P Y N
Sbjct: 472 TVNALHGRWFAGKMITAAYVPLPTYHN 498
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 115/267 (43%), Gaps = 46/267 (17%)
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
G+ GP R++VG L + TE ++ + E FG + G L+ D +TG SKGYGF + D
Sbjct: 222 GSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECA 281
Query: 208 DIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQE------------SILAQAQ 248
A LNG +K+G T +TASS E E ++A+
Sbjct: 282 KKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLA 341
Query: 249 QHIAIQ-----KMALQTSGMNTLGG--------------GMSLFGETLA-KVLCLTEAIT 288
+ ++ + ALQ +G GG ++L + LA L L+
Sbjct: 342 EGTGLKIPPAAQQALQMTGSIPFGGIGAPAAVPTPAPSQALNLPSQPLATHCLQLSNLFN 401
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT 348
A D EI +D+ EEC K+G +V++ + D+N + G V+++
Sbjct: 402 PQAENDPSWAAEIQDDVIEECNKHGGIVHIYV---DKNSPQ----GNVYVKCPSIPAAMA 454
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKYFN 375
NAL GR F G + A Y P Y N
Sbjct: 455 TVNALHGRWFAGKMITAAYVPLPTYHN 481
>gi|159163083|pdb|1U2F|A Chain A, Solution Structure Of The First Rna-Binding Domain Of
Hu2af65
Length = 90
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+
Sbjct: 1 ARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVD 59
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNP 119
E + AMA DGIIF+G ++++RRP DY P
Sbjct: 60 ETTQAMAFDGIIFQGQSLKIRRPHDYQP 87
>gi|82794077|ref|XP_728296.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484570|gb|EAA19861.1| KED [Plasmodium yoelii yoelii]
Length = 858
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 51/335 (15%)
Query: 8 FGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
FG +LG + + A + AR +YVG +P + Q I F + + +
Sbjct: 396 FGIPELG------LSTIDANAEKTARELYVGNIPQNIDIQEIVKFLNTCLLILYNKENEN 449
Query: 68 GDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPT----DYNPTLAA 123
+ + I + ++AFVE R++++ SN M L+GI F +R+ RP +Y +
Sbjct: 450 ENICLKACIRGDTRYAFVEFRSLQDTSNCMLLNGIYFYTNNLRIGRPKTFPIEYTKLIPP 509
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPD----------------RVFVGGLPYYFTET 167
A P + L+ VG+ + AI + ++ V +
Sbjct: 510 ATIPTIDTYYLSQGLVGIKAFAIFHQNKDENKNEYHHLPVDMIKLQKLCVSNISKNNETN 569
Query: 168 QIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 227
+IKELLE+FG + F+ + + NS Y C+ + + + A+ K+ +
Sbjct: 570 KIKELLEAFGDIQTFEFFEGEE--NSDTY-ICLVEYNNIEN----AIQAHKI------LN 616
Query: 228 RATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETL-AKVLCLTEA 286
+ T+ Q + E IL + ++K +Q S+ + + KV+ L++
Sbjct: 617 QNTSYKIQFEYE---ILNDPTINQLVKKKYMQNKN--------SILSQQIPTKVIVLSKI 665
Query: 287 ITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
T D L++ E+Y+EI ED++ EC KYG+++ VV+P
Sbjct: 666 ATFDELSNPEDYKEISEDIKIECEKYGSVIEVVLP 700
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+G F+ + G + LSGRKFG N + A YY E K+ K++
Sbjct: 779 SIGCAFIYFETIEGATKTRKELSGRKFGANIIEANYYSEKKFIMKNF 825
>gi|209879137|ref|XP_002141009.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556615|gb|EEA06660.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 442
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 164/424 (38%), Gaps = 94/424 (22%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVV-------------------- 72
R V V +P L N Q ++TF + A+ G A + +
Sbjct: 30 RTVIVEKVPMLFNSQTLSTFLCGAICALQGKPADSLNTFISSIKEITCEDAQLTVNDNNS 89
Query: 73 ---NVY------------INHEKKFAF-VEMRTVEEASNAMALDGIIFEGVAVRV--RRP 114
N+Y NH F VE++T+ + L+GI + ++ RRP
Sbjct: 90 TIHNIYSSNAGSKSGGSSFNHGISRTFRVELQTIIYTLLCLKLNGIPIGTSSSKLICRRP 149
Query: 115 TDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLE 174
+Y P G P + S I ++ + LP +E +++ LE
Sbjct: 150 KEYIPP-----PEGDPINTFQIVLDKPESKQIST----EKCILKDLPIDISEESLRKQLE 200
Query: 175 SFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSG 234
+ G + ++ D TG KG G ++D + A +G + V SSG
Sbjct: 201 TIGPIKTLVVIYDPITGVPKGVGSFEFEDSLNCNKAVEKFHGRPIEGTKNGVWNIQLSSG 260
Query: 235 QSKTEQESILAQAQQHIAIQKMALQTSG--------------------MNTLGGGMSL-- 272
ILA++ ++++ +L S + +L MS
Sbjct: 261 --------ILAKSNNNVSLNSTSLPISSTTPSNQASVISFITPREYKPVTSLTKSMSYKL 312
Query: 273 ---------------FGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVN 317
GET +KV+ L I + L DD+EY IL+ ++ E K+GT++
Sbjct: 313 LSSPIIGLILCASKKVGETPSKVVQLLNIIQPEELLDDQEYHSILDSVKTEAEKFGTILE 372
Query: 318 VVIPRP-DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG-NTVNAFYYPEDKYFN 375
+ PRP + G GK+F+ + D A+ L+GR F TV A ++P +KY N
Sbjct: 373 IFSPRPKSRENLYCNGAGKIFIYFADITSARRAQYQLNGRIFDHVKTVCASFFPLEKYLN 432
Query: 376 KDYS 379
++YS
Sbjct: 433 REYS 436
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 144/346 (41%), Gaps = 33/346 (9%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G S V + K +VE R+VE
Sbjct: 267 ARSVFVSQLAARLTARDLGYFFED---KLGEGSVMDSRIVTDRISRRSKGIGYVEFRSVE 323
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
A+ L G + G+ ++++ + L PG NLNL + G
Sbjct: 324 LVDKALGLSGTVVMGLPIQIQ----HTEAERNRLHPG--DGNLNLPP------GVSAPHG 371
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
+++VG L + TE+ IK++ E FG L DL +D TG SKGY F Y+ +A
Sbjct: 372 GMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMAL 431
Query: 212 AALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQAQQHIAIQKMALQTSGMN 264
+ G ++ +TL V +Q+S+ L A + +QK+A
Sbjct: 432 EQMEGFELAGRTLRVNTVHEKGTTKYAQQDSLDEAGGGNLNAASRQALMQKLARTDQPAV 491
Query: 265 TLG--GGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC-GKYGTLVNVVIP 321
L ++ ++ + L + + + +++ ED++ EC KYG + + +
Sbjct: 492 KLPPVTKPNIPQSMQSRSVLLKNMFNPEEETERDWDKDLAEDVKGECEDKYGKVEFIKVE 551
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
R Q G++++++ A L GR FGGN V+A +
Sbjct: 552 RESQ--------GEIYVKFDSIESAKNAIQGLHGRWFGGNQVSAAF 589
>gi|294876942|ref|XP_002767845.1| splicing factor u2af large subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239869760|gb|EER00563.1| splicing factor u2af large subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 220
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Query: 44 ANEQAIATFFSQVMTAIGGN--SAGPGDAVVNVYI---NHEKKFAFVEMRTVEEASNAMA 98
+++Q++ FF + A+ GN P VV+V+ + + A VE RT A+ AM
Sbjct: 16 SSQQSVMDFFKGALFAVTGNGGKTTPLHPVVSVFFLISDGHSRTALVEFRTPIAATVAMR 75
Query: 99 LDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPD-RVFV 157
L+GI +G + + RP YN + + + + + S A G + ++ +
Sbjct: 76 LNGIDLDGRKLAITRPHGYNKEDPSKSITAEDIQKVTIEELCGGSSTKKTAPGSNLQLGI 135
Query: 158 GGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGL 217
LP TET +++LLE FG L L++D+ TG SKGYGFC ++DP D AL+
Sbjct: 136 YHLPPVMTETYLRDLLEQFGALTMVSLIRDKTTGLSKGYGFCQFEDPNDADRCLYALDQF 195
Query: 218 KMGDKTLTVRRATASSGQ 235
+G+ +L+V R + Q
Sbjct: 196 VLGNYSLSVTRLVPDAQQ 213
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 134/314 (42%), Gaps = 56/314 (17%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE T E A+++ G+ +G +RV + AA AA
Sbjct: 359 KGIAYVEFYTQESVIKALSMTGMSMKGQGIRVH-SSQAEKNRAAK------------AAK 405
Query: 140 GLASGAIGGAEGPDRVFVG---GLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
L A+ ++ P + V G+ Y E ++ +L FG + L + D G SKGY
Sbjct: 406 QLQDNALKESDNPTTIVVSNLLGVLSYLNEIELNQLFSPFGNIIDVALAR-TDNGESKGY 464
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTV-----RRATASSGQS---------KTEQES 242
+ ++ A +NG + + + V R+ S S +
Sbjct: 465 AYIRFKRWNEAKEALNVMNGFDINGQQIKVAYANTRKDPKSRLHSLGDLDMERLDDDDAG 524
Query: 243 ILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEY-EEI 301
+++ + IA+ K Q +N+ L L+ T+ AD+ E+ +EI
Sbjct: 525 LISGSNVKIALMKKLQQRQPLNSSN-------------LVLSNMYTSADYADNHEFFDEI 571
Query: 302 LEDMREECGKYGTLVNVVIPR--PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
ED++EECGKYGT+V V + R PD GKV++++ + +A +L GR F
Sbjct: 572 EEDVKEECGKYGTVVQVFVNRRNPD---------GKVYVKFKNNDDAQSANKSLQGRYFA 622
Query: 360 GNTVNAFYYPEDKY 373
GNT+ Y +D+Y
Sbjct: 623 GNTIQVSYISDDQY 636
>gi|195996811|ref|XP_002108274.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
gi|190589050|gb|EDV29072.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
Length = 351
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 133/317 (41%), Gaps = 52/317 (16%)
Query: 78 HEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA 137
K A+VE R V+ A+ L+G EG+ + ++R Q N
Sbjct: 35 RSKGIAYVEFRLVDSVDKALKLNGTKVEGIPIMIQRT--------------QSEKN---- 76
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
+ +GP R+++G L Y E ++ + E FG + ++++D DT SKGYG
Sbjct: 77 KIAALQAQQKAQQGPTRLYIGSLHYNINEDMLRAIFEPFGLVENVNIIRDSDTNVSKGYG 136
Query: 198 FCVYQDPAVTDIACAALNGLKMGDK-----TLTVRRATASS----GQSKTEQESILAQAQ 248
F Y++P A LNGL++ + T+T R A S+ TE+ I +
Sbjct: 137 FIQYKEPDSARRALEQLNGLEVAGRPIKVGTVTDRSADLSAMSALDDDDTERGGIEMNSL 196
Query: 249 QHIAIQKMALQTSGMNTL----------------GGGMSLFGETLAKVLC-LTEAITADA 291
+A+ QT T+ G+ T+ C L + A
Sbjct: 197 SRVALMAKLSQTHNATTVPVSVPVPVPVPGPTLPATGLIPAANTVQASPCFLISNMFDPA 256
Query: 292 LADDEEYE-EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAK 350
D++++ +I +D+ EEC K+G + +V + + T G V+++ A A
Sbjct: 257 KETDQDWDLDIRDDIIEECNKHGNVYHVYVDK-------TSPKGIVYVKCQTIDVAARAV 309
Query: 351 NALSGRKFGGNTVNAFY 367
+L+GR F GN + A +
Sbjct: 310 KSLNGRWFAGNMITAQF 326
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 30/295 (10%)
Query: 81 KFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVG 140
+ +VE RTVE A+AL G + G+ ++++ + L PG NLNL
Sbjct: 337 RIGYVEFRTVELVDKAIALSGTVVMGLPIQIQ----HTEAERNRLHPG--DGNLNLPP-- 388
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+ + G +++VG L + TE+ IK++ E FG L DL +D TG SKGY F
Sbjct: 389 ----GVSASHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQ 444
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQAQQHIAI 253
Y+ +A + G ++ +TL V T+Q+S+ L A + +
Sbjct: 445 YKRSEDARMALEQMEGFELAGRTLRVNTVHEKGTIRYTQQDSLDEAGGGNLNAASRQALM 504
Query: 254 QKMALQTSGMNTLGGGM--SLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC-G 310
QK+A + T + ++ ++ + L + + + +++ ED++ EC
Sbjct: 505 QKLARTDQTVITPPPVVRPNIPQTMQSRSVLLKNMFNPENETERDWDKDLAEDVKYECED 564
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNA 365
KYG + + + + Q G++++++ A L+GR FGGN V+A
Sbjct: 565 KYGKVEFIKVEKDSQ--------GEIYVKFDSVESAKNAIQGLNGRWFGGNQVSA 611
>gi|389582230|dbj|GAB64785.1| RNA binding domain [Plasmodium cynomolgi strain B]
Length = 1046
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 152/353 (43%), Gaps = 70/353 (19%)
Query: 69 DAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG 128
D + I + +AFVE RT+++ SN M L+GI F G +R+ RP + P +L P
Sbjct: 688 DICLKACIRGDTHYAFVEFRTLQDTSNCMLLNGINFYGNNLRIGRPKTF-PAELTSLIPA 746
Query: 129 QPSPNLNLAAVGLASGAIGGA------EGPDRVFVGGLPYYFTETQ-------------- 168
P ++ + L+ G IG + +++ LP + Q
Sbjct: 747 PTIPTID--SYYLSQGIIGLQAFAVFFQNEEKMKNAYLPMSMIKLQKLCVSNISKNNERG 804
Query: 169 -IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 227
IKELLE+FG + F+ + D+ ++ + + ++ A A L
Sbjct: 805 KIKELLEAFGEIRNFECFEGDDSTDT----YIALVEYTTSENAIQAQKILNQN------- 853
Query: 228 RATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAI 287
+S + + E E + + +K +G+ L + + + L+
Sbjct: 854 ----TSYKIQFEYEILNDPLINRLIKRKYMSSENGI--------LSQQIPTRTVVLSRIA 901
Query: 288 TADALADDEEYEEILEDMREECGKYGTLVNVVIP-------------------RPDQN-- 326
T D L D EY +I+ED++ EC K+G++V VV+P + D+
Sbjct: 902 TFDELCDPSEYRDIVEDIKIECEKFGSVVEVVLPVFSRETFDFLLREAAKCAAKEDRTHP 961
Query: 327 GGETPGVGKVFLEYYDAVGCAT-AKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+ +G F+ Y++ + AT A+ LSGRKFG N + A YY E K+ K++
Sbjct: 962 NYDLTSIGCAFI-YFETIEAATKARKELSGRKFGANIIEANYYSEKKFLLKNF 1013
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 150/356 (42%), Gaps = 51/356 (14%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G N+ V + K +VE RTV+
Sbjct: 75 ARSVFVSQLAARLTARDLGYFFED---KLGENTVMDARIVTDRISRRSKGIGYVEFRTVD 131
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
A+ L G + G+ + V+ L A G NLNL S GGA
Sbjct: 132 LVDKALDLSGTVVMGLPIMVQLTEAERNRLHAGDG------NLNLPPG--VSAPHGGAM- 182
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
+++VG L + TE IK++ E FG L DL +D TG SKGY F Y+ +A
Sbjct: 183 --QLYVGSLHFNLTEADIKQVFEPFGELEFVDLHRDPTTGRSKGYAFVQYKRAEDARMAM 240
Query: 212 AALNGLKMGDKTLTVRRATASSGQSKTEQ-ESI-------LAQAQQHIAIQKMALQTSGM 263
+ G ++ + L V G + Q ES+ L A + +QK+A S
Sbjct: 241 EQMEGFELAGRQLKVNTVHDKGGVVRYAQTESLDDSGGGNLNAASRQALMQKLARTDSA- 299
Query: 264 NTLGGGMSLFGETLA----------KVLCLTEAITADALADDEEYEEILEDMREEC-GKY 312
L E +A + + L + + D+ +E+ +D++ EC KY
Sbjct: 300 -------PLLPEPVARPNIPQTMESRSVLLKNMFDPEEESGDDWDKELADDVKGECESKY 352
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCA-TAKNALSGRKFGGNTVNAFY 367
G + + + + Q G+++++ +DAV A A L+GR FGG V+A +
Sbjct: 353 GKVSAIKVEKETQ--------GEIYVK-FDAVDAARKAVQGLNGRWFGGKQVSAAF 399
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 120/278 (43%), Gaps = 47/278 (16%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 291 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 350
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 351 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 410
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSG------MNTLGGGMSLFGETLAKVLCL---- 283
+ ++A+ + +Q + ALQ SG + L +S E LA +
Sbjct: 411 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFSAVADLQTRLSQQSEVLAAAASVQPLA 470
Query: 284 TEAITADALADDEEYE------EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
T+ + + + E EI +D+ EEC K+G +V++ + D+N + G V+
Sbjct: 471 TQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVVHIYV---DKNSAQ----GNVY 523
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 524 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 561
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 116/267 (43%), Gaps = 46/267 (17%)
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
G+ GP R++VG L + TE ++ + E FG + G L+ D +TG SKGYGF + D
Sbjct: 224 GSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECA 283
Query: 208 DIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQE------------SILAQAQ 248
A LNG +K+G T +TASS E E ++A+
Sbjct: 284 KKALEQLNGFELAGRPMKVGHVTERSDSSTASSILDNDELERTGIDLGTTGRLQLMARLA 343
Query: 249 QHIAIQ-----KMALQTSG---MNTLGG-----------GMSLFGETLA-KVLCLTEAIT 288
+ ++ + ALQ +G T+ G ++L + LA L L+
Sbjct: 344 EGTGLKIPPAAQQALQMTGSMSFPTISGPPAVPTPSPSQALNLPAQPLATHCLQLSNLFN 403
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT 348
A D EI +D+ EEC K+G +V++ + D+N + G V+++
Sbjct: 404 PQAENDPSWAVEIQDDVIEECNKHGGVVHIYV---DKNSTQ----GNVYVKCPSIPAAMA 456
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKYFN 375
NAL GR F G + A Y P Y N
Sbjct: 457 TVNALHGRWFAGKMITAAYVPLPTYHN 483
>gi|340500276|gb|EGR27170.1| splicing factor u2af large subunit, putative [Ichthyophthirius
multifiliis]
Length = 201
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGG--NSAGPGDAVVNVYINHEKKFAFVEM 87
RHARR+Y+G +P N++ ++ + + + A GG +S + ++ I+ + KFAF+E+
Sbjct: 22 RHARRLYIGNIPDSINQEYLSEWLYRSLEAAGGLVDSLPNENPIIKCEIDSKGKFAFIEI 81
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL---AAVGLASG 144
RT+EE + + LDGII +R+RRPT+Y + P LNL +G+
Sbjct: 82 RTIEETTTLLQLDGIILWHRQLRIRRPTEYEK--FPQIYPNYNVKKLNLDLFKTIGIVII 139
Query: 145 AIGGAEGPDRVFVGGLPYYFTETQIKELL 173
+GP+++F+ LP TQ+ EL+
Sbjct: 140 PTVVDDGPNKIFLANLP-----TQMDELM 163
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 144/350 (41%), Gaps = 46/350 (13%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G + V + K +VE R+++
Sbjct: 252 ARSVFVSQLAARLTARDLGYFFED---KLGEGTVMDSRIVTDRLSRRSKGIGYVEFRSID 308
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA-AVGLASGAIGGAE 150
A++L G + G+ V V+ + L PG NLNL V GA+
Sbjct: 309 MVEKAISLSGTVVMGLPVMVQ----LTESERNKLHPG--DGNLNLPPGVSAPHGAM---- 358
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
+++VG L + TE+ IK++ E FG L DL +D TG SKGY F Y+ +A
Sbjct: 359 ---QLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMA 415
Query: 211 CAALNGLKMGDKTLTV----RRATASSGQSKTEQES---ILAQAQQHIAIQKMAL----- 258
+ G ++ +TL V + TA Q T E+ L A + +QK+A
Sbjct: 416 LEQMEGFELAGRTLRVNTVHEKGTARYAQQDTLDEAGGGNLNAASRQALMQKLARIEPIP 475
Query: 259 --QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC-GKYGTL 315
T+ T+ M L + E D D + ED++ EC KYG +
Sbjct: 476 KPPTNNKPTIPQAMQSRSVLLKNMFDPEEETERDWDKD------LAEDVKGECEDKYGQV 529
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNA 365
+ + E GK+++++ A L+GR FGG V+A
Sbjct: 530 DAIKV--------EQETQGKIYVKFNSIDSAKNAIQGLNGRWFGGRQVSA 571
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 155/398 (38%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 174 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 226
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 227 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 269
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 270 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 329
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 330 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 389
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGE--TLAKVLCLTEAITADALA 293
++A+ + +Q + ALQ SG G L ++V L A + LA
Sbjct: 390 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQSEVTALAAAASVQPLA 449
Query: 294 ---------------DDEEYE-EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
D+ ++ EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 450 TQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 502
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 503 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 540
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 155/398 (38%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGE--TLAKVLCLTEAITADALA 293
++A+ + +Q + ALQ SG G L ++V L A + LA
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQSEVTALAAAASVQPLA 416
Query: 294 ---------------DDEEYE-EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
D+ ++ EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 417 TQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 469
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 470 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 507
>gi|414591751|tpg|DAA42322.1| TPA: hypothetical protein ZEAMMB73_939656 [Zea mays]
Length = 704
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 4 NMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
N+ A Q + P Q MTQQATRHAR VYVGGLPP ANEQ +A FF+ VM AIGGN
Sbjct: 222 NLYNLAAGQFNPHVIQP-QAMTQQATRHARPVYVGGLPPTANEQTVAIFFNGVMAAIGGN 280
Query: 64 SAGPGDAV 71
+AGPGDAV
Sbjct: 281 TAGPGDAV 288
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 34/303 (11%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE T E A+++ G+ +G +RV + AA A
Sbjct: 360 KGIAYVEFYTQESVIKALSMTGMSMKGQGIRVH-SSQAEKNRAAK------------AQK 406
Query: 140 GLASGAIGGAEGPDRVFVG---GLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
L A+ ++ P + V G+ Y E ++ +L FG + L + D GNSKGY
Sbjct: 407 QLQDNALKESDNPTTIVVSNLLGVLSYLNEIELNQLFSPFGNIIDVALAR-TDDGNSKGY 465
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKM 256
+ ++ A +NG + + + V A SK+ S+ + +
Sbjct: 466 AYIRFKRWNEAKEALNVMNGFDINGQQIKVAYANTRKD-SKSRLHSLGDVDMERLDDDDA 524
Query: 257 ALQTSGMNTLGGGMSLFGETL---AKVLCLTEAITADALADDEEY-EEILEDMREECGKY 312
L SG N M + + L L+ T+ D+ E+ +EI ED++EECGKY
Sbjct: 525 GL-ISGSNIKIALMKKLQQRQPLNSSNLVLSNMYTSADYEDNREFFDEIEEDVKEECGKY 583
Query: 313 GTLVNVVIPR--PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
GT++ V + + PD GKV++++ + A +L GR F GNT+ Y +
Sbjct: 584 GTVIQVFVNKRNPD---------GKVYVKFKNNDDAQAANKSLQGRYFAGNTIQVSYISD 634
Query: 371 DKY 373
D+Y
Sbjct: 635 DQY 637
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 151/350 (43%), Gaps = 37/350 (10%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEE 92
R V+V L + + FF + +G S V + K A+VE+ +++
Sbjct: 303 RSVFVSQLAARLTARDLGYFFEE---KLGEGSVRDVRIVTDRVSRRSKGIAYVELSSIDM 359
Query: 93 ASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGP 152
S A+AL G I G+ + V+ T+ AA G +++ L G G
Sbjct: 360 VSRAIALTGTIVMGLPIMVQL-TESERNKVAASG----------SSMHLPPGVTAPPPGS 408
Query: 153 DRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACA 212
+++VG L + TE+ +K++ E FG L DL +D TG SKG+ F Y+ +A
Sbjct: 409 MQLYVGSLHFNLTESDVKQVFEPFGELEFVDLHRDPLTGRSKGFAFVQYKRSEDARMALQ 468
Query: 213 ALNGLKMGDKTLTVRRATASSG------QSKTEQES---ILAQAQQHIAIQKMALQTSGM 263
+++G + + L V G QS + ES L A + +QK+A
Sbjct: 469 SMDGFDLAGRQLKVNTVHEKGGAIRYQSQSDSLDESGGGNLNAASRQALMQKLARIEPPK 528
Query: 264 NTLGGGMSLFGETLAKVLCLTEAITADALADDEEY-----EEILEDMREEC-GKYGTLVN 317
+ SL + L + + +++E +E+ +D+++EC KYG LV+
Sbjct: 529 PAISPMASLPKAAMQSRSVLLRNMFKEPELEEKENGPNWAKELTDDVKQECEDKYG-LVD 587
Query: 318 VVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ PD G+++L++ + A L+GR FGG + A +
Sbjct: 588 FIKLEPDSQ-------GEMYLKFKSIEAASKAIEGLNGRYFGGQPIQATF 630
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 143/377 (37%), Gaps = 59/377 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R R V+ L + + FFS V +++ K A+VE
Sbjct: 194 RDMRTVFCMQLSQRIRARDLEEFFSAV------GKVRDVRLIMDNKTRRSKGIAYVEFLD 247
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
VE AM L+G G+ + V+ PT AAA S L VG
Sbjct: 248 VESVPLAMGLNGQKLFGIPIVVQ-PTQAERNRAAAQNASTSSSTLQRGNVG--------- 297
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
P R++VG L + TE +K + E FG + +L+KD +T SKGYGF + D
Sbjct: 298 --PMRLYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKK 355
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSK-------------------TEQESILAQAQQH 250
A LNG ++ + + V T + S+ T + ++A+ +
Sbjct: 356 ALEQLNGFELAGRPMKVGHVTERTDVSQAPSFLDSEELDRSGIDLGATGRLQLMAKLAEG 415
Query: 251 IAIQ--KMALQTSGMNTLG----------GGMSLFGETLAKVLCLTEAITADALADDEEY 298
Q + A+ MNT G + T+A C + D L +
Sbjct: 416 TGFQIPQAAVNALQMNTTGLPGQPQAAAVAAAAAAAPTIA-TQCFLLSNMFDPLTETNPS 474
Query: 299 --EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGR 356
EEI D+ EEC K+G ++V + R G V+++ + NAL GR
Sbjct: 475 WDEEIRRDVIEECRKHGGALHVYVDRASPE-------GHVYVKCPTIASAVASVNALHGR 527
Query: 357 KFGGNTVNAFYYPEDKY 373
F G + A Y P Y
Sbjct: 528 WFAGRIITAAYVPVMSY 544
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 152/396 (38%), Gaps = 71/396 (17%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 42 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 94
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 95 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 137
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 138 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 197
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 198 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 257
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALA-- 293
++A+ + +Q + ALQ SG G L + L A + LA
Sbjct: 258 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQ 317
Query: 294 -----------DDEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
+EE EI +D+ EEC K+G ++++ + D+N + G V+++
Sbjct: 318 CFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVYVK 370
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
A NAL GR F G + A Y P Y +
Sbjct: 371 CPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHS 406
>gi|145502691|ref|XP_001437323.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404473|emb|CAK69926.1| unnamed protein product [Paramecium tetraurelia]
Length = 438
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 270 MSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
M+ + + +L + +T + + DEE+ +I+ED+REEC K+GT+ NV+IPRP+ G
Sbjct: 294 MARYVQIPTNILVIKNVLTLEDVTIDEEFNDIMEDIREECSKFGTVKNVIIPRPE-FGKI 352
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
GVGK+F+EY TA+ L+GR +G TV Y +K+ + ++
Sbjct: 353 IVGVGKIFVEYEKTQEARTARRYLAGRMYGDKTVECEYLSREKWAKRQFT 402
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 24/131 (18%)
Query: 17 PLMPVQVMTQ---QATRHA-RRVYVGGLPPLANEQAIAT----------FFSQVMTAIGG 62
PL+ +Q + Q QA A R++YVG LPP + + + F +Q + +G
Sbjct: 130 PLIQMQRLQQLRAQADVKADRKLYVGNLPPNSQPKEVEMVMDILNQLQDFLNQTLLKMGV 189
Query: 63 NSAGPGDAVVNVYINHEKK---------FAFVEMRTVEEASNAMALDGIIFEGVAVRVRR 113
+S G ++ N +I+ + F F+E R+ EEA+ L +IF+G +++ R
Sbjct: 190 SSEHAG-SICNCWIDSNGQILRLIYLGHFGFIEFRSPEEATQGFILKDVIFKGHQLKIGR 248
Query: 114 PTDYNPTLAAA 124
P + +LAA
Sbjct: 249 PKSFLTSLAAV 259
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 151/346 (43%), Gaps = 36/346 (10%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G + V + K +VE R+++
Sbjct: 251 ARSVFVSQLAARLTARDLGYFFED---KLGEGTVMDARIVTDRLSRRSKGIGYVEFRSID 307
Query: 92 EASNAMALDGIIFEGVAVRVR-RPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAE 150
A+AL G I G+ + V+ ++ N + A G G +L+L ASGAI
Sbjct: 308 LVEKAIALSGTIVMGLPINVQLTESERNKSHA---GDG----SLHLPPGVTASGAI---- 356
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
++VG L + TE+ IK++ E FG L DL KD TG SKGY F Y+ +A
Sbjct: 357 ----LYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDARMA 412
Query: 211 CAALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQAQQHIAIQKMALQTSGM 263
+ G ++ +TL V T+ +S+ L A + +QK+A +
Sbjct: 413 LEQMEGFELAGRTLRVNTVHEKGSVRYTQTDSLDDSGGANLNAASRQALMQKLARTEQPV 472
Query: 264 NTLGGGMSLFGETL-AKVLCLTEAITADALADDEEYEEILEDMREEC-GKYGTLVNVVIP 321
+ + + ++ + L + + +++ +D++ EC KYG ++ + +
Sbjct: 473 VPAEPVKPIIPQAMQSRSVLLKNMFNPEEETEQNWDKDLADDVKGECENKYGKVLAIKVE 532
Query: 322 RPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ Q G++++++ +A L+GR FGG ++A +
Sbjct: 533 KDSQ--------GEIYVKFDTVDTAKSAVQGLNGRWFGGRQISANF 570
>gi|124511860|ref|XP_001349063.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23498831|emb|CAD50908.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 1125
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 144/340 (42%), Gaps = 51/340 (15%)
Query: 1 MAQNMLPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAI 60
+ +N+L L P + V + + AR +YVG +P + Q I + + + +
Sbjct: 627 LYKNVLNINDLNL---PTIDVNI-----EKTARELYVGNIPQHIDIQEIVKYLNSCLLIL 678
Query: 61 GGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPT----D 116
+ + I + +AFVE R +++ SN M L+GI F G +R+ RP +
Sbjct: 679 YNKENENENICLKACIRGDTHYAFVEFRNIQDTSNCMLLNGINFYGNNLRIGRPKTFPIE 738
Query: 117 YNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQ-------- 168
Y+ + A P + L+ +GL S I + +++ GLP + Q
Sbjct: 739 YHSLIPQATIPAIDNYYLSQGLIGLRSFII-FCKNEEKMKNDGLPVNMIKLQKLCVSNIS 797
Query: 169 -------IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGD 221
IKELLE+FG + F+ G+ + + T+ A A L
Sbjct: 798 KNNDTSKIKELLEAFGEIKNFEFF----YGDETSDTYISLVEYVNTENAIQAHKILNQN- 852
Query: 222 KTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVL 281
+S + + E E I HI ++ M T +SL + KV+
Sbjct: 853 ----------TSYKIQFEHEII---NDPHIN---NIIKNKYMKTENSILSL--QVPTKVI 894
Query: 282 CLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIP 321
L + T + L+D EY++I+ED++ EC KYG + VV+P
Sbjct: 895 VLNKIATFEELSDSSEYKDIVEDIKIECDKYGKTLEVVLP 934
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+G F+ + + A+ LSGRKFG N + A Y+ E K+ K++
Sbjct: 1046 SIGCAFIHFENIESATKARKELSGRKFGANIIEANYFSEKKFLMKNF 1092
>gi|66358384|ref|XP_626370.1| splicing factor U2AF U2 SnRNP auxiliary factor large subunit, RRM
domain [Cryptosporidium parvum Iowa II]
gi|46227901|gb|EAK88821.1| splicing factor U2AF U2 SnRNP auxiliary factor large subunit, RRM
domain [Cryptosporidium parvum Iowa II]
Length = 438
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 46/316 (14%)
Query: 96 AMALDGIIFEGVAVRV--RRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPD 153
+ LDG+I + +++ RRP Y+ NLN V L + I D
Sbjct: 127 CLKLDGLIIDSQNIKLFCRRPNKYS--------------NLNNEKV-LDTFIIPRISQHD 171
Query: 154 ------RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
+ + LP E +I++ LES G L ++ D TG KG G +++ ++
Sbjct: 172 NFKENEKCILKNLPTDINEEKIRQHLESIGKLKSLTIIYDPITGIPKGVGSFEFEESSLC 231
Query: 208 DIACAALNG------------LKMGDKTLTVRRATASS-GQSKTEQESILAQAQQHIAIQ 254
A A L+G + +G T+T ++ QS S + Q +++ I
Sbjct: 232 KKAIAILHGKPIESTKNGIWNIYLGSGTITNYKSNKGQFNQSNFSVNSNIIQNSEYLHIT 291
Query: 255 K----MALQTSGMNTLGGGMSL---FGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
+ M LG M GET ++++ L + L D+E Y L+ +R
Sbjct: 292 EIPTSMTYNIFSNPVLGLMMKYSKQVGETPSQIIQLLNIFLPEELVDNEIYNSTLDSVRS 351
Query: 308 ECGKYGTLVNVVIPRPD--QNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG-NTVN 364
E YGT++ + PRP + G GKVF+ + D A+ +GR F TV+
Sbjct: 352 EAEVYGTILEIFCPRPKVIEEFHSCSGAGKVFIYFSDITAARRAQYQFNGRVFDNIKTVS 411
Query: 365 AFYYPEDKYFNKDYSA 380
A ++P +KY +YS
Sbjct: 412 ATFFPLEKYLKHEYSV 427
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 144/350 (41%), Gaps = 46/350 (13%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G + V + K +VE R+++
Sbjct: 252 ARSVFVSQLAARLTARDLGYFFED---KLGEGTVMDSRIVTDRLSRRSKGIGYVEFRSID 308
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA-AVGLASGAIGGAE 150
A++L G + G+ V V+ + L PG NLNL V GA+
Sbjct: 309 MVEKAISLSGTVVMGLPVMVQ----LTESERNKLHPG--DGNLNLPPGVSAPHGAM---- 358
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
+++VG L + TE+ IK++ E FG L DL +D TG SKGY F Y+ +A
Sbjct: 359 ---QLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMA 415
Query: 211 CAALNGLKMGDKTLTV----RRATASSGQSKTEQES---ILAQAQQHIAIQKMAL----- 258
+ G ++ +TL V + TA Q T E+ L A + +QK+A
Sbjct: 416 LEQMEGFELAGRTLRVNTVHEKGTARYAQQDTLDEAGGGNLNAASRQALMQKLARIEPIP 475
Query: 259 --QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC-GKYGTL 315
T+ T+ M L + E D D + ED++ EC KYG +
Sbjct: 476 KPPTNNKPTIPQAMQSRSVLLKNMFDPEEETERDWDKD------LAEDVKGECEDKYGQV 529
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNA 365
+ + E G++++++ A L+GR FGG V+A
Sbjct: 530 DAIKV--------EQETQGEIYVKFNSIDSAKNAIQGLNGRWFGGRQVSA 571
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 166/403 (41%), Gaps = 65/403 (16%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
+ +Q T+ AR +YVG L +E + F T + + G N K F
Sbjct: 147 IAPRQVTQGAR-IYVGSLDYSLSEADLRQVFGSFGTIVNIDMPREG--------NRSKGF 197
Query: 83 AFVEMRTVEEASNAMA-LDGIIFEGVAVRVRRPTD----YNPTLAAALG--------PGQ 129
F+E T E A A+A ++ + +G ++V RPT+ N ++G P
Sbjct: 198 CFIEYTTQESAEMALATMNRFVLKGRPIKVGRPTNAIVSNNQNNNNSMGNHTGMVGMPVL 257
Query: 130 PSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKD-R 188
P N N + I +R+++G +PY FT ++ + ++FG + L+
Sbjct: 258 PPENTN---ANIPPHQIPQNPPQNRIYIGSVPYSFTPDDLRHIFKAFGVILSCQLIPSVE 314
Query: 189 DTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA--SSGQSKTEQESILAQ 246
G +GYGF + P +A +NG ++G K L V ATA S + Q I++
Sbjct: 315 KPGTHRGYGFIEFGTPDQAKLAIETMNGFEVGGKQLKVNVATALKPSNSISSNQIPIVSP 374
Query: 247 AQQHIAIQK----------MALQT--SGMNTLGGGMSLF-------------------GE 275
Q++ Q+ MA+ S N +L+
Sbjct: 375 TLQNVMSQQIPPTLAIPPTMAIPPVLSMPNVTPLPPNLYQPPNIPVPYPANSYPIIPNST 434
Query: 276 TLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGK 335
+ + V+ LT I + + D E+ E+++ EC KYG + +V I D + V +
Sbjct: 435 SNSNVILLTNMIGPEEVDD-----ELKEEVKIECSKYGKVYDVRIHISDHVSKPSDRV-R 488
Query: 336 VFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+F+ + A AL+ R FGGN V Y +++++ Y
Sbjct: 489 IFVVFETNTMAQIAVPALNNRWFGGNQVYCRLYNTERFYSSFY 531
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 152/396 (38%), Gaps = 71/396 (17%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALA-- 293
++A+ + +Q + ALQ SG G L + L A + LA
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQ 416
Query: 294 -----------DDEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
+EE EI +D+ EEC K+G ++++ + D+N + G V+++
Sbjct: 417 CFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVYVK 469
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
A NAL GR F G + A Y P Y +
Sbjct: 470 CPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHS 505
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 148/348 (42%), Gaps = 38/348 (10%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G + V + K +VE RT+E
Sbjct: 232 ARSVFVSQLAARLTARDLGYFFED---KLGEGTVMDARIVTDRLSRRSKGIGYVEFRTIE 288
Query: 92 EASNAMALDGIIFEGVAVRVR-RPTDYNPTLAAALGPGQPSPNLNLA-AVGLASGAIGGA 149
A+ L G + G+ + V+ + N T A G G ++NL V GAI
Sbjct: 289 LVEKAIGLSGTVVMGLPIMVQLTEAERNKTHA---GDG----SINLPPGVSAPHGAI--- 338
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
++VG L + TE+ IK++ E FG L DL +D TG SKGY F Y+ +
Sbjct: 339 -----LYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARM 393
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQAQQHIAIQKMAL--QT 260
A + G ++ +TL V T+Q+S+ L A + +QK+A Q
Sbjct: 394 ALQQMEGFELAGRTLRVNTVHEKGTTKYTQQDSLDESGGGNLNAASRQALMQKLARTDQP 453
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC-GKYGTLVNVV 319
+ ++ ++ + L D + + E+ +D++ EC KYG ++ +
Sbjct: 454 APRPEPVQRPNIPQAMQSRSVLLKNMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIK 513
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ + Q G++++++ A L+GR FGG V+A +
Sbjct: 514 VEKDSQ--------GEIYVKFDSIDYAQKAIQGLNGRWFGGRQVSAVF 553
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 148/348 (42%), Gaps = 38/348 (10%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G + V + K +VE RT+E
Sbjct: 232 ARSVFVSQLAARLTARDLGYFFED---KLGEGTVMDARIVTDRLSRRSKGIGYVEFRTIE 288
Query: 92 EASNAMALDGIIFEGVAVRVR-RPTDYNPTLAAALGPGQPSPNLNLA-AVGLASGAIGGA 149
A+ L G + G+ + V+ + N T A G G ++NL V GAI
Sbjct: 289 LVEKAIGLSGTVVMGLPIMVQLTEAERNKTHA---GDG----SINLPPGVSAPHGAI--- 338
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
++VG L + TE+ IK++ E FG L DL +D TG SKGY F Y+ +
Sbjct: 339 -----LYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARM 393
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQAQQHIAIQKMAL--QT 260
A + G ++ +TL V T+Q+S+ L A + +QK+A Q
Sbjct: 394 ALQQMEGFELAGRTLRVNTVHEKGTTKYTQQDSLDESGGGNLNAASRQALMQKLARTDQP 453
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC-GKYGTLVNVV 319
+ ++ ++ + L D + + E+ +D++ EC KYG ++ +
Sbjct: 454 APRPEPVQRPNIPQAMQSRSVLLKNMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIK 513
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ + Q G++++++ A L+GR FGG V+A +
Sbjct: 514 VEKDSQ--------GEIYVKFDSIDYAQKAIQGLNGRWFGGRQVSAVF 553
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 47/278 (16%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 284 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 343
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 344 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 403
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALA 293
+ ++A+ + +Q + ALQ SG G L + L A + LA
Sbjct: 404 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLA 463
Query: 294 -------------DDEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
+EE EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 464 TQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 516
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y +
Sbjct: 517 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHS 554
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 152/396 (38%), Gaps = 71/396 (17%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALA-- 293
++A+ + +Q + ALQ SG G L + L A + LA
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQ 416
Query: 294 -----------DDEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
+EE EI +D+ EEC K+G ++++ + D+N + G V+++
Sbjct: 417 CFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVYVK 469
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
A NAL GR F G + A Y P Y +
Sbjct: 470 CPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHS 505
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 143/374 (38%), Gaps = 59/374 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N ++F +VE
Sbjct: 6 RDARTVFCMQLSQRIRARDLEEFFSAV---------GKVRDVRLITCNKTRRFKGLCYVE 56
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
E A+AL G GV + V+ LA + P S N
Sbjct: 57 FAEPESVPLAIALTGQRLCGVPIVVQPTQAEKNRLAGSNMPAMSSFN------------- 103
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF +++
Sbjct: 104 KGPNGPMRLYVGSLHFNITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAED 163
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQES-----------------ILAQAQQ 249
A LNG ++ + + + T + T +S ++A+ Q
Sbjct: 164 AKKAMEQLNGFELAGRPMKINHVTEHFTGNHTYLDSDEMDRAGIDLGATGRLQLMAKLAQ 223
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETL----------AKVLCLTEAITADALADDEEYE 299
++ A S +N + + L + L+ + + ++
Sbjct: 224 GTGLEIPAAAQSALNLQASIQAAQQQALPVASVAPPIATQCFMLSNMFDSSSETHPLWHQ 283
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
EI +D+ +EC K+G ++++ + + G V+++ A NAL GR F
Sbjct: 284 EICDDVMDECNKHGGVLHIYVDKASPQGN-------VYVKCPSVTVAVNAVNALHGRWFA 336
Query: 360 GNTVNAFYYPEDKY 373
G + A Y P Y
Sbjct: 337 GRIITAAYVPLINY 350
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 152/387 (39%), Gaps = 62/387 (16%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 119 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 171
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 214
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 215 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 274
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 275 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 334
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAKVLCL-TEAITADALAD 294
++A+ + +Q + ALQ SG G + A V L T+ + +
Sbjct: 335 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAASALAAAASVQPLATQCFQLSNMFN 394
Query: 295 DEEYE------EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT 348
+ E EI +D+ EEC K+G ++++ + D+N + G V+++
Sbjct: 395 PQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVYVKCPSIAAAIA 447
Query: 349 AKNALSGRKFGGNTVNAFYYPEDKYFN 375
A NAL GR F G + A Y P Y N
Sbjct: 448 AVNALHGRWFAGKMITAAYVPLPTYHN 474
>gi|70954273|ref|XP_746191.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526725|emb|CAH88205.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 686
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 47/315 (14%)
Query: 28 ATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEM 87
A + AR +YVG +P + Q I F + + + + I + ++AFVE
Sbjct: 249 AEKTARELYVGNIPQNIDIQEIVKFLNTCLLILYNKENENESICLKACIRGDTRYAFVEF 308
Query: 88 RTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIG 147
R++++ SN M L+GI F +R+ RP + + P P + L+ G IG
Sbjct: 309 RSLQDTSNCMLLNGIYFYSNNLRIGRPKTFPAEYTKLIPPATIPP---IDTYYLSQGLIG 365
Query: 148 GA------EGPDRVFVGGLPYYFTETQ---------------IKELLESFGTLHGFDLVK 186
+ D LP + Q IKELLE+FG + F+ +
Sbjct: 366 IKAFVIFHQNRDETKNEYLPVDMIKLQKLCVSNISKNNETNKIKELLEAFGEIQSFEFFE 425
Query: 187 DRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
+ NS Y C+ + V + A+ K+ ++ + R + I+
Sbjct: 426 GEE--NSDTY-ICLVEYNNVEN----AIQAHKILNQNTSYRIQF---------EYEIVND 469
Query: 247 AQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMR 306
+ ++K +QT L + KV+ L++ T D L++ E+Y+EI ED++
Sbjct: 470 PTINQLVKKKYMQTK-------NAILSQQIPTKVVVLSKIATFDELSNPEDYKEISEDIK 522
Query: 307 EECGKYGTLVNVVIP 321
EC KYG ++ VV+P
Sbjct: 523 IECEKYGPVLEVVLP 537
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
+G F+ + G + LSGRKFG N + A YY E K+ K++
Sbjct: 607 SIGCAFIYFETIEGATKTRKELSGRKFGANIIEANYYSEKKFLMKNF 653
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 50/281 (17%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +AS G GP R++VG L + TE ++ + E FG + G L+ D +TG SKGYG
Sbjct: 249 AAAMASMLQRGGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYG 308
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R+ ASS S T
Sbjct: 309 FISFADAECAKKALEQLNGFELAGRPMKVGHVTERSDASSASSFLDNDELERTGIDLGTT 368
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGG------------------GMSLFGE 275
+ ++A+ + +Q K ALQ SG + G M+L +
Sbjct: 369 GRLQLMARLAEGTGLQIPAAAKQALQMSGSVSFGNMPNASATPPLIPNPGMNQAMNLPTQ 428
Query: 276 TLAKVLCLTEAITADALADDEEYE-EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
LA + + ++ ++ EI +D+ EEC K+G ++++ + D+N + G
Sbjct: 429 PLATHCLQLSNMFNPQMENEPGWDIEIRDDVIEECRKHGGVIHIYV---DKNSAQ----G 481
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
V+++ ++L GR F G + A Y P Y N
Sbjct: 482 NVYVKCPTIPVAMAVVSSLHGRWFAGKMITAAYVPLPTYHN 522
>gi|224003373|ref|XP_002291358.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973134|gb|EED91465.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 99
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFL 338
+V+ L +T L DD EY EILED R+EC +GTL N++IPR NG PG K+FL
Sbjct: 4 RVVELKHMLTQQDLEDDNEYNEILEDTRDECSSFGTLKNIIIPR---NG---PGATKIFL 57
Query: 339 EYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
EY A A L+GR F G V A + E K+ N+DYS
Sbjct: 58 EYMTNEDAAKAIAGLAGRTFDGRQVTAVCFDEIKFANEDYS 98
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 148/381 (38%), Gaps = 73/381 (19%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK---FAFVE 86
R AR V+V L ++ + FF+ S G V + N K+ A+VE
Sbjct: 101 RDARTVFVWQLSARIRQRDLEDFFT---------SVGKIRDVRLIMDNKTKRSKGIAYVE 151
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
R VE A A+ L G GV +++++ ++A P P P+
Sbjct: 152 FREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSAT--PSLPRPSQQ----------- 198
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
+GP ++++G L Y TE +K + E FG + L+KD T S+GYGF Y +
Sbjct: 199 --NKGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDD 256
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
A LNG ++ + + V T ++E + A + L T+G L
Sbjct: 257 AKKALDQLNGFELAGRPMKVNHVT-----ERSEYACLSALDNDEADRSGVDLGTTGRLAL 311
Query: 267 ------GGGMSLFGETLAKV------------------------LCLTEAITAD----AL 292
G G+ + LA++ +C + ++ +
Sbjct: 312 MAKLAEGTGLEIPKAALAQLHIGQNNPILGSAGSVSSSSAIAPPVCTQCFMLSNMFDPHV 371
Query: 293 ADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNA 352
A +EEI +D+ EEC K G +++ + R T G V+++ N
Sbjct: 372 ATHSVFEEIRDDVIEECTKAGGCLHIFVDR-------TSAQGNVYVKCPSIAVATQCVNM 424
Query: 353 LSGRKFGGNTVNAFYYPEDKY 373
L GR F G + A Y P Y
Sbjct: 425 LHGRYFSGRLITAAYVPLINY 445
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 147/381 (38%), Gaps = 73/381 (19%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK---FAFVE 86
R AR V+V L ++ + FF+ S G V + N K+ A+VE
Sbjct: 101 RDARTVFVWQLSARIRQRDLEDFFT---------SVGKIRDVRLIMDNKTKRSKGIAYVE 151
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
R VE A A+ L G GV +++++ ++A P P P+
Sbjct: 152 FREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSAT--PSLPRPSQQ----------- 198
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP ++++G L Y TE +K + E FG + L+KD T S+GYGF Y +
Sbjct: 199 --NRGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDD 256
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
A LNG ++ + + V T ++E + A + L T+G L
Sbjct: 257 AKKALDQLNGFELAGRPMKVNHVT-----ERSEYACLSALDNDEADRSGVDLGTTGRLAL 311
Query: 267 ------GGGMSLFGETLAKV------------------------LCLTEAITADA----L 292
G G+ + LA++ +C + ++ +
Sbjct: 312 MAKLAEGTGLEIPKAALAQLHIGQNNPILGSAGSVSSSSAIAPPVCTQCFMLSNMFDPHV 371
Query: 293 ADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNA 352
A +EEI +D+ EEC K G +++ + R T G V+++ N
Sbjct: 372 ATHSVFEEIRDDVIEECTKAGGCLHIFVDR-------TSAQGNVYVKCPSIAVATQCVNM 424
Query: 353 LSGRKFGGNTVNAFYYPEDKY 373
L GR F G + A Y P Y
Sbjct: 425 LHGRYFSGRLITAAYVPLINY 445
>gi|325191168|emb|CCA25956.1| Poly(U)bindingsplicing factor PUF60 putative [Albugo laibachii
Nc14]
Length = 454
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 146/359 (40%), Gaps = 55/359 (15%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE------KKFAFV 85
A+R+YVG L E I F+ P A+ ++ ++ E K F F+
Sbjct: 135 AKRLYVGNLYYELKEDDIRNVFA------------PFGAIHSIDLSMEPGTGRSKGFCFL 182
Query: 86 EMRTVEEASNAM-ALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASG 144
E V A +A+ L+G A++V RP G +P + AAV +
Sbjct: 183 EFNDVLAAESAVQVLNGSTMANRAIKVGRPHR-----------GNQNPKDSEAAVNIGKE 231
Query: 145 AIGGAEGPDR-VFVGGLPYYFTETQIKELLESFGTLHGFDL--VKDRDTGNSKGYGFCVY 201
AI P + V++GG+ I+ + FG + + V ++G +GYGF +
Sbjct: 232 AIRNV--PTKCVYIGGVRTELNSRHIESIFAPFGEIKHCVMTAVSSSESGVHRGYGFIEF 289
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASS--GQSKTEQESILAQAQQHIAIQKMALQ 259
D A +NG ++ +TL V +A+A + K + ++ I ++
Sbjct: 290 GDEICAMNAIQHMNGFELAGQTLKVGKASAVALLVNLKISNDKVVD------GIHSLSDA 343
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVV 319
+ + L + LCL I + E + ++ EC KYG + VV
Sbjct: 344 KQRRKIIEPILELEEKEEQICLCLLNLIKPGDVD-----ENLRGEVASECSKYGDIAQVV 398
Query: 320 IPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
I E ++F++Y D G AK AL GR FGGN V A +YP + K Y
Sbjct: 399 I-------HELSSHVRIFVQYEDEAGALRAKGALHGRYFGGNAVKAHFYPIQMFLEKKY 450
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 115 TDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLE 174
T +P +A A Q NL + L S E R++VG L Y E I+ +
Sbjct: 102 TALDPEIAKARALAQA----NLLSQSLPSTLFNPIEFAKRLYVGNLYYELKEDDIRNVFA 157
Query: 175 SFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
FG +H DL + TG SKG+ F + D + A LNG M ++ + V R
Sbjct: 158 PFGAIHSIDLSMEPGTGRSKGFCFLEFNDVLAAESAVQVLNGSTMANRAIKVGR 211
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 150/392 (38%), Gaps = 68/392 (17%)
Query: 14 GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN 73
GA PL R AR ++ L + + FFS S G V
Sbjct: 138 GASPLTNRSDELTPEERDARTIFCMQLSQRIRARDLEEFFS---------SVGKVQDVRL 188
Query: 74 VYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP 130
+ N ++F A+VE + E + A+ L G GV + V+ T A G
Sbjct: 189 ITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQH------TQAEKNRMGNS 242
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
PNL G GP R++VG L + TE +K + E FG + L+ D +T
Sbjct: 243 MPNL----------MPKGQTGPMRLYVGSLLFNITEEMLKGIFEPFGKIENIQLIMDPET 292
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQSKTEQESILAQ 246
G SKGYGF +++ A LNG ++ + + V R G S + + +
Sbjct: 293 GRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTDELDRS 352
Query: 247 AQQHIAIQKMALQTSGMNTLGGGMSL-FGETLAKVLCLTEAITADALAD----------- 294
A ++ L M L G L A L +T +TA +
Sbjct: 353 GIDLGATGRLQL----MFKLAEGTGLEIPPAAANALNMTPVVTAPQINQQTAPPIATQCF 408
Query: 295 ------DEEYE-------EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYY 341
D + E EI +D+ EEC K+G +++V + DQ + G V+++
Sbjct: 409 MLSNMFDPQNENNSLWVKEIRDDVIEECNKHGGVLHVYV---DQASPQ----GNVYVKCP 461
Query: 342 DAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
A N+L GR F G + A Y P Y
Sbjct: 462 SIATAVAAVNSLHGRWFAGRVITAAYVPVVNY 493
>gi|224110606|ref|XP_002315575.1| predicted protein [Populus trichocarpa]
gi|222864615|gb|EEF01746.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 30/244 (12%)
Query: 142 ASGAIGG--AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
A AIG + P ++F+GG+ + + E+ +FG L + +D + + F
Sbjct: 27 AIDAIGDIVKDSPHKIFIGGISKVLSSKMLMEIASAFGPLKAYQFENSKDP--DEPFAFL 84
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y D +VT ACA LNG+K+G + +T +A ++ S ++ S Q QH K L
Sbjct: 85 EYADESVTFKACAGLNGMKLGGQVITAIQAVPNASSSGSDGNSQFGQISQH---AKALL- 140
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALA--DDEEYEEILEDMREECGKYGTLVN 317
E +VL L +++L+ + E EE+LED+R EC +Y +
Sbjct: 141 ---------------EKPTEVLKLKNVFDSESLSSLSNTEVEEVLEDVRLECARYYNVDK 185
Query: 318 V-----VIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
V + D N G G VF+E+ A + L GR F V Y+P D
Sbjct: 186 VTDDIEIEEVDDCNLGLIFERGCVFVEFRRTEAACMAAHCLHGRLFDDRAVVVEYFPLDI 245
Query: 373 YFNK 376
Y +
Sbjct: 246 YLAR 249
>gi|384252245|gb|EIE25721.1| hypothetical protein COCSUDRAFT_64802 [Coccomyxa subellipsoidea
C-169]
Length = 581
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 281 LCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGE-----TPGVGK 335
L +T +T D L DDEEY E+++D++EEC KYG ++ V++PRP + GK
Sbjct: 480 LQVTGMVTPDVLVDDEEYSEVIQDLQEECSKYGQVLRVLVPRPPNPAASNELFGSNNYGK 539
Query: 336 VFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
F E+ D GC+ AK A+ GR F G TV A Y
Sbjct: 540 AFAEFADVSGCSAAKAAIHGRLFAGETVQATY 571
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 33 RRVYVGGLPP-LANEQAIATFFSQVMTAIGGNSAGPG-DAVVNVYINHEKKFAFVEMRTV 90
R VYVG L L E A+ F+ M A N G +AVV+V ++ E ++AFVE+RT
Sbjct: 294 REVYVGNLVAGLVTEDALRQLFNSTMAAAFPNLLAQGLEAVVSVSMHSEGRYAFVELRTP 353
Query: 91 EEASNAMAL-DGIIFEGVAVRVRRPTDY 117
E AS A+ L + + G ++ V RP+ Y
Sbjct: 354 EMASAALQLSNQVQLLGQSISVGRPSGY 381
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 113/266 (42%), Gaps = 45/266 (16%)
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
G+ GP R++VG L + TE ++ + E FG + G L+ D +TG SKGYGF + D
Sbjct: 241 GSAGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECA 300
Query: 208 DIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQE------------SILAQAQ 248
A LNG +K+G T +TASS E E ++A+
Sbjct: 301 KKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLA 360
Query: 249 QHIAIQ-----KMALQTSGMNTLGG-------------GMSLFGETLA-KVLCLTEAITA 289
+ ++ + ALQ +G G ++L + LA L L+
Sbjct: 361 EGTGLKIPPAAQQALQMTGSIPFGNMAAPAIPTPAPSQALNLPSQPLATHCLQLSNLFDP 420
Query: 290 DALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATA 349
A D EI +D+ EEC K+G +V++ + D+N + G V+++
Sbjct: 421 QAENDPAWASEIQDDVIEECNKHGGVVHIYV---DKNSPQ----GNVYVKCPSIPAAMAT 473
Query: 350 KNALSGRKFGGNTVNAFYYPEDKYFN 375
NAL GR F + A Y P Y N
Sbjct: 474 VNALHGRWFARKMITAAYVPLPTYHN 499
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 133/334 (39%), Gaps = 51/334 (15%)
Query: 71 VVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP 130
+++ K A+VE + VE AM L+G G+ + V+ PT AAA
Sbjct: 182 IMDNKTRRSKGIAYVEFQDVESVPLAMGLNGQKLFGIPIVVQ-PTQAERNRAAAQNASTS 240
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+ L VG P R++VG L + TE +K + E FG + +L+KD +T
Sbjct: 241 NSTLQRGNVG-----------PMRLYVGSLHFNITEEMLKGIFEPFGKIDKIELIKDMET 289
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSK------------- 237
SKGYGF + D A LNG ++ + + V T + S+
Sbjct: 290 NRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMKVGHVTERTDVSQAPSFLDSEELDRS 349
Query: 238 ------TEQESILAQAQQHIAIQ--KMALQTSGMN--TLGG------GMSLFGETLAKVL 281
T + ++A+ + Q + A+ MN L G + T+A
Sbjct: 350 GIDLGATGRLQLMAKLAEGTGFQIPQAAVNALQMNPAVLPGQPQAAAVAAAAAPTIA-TQ 408
Query: 282 CLTEAITADALADDEEY--EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
C + D L + EEI D+ EEC K+G ++V + R G V+++
Sbjct: 409 CFLLSNMFDPLTETNPSWDEEIRRDVIEECRKHGGALHVYVDRASPE-------GHVYVK 461
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ NAL GR F G + A Y P Y
Sbjct: 462 CPTIASAVASVNALHGRWFAGRIITAAYVPVMSY 495
>gi|67617167|ref|XP_667532.1| U2 snRNP auxiliary factor [Cryptosporidium hominis TU502]
gi|54658687|gb|EAL37312.1| U2 snRNP auxiliary factor [Cryptosporidium hominis]
Length = 438
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 160/401 (39%), Gaps = 68/401 (16%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT--V 90
R V G P + N + + F + V+ I G ++ + + + E F+ + T +
Sbjct: 42 RTVEFGSDPHVFNSETVEIFLTGVILTILGKASNDSEKLKLIEEVVESDFSSLSCSTGLI 101
Query: 91 EEASNAMALDGI--------IFEGVAVRV--------------RRPTDYNPTLAAALGPG 128
N++ +D I +F + +++ RRP Y+
Sbjct: 102 ANLENSIKIDNIFCVTFTSSLFSLICLKLDGHIIDSQNIKLFCRRPNKYS---------- 151
Query: 129 QPSPNLNLAAVGLASGAIGGAEGPD------RVFVGGLPYYFTETQIKELLESFGTLHGF 182
NLN V L + I D + + LP E +I++ LE+ G L
Sbjct: 152 ----NLNNEKV-LDTFIIPRISQYDNFKENEKCILKNLPTDINEEKIRQHLENIGKLKSL 206
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNG------------LKMGDKTLTVRRAT 230
++ D TG KG G +++ ++ A A L+G + +G T+T ++
Sbjct: 207 TIIYDPITGIPKGVGSFEFEESSLCKKAIAILHGKPIESTKNGIWNIYLGSGTITNYKSN 266
Query: 231 ASS-GQSKTEQESILAQAQQHIAIQK----MALQTSGMNTLGGGMSL---FGETLAKVLC 282
QS S + Q +++ I + M LG M GET ++++
Sbjct: 267 KGQFNQSNFSANSSIIQNSEYLHITEIPTSMTYNIFSNPVLGLMMKYSKQVGETPSQIIQ 326
Query: 283 LTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPD--QNGGETPGVGKVFLEY 340
L + L D+E Y L+ +R E YGT++ + PRP + G GKVF+ +
Sbjct: 327 LLNIFLPEELVDNEIYNSTLDSVRSEAEVYGTILEIFCPRPKVIEEFHSCSGAGKVFIYF 386
Query: 341 YDAVGCATAKNALSGRKFGG-NTVNAFYYPEDKYFNKDYSA 380
D A+ +GR F TV+A ++P +KY +YS
Sbjct: 387 SDITAARRAQYQFNGRVFDNIKTVSATFFPLEKYLKHEYSV 427
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
G GP R++VG L + TE ++ + E FG + L+ D DTG SKGYGF + D
Sbjct: 226 GMMGPLRLYVGSLHFNITEEMLRGIFEPFGRIENIQLMVDSDTGRSKGYGFITFADAECA 285
Query: 208 DIACAALNGLKMGDKTLTVRRATASSG------QSKTEQE------------SILAQ--- 246
A LNG ++ + + V T S EQE ++AQ
Sbjct: 286 KKALEQLNGFELAGRPMKVGHVTDRSDAVAPPFPDGEEQERAGADLGSTGRLQLMAQLSE 345
Query: 247 ---------AQQ------HIAIQKMALQTSGMNTLGGGMSLFGETLA-KVLCLTEAITAD 290
AQQ IA+ MA ++ MN G MS+ + LA L+ + +
Sbjct: 346 GTGLPMPPSAQQALQMSGAIALGAMAAVSAAMNP-GLNMSIPSQPLATHCFQLSNMFSPN 404
Query: 291 ALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAK 350
+ +I ++ EEC K+G +V++ + D++ E G V+++ A
Sbjct: 405 SELPPGWELDIQHNVIEECNKHGGVVHIYV---DKDSAE----GNVYIKCPTIPAAMAAV 457
Query: 351 NALSGRKFGGNTVNAFYYPEDKYFN 375
N L GR F G + A Y P Y N
Sbjct: 458 NVLHGRFFNGKLITAAYVPLPTYHN 482
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 52/283 (18%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A LA+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 231 AAALANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYG 290
Query: 198 FCVYQDPAVTDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQE--------- 241
F + D A LNG +K+G T +TASS E E
Sbjct: 291 FITFSDAECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTT 350
Query: 242 ---SILAQAQQHIAIQ-----KMALQTSGMNTL--------------------GGGMSLF 273
++A+ + +Q + ALQ SG ++L
Sbjct: 351 GRLQLMARLAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQALNLP 410
Query: 274 GETLA-KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPG 332
+ +A L+ ++ D EI +D+ EEC K+G ++++ + D+ E
Sbjct: 411 SQPIATHCFQLSNMFNPNSENDHGWEIEIQDDVIEECNKHGGVIHIYV---DKKSAE--- 464
Query: 333 VGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A +AL GR FGG + A Y P Y N
Sbjct: 465 -GNVYVKCPTIPAAMAAVSALHGRWFGGKMITAAYVPLPTYHN 506
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 155/407 (38%), Gaps = 82/407 (20%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGG-----------GMSLFGETLAKVLCLT 284
++A+ + +Q + ALQ SG G + ++V L
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAAKIFFPFFIDLQTRLSQQSEVTALA 416
Query: 285 EAITADALA---------------DDEEYE-EILEDMREECGKYGTLVNVVIPRPDQNGG 328
A + LA D+ ++ EI +D+ EEC K+G ++++ + D+N
Sbjct: 417 AAASVQPLATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYV---DKNSA 473
Query: 329 ETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
+ G V+++ A NAL GR F G + A Y P Y N
Sbjct: 474 Q----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 516
>gi|114794658|pdb|2HZC|A Chain A, Crystal Structure Of The N-terminal Rrm Of The U2af Large
Subunit
Length = 87
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
ARR+YVG +P E+A+ FF+ M +GG + PG+ V+ V IN +K FAF+E R+V+
Sbjct: 6 ARRLYVGNIPFGITEEAMMDFFNAQMR-LGGLTQAPGNPVLAVQINQDKNFAFLEFRSVD 64
Query: 92 EASNAMALDGIIFEGVAVRVRRP 114
E + AMA DGIIF+G ++++RRP
Sbjct: 65 ETTQAMAFDGIIFQGQSLKIRRP 87
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 31/301 (10%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLN-LAA 138
K A+VE T E A++++G+ +G +RV+ Q N AA
Sbjct: 367 KGIAYVEFYTQESVIKALSMNGMSLKGQGIRVQ--------------SSQAEKNRAARAA 412
Query: 139 VGLASGAIGGAEGPDRVFVG---GLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
L A+ A+ P V V G+ +E +++L FG + + ++ D G SKG
Sbjct: 413 KQLQENALKEADNPTTVMVSNLVGVLSNLSEGDLQQLFAPFGNVAEVAVARN-DLGLSKG 471
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
Y + ++ A +NG + + + V T++ + + + + ++
Sbjct: 472 YAYVRFKRWTEAREALNVMNGFDISGQPIKVSYVTSNKRGRGSRLNELGDLDIERLDDEE 531
Query: 256 MALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEY-EEILEDMREECGKYGT 314
L + N + L A + L+ T++ AD+ ++ +EI +D+REEC KYG
Sbjct: 532 AGLISGSSNKIALMKKLQQRVNAANIVLSNMYTSEDYADNNDFFDEIEDDVREECKKYGE 591
Query: 315 LVNVVIPR--PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
+V V + R PD GKV++++ TA +L GR F GNT+ Y +D+
Sbjct: 592 VVKVYLNRRKPD---------GKVYVKFRSNTDAQTAHKSLQGRYFAGNTIQVGYLSDDQ 642
Query: 373 Y 373
+
Sbjct: 643 F 643
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 148/347 (42%), Gaps = 34/347 (9%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR V+V L + + FF +G + V + K +VE+R+++
Sbjct: 248 ARSVFVSQLAARLTARDLGYFFED---KLGEGAVRDARIVTDRISRRSKGIGYVELRSID 304
Query: 92 EASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEG 151
+ A+ L G I G+ + V+ A NLNL S GGA
Sbjct: 305 LVTKALDLSGTIVMGLPIMVQ-------LTEAERNRVHAGENLNLPPG--VSAPQGGAM- 354
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
+++VG L + TE IK++ E FG L DL +D TG SKGY F Y+ +A
Sbjct: 355 --QLYVGSLHFNLTEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMAL 412
Query: 212 AALNGLKMGDKTLTVRRATAS--SGQSKTEQESI-------LAQAQQHIAIQKMALQTSG 262
++G ++ +TL V + ++ T +S+ L A + +QK+A
Sbjct: 413 EQMDGFELAGRTLRVNSVNEKGVAVRNTTTIDSLEDSGGGNLNAASRQALMQKLARIDPP 472
Query: 263 MNTLGGGMSLFGETLA-KVLCLTEAITADALADDEEYEEILEDMREEC-GKYGTLVNVVI 320
++ + + + + L D + + +++ +D++ EC KYG + + I
Sbjct: 473 KSSQPEARKHIPQNQSTRSVLLLNMFDPDEETEPDWDKDLADDVKGECASKYGPVTALKI 532
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ Q G++++++ A ++L+GR FGG VNA +
Sbjct: 533 EKDSQ--------GEIYVQFESVDSAKKAVDSLNGRWFGGRQVNARF 571
>gi|356536627|ref|XP_003536838.1| PREDICTED: uncharacterized protein LOC100810537 [Glycine max]
Length = 735
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 125/301 (41%), Gaps = 75/301 (24%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V QATR RR+Y+ LP A+E+A+ F+ ++ + N + ++ +K
Sbjct: 274 VQLTQATRPIRRLYLENLPASASEKAVMDCFNNLLLSARVNHIQQAQPCICCILHKDKGQ 333
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
A VE T ++AS A++ DG + G V++RRP DY +
Sbjct: 334 ALVEFLTADDASAALSFDGSMLFGSIVKIRRPKDY-----------------------IE 370
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
I G VF G L Y ET++ N+ F Y
Sbjct: 371 LMEIAG------VF-GSLKAYHFETKV----------------------NNGPCAFLEYV 401
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
D +VT ACA LNG+K+G + LTV +A + + ES+ +H K L+
Sbjct: 402 DHSVTIKACAGLNGMKLGGEVLTVLQAMPDASPLENAGESLSYGVPEHA---KPLLRKP- 457
Query: 263 MNTLGGGMSLFGETLAKVLCLTEAITADAL--ADDEEYEEILEDMREECGKYGTL--VNV 318
+VL + AD + D EEIL+D+R EC ++GT+ +NV
Sbjct: 458 ---------------TQVLEINNVFAADTILSLSDMAIEEILDDVRLECARFGTIKSINV 502
Query: 319 V 319
V
Sbjct: 503 V 503
>gi|145523992|ref|XP_001447829.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415351|emb|CAK80432.1| unnamed protein product [Paramecium tetraurelia]
Length = 419
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 270 MSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
M+ + + +L + +T + + DEE+ +I++D++EEC K+GT+ N++IPRP+ G
Sbjct: 275 MARYVQIPTNILVIKNVLTLEDVTIDEEFNDIMDDIKEECSKFGTVKNIIIPRPE-FGKI 333
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
GVGK+F+EY TA+ L+GR +G TV Y +K+ + ++
Sbjct: 334 IIGVGKIFVEYEKTQEARTARRYLAGRMYGDKTVECEYLSREKWAKRQFT 383
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Query: 17 PLMPVQVMTQ---QATRHA-RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVV 72
PL+ +Q + Q QA A R++YVG LPP + + + F +Q + +G +S G ++
Sbjct: 130 PLIQMQRLQQLRAQADVKADRKLYVGNLPPNSQPKELQDFLNQTLLKMGVSSEHAG-SIC 188
Query: 73 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAA 124
N +I+ F F+E R+ EEA+ L +IF+G +++ RP + +LAA
Sbjct: 189 NCWIDSNGHFGFIEFRSPEEATQGFILKDVIFKGHQLKIGRPKSFLTSLAAV 240
>gi|47215490|emb|CAG01598.1| unnamed protein product [Tetraodon nigroviridis]
Length = 463
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L I D L +DEEYE+I++DM+EEC KYG++V+++IPR E PG G+V++E
Sbjct: 369 VLRLINLIDDDHLNNDEEYEDIMDDMKEECQKYGSVVSLLIPR------ENPGKGQVYVE 422
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y ++ A+ L GR F G V A +YP Y
Sbjct: 423 YANSSDSKEAQRLLMGRTFDGKFVVATFYPLSAY 456
>gi|449689952|ref|XP_004212193.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial [Hydra
magnipapillata]
Length = 210
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q T ARR+Y+G +P +E + FF+ M + PG+ V+ IN EK FAF+E
Sbjct: 103 QTTWQARRIYLGNIPFGISEDLMVDFFNAKMRE-SDIARQPGNPVLACQINLEKNFAFLE 161
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNP 119
R+VEE + AMA DGI+ +G A+++RRP DY P
Sbjct: 162 FRSVEETTLAMAFDGIMLQGQALKIRRPKDYQP 194
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 57/288 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G GP R++VG L + TE ++ + E FG + L+ D +T SKGYG
Sbjct: 238 AAAMANNLQKGNAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYG 297
Query: 198 FCVYQDPAVTDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQE--------- 241
F + D A LNG +K+G+ T +TASS E E
Sbjct: 298 FISFADAECAKKALEQLNGFELAGRPMKVGNVTERTDSSTASSFLDNDELERTGIDLGTT 357
Query: 242 ---SILAQAQQHIAIQ-----KMALQTSG--------MNTLGGGMSL------FGETLAK 279
++A+ + +Q + ALQ SG + G ++ G ++ +
Sbjct: 358 GRLQLMARLAEGTGLQIPPAAQQALQMSGSMHSSSIHFGNMAAGTAIANPALNLGPSMNQ 417
Query: 280 VLCL-TEAITADAL------ADDEEYE-----EILEDMREECGKYGTLVNVVIPRPDQNG 327
+ L T+ + L + E E EI +D+ EEC K+G +V++ + D+N
Sbjct: 418 AMNLPTQPLATHCLQLSNMFSPQSENEPGWDIEIQDDVMEECNKHGGIVHIYV---DKNS 474
Query: 328 GETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
+ G V+++ A NAL GR F G + A Y P Y N
Sbjct: 475 PQ----GNVYVKCPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTYHN 518
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 146/356 (41%), Gaps = 44/356 (12%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEE 92
R V+V L + + FF + +G + V + K +VE+R+++
Sbjct: 200 RSVFVTQLAARLTARDLGYFFEE---KLGDGAVRDARIVTDRLSRRSKGIGYVELRSLDL 256
Query: 93 ASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGP 152
S A+AL G + G+ ++V+ L A S +L + L G + GP
Sbjct: 257 VSKAIALTGTVVMGLPIKVQ--------LTEAERNRIHSGDL----LNLPPGVTATSHGP 304
Query: 153 DRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACA 212
+++VG L + TE +IK++ E FG L DL +D TG SKGY F Y+ P +A
Sbjct: 305 MQLYVGSLHFQLTEEEIKQVFEPFGELEFVDLHRDPATGRSKGYCFIQYRRPEDAKMALE 364
Query: 213 ALNGLKMGDKTLTVR-----------------RATASSGQSKTEQESILAQAQQHIAIQK 255
++G ++ + L V RA ++ +S E L + +QK
Sbjct: 365 QMDGFELAGRQLRVNTVHEKGVAAPGGVGMSLRAMGNTAESLDEGGGNLNAVSRQALMQK 424
Query: 256 MALQTSGMNTL--GGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC-GKY 312
+A L G + + L A D + + + ED+ EC K+
Sbjct: 425 LARTNEPQIPLPVSGPKINIKSQETRCILLKNAFDPAEETDPDWDKNLQEDVVAECESKF 484
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNA-LSGRKFGGNTVNAFY 367
V ++ D G+++++ D++ A A L GR FGG ++A Y
Sbjct: 485 QGRVEKIVVEKDSK-------GEIYIQ-CDSIDMAKRAVANLDGRWFGGRQISASY 532
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 128/328 (39%), Gaps = 61/328 (18%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE R VE A A+ L G GV +++++ ++A P P P+
Sbjct: 9 KGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSAT--PSLPRPSQQ---- 62
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
GP ++++G L Y TE +K + E FG + L+KD T S+GYGF
Sbjct: 63 ---------NRGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFV 113
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y + A LNG ++ + + V T ++E + A + L
Sbjct: 114 TYVNSDDAKKALDQLNGFELAGRPMKVNHVT-----ERSEYACLSALDNDEADRSGVDLG 168
Query: 260 TSGMNTL------GGGMSLFGETLAKV------------------------LCLTEAITA 289
T+G L G G+ + LA++ +C + +
Sbjct: 169 TTGRLALMAKLAEGTGLEIPKAALAQLHIGQNNPILGSAGSVSSSSAIAPPVCTQCFMLS 228
Query: 290 DA----LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVG 345
+ +A +EEI +D+ EEC K G +++ + R T G V+++
Sbjct: 229 NMFDPHVATHSVFEEIRDDVIEECTKAGGCLHIFVDR-------TSAQGNVYVKCPSIAV 281
Query: 346 CATAKNALSGRKFGGNTVNAFYYPEDKY 373
N L GR F G + A Y P Y
Sbjct: 282 ATQCVNMLHGRYFSGRLITAAYVPLINY 309
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 146/396 (36%), Gaps = 63/396 (15%)
Query: 6 LPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
LPFG G PL R AR V+ L + + FFS S
Sbjct: 125 LPFGK---GVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFS---------SV 172
Query: 66 GPGDAVVNVYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA 122
G V + N ++F A+VE + E + A+ L G GV + V+ T A
Sbjct: 173 GKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQH------TQA 226
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
G PNL G GP R++VG L + TE ++ + E FG +
Sbjct: 227 EKNRMGNSMPNL----------MPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNI 276
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQSKT 238
L+ D +TG SKGYGF +++ A LNG ++ + + V R G S
Sbjct: 277 QLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLL 336
Query: 239 EQESILAQAQQHIAIQKMAL---------------------QTSGMNTLGGGMSLFGETL 277
+ + + A ++ L M+T
Sbjct: 337 DTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMSTPQPPPQAAPPIA 396
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
+ L+ + +EI +D+ EEC K+G +++V + DQ + G V+
Sbjct: 397 TQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYV---DQASPQ----GNVY 449
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
++ A N+L GR F G + A Y P Y
Sbjct: 450 VKCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNY 485
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 146/396 (36%), Gaps = 63/396 (15%)
Query: 6 LPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
LPFG G PL R AR V+ L + + FFS S
Sbjct: 125 LPFGK---GVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFS---------SV 172
Query: 66 GPGDAVVNVYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA 122
G V + N ++F A+VE + E + A+ L G GV + V+ T A
Sbjct: 173 GKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQH------TQA 226
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
G PNL G GP R++VG L + TE ++ + E FG +
Sbjct: 227 EKNRMGNSMPNL----------MPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNI 276
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQSKT 238
L+ D +TG SKGYGF +++ A LNG ++ + + V R G S
Sbjct: 277 QLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLL 336
Query: 239 EQESILAQAQQHIAIQKMAL---------------------QTSGMNTLGGGMSLFGETL 277
+ + + A ++ L M+T
Sbjct: 337 DTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMSTPQPPPQAAPPIA 396
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
+ L+ + +EI +D+ EEC K+G +++V + DQ + G V+
Sbjct: 397 TQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYV---DQASPQ----GNVY 449
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
++ A N+L GR F G + A Y P Y
Sbjct: 450 VKCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNY 485
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 129/328 (39%), Gaps = 61/328 (18%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE R VE A A+ L G GV +++++ ++A P P P+
Sbjct: 9 KGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSAT--PSLPRPSQQ---- 62
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+GP ++++G L Y TE +K + E FG + L+KD T S+GYGF
Sbjct: 63 ---------NKGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFV 113
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
Y + A LNG ++ + + V T ++E + A + L
Sbjct: 114 TYVNSDDAKKALDQLNGFELAGRPMKVNHVT-----ERSEYACLSALDNDEADRSGVDLG 168
Query: 260 TSGMNTL------GGGMSLFGETLAKV------------------------LCLTEAITA 289
T+G L G G+ + LA++ +C + +
Sbjct: 169 TTGRLALMAKLAEGTGLEIPKAALAQLHIGQNNPILGSAGSVSSSSAIAPPVCTQCFMLS 228
Query: 290 DA----LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVG 345
+ +A +EEI +D+ EEC K G +++ + R T G V+++
Sbjct: 229 NMFDPHVATHSVFEEIRDDVIEECTKAGGCLHIFVDR-------TSAQGNVYVKCPSIAV 281
Query: 346 CATAKNALSGRKFGGNTVNAFYYPEDKY 373
N L GR F G + A Y P Y
Sbjct: 282 ATQCVNMLHGRYFSGRLITAAYVPLINY 309
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 146/396 (36%), Gaps = 63/396 (15%)
Query: 6 LPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
LPFG G PL R AR V+ L + + FFS S
Sbjct: 137 LPFGK---GVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFS---------SV 184
Query: 66 GPGDAVVNVYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA 122
G V + N ++F A+VE + E + A+ L G GV + V+ T A
Sbjct: 185 GKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQH------TQA 238
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
G PNL G GP R++VG L + TE ++ + E FG +
Sbjct: 239 EKNRMGNSMPNL----------MPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNI 288
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQSKT 238
L+ D +TG SKGYGF +++ A LNG ++ + + V R G S
Sbjct: 289 QLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLL 348
Query: 239 EQESILAQAQQHIAIQKMAL---------------------QTSGMNTLGGGMSLFGETL 277
+ + + A ++ L M+T
Sbjct: 349 DTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMSTPQPPPQAAPPIA 408
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
+ L+ + +EI +D+ EEC K+G +++V + DQ + G V+
Sbjct: 409 TQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYV---DQASPQ----GNVY 461
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
++ A N+L GR F G + A Y P Y
Sbjct: 462 VKCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNY 497
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 49/280 (17%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 78 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 137
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 138 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 197
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK-------------- 279
+ ++A+ + +Q + ALQ SG G L +
Sbjct: 198 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 257
Query: 280 --VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGK 335
C + + ++E EI +D+ EEC K+G ++++ + D+N + G
Sbjct: 258 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GN 310
Query: 336 VFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
V+++ A NAL GR F G + A Y P Y N
Sbjct: 311 VYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 350
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 146/396 (36%), Gaps = 63/396 (15%)
Query: 6 LPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
LPFG G PL R AR V+ L + + FFS S
Sbjct: 149 LPFGK---GVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFS---------SV 196
Query: 66 GPGDAVVNVYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA 122
G V + N ++F A+VE + E + A+ L G GV + V+ T A
Sbjct: 197 GKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQH------TQA 250
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
G PNL G GP R++VG L + TE ++ + E FG +
Sbjct: 251 EKNRMGNSMPNL----------MPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNI 300
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQSKT 238
L+ D +TG SKGYGF +++ A LNG ++ + + V R G S
Sbjct: 301 QLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLL 360
Query: 239 EQESILAQAQQHIAIQKMAL---------------------QTSGMNTLGGGMSLFGETL 277
+ + + A ++ L M+T
Sbjct: 361 DTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMSTPQPPPQAAPPIA 420
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
+ L+ + +EI +D+ EEC K+G +++V + DQ + G V+
Sbjct: 421 TQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYV---DQASPQ----GNVY 473
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
++ A N+L GR F G + A Y P Y
Sbjct: 474 VKCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNY 509
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 49/287 (17%)
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
SP A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +T
Sbjct: 136 SPAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSET 195
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------- 236
G SKGYGF + D A LNG ++ + + V R ASS S
Sbjct: 196 GRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERT 255
Query: 237 -----KTEQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK------- 279
T + ++A+ + +Q + ALQ SG G L +
Sbjct: 256 GIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALA 315
Query: 280 ---------VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGG 328
C + + ++E EI +D+ EEC K+G ++++ + D+N
Sbjct: 316 AAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSA 372
Query: 329 ETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
+ G V+++ A NAL GR F G + A Y P Y N
Sbjct: 373 Q----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 415
>gi|410930137|ref|XP_003978455.1| PREDICTED: serine/threonine-protein kinase Kist-like [Takifugu
rubripes]
Length = 433
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L I L +DEEYE+I++DM+EEC KYG++V+++IPR E PG G+VF+E
Sbjct: 336 VLRLINLIDDSHLNNDEEYEDIMDDMKEECQKYGSVVSLLIPR------ENPGKGQVFVE 389
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y ++ A+ L GR F G V A +YP Y
Sbjct: 390 YANSGDSKEAQRLLMGRTFDGKFVVATFYPSSAY 423
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 138 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 190
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 191 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 233
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 234 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 293
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 294 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 353
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 354 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 413
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 414 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 466
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 467 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 504
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 147 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 199
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 200 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 242
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 243 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 302
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 303 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 362
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 363 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 422
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 423 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 475
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 476 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 513
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 416
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 417 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 469
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 470 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 507
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 49/280 (17%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 202 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 261
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 262 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 321
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK-------------- 279
+ ++A+ + +Q + ALQ SG G L +
Sbjct: 322 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 381
Query: 280 --VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGK 335
C + + ++E EI +D+ EEC K+G ++++ + D+N + G
Sbjct: 382 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GN 434
Query: 336 VFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
V+++ A NAL GR F G + A Y P Y N
Sbjct: 435 VYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 474
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 416
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 417 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 469
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 470 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 507
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 49/280 (17%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 218 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 277
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 278 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 337
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK-------------- 279
+ ++A+ + +Q + ALQ SG G L +
Sbjct: 338 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 397
Query: 280 --VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGK 335
C + + ++E EI +D+ EEC K+G ++++ + D+N + G
Sbjct: 398 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GN 450
Query: 336 VFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
V+++ A NAL GR F G + A Y P Y N
Sbjct: 451 VYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 490
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 218 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 270
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 271 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 313
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 314 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 373
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 374 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 433
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 434 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 493
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 494 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 546
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 547 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 584
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 134/337 (39%), Gaps = 57/337 (16%)
Query: 71 VVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP 130
+++ K A+VE + VE AM L+G G+ + V+ PT AAA
Sbjct: 170 IMDNKTRRSKGIAYVEFQDVESVPLAMGLNGQKLFGIPIVVQ-PTQAERNRAAAQNASTS 228
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+ L VG P R++VG L + TE +K + E FG + +L+KD +T
Sbjct: 229 NSTLQRGNVG-----------PMRLYVGSLHFNITEEMLKGIFEPFGKIDKIELIKDMET 277
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSK------------- 237
SKGYGF + D A LNG ++ + + V T + S+
Sbjct: 278 NRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMKVGHVTERTDVSQAPSFLDSEELDRS 337
Query: 238 ------TEQESILAQAQQHIAIQ--KMALQTSGMN--TLGG------GMSLFGETLAKVL 281
T + ++A+ + Q + A+ MN L G + T+A
Sbjct: 338 GIDLGATGRLQLMAKLAEGTGFQIPQAAVNALQMNPAVLPGQPQAAAVAAAAAPTIA-TQ 396
Query: 282 CLTEAITADALAD-----DEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKV 336
C + D L + DEE I D+ EEC K+G ++V + R G V
Sbjct: 397 CFLLSNMFDPLTETNPSWDEE---IRRDVIEECRKHGGALHVYVDRASPE-------GHV 446
Query: 337 FLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+++ + NAL GR F G + A Y P Y
Sbjct: 447 YVKCPTIASAVASVNALHGRWFAGRIITAAYVPVMSY 483
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 49/280 (17%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 234 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 293
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 294 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 353
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK-------------- 279
+ ++A+ + +Q + ALQ SG G L +
Sbjct: 354 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 413
Query: 280 --VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGK 335
C + + ++E EI +D+ EEC K+G ++++ + D+N + G
Sbjct: 414 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GN 466
Query: 336 VFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
V+++ A NAL GR F G + A Y P Y N
Sbjct: 467 VYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 506
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 155/404 (38%), Gaps = 79/404 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 40 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 92
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 93 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 135
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 136 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 195
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 196 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 255
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE-------- 285
++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 256 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 315
Query: 286 -----AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 316 SVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ-- 370
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 371 --GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 412
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 148/396 (37%), Gaps = 63/396 (15%)
Query: 6 LPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
LPFG G PL R AR V+ L + + FFS S
Sbjct: 123 LPFGK---GVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFS---------SV 170
Query: 66 GPGDAVVNVYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA 122
G V + N ++F A+VE + E + A+ L G GV + V+ T A
Sbjct: 171 GKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQH------TQA 224
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
G PNL G GP R++VG L + TE ++ + E FG +
Sbjct: 225 EKNRMGNSMPNL----------MPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNI 274
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQSKT 238
L+ D +TG SKGYGF +++ A LNG ++ + + V R G S
Sbjct: 275 QLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLL 334
Query: 239 EQESILAQAQQHIAIQKMAL---------------------QTSGMNTLGGGMSLFGETL 277
+ + + + A ++ L M+T +
Sbjct: 335 DTDELDRSGIELGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMSTPQPPPQVAPPIA 394
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
+ L+ + +EI +D+ EEC K+G +++V + DQ + G V+
Sbjct: 395 TQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYV---DQASPQ----GNVY 447
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
++ A N+L GR F G + A Y P Y
Sbjct: 448 VKCPSIGTAVAAVNSLHGRWFAGRVITAAYVPVVNY 483
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 49/280 (17%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 239 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 298
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 299 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 358
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK-------------- 279
+ ++A+ + +Q + ALQ SG G L +
Sbjct: 359 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 418
Query: 280 --VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGK 335
C + + ++E EI +D+ EEC K+G ++++ + D+N + G
Sbjct: 419 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GN 471
Query: 336 VFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
V+++ A NAL GR F G + A Y P Y N
Sbjct: 472 VYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 511
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 44/363 (12%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ ++ AR V+V L + + FF + G A +V I+
Sbjct: 241 PLAEEPREDDSEARSVFVSQLAARLTARDLGYFFEDKL----GEGAVMDSRIVTDRISRR 296
Query: 80 KK-FAFVEMRTVEEASNAMALDGIIFEGVAVRVRR-PTDYNPTLAA---ALGPGQPSPNL 134
K +VE RT+E A+ L G I G+ ++V+ + N T A L PG
Sbjct: 297 SKGIGYVEFRTIELVEKAIGLSGTIVMGLPIQVQHTEAERNRTHAGDSLHLPPG------ 350
Query: 135 NLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK 194
S GG + ++VG L + TE+ I+++ E FG L DL +D TG SK
Sbjct: 351 -------VSSHHGGMQ----LYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSK 399
Query: 195 GYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESI-------LAQA 247
GY F Y+ +A + G ++ +TL V T QES+ L A
Sbjct: 400 GYAFVQYKRGEDAKMALEQMEGFELAGRTLRVNTVHEKGNVRYTPQESLDDTGGGNLNAA 459
Query: 248 QQHIAIQKMAL--QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDM 305
+ +QK+A Q + ++ +K + L + + + +E+ +D+
Sbjct: 460 SRQALMQKLARTDQPAARPQPIMKPNIPQSMQSKSVLLKNMFNPEEETERDWDKELADDV 519
Query: 306 REEC-GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVN 364
+ E KYG + + + R Q G++++++ A L GR FGG V+
Sbjct: 520 KNEVEDKYGDVNFIKVERESQ--------GEIYVKFDSIESAKKAIEGLHGRWFGGRQVS 571
Query: 365 AFY 367
A +
Sbjct: 572 AAF 574
>gi|432855875|ref|XP_004068316.1| PREDICTED: serine/threonine-protein kinase Kist-like [Oryzias
latipes]
Length = 435
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L I L ++EEYE+I+EDM+EEC KYG++V+++IP+ E PG G+VF+E
Sbjct: 338 VLRLLNLIDDSHLHNEEEYEDIMEDMKEECQKYGSVVSLLIPK------ENPGKGQVFVE 391
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y ++ A+ L+GR F G V A +YP Y
Sbjct: 392 YANSSDSKEAQRLLTGRTFDGKFVVATFYPLSAY 425
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 51/270 (18%)
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF + D
Sbjct: 220 GLTGPMRLYVGSLHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECA 279
Query: 208 DIACAALNGLKMGDKTLTV----RRATASSGQSKTEQES---------------ILAQAQ 248
A LNG ++ + + V R SS S + + ++A+
Sbjct: 280 KKALEQLNGFELAGRPMKVGHVTERTDPSSAPSILDNDELERSGIDLGTTGRLQLMARLA 339
Query: 249 QHIAIQ-----KMALQTS-------------------GMNTLGGGMSLFGETLAKVLCLT 284
+ +Q + ALQ S +N G ++L + LA
Sbjct: 340 EGTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPSLNVNMNSGALNLPSQPLATHCFQL 399
Query: 285 EAITADALADDEEYE-EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDA 343
+ + + +E +I D+ EEC K+G +V++ + D+N E G V+++
Sbjct: 400 SNMFNPSSENTFGWEVDIQRDVIEECNKHGGVVHIYV---DKNSAE----GNVYVKCPSI 452
Query: 344 VGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+A NAL GR FGG + A Y P Y
Sbjct: 453 PAAMSAVNALHGRFFGGKMITAAYVPLPTY 482
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 155/404 (38%), Gaps = 79/404 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 108 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 160
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 161 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 203
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 204 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 263
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 264 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 323
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE-------- 285
++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 324 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 383
Query: 286 -----AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 384 SVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ-- 438
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 439 --GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 480
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 147 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 199
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 200 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 242
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 243 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 302
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 303 TFSDSECAKKALEQLNGFELTGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 362
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 363 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 422
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 423 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 475
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 476 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 513
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 139/372 (37%), Gaps = 60/372 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS S G V + N ++F A+VE
Sbjct: 145 RDARTVFCMQLSQRIRARDLEDFFS---------SVGKVQDVRLITCNKTRRFKGIAYVE 195
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+ E + A+ L G GV + V+ T A G PNL
Sbjct: 196 FKDPESVTLALGLSGQKLLGVPIVVQH------TQAEKNRMGNSMPNL----------MP 239
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF +++
Sbjct: 240 KGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 299
Query: 207 TDIACAALNGLKMGDKTLTV----RRATASSGQSKTEQESILAQAQQHIAIQKMAL---- 258
A LNG ++ + + V R G S + + + A ++ L
Sbjct: 300 AKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTDELDRSGIDLGATGRLQLMFKL 359
Query: 259 -----------------QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEI 301
M+T + L+ + +EI
Sbjct: 360 AEGTGLEIPPAAANALNMAPVMSTPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEI 419
Query: 302 LEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
+D+ EEC K+G +++V + DQ + G V+++ A N+L GR F G
Sbjct: 420 RDDVIEECNKHGGVLHVYV---DQASPQ----GNVYVKCPSIATAVAAVNSLHGRWFAGR 472
Query: 362 TVNAFYYPEDKY 373
+ A Y P Y
Sbjct: 473 VITAAYVPVVNY 484
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 211 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 270
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 271 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 330
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 331 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 390
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 391 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 447
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 448 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 489
>gi|301088364|ref|XP_002996880.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110854|gb|EEY68906.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 96
Score = 82.0 bits (201), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 283 LTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYD 342
+ ++ D L DDEEY ++ ED+ EEC ++G + + IPRP ++G E PG+G +++ +
Sbjct: 1 MANMVSIDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRP-KDGEEVPGLGCIYVRFGK 59
Query: 343 AVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+A AL+GRKFGGN V Y+P DK+
Sbjct: 60 EEDAVSALKALNGRKFGGNIVKVTYFPVDKF 90
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 209 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 268
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 269 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 328
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 329 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 388
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 389 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 445
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 446 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 487
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 119 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 171
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 214
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 215 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 274
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 275 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 334
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 335 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 394
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 395 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 447
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 448 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 485
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 208 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 267
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 268 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 327
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 328 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 387
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 388 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 444
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 445 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 486
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 49/280 (17%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 78 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 137
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 138 FITFSDSECAKKALEQLNGFELTGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 197
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK-------------- 279
+ ++A+ + +Q + ALQ SG G L +
Sbjct: 198 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 257
Query: 280 --VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGK 335
C + + ++E EI +D+ EEC K+G ++++ + D+N + G
Sbjct: 258 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GN 310
Query: 336 VFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
V+++ A NAL GR F G + A Y P Y N
Sbjct: 311 VYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 350
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 119 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 171
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 214
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 215 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 274
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 275 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 334
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 335 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 394
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 395 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 447
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 448 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 485
>gi|395863338|ref|XP_003803853.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
gi|395863342|ref|XP_003803855.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
Length = 487
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 154/403 (38%), Gaps = 78/403 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 99 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEAFFSTV------GKVRDVRMISDRNARRS 151
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + VR Q N A
Sbjct: 152 KGIAYVEFVDVSSVPLAIGLTGQRVFGVPILVR--------------ASQAEKN---RAA 194
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G GP R++VG L TE ++ + E FG L L+KD +TG SKGYGF
Sbjct: 195 AMANNLQKGRAGPMRLYVGSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFI 254
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRR-------ATASSGQSKTEQE----------- 241
+ D A LNGL++ + + V +TASS + E E
Sbjct: 255 TFSDSECAKKALEQLNGLELAGRPMKVGHVTEGTDASTASSFLNSDELERTGIDLGTAGG 314
Query: 242 -SILAQAQQHIAIQ--KMALQTSGMNT--LGGGMSLFGETLAKVLCLTEAITADALA--- 293
+A+ + +Q A Q MN+ G + F L + L++ A LA
Sbjct: 315 LQFMARLAEGTGLQIPPAAQQALQMNSPLAFGATAEFSFRLDLLTRLSQQTQASDLAAAA 374
Query: 294 ------------------DDEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETPG 332
EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 375 SVQPLATQCFQLSNMFNPQTEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ--- 428
Query: 333 VGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A +AL GR F G + A Y P Y N
Sbjct: 429 -GNVYVKCPSIAAAVAAVSALHGRWFAGKMITAAYVPLPTYHN 470
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 155/404 (38%), Gaps = 79/404 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 124 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 176
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 177 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 219
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 220 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 279
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 280 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 339
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE-------- 285
++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 340 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 399
Query: 286 -----AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 400 SVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ-- 454
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 455 --GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 496
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 226 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 285
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 286 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 345
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 346 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 405
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 406 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 462
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 463 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 504
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 148/395 (37%), Gaps = 64/395 (16%)
Query: 7 PFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAG 66
PFG G PL +T + R AR V+ L + + FFS S G
Sbjct: 149 PFGK---GVSPLGINDELTPEE-RDARTVFCMQLSQRIRARDLEDFFS---------SVG 195
Query: 67 PGDAVVNVYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
V + N ++F A+VE + E + A+ L G GV + V+ T A
Sbjct: 196 KVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQH------TQAE 249
Query: 124 ALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFD 183
G PNL G GP R++VG L + TE ++ + E FG +
Sbjct: 250 KNRMGNSMPNL----------MPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQ 299
Query: 184 LVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQSKTE 239
L+ D +TG SKGYGF +++ A LNG ++ + + V R G S +
Sbjct: 300 LIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLD 359
Query: 240 QESILAQAQQHIAIQKMAL---------------------QTSGMNTLGGGMSLFGETLA 278
+ + A ++ L M+T
Sbjct: 360 TDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMSTPQPPPQAAPPIAT 419
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFL 338
+ L+ + +EI +D+ EEC K+G +++V + DQ + G V++
Sbjct: 420 QCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYV---DQASPQ----GNVYV 472
Query: 339 EYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ A N+L GR F G + A Y P Y
Sbjct: 473 KCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNY 507
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 78 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 137
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 138 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDGLERTGIDLGTT 197
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 198 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 257
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 258 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 314
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 315 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 356
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELTGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 416
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 417 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 469
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 470 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 507
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 78 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 137
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 138 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 197
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 198 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 257
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 258 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 314
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 315 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 356
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 204 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 263
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 264 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 323
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 324 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 383
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 384 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 440
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 441 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 482
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 78 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 137
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 138 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 197
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 198 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 257
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 258 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 314
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 315 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 356
>gi|255575831|ref|XP_002528813.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223531725|gb|EEF33547.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 844
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 74/300 (24%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V QATR RR+YV +P A+E+A+ + ++ + G N ++ I+ EK
Sbjct: 393 VQLTQATRPMRRLYVENIPAEASEKAVLERLNNLLISSGVNHIQGTQPCISCIIHKEKGQ 452
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
A VE T E+AS A++ DG F G +++RRP D+ +A+ GP L A
Sbjct: 453 ALVEFLTPEDASAALSFDGSYFSGSTIKIRRPKDFIMEIASTFGP--------LKA---- 500
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
Y+F E+ ++G F Y
Sbjct: 501 -------------------YHF---------ENIDDVNG-------------PCAFVEYA 519
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTE-QESILAQAQQHIAIQKMALQTS 261
D +VT ACA LNG+K+G + ++ + ++ + + ++ +Q + Q
Sbjct: 520 DQSVTFRACAGLNGMKLGGQVISAVQVIPNASTLEIDGKQPFYGVPEQAKPLLDKPTQVL 579
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL--VNVV 319
+ L +L +L+++ E EE+LED+R EC ++GT+ VNVV
Sbjct: 580 KLKNLFDPETL--PSLSRI----------------EIEEVLEDVRLECARFGTVKSVNVV 621
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 235 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 294
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 295 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 354
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 355 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 414
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 415 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 471
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 472 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 513
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 51/270 (18%)
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF + D
Sbjct: 247 GLTGPMRLYVGSLHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECA 306
Query: 208 DIACAALNGLKMGDKTLTV----RRATASSGQSKTEQES---------------ILAQAQ 248
A LNG ++ + + V R SS S + + ++A+
Sbjct: 307 KKALEQLNGFELAGRPMKVGHVTERTDPSSAPSILDNDELERSGIDLGTTGRLQLMARLA 366
Query: 249 QHIAIQ-----KMALQTS-------------------GMNTLGGGMSLFGETLAKVLCLT 284
+ +Q + ALQ S +N G ++L + LA
Sbjct: 367 EGTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPSLNVNMNSGALNLPSQPLATHCFQL 426
Query: 285 EAITADALADDEEYE-EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDA 343
+ + + +E +I D+ EEC K+G +V++ + D+N E G V+++
Sbjct: 427 SNMFNPSSENTFGWEVDIQRDVIEECNKHGGVVHIYV---DKNSAE----GNVYVKCPSI 479
Query: 344 VGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+A NAL GR FGG + A Y P Y
Sbjct: 480 PAAMSAVNALHGRFFGGKMITAAYVPLPTY 509
>gi|428182175|gb|EKX51036.1| hypothetical protein GUITHDRAFT_134574 [Guillardia theta CCMP2712]
Length = 458
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 166/407 (40%), Gaps = 59/407 (14%)
Query: 8 FGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP 67
G T + L+ + M + R+ R+YVG L E + F GP
Sbjct: 75 LGLTVIAQLALVTIAGMVKPPQRN--RLYVGSLHFDLKEADVRAIFQPF---------GP 123
Query: 68 GDAVVNVY---INHEKKFAFVE-MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+ Y K +AF+E M + + A+DG + G ++V RP +N A
Sbjct: 124 IKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKAMDGFMIAGRPIKVGRP--HNTVSAN 181
Query: 124 A----------------LGPGQPSPNLNLAAVGLASGAIGG----AEGPDRVFVGGLPYY 163
A L P PS A + A A P R+++G + +
Sbjct: 182 APVHRRLFFLLNFSSVDLQPWPPSLPQQAALAAQKAQAQPLNTPVAGPPARIYIGSVLFD 241
Query: 164 FTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ--DPAVTDIACAALNGLKMG- 220
E+++K++ + FG++ ++ + + G KGYGF Y+ D AV A A+NG ++
Sbjct: 242 VKESEVKQIFQVFGSIKQISMIPNPENGKHKGYGFIEYEKHDDAVQ--AIQAMNGFQLAG 299
Query: 221 -----DKTLTVRRATASSGQSKTEQESILAQAQQHIAI--QKMALQTSGMNTLGGGMSLF 273
DKT A++ + S++ + I + L S + M
Sbjct: 300 RPLKEDKTSNPIIVAAANAIADKVTTSLVTSSSNDITTVEDEENLSVSSVLQRKEIMCKL 359
Query: 274 GETLAKVLCLTEAITADALADDEEYEEILE-DMREECGKYGTLVNVVIPRPDQNGGETPG 332
++V+ L + + E+ + +LE ++ EEC K+G + V+I + G
Sbjct: 360 ANRPSRVVLLKN------MVEPEDVDPLLEQEIAEECSKFGKVNKVLIVTMVEQGSR--- 410
Query: 333 VGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
+ KVF+E+ D A L R FGG VNA Y E+++ +D S
Sbjct: 411 LVKVFVEFGDQEAATKAVARLDKRWFGGKIVNASTYEEERFVRQDLS 457
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 155/404 (38%), Gaps = 79/404 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE-------- 285
++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 416
Query: 286 -----AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 417 SVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ-- 471
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 472 --GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 513
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 155/404 (38%), Gaps = 79/404 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE-------- 285
++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 416
Query: 286 -----AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 417 SVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ-- 471
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 472 --GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 513
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 235 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 294
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 295 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 354
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 355 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 414
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 415 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 471
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 472 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 513
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 154/403 (38%), Gaps = 78/403 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 126 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEAFFSTV------GKVRDVRMISDRNARRS 178
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + VR Q N A
Sbjct: 179 KGIAYVEFVDVSSVPLAIGLTGQRVFGVPILVR--------------ASQAEKN---RAA 221
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G GP R++VG L TE ++ + E FG L L+KD +TG SKGYGF
Sbjct: 222 AMANNLQKGRAGPMRLYVGSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFI 281
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRR-------ATASSGQSKTEQE----------- 241
+ D A LNGL++ + + V +TASS + E E
Sbjct: 282 TFSDSECAKKALEQLNGLELAGRPMKVGHVTEGTDASTASSFLNSDELERTGIDLGTAGG 341
Query: 242 -SILAQAQQHIAIQ--KMALQTSGMNT--LGGGMSLFGETLAKVLCLTEAITADALA--- 293
+A+ + +Q A Q MN+ G + F L + L++ A LA
Sbjct: 342 LQFMARLAEGTGLQIPPAAQQALQMNSPLAFGATAEFSFRLDLLTRLSQQTQASDLAAAA 401
Query: 294 ------------------DDEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETPG 332
EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 402 SVQPLATQCFQLSNMFNPQTEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ--- 455
Query: 333 VGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A +AL GR F G + A Y P Y N
Sbjct: 456 -GNVYVKCPSIAAAVAAVSALHGRWFAGKMITAAYVPLPTYHN 497
>gi|115495227|ref|NP_001070127.1| serine/threonine-protein kinase Kist [Danio rerio]
gi|115313546|gb|AAI24287.1| Zgc:153241 [Danio rerio]
gi|182890586|gb|AAI64787.1| Zgc:153241 protein [Danio rerio]
Length = 410
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L I L +++EYE+I+EDM+EEC KYGT+V+++IP+ E PG G+VF+E
Sbjct: 313 VLRLLNVIDDSHLYNEDEYEDIIEDMKEECQKYGTVVSLLIPK------ENPGKGQVFVE 366
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
Y +A A+ L+GR F G V A +YP
Sbjct: 367 YANAGDSKEAQRLLTGRTFDGKFVVATFYP 396
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 147/396 (37%), Gaps = 63/396 (15%)
Query: 6 LPFGATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA 65
LPFG G PL R AR V+ L + + FFS S
Sbjct: 123 LPFGK---GVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFS---------SV 170
Query: 66 GPGDAVVNVYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLA 122
G V + N ++F A+VE + E + A+ L G GV + V+ T A
Sbjct: 171 GKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQH------TQA 224
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGF 182
G PNL G GP R++VG L + TE ++ + E FG +
Sbjct: 225 EKNRMGNSMPNL----------MPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNI 274
Query: 183 DLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQSKT 238
L+ D TG SKGYGF +++ A LNG ++ + + V R G S
Sbjct: 275 QLIMDPXTGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLL 334
Query: 239 EQESILAQAQQHIAIQKMAL---------------------QTSGMNTLGGGMSLFGETL 277
+ + + + A ++ L M+T +
Sbjct: 335 DTDELDRSGIELGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMSTPQPPPQVAPPIA 394
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
+ L+ + +EI +D+ EEC K+G +++V + DQ + G V+
Sbjct: 395 TQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYV---DQASPQ----GNVY 447
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
++ A N+L GR F G + A Y P Y
Sbjct: 448 VKCPSIGTAVAAVNSLHGRWFAGRVITAAYVPVVNY 483
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 150/398 (37%), Gaps = 73/398 (18%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 119 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 171
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 214
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 215 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 274
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 275 TFSDSECAKKALEQLNGFELTGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 334
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK---------------- 279
++A+ + +Q + ALQ SG G L +
Sbjct: 335 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 394
Query: 280 VLCLTEAITADALADDE--EYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVF 337
C + + ++E EI +D+ EEC K+G ++++ + D+N + G V+
Sbjct: 395 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ----GNVY 447
Query: 338 LEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
++ A NAL GR F G + A Y P Y N
Sbjct: 448 VKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 485
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 78 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 137
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 138 FITFSDSECAKKALEQLNGFELTGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 197
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 198 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 257
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 258 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 314
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 315 ----GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 356
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 155/404 (38%), Gaps = 79/404 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 297 TFSDSECAKKALEQLNGFELTGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 356
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE-------- 285
++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 357 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 416
Query: 286 -----AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 417 SVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ-- 471
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 472 --GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 513
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 155/404 (38%), Gaps = 79/404 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 119 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 171
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 214
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 215 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 274
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 275 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 334
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE-------- 285
++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 335 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 394
Query: 286 -----AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 395 SVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ-- 449
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 450 --GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 491
>gi|66475436|ref|XP_627534.1| splicing factor U2AF U2 snRNP auxiliary factor large subunit; 3 RRM
domains [Cryptosporidium parvum Iowa II]
gi|32398751|emb|CAD98711.1| splicing factor, possible [Cryptosporidium parvum]
gi|46228987|gb|EAK89836.1| splicing factor U2AF U2 snRNP auxiliary factor large subunit; 3 RRM
domains [Cryptosporidium parvum Iowa II]
Length = 492
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 154/373 (41%), Gaps = 40/373 (10%)
Query: 25 TQQATRHARRVYVGGLPPLANEQAIAT--FFSQVMTAIGGNSAGP--GDAVVNVYINHEK 80
T ++ R VYVG LP Q I + +I NS G+ VV+ +IN +
Sbjct: 108 TSFTSKPLREVYVGNLP-----QGITVTELLEYINRSIIKNSVSHTNGNPVVSAWINSDG 162
Query: 81 KFAFVEMRTVEEASNAMALDGII-FEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K+AF E R++EEA+ + L+ ++ F+G +R+ + P ++ + QPS N L
Sbjct: 163 KYAFCECRSIEEANTLLRLNNLLSFKGNLLRIGK-----PKVSENIIGDQPSNNSTLINQ 217
Query: 140 GLASGAIGG---------AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
S +I + + + + G+ F IKE+L S + +L+ R+
Sbjct: 218 ITQSTSIISPYFNNIPLVLKKKETILITGINKKFVLEDIKEML-SIKNIEILELIDYRN- 275
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQH 250
Y + + TDI +N L K L ++ + + L+ +
Sbjct: 276 ----KYKIAICEGDLNTDITDKVVNKLGTEIKILRMKNCNSKVIHAVNNHLKNLSCIVRE 331
Query: 251 IAIQKMALQTSGMNTLGGGMS---LFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
K+ L+T + L + + + L+ +T + L Y I E++ E
Sbjct: 332 --SNKLLLKTEKFENIQSKNVISLLLPQKPCRCILLSNILTVEELLIPSTYSSIHEEIHE 389
Query: 308 ECGKYGTLVNVVIPRPD-----QNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNT 362
+C KYG + IP P+ ++ P G+ F+ +Y+ AK L +F G
Sbjct: 390 KCLKYGEIYKTTIPIPERALSNKDQFNDPYFGRAFIFFYNVESAIKAKLDLFKMRFLGRN 449
Query: 363 VNAFYYPEDKYFN 375
+ YY E ++ +
Sbjct: 450 MKISYYCEHEFLH 462
>gi|326924922|ref|XP_003208671.1| PREDICTED: serine/threonine-protein kinase Kist-like [Meleagris
gallopavo]
Length = 550
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L ++ +L +EEYE+ILED+REEC KYG +V+++IP+ E PG G+VF+E
Sbjct: 453 VLRLLNVLSDASLQSEEEYEDILEDIREECQKYGPVVSLLIPK------ENPGKGQVFVE 506
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+G+ F G V A +YP Y
Sbjct: 507 YANAGDSKAAQKMLTGKIFDGKFVVATFYPLSAY 540
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 143/374 (38%), Gaps = 60/374 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS S G V + N ++F A+VE
Sbjct: 167 RDARTVFCMQLSQRIRARDLEEFFS---------SVGKVQDVRLITCNKTRRFKGIAYVE 217
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+ E + A+ L G GV + V+ T A G PNL
Sbjct: 218 FKDPESVTLALGLSGQKLLGVPIVVQH------TQAEKNRMGNSMPNL----------MP 261
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF +++
Sbjct: 262 KGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 321
Query: 207 TDIACAALNGLKMGDKTLTV----RRATASSGQSKTEQESILAQAQQHIAIQKM------ 256
A LNG ++ + + V R G S + + + A ++
Sbjct: 322 AKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTDELDRSGIDLGATGRLQLMFKL 381
Query: 257 --------------ALQTSGMNTLGGGMSLFGETLA-KVLCLTEAITADALADDEEYEEI 301
AL + + T +A + L+ + +EI
Sbjct: 382 AEGTGLEIPPAAANALNMAPVMTQPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEI 441
Query: 302 LEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
+D+ EEC K+G +++V + DQ + G V+++ A N+L GR F G
Sbjct: 442 RDDVIEECNKHGGVLHVYV---DQASPQ----GNVYVKCPSIATAVAAVNSLHGRWFAGR 494
Query: 362 TVNAFYYPEDKYFN 375
+ A Y P Y +
Sbjct: 495 VITAAYVPVVNYHS 508
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 155/404 (38%), Gaps = 79/404 (19%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 119 PIDNLTPEE-RDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 171
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 172 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 214
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 215 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 274
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KTEQ 240
+ D A LNG ++ + + V R ASS S T +
Sbjct: 275 TFSDSECAKKALEQLNGFELTGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGR 334
Query: 241 ESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE-------- 285
++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 335 LQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAA 394
Query: 286 -----AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 395 SVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ-- 449
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
G V+++ A NAL GR F G + A Y P Y N
Sbjct: 450 --GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 491
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 142/372 (38%), Gaps = 60/372 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS S G V + N ++F A+VE
Sbjct: 8 RDARTVFCMQLSQRIRARDLEEFFS---------SVGKVQDVRLITCNKTRRFKGIAYVE 58
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+ E + A+ L G GV + V+ T A G PNL
Sbjct: 59 FKDPESVTLALGLSGQKLLGVPIVVQH------TQAEKNRMGNSMPNL----------MP 102
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF +++
Sbjct: 103 KGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 162
Query: 207 TDIACAALNGLKMGDKTLTV----RRATASSGQSKTEQESILAQAQQHIAIQKM------ 256
A LNG ++ + + V R G S + + + A ++
Sbjct: 163 AKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTDELDRSGIDLGATGRLQLMFKL 222
Query: 257 --------------ALQTSGMNTLGGGMSLFGETLA-KVLCLTEAITADALADDEEYEEI 301
AL + + T +A + L+ + +EI
Sbjct: 223 AEGTGLEIPPAAANALNMAPVMTAPQPPPQAAPPIATQCFMLSNMFDPQNETNPNWAKEI 282
Query: 302 LEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
+D+ EEC K+G +++V + DQ + G V+++ A N+L GR F G
Sbjct: 283 RDDVIEECNKHGGVLHVYV---DQASPQ----GNVYVKCPSIATAVAAVNSLHGRWFAGR 335
Query: 362 TVNAFYYPEDKY 373
+ A Y P Y
Sbjct: 336 VITAAYVPVVNY 347
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 116/281 (41%), Gaps = 50/281 (17%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 234 AAAMANNLQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYG 293
Query: 198 FCVYQDPAVTDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQE--------- 241
F + D A LNG +K+G T +TASS E E
Sbjct: 294 FITFSDTECAKKALDQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTT 353
Query: 242 ---SILAQAQQHIAIQ-----KMALQTS------------------GMNTLGGGMSLFGE 275
++A+ + +Q + ALQ S + M+L +
Sbjct: 354 GRLQLMARLAEGTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPAMNMNMNTAMNLPSQ 413
Query: 276 TLAKVLCLTEAITADALADDEEYE-EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
LA + D+ +++ +I D+ EEC K+G +V++ + D+N E G
Sbjct: 414 PLATHCFQLSNMFNPQSEDNPDWDVDIQHDVIEECNKHGGVVHIYV---DKNSTE----G 466
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
V+++ A NAL GR F G + A Y P Y N
Sbjct: 467 NVYVKCPSIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHN 507
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 144/356 (40%), Gaps = 48/356 (13%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
+ R R V+V L + FFSQ + + K +VE
Sbjct: 118 EEDRDRRTVFVTQLAARLTTREFDAFFSQ------AGRVREAKIITDRNSRKSKGCGYVE 171
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
NA+AL G G+ V V+ L+ A N A+ A+
Sbjct: 172 FYDETSVQNALALSGQKLLGIPVLVQ--------LSEA--------EKNRLAMAAQRNAM 215
Query: 147 GGAEGP--DRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDP 204
G P R+++G L + TE ++++ E FG L +L KD +TG SKG+GF Y++
Sbjct: 216 GVTTEPLYQRLYIGSLHFSLTENDVRQIFEPFGPLDFVNLHKDPETGRSKGFGFIQYKNA 275
Query: 205 AVTDIACAALNGLKMGDKTLTVRRATASSGQSKT-------EQESI----LAQAQQHIAI 253
A +NG ++ + L V + SG + + E E + L++A+ +
Sbjct: 276 NDAKQALEKMNGFELAGRNLKVGLVSEKSGTTMSTFGLDDEETEGLALNSLSRAELMAKL 335
Query: 254 QKMALQTSGMNTLGGGMSL---FGETLAKVLCLTEAITADALADDEEYEEILEDMREECG 310
Q S + L + + L + D + ++ D++ EC
Sbjct: 336 AARDPQNSPPSRHAPAPVLKPNIPTASTRYVMLNNMFNPNEETDPDWVSDLEADIKIECE 395
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCA-TAKNALSGRKFGGNTVNA 365
KYG + ++ + + +G+VFL++ D VG A A +AL+GR FGG + A
Sbjct: 396 KYGRVEHIKV--------NSDSMGEVFLKF-DRVGSAEKAISALNGRWFGGKQITA 442
>gi|219112083|ref|XP_002177793.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410678|gb|EEC50607.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 109
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 275 ETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVG 334
+ +++V+ L ++ + L D++ Y+E+LED REEC ++G L++VVIP+ GET G G
Sbjct: 10 QVVSRVVELQNMLSDEDLVDEQAYQEVLEDTREECSQFGKLISVVIPKK----GET-GEG 64
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
K+FLEY A A AL GR F G V A E K+ DY+
Sbjct: 65 KIFLEYETTNDAAQAIQALEGRTFDGRRVQATSCAEAKFVAMDYA 109
>gi|67593828|ref|XP_665753.1| splicing factor [Cryptosporidium hominis TU502]
gi|54656571|gb|EAL35522.1| splicing factor [Cryptosporidium hominis]
Length = 491
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 154/371 (41%), Gaps = 36/371 (9%)
Query: 25 TQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP--GDAVVNVYINHEKKF 82
T A++ R VYVG LP +A + +I NS G+ VV+ +IN + K+
Sbjct: 107 TSFASKPLREVYVGNLPQGI---TVAELLEYINRSIIKNSVSHTHGNPVVSAWINSDGKY 163
Query: 83 AFVEMRTVEEASNAMALDGII-FEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
AF E R++EEA+ + L+ ++ F+G +R+ + P ++ + QPS N L
Sbjct: 164 AFCECRSIEEANALLRLNNLLSFKGNLLRIGK-----PKVSENIIGDQPSNNSTLINQIS 218
Query: 142 ASGAIGG---------AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
S AI + + + + G+ F IKE+ S + +L+ R+
Sbjct: 219 QSTAIISPYFNNIPLVLKKKETILITGINKKFVLEDIKEMF-SIKNIEILELIDYRN--- 274
Query: 193 SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIA 252
Y + + TDI +N K+G + +R + +S + +
Sbjct: 275 --KYKIAICEGDLNTDITDKVVN--KLGTEIKILRMKSCNSKVIHAVNNHLKNMSCIVRE 330
Query: 253 IQKMALQTSGMNTLGGGMS---LFGETLAKVLCLTEAITADALADDEEYEEILEDMREEC 309
K+ L+ N + L + + + L+ + + L Y I +++ E+C
Sbjct: 331 SNKLLLKREKFNNIQNKNVISLLLPQKPCRCILLSNILAVEELLIPSTYSSIHKEIHEKC 390
Query: 310 GKYGTLVNVVIPRPD-----QNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVN 364
KYG + IP P+ ++ P G+ F+ +Y+ AK L +F G +
Sbjct: 391 LKYGEIYKTTIPIPERALSSKDQFNDPYFGRAFIFFYNVESAIKAKLDLFRMRFLGRNIK 450
Query: 365 AFYYPEDKYFN 375
YY E ++ N
Sbjct: 451 ISYYCEHEFLN 461
>gi|323456301|gb|EGB12168.1| hypothetical protein AURANDRAFT_8852, partial [Aureococcus
anophagefferens]
Length = 98
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGE-TPGVGKV 336
+KVL L +T L DDE Y ++++D+ +ECG YG + NV IPRP+ PG G V
Sbjct: 2 SKVLQLRHMVTDADLIDDEAYADVVDDVLQECGSYGDVENVEIPRPEPGTTRPAPGQGSV 61
Query: 337 FLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
F+ + DA A+ A GR F G T+ A YYP+D +
Sbjct: 62 FVAFGDAFFAQAAREAFEGRAFDGKTIIAGYYPQDLF 98
>gi|363736469|ref|XP_422213.3| PREDICTED: serine/threonine-protein kinase Kist [Gallus gallus]
Length = 388
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L ++ +L +EEYE+ILED+REEC KYG +V+++IP+ E PG G+VF+E
Sbjct: 291 VLRLLNVLSDASLQSEEEYEDILEDIREECQKYGPVVSLLIPK------ENPGKGQVFVE 344
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+G+ F G V A +YP Y
Sbjct: 345 YANAGDSKAAQKMLTGKIFDGKFVVATFYPLSAY 378
>gi|449509171|ref|XP_002189260.2| PREDICTED: serine/threonine-protein kinase Kist [Taeniopygia
guttata]
Length = 593
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L ++ +L +EEYE+ILED+REEC KYG +V+++IP+ E PG G+VF+E
Sbjct: 496 VLRLLNVLSDASLQCEEEYEDILEDIREECQKYGPVVSLLIPK------ENPGKGQVFVE 549
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+G+ F G V A +YP Y
Sbjct: 550 YANAGDSKAAQKMLTGKIFDGKFVVATFYPLSAY 583
>gi|159482188|ref|XP_001699155.1| hypothetical protein CHLREDRAFT_106436 [Chlamydomonas reinhardtii]
gi|158273218|gb|EDO99010.1| predicted protein [Chlamydomonas reinhardtii]
Length = 80
Score = 79.3 bits (194), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
++FVGGLP ++E +KELL +GTL F+LV D+ TG SKGY FC Y + + D+
Sbjct: 2 KLFVGGLPCEWSEDMVKELLAPYGTLKSFNLVMDKSTGKSKGYAFCEYSEESSADLLIKN 61
Query: 214 LNGLKMGDKTLTVRRA 229
L+ ++G K LTV+RA
Sbjct: 62 LHMRRVGSKALTVKRA 77
>gi|413920209|gb|AFW60141.1| hypothetical protein ZEAMMB73_955987, partial [Zea mays]
Length = 72
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 45/66 (68%)
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
G LV V+IPRPD +G GVGKVFLEY D G A AK AL GRKFGGN V A Y EDK
Sbjct: 5 GNLVKVIIPRPDPSGQPVVGVGKVFLEYADIDGAAKAKTALHGRKFGGNPVVAVCYAEDK 64
Query: 373 YFNKDY 378
+ N +Y
Sbjct: 65 FANGEY 70
>gi|291397536|ref|XP_002715130.1| PREDICTED: kinase interacting stathmin [Oryctolagus cuniculus]
Length = 419
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L ++EEYE+I+ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 322 VLRLLNVLDDDYLENEEEYEDIVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 375
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 376 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 409
>gi|300121045|emb|CBK21427.2| unnamed protein product [Blastocystis hominis]
Length = 457
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 157/409 (38%), Gaps = 94/409 (22%)
Query: 9 GATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPG 68
GAT LGA + M+ +T + + G+P I + +M ++ + GPG
Sbjct: 70 GATGLGAAMMTIADSMSAMST-GVTSLAITGVPATITPDEICNSINILMKSLKL-TTGPG 127
Query: 69 DAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPG 128
+ V + + A EMR+ EA+N +ALDG+ + V RP +Y GP
Sbjct: 128 NPCSGVGMEANGQTAIAEMRSPLEATNGLALDGLTVFNHVMHVNRPDNYT-------GPD 180
Query: 129 QPSPNLN-------------------LAAVG-----------------------LASGAI 146
P P L+ + VG L G
Sbjct: 181 TPPPKLDPNLLLQICTGSYAEKEYEEIVRVGRKLLETYKEPDPENDADKPTISSLKDGEK 240
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV--YQDP 204
G + V + +P E +I E FG L ++KD+ N + G V Y+D
Sbjct: 241 TGYDIEKCVLMHNIPRELEEAEIHTFCEPFGGLKKIYMLKDK---NCRFLGDAVAEYRDT 297
Query: 205 AVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG-- 262
+IA L L + + + I ++K + G
Sbjct: 298 LNYEIAMEGLQDLPIFNDIV--------------------------IKVEKPDPKWPGFP 331
Query: 263 --MNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVI 320
+NT+ + VL ++ I+ + L +DE+YE +LED+RE C K GT++N+ +
Sbjct: 332 QRVNTISNP--------SPVLRMSNIISLEDLEEDEDYEALLEDLREGCEKLGTVLNMHV 383
Query: 321 PRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
PR E PG+G F++Y + A A L F G V YYP
Sbjct: 384 PRIHSGEKEIPGLGFAFVQYSSVIEAAQAAKQLRLLTFNGKQVQVDYYP 432
>gi|391336770|ref|XP_003742751.1| PREDICTED: RNA-binding protein 39-like [Metaseiulus occidentalis]
Length = 520
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 133/326 (40%), Gaps = 57/326 (17%)
Query: 71 VVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP 130
+V+ K A+VE +E AM L+G GV + V+ P Q
Sbjct: 207 IVDNKTRKSKGIAYVEFFDLESVPLAMGLNGQKLFGVPIIVQ--------------PTQA 252
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
N A+ +GP R++VG L + +E +KE+ E FG L +L+K+ DT
Sbjct: 253 ERNRQ------ANQTAASTKGPMRLYVGSLHFDISEQMLKEIFEPFGRLDRVELIKE-DT 305
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQSKTEQE----- 241
G SKGYGF + + A LNG ++ + + V R S S + E
Sbjct: 306 GKSKGYGFVTFHEADAAKKAMEQLNGFELAGRPMKVGNVTERGMDGSAPSILDNEELDRT 365
Query: 242 ----------SILAQAQQHIAIQ-----KMALQT-SGMNTLGGGMSLFGETLA-KVLCLT 284
+++A+ + IQ K ALQ + G + E++A + L+
Sbjct: 366 GIELGAHGRLALMAKLAEGTGIQLPDAAKTALQQMQSAPSFGQTNNAQQESIATQCFLLS 425
Query: 285 EAITADALADDEEYE-EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDA 343
A +++++ E+ ED+ +EC K+G V+ + + N V+++
Sbjct: 426 NMFDAAEAHQEKDWDLELREDVLQECRKHGGAVHCFVDKEAAN---------VYVKCPSI 476
Query: 344 VGCATAKNALSGRKFGGNTVNAFYYP 369
A L GR F G + A Y P
Sbjct: 477 ATAVAAVGVLHGRFFAGRVITAAYVP 502
>gi|334349754|ref|XP_001379564.2| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Monodelphis
domestica]
Length = 348
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 82/189 (43%), Gaps = 45/189 (23%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
PV V+ Q TR ARR+YVG +P E +A +++ A+ G A
Sbjct: 136 PVPVVGSQMTRQARRLYVGNIPFGITEGQVAISAARLPAALPGPPA-------------- 181
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
+ + + G +A +++ P + P
Sbjct: 182 ----------CRPRAGNLGVGGAGPRPLAAQLKWPFAFPP-------------------A 212
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
G+ S + + ++F+GGLP Y + Q+KELL SFG L F+LVKD TG SKGY FC
Sbjct: 213 GVVSTVV--PDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC 270
Query: 200 VYQDPAVTD 208
Y D VTD
Sbjct: 271 EYVDINVTD 279
>gi|125584846|gb|EAZ25510.1| hypothetical protein OsJ_09334 [Oryza sativa Japonica Group]
Length = 942
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 121/290 (41%), Gaps = 63/290 (21%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQ-VMTAIGGNSAGPGDAVVNVYINHEKK 81
V QATR RR+++ LP LA E + ++ ++++ + ++ IN +K+
Sbjct: 464 VQLTQATRPLRRLHIENLPSLATEDMLIGCLNEFLLSSSASHIQRSKQPCLSCVINKDKR 523
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGL 141
AFVE T E+A+ A++ DG F G ++++RRP +Y A + P +PS + L + +
Sbjct: 524 QAFVEFLTPEDATAALSFDGRSFGGSSLKIRRPKEY--VEMAHVAPKKPSEEIKLISDVV 581
Query: 142 ASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVY 201
A+ P ++F+ G+ + +Y
Sbjct: 582 -------ADSPHKIFIAGISGVISSE--------------------------------MY 602
Query: 202 QDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTS 261
D +T ACA LNG+K+G LT +S TEQ +A I A
Sbjct: 603 IDHPITSKACAGLNGMKLGGGILTAVNVFPNS----TEQ--AFNEASPFYGIPDSA---- 652
Query: 262 GMNTLGGGMSLFGETLAKVLCLTEAITADA--LADDEEYEEILEDMREEC 309
SL E KVL L + L E EEILED+R EC
Sbjct: 653 --------KSLL-EEPTKVLQLKNVFDQEEYLLLSKSELEEILEDVRVEC 693
>gi|449268165|gb|EMC79035.1| Serine/threonine-protein kinase Kist, partial [Columba livia]
Length = 331
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L ++ +L +EEYE+ILED+REEC KYG +V+++IP+ E PG G+VF+E
Sbjct: 234 VLRLLNVLSDASLQCEEEYEDILEDIREECQKYGPVVSLLIPK------ENPGKGQVFVE 287
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+G+ F G V A +YP Y
Sbjct: 288 YANAGDSKAAQKMLTGKIFDGKFVVATFYPLSAY 321
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 152/389 (39%), Gaps = 64/389 (16%)
Query: 19 MPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINH 78
+P M R AR V+ L + + FFS V G V + N
Sbjct: 126 VPPASMLTPEERDARTVFCMQLSKTIRARDLEEFFSSV---------GKVRDVRMITCNK 176
Query: 79 EKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLN 135
++F A++E + E AM L+G GV + V+ PT A N
Sbjct: 177 TRRFKGIAYIEFKDPESVPLAMGLNGQKLLGVPIVVQ------PTQAEK----------N 220
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
A + + GP +++VG L Y TE ++ + E FG + L+ D +TG SKG
Sbjct: 221 RMANSMPNMVQRTHYGPMKLYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKG 280
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATAS-SGQSKTEQE-SILAQAQQHIA- 252
YGF Y++ A LNG ++ + + V T + S KT E L +A +
Sbjct: 281 YGFLTYRNAEDAKKALEHLNGFEIAGRPMKVGHVTENHSVYDKTAFEVDELDRAGYDLGA 340
Query: 253 ---IQKM-----------------ALQT-SGMNTLGGGMSLFGETLAKVLCLTEAITADA 291
+Q M ALQ SG+ ++ C A D
Sbjct: 341 TGRLQLMYKLAEGTGFPIPQAAANALQVASGVQAAPAAPTVQVTPPIATQCFLLANMFDP 400
Query: 292 LADDEE----YE-EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGC 346
+D + +E EI +D+ EEC K+G +++V + + G V+++
Sbjct: 401 NKEDVDSNTTWETEIRDDVIEECNKHGGVLHVYVDKASPQGN-------VYVKCTTIETA 453
Query: 347 ATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
+ AL GR FGG + A Y P Y N
Sbjct: 454 LASVAALHGRWFGGRVITAAYVPVTNYHN 482
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 147/386 (38%), Gaps = 60/386 (15%)
Query: 14 GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN 73
GA P ++ ++ R AR V+ L + + FFS V G V
Sbjct: 234 GAERTTPTELSPEE--RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRL 282
Query: 74 VYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP 130
+ N K+F A++E E + A+ L G GV + V+ L A QP
Sbjct: 283 ITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQP 342
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+ GP R++VG L + TE ++ + E FG + L+ D +T
Sbjct: 343 KSHT----------------GPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTET 386
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESI 243
G SKGYGF Y + A LNG +K+G+ T + T S + ++ I
Sbjct: 387 GRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTERLDMNTTSLDTDEMDRTGI 446
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD--------- 294
A + + + +G+ + T + L + A ++A
Sbjct: 447 DLGATGRLQLMFKLAEGAGLAVPQAAANALLATAPQPAPLQQQEVAPSIATQCFILSNMF 506
Query: 295 DEEYE-------EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCA 347
D E EI +D+ EEC K+G ++++ + G V+++
Sbjct: 507 DPRTETNPTWDVEIRDDVLEECAKHGGVLHIHV-------DTISHTGTVYVKCPSTTTAV 559
Query: 348 TAKNALSGRKFGGNTVNAFYYPEDKY 373
A NAL GR F G + A Y P Y
Sbjct: 560 LAVNALHGRWFAGRVITAAYLPVINY 585
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 147/386 (38%), Gaps = 60/386 (15%)
Query: 14 GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN 73
GA P ++ ++ R AR V+ L + + FFS V G V
Sbjct: 222 GAERTTPTELSPEE--RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRL 270
Query: 74 VYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP 130
+ N K+F A++E E + A+ L G GV + V+ L A QP
Sbjct: 271 ITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQP 330
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+ GP R++VG L + TE ++ + E FG + L+ D +T
Sbjct: 331 KSHT----------------GPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTET 374
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESI 243
G SKGYGF Y + A LNG +K+G+ T + T S + ++ I
Sbjct: 375 GRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTERLDMNTTSLDTDEMDRTGI 434
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD--------- 294
A + + + +G+ + T + L + A ++A
Sbjct: 435 DLGATGRLQLMFKLAEGAGLAVPQAAANALLATAPQPAPLQQQEVAPSIATQCFILSNMF 494
Query: 295 DEEYE-------EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCA 347
D E EI +D+ EEC K+G ++++ + G V+++
Sbjct: 495 DPRTETNPTWDVEIRDDVLEECAKHGGVLHIHV-------DTISHTGTVYVKCPSTTTAV 547
Query: 348 TAKNALSGRKFGGNTVNAFYYPEDKY 373
A NAL GR F G + A Y P Y
Sbjct: 548 LAVNALHGRWFAGRVITAAYLPVINY 573
>gi|302838915|ref|XP_002951015.1| hypothetical protein VOLCADRAFT_48801 [Volvox carteri f.
nagariensis]
gi|300263710|gb|EFJ47909.1| hypothetical protein VOLCADRAFT_48801 [Volvox carteri f.
nagariensis]
Length = 82
Score = 77.4 bits (189), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
++FVGGLP + E +KELL FGTL F+LV D+ TG SKGY FC Y + + ++
Sbjct: 2 KLFVGGLPCEWGEDMVKELLIPFGTLKSFNLVMDKSTGKSKGYAFCEYVEDSSAEVLIKN 61
Query: 214 LNGLKMGDKTLTVRRATASS 233
L+ ++G K LTV+RA S
Sbjct: 62 LHMRRIGSKALTVKRAMEGS 81
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 34 RVYVGGLPPLANEQAIATFFSQ--VMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
++YVG LP + + +A F + V+ + + + + + FAFV M TVE
Sbjct: 160 KLYVGNLPFDIDSEGLAKMFDESGVVEMV--------EVIYDRSSGRSRGFAFVTMSTVE 211
Query: 92 EASNAMA-LDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAE 150
EA A+ +G +G ++RV P P L P + N G +
Sbjct: 212 EAEAAIKKFNGFEIDGRSLRVNFPE--VPRLQNGRSPARSPSNFG-----------GFVD 258
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
P +V+VG L + T ++E L G + G +++DR+TG S+G+GF + A + A
Sbjct: 259 SPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSSEAEVEAA 318
Query: 211 CAALNGLKMGDKTLTVRRATASS--GQS 236
+ ++GL++ +++ V A + S GQS
Sbjct: 319 VSEMDGLEVEGRSIRVNVAKSRSTEGQS 346
>gi|432107103|gb|ELK32526.1| Splicing factor U2AF 65 kDa subunit [Myotis davidii]
Length = 243
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
++F+GGLP Y + Q+KELL FG L F+LVKD TG SKG F Y D ++ D A A
Sbjct: 128 KLFMGGLPNYMKDDQVKELLTWFGPLKAFNLVKDSTTGLSKGCAFYEYVDISIRDQAMAG 187
Query: 214 LNGLKMGDKTLTVRRA 229
NG+++G K L V+RA
Sbjct: 188 PNGMQLGVKKLLVQRA 203
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 146/382 (38%), Gaps = 60/382 (15%)
Query: 14 GAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVN 73
GA P ++ ++ R AR V+ L + + FFS V G V
Sbjct: 220 GADRTTPTELSPEE--RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRL 268
Query: 74 VYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP 130
+ N K+F A++E E + A+ L G GV + V+ L A QP
Sbjct: 269 ITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQP 328
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+ GP R++VG L + TE ++ + E FG + L+ D +T
Sbjct: 329 KSHT----------------GPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTET 372
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESI 243
G SKGYGF Y + A LNG +K+G+ T + T S + ++ I
Sbjct: 373 GRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTERLDMNTTSLDTDEMDRTGI 432
Query: 244 LAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD--------- 294
A + + + +G+ + T + L + A ++A
Sbjct: 433 DLGATGRLQLMFKLAEGAGLAVPQAAANALLATAPQPAPLQQQEVAPSIATQCFILSNMF 492
Query: 295 DEEYE-------EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCA 347
D E EI +D+ EEC K+G ++++ + G V+++
Sbjct: 493 DPRTETNPTWDVEIRDDVLEECAKHGGVLHIHV-------DTISHTGTVYVKCPSTTTAV 545
Query: 348 TAKNALSGRKFGGNTVNAFYYP 369
A NAL GR F G + A Y P
Sbjct: 546 LAVNALHGRWFAGRVITAAYVP 567
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 53/319 (16%)
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE + A++ G G+ + ++ PT+A LAA
Sbjct: 195 KGIAYVEFQEESSVFTALSFSGQKVHGIPIMIQ------PTMAE---------KNRLAA- 238
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
A+ + AEGP +++VG L Y TE ++ + FG + +++D T S+GY F
Sbjct: 239 --AAENLKKAEGPKKLYVGSLHYNITEDMLQGIFSPFGNVERVSIMRDTATNVSRGYAFV 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQES-------ILAQAQQHIA 252
++D + A A LNG ++ + + V T + + + Q +A
Sbjct: 297 EFRDSDSAERAMANLNGFELAGRPMKVNYGTVDTSLVNIDSLDGEDMDVGVGMTPQSRVA 356
Query: 253 IQKMALQTSGMNTLGGGMSLFGETLAK--------VLCLTEA--ITADALADDEEY---- 298
+ M +G N MS+ G + C+T + + +E
Sbjct: 357 L--MHKLAAGHN---ADMSIPGVQVPPPPFAVPTMPTCITSCCFVIGNMFDPSKETGSDW 411
Query: 299 -EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRK 357
+EI ED+ EEC K+G + ++ + + Q GKV+++ + A + +GR+
Sbjct: 412 DKEIREDVLEECVKFGNIFHIHVDKFSQ--------GKVYIKSQTPQTASAAVGSFNGRR 463
Query: 358 FGGNTVNAFYYPEDKYFNK 376
+ GN ++A PE+ Y K
Sbjct: 464 YAGNVIHAELVPENTYHLK 482
>gi|340506971|gb|EGR33003.1| u2 small nuclear ribonucleoprotein auxiliary factor 2, putative
[Ichthyophthirius multifiliis]
Length = 302
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP---DQNGGE--TPG 332
+VL L I L DEEY++I ED+++EC K+G +V++ IPRP D G+ G
Sbjct: 192 TQVLVLKNMINDGELIIDEEYKQIEEDVKDECSKHGKVVSIAIPRPSVDDVKAGKEHVLG 251
Query: 333 VGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
GK+++EY A+ L+GR F TV Y+ KY +DY
Sbjct: 252 KGKIYVEYESIEAAREARRYLNGRLFSNRTVQVSYFNYQKYLEQDY 297
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 34 RVYVGGLPPLANEQAIATFFSQ-----VMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
++YVG LP + + +A F + ++ I S+G + FAFV M
Sbjct: 168 KLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRSSG-----------RSRGFAFVTMS 216
Query: 89 TVEEASNAMA-LDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIG 147
TVEEA A+ +G +G ++RV P P L P + N G
Sbjct: 217 TVEEAEAAIKKFNGFEIDGRSLRVNFPE--VPRLQNGRSPARSPSNFG-----------G 263
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
+ P +V+VG L + T ++E L G + G +++DR+TG S+G+GF + A
Sbjct: 264 FVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSSEAEV 323
Query: 208 DIACAALNGLKMGDKTLTVRRATASS--GQS 236
+ A + ++GL++ +++ V A + S GQS
Sbjct: 324 EAAVSEMDGLEVEGRSIRVNVAKSRSTEGQS 354
>gi|344250069|gb|EGW06173.1| Serine/threonine-protein kinase Kist [Cricetulus griseus]
Length = 375
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 278 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 331
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 332 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 365
>gi|12850652|dbj|BAB28802.1| unnamed protein product [Mus musculus]
Length = 419
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 375
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 376 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 409
>gi|354487456|ref|XP_003505889.1| PREDICTED: serine/threonine-protein kinase Kist-like [Cricetulus
griseus]
Length = 461
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 364 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 417
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 418 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 451
>gi|8393668|ref|NP_058989.1| serine/threonine-protein kinase Kist [Rattus norvegicus]
gi|24211854|sp|Q63285.1|UHMK1_RAT RecName: Full=Serine/threonine-protein kinase Kist; AltName:
Full=Kinase interacting with stathmin; AltName: Full=PAM
COOH-terminal interactor protein 2; Short=P-CIP2;
AltName: Full=U2AF homology motif kinase 1
gi|1403532|emb|CAA67021.1| KIS [Rattus norvegicus]
gi|5821768|gb|AAC53031.2| PAM COOH-terminal interactor protein 2 [Rattus norvegicus]
gi|149058100|gb|EDM09257.1| rCG46339, isoform CRA_b [Rattus norvegicus]
Length = 419
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 375
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 376 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 409
>gi|40254330|ref|NP_034763.3| serine/threonine-protein kinase Kist [Mus musculus]
gi|57015387|sp|P97343.3|UHMK1_MOUSE RecName: Full=Serine/threonine-protein kinase Kist; AltName:
Full=Kinase interacting with stathmin; AltName: Full=PAM
COOH-terminal interactor protein 2; Short=P-CIP2;
AltName: Full=U2AF homology motif kinase 1
gi|27501712|gb|AAO13515.1| KIS kinase [Mus musculus]
gi|37194893|gb|AAH58732.1| U2AF homology motif (UHM) kinase 1 [Mus musculus]
Length = 419
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 375
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 376 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 409
>gi|21726713|emb|CAA71714.2| KIS protein kinase [Mus musculus]
gi|117616788|gb|ABK42412.1| Kist [synthetic construct]
Length = 414
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 375
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 376 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 409
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 139/366 (37%), Gaps = 58/366 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 230 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 280
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
E + A+ L G GV + V+ L A QP +
Sbjct: 281 FEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHT------------ 328
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF Y +
Sbjct: 329 ----GPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADD 384
Query: 207 TDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
A LNG +K+G+ T + T S + ++ I A + + +
Sbjct: 385 AKKALEQLNGFELAGRLMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAE 444
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD---------DEEYE-------EILE 303
+G+ + T + L + A ++A D E EI +
Sbjct: 445 GAGLAVPQAAANALLATAPQPAPLQQQEAAPSIATQCFILSNMFDPRTETNPTWDVEIKD 504
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
D+ EEC K+G ++++ + G V+++ A NAL GR F G +
Sbjct: 505 DVLEECAKHGGVLHIHV-------DTISPTGTVYVKCPSTTTAVLAVNALHGRWFAGRVI 557
Query: 364 NAFYYP 369
A Y P
Sbjct: 558 TAAYVP 563
>gi|148707213|gb|EDL39160.1| U2AF homology motif (UHM) kinase 1 [Mus musculus]
Length = 232
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 135 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 188
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 189 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 222
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 137/366 (37%), Gaps = 58/366 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 252 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRMITCNKTKRFKGIAYIE 302
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
E S A+ L G GV + V+ L A QP +
Sbjct: 303 FEDPESVSLALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHT------------ 350
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF Y +
Sbjct: 351 ----GPMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADD 406
Query: 207 TDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
A LNG +K+G+ T + T S + ++ I A + + +
Sbjct: 407 AKKALEQLNGFELAGRPMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAE 466
Query: 260 TSGM---------------NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE-EILE 303
+G+ ++A + + A + ++ EI +
Sbjct: 467 GAGLAVPQAAANALLATAPQPAPVQQQQQTPSIATQCFILSNMFDPATETNTTWDSEIRD 526
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
D+ EEC K+G ++++ + G V+++ A NAL GR F G +
Sbjct: 527 DVLEECAKHGGVLHIHV-------DTASSTGTVYVKCPSTTTAVLAVNALHGRWFAGRVI 579
Query: 364 NAFYYP 369
A Y P
Sbjct: 580 TAAYVP 585
>gi|293354575|ref|XP_574033.2| PREDICTED: serine/threonine-protein kinase Kist-like [Rattus
norvegicus]
Length = 419
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 375
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 376 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 409
>gi|149058099|gb|EDM09256.1| rCG46339, isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 154 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 207
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 208 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 241
>gi|26326137|dbj|BAC26812.1| unnamed protein product [Mus musculus]
Length = 330
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +++EYE+++ED++EEC KYG +V++++P+ E PG G+VF+E
Sbjct: 233 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK------ENPGRGQVFVE 286
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 287 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 320
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 156/411 (37%), Gaps = 88/411 (21%)
Query: 7 PFGA---TQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
PFG + LG PV+ ++ + R AR V+V L + + FFS
Sbjct: 136 PFGRRNRSPLGLRSNSPVEELSPEE-RDARTVFVMQLSQRIRARDLEEFFS--------- 185
Query: 64 SAGPGDAVVNVYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
S G V + N ++F A++E + E + A+ L G GV + V+ T
Sbjct: 186 SVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQH------T 239
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
A G PNL GP R++VG L + TE ++ + E FG +
Sbjct: 240 QAEKNRMGNSMPNL----------MPKNMTGPMRLYVGSLHFNITEDMLRSIFEPFGKID 289
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
L+ D +TG SKGYGF +++ A LNG ++ + + V T
Sbjct: 290 NIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFELAGRPMKVGNVT---------- 339
Query: 241 ESILAQAQQHIAIQKMALQTSGMN-------------TLGGGMSLFGETLAKVL------ 281
E + Q Q + L SG++ G GM + + A L
Sbjct: 340 ERLDLQQQGPSILDSDELDRSGIDLGATGRLQLMFKLAEGAGMQV-PQAAANALSIATGQ 398
Query: 282 -----------------CLTEAITADALADDEEYEEI--LEDMREECGKYGTLVNVVIPR 322
C + D + + ++ +D+ EEC K+G +++V +
Sbjct: 399 PVVPQVQTNSTPPIATQCFMLSNMFDPATESTQTWDVEIRDDVIEECNKHGGVLHVYV-- 456
Query: 323 PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
D+ + G V+++ + N+L GR F G + A Y P Y
Sbjct: 457 -DKGSPQ----GNVYVKCPSIATAVASVNSLHGRWFAGRVITAAYVPLLNY 502
>gi|390980893|pdb|3V4M|A Chain A, Crystal Structure Of A Rna Binding Domain Of A U2 Small
Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2af) From
Mus Musculus At 1.80 A Resolution
gi|390980894|pdb|3V4M|B Chain B, Crystal Structure Of A Rna Binding Domain Of A U2 Small
Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2af) From
Mus Musculus At 1.80 A Resolution
Length = 105
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFL 338
+VLCL + + L DDEEYEEI+ED+R+EC KYG + ++ IPRP +G E PG GK+F+
Sbjct: 6 EVLCLXNXVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFV 64
Query: 339 EYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E+ C A L+GRKF V Y D Y +D+
Sbjct: 65 EFTSVFDCQKAXQGLTGRKFANRVVVTKYCDPDSYHRRDF 104
>gi|442570696|pdb|4FXW|A Chain A, Structure Of Phosphorylated Sf1 Complex With U2af65-uhm
Domain
gi|442570698|pdb|4FXW|C Chain C, Structure Of Phosphorylated Sf1 Complex With U2af65-uhm
Domain
Length = 106
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFL 338
+VLCL + + L DDEEYEEI+ED+R+EC KYG + ++ IPRP +G E PG GK+F+
Sbjct: 7 EVLCLXNXVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFV 65
Query: 339 EYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E+ C A L+GRKF V Y D Y +D+
Sbjct: 66 EFTSVFDCQKAXQGLTGRKFANRVVVTKYCDPDSYHRRDF 105
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 35/243 (14%)
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
L + + + +RV+VG +P+ TE QIK + S G + L + +TG GYGF
Sbjct: 730 LNNTPVKERDNDNRVYVGSVPWNATEDQIKTIFSSIGNVVSCSLKPNLETGRHMGYGFID 789
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQT 260
Y +P + A + NG + + L VR+ ++ + ++L QK+ L
Sbjct: 790 YDNPKSAEDAISTFNGYDINGRQLKVRKPVRNAPKVNNNDGNLLEDNISLNNEQKILL-- 847
Query: 261 SGMNTLGGGMSLFGETLAKVLCLTEAITADAL--------ADDEEYEEILEDMREECGKY 312
K+L +E T + A+ +EY E E+++ EC +
Sbjct: 848 ----------------TQKLLAASEPATNRCMVMRNLGSPAELDEYFE--EEIKNECSSF 889
Query: 313 GTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDK 372
G + VVI N G + K ++ + DA CA + +GR F G V A YY +
Sbjct: 890 GAVEKVVI----TNEGTS---VKAYVLFRDAPSCAMCLSKQNGRYFSGYLVKAEYYNVNL 942
Query: 373 YFN 375
+ N
Sbjct: 943 FLN 945
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 156/411 (37%), Gaps = 88/411 (21%)
Query: 7 PFGA---TQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
PFG + LG PV+ ++ + R AR V+V L + + FFS
Sbjct: 115 PFGRRNRSPLGLRSNSPVEELSPE-ERDARTVFVMQLSQRIRARDLEEFFS--------- 164
Query: 64 SAGPGDAVVNVYINHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
S G V + N ++F A++E + E + A+ L G GV + V+ T
Sbjct: 165 SVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQH------T 218
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLH 180
A G PNL GP R++VG L + TE ++ + E FG +
Sbjct: 219 QAEKNRMGNSMPNL----------MPKNMTGPMRLYVGSLHFNITEDMLRSIFEPFGKID 268
Query: 181 GFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQ 240
L+ D +TG SKGYGF +++ A LNG ++ + + V T
Sbjct: 269 NIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFELAGRPMKVGNVT---------- 318
Query: 241 ESILAQAQQHIAIQKMALQTSGMN-------------TLGGGMSLFGETLAKVL------ 281
E + Q Q + L SG++ G GM + + A L
Sbjct: 319 ERLDLQQQGPSILDSDELDRSGIDLGATGRLQLMFKLAEGAGMQV-PQAAANALSIATGQ 377
Query: 282 -----------------CLTEAITADALADDEEYEEI--LEDMREECGKYGTLVNVVIPR 322
C + D + + ++ +D+ EEC K+G +++V +
Sbjct: 378 PVVPQVQTNSTPPIATQCFMLSNMFDPATESTQTWDVEIRDDVIEECNKHGGVLHVYV-- 435
Query: 323 PDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
D+ + G V+++ + N+L GR F G + A Y P Y
Sbjct: 436 -DKGSPQ----GNVYVKCPSIATAVASVNSLHGRWFAGRVITAAYVPLLNY 481
>gi|159162769|pdb|1O0P|A Chain A, Solution Structure Of The Third Rna Recognition Motif
(Rrm) Of U2af65 In Complex With An N-Terminal Sf1
Peptide
Length = 104
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFL 338
+VLCL + + L DDEEYEEI+ED+R+EC KYG + ++ IPRP +G E PG GK+F+
Sbjct: 5 EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFV 63
Query: 339 EYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E+ C A L+GRKF V Y D Y +D+
Sbjct: 64 EFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 103
>gi|159162801|pdb|1OPI|A Chain A, Solution Structure Of The Third Rna Recognition Motif
(Rrm) Of U2af65 In Complex With An N-Terminal Sf1
Peptide
gi|444302011|pdb|2M0G|B Chain B, Structure, Phosphorylation And U2af65 Binding Of The
Nterminal Domain Of Splicing Factor 1 During 3 Splice
Site Recognition
Length = 104
Score = 76.3 bits (186), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFL 338
+VLCL + + L DDEEYEEI+ED+R+EC KYG + ++ IPRP +G E PG GK+F+
Sbjct: 5 EVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFV 63
Query: 339 EYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
E+ C A L+GRKF V Y D Y +D+
Sbjct: 64 EFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 103
>gi|300637966|gb|ADK26147.1| kinase-interacting stathmin [Oryctolagus cuniculus]
Length = 254
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L ++EEYE+I+ED++EEC KYG +V++++P+ E PG +VF+E
Sbjct: 165 VLRLLNVLDDDYLENEEEYEDIVEDVKEECQKYGPVVSLLVPK------ENPGRRQVFVE 218
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 219 YANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAY 252
>gi|301101828|ref|XP_002900002.1| Poly(U)-binding-splicing factor PUF60, putative [Phytophthora
infestans T30-4]
gi|262102577|gb|EEY60629.1| Poly(U)-binding-splicing factor PUF60, putative [Phytophthora
infestans T30-4]
Length = 444
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 155/369 (42%), Gaps = 64/369 (17%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGN-SAGPGDAVVNVYINHEKKFAFVEMRTV 90
ARR+Y+G L E+ I+ F+ T + S PG + K F F+E V
Sbjct: 117 ARRLYIGNLYYDLKEEDISNVFAPFGTIRSIDLSLEPG-------ASRSKGFCFLEYEDV 169
Query: 91 EEASNAM-ALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
A +A+ L+G A+RV RP N +L GQ AI
Sbjct: 170 LAAESAVQVLNGTPLANRAIRVGRPHRGNTNSNDSLSIGQE--------------AIKNV 215
Query: 150 EGPDR-VFVGGLPYYFTETQIKELLESFGTLHGFDL--VKDRDTGNSKGYGFCVYQDPAV 206
P + ++V + ++ + FG +H + V ++G+ +GYGF + + +
Sbjct: 216 --PTKCIYVANVRVELNSQHLESIFSPFGAIHSCVMTAVSPLESGH-RGYGFMRFVEESC 272
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTL 266
A +NG ++ + L V +A+ ++ LA +Q + TSG N +
Sbjct: 273 ALSAIQHMNGFELAGQALKVGKASEAAMLIN------LATSQDKVVRDGSGATTSGANVI 326
Query: 267 GG-GMSLFGE-----------TLAKV-LCLTEAITADALADDEEYEEILEDMREECGKYG 313
FGE T AK LCL + + D E+ +++R ECGK+G
Sbjct: 327 AAPEKKPFGEDDVEKVKDTTETDAKCCLCLVNLVNCGEVDD-----ELEDEVRGECGKFG 381
Query: 314 TLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP---- 369
++ V I E +VF+ + DA G A AK AL GR FGGN V A YYP
Sbjct: 382 SVNKVDI-------HELADHVRVFVLFDDAAGAAKAKQALHGRFFGGNQVQAHYYPLREL 434
Query: 370 EDKYFNKDY 378
E K + D+
Sbjct: 435 EQKRYTSDF 443
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 140/370 (37%), Gaps = 58/370 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 233 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 283
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
E + A+ L G GV + V+ L A QP +
Sbjct: 284 FEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHT------------ 331
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF Y +
Sbjct: 332 ----GPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADD 387
Query: 207 TDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
A LNG +K+G+ T + T S + ++ I A + + +
Sbjct: 388 AKKALEQLNGFELAGRLMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAE 447
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD---------DEEYE-------EILE 303
+G+ + T + + + A ++A D E EI +
Sbjct: 448 GAGLAVPQAAANALLATAPQPAPMQQQEAAPSIATQCFILSNMFDPRTETNPTWDVEIRD 507
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
D+ EEC K+G ++++ + G V+++ A NAL GR F G +
Sbjct: 508 DVLEECAKHGGVLHIHV-------DTISPTGTVYVKCPSTTTAVLAVNALHGRWFAGRVI 560
Query: 364 NAFYYPEDKY 373
A Y P Y
Sbjct: 561 TAAYVPVINY 570
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 139/366 (37%), Gaps = 58/366 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R R V+ L + + FFS V G V + N ++F A++E
Sbjct: 179 RDLRTVFCMQLSQRIRAKDLEEFFSSV---------GKVRDVRLITCNKTRRFKGIAYIE 229
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+ E A+ L G GV + V+ T A G PNL A
Sbjct: 230 FKDAESVPLALGLTGQKLLGVPIIVQH------TQAEKNRVGNTLPNL----------AP 273
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
+ GP R++VG L + TE ++ + E FG + L+ D DTG SKGYGF +
Sbjct: 274 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFLTFHHATD 333
Query: 207 TDIACAALNGLKMGDKTLTVRRAT--ASSGQSKTEQESILAQAQQHI-AIQKMAL----- 258
A LNG ++ + + V T A G S L +A + A ++ L
Sbjct: 334 AKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGVDLGATGRLQLMFKLA 393
Query: 259 QTSGMNTLGGGMSLF---GETL------------AKVLCLTEAITADALADDEEYEEILE 303
+ +G+ S+ G TL + L + ++ EI +
Sbjct: 394 EGTGLQIPPAAASVLMGAGSTLVAPQPQVAPPIATQCFMLNNMFDPSSESNPSWDIEIRD 453
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
D+ EC K+G +++V + + G V+ + + N+L GR F G +
Sbjct: 454 DVISECNKHGGVLHVYVDKASPQGN-------VYCKCPTIATAVASVNSLHGRWFAGRVI 506
Query: 364 NAFYYP 369
A Y P
Sbjct: 507 TAAYVP 512
>gi|357154605|ref|XP_003576839.1| PREDICTED: splicing factor U2af large subunit A-like [Brachypodium
distachyon]
Length = 177
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 279 KVLCLTEAITADA--LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKV 336
KV+CL + I+ADA L DDE YE++++++ +E K+G L++VVIPRP GVG+V
Sbjct: 66 KVVCLAQMISADAEDLRDDELYEDLVDEVEDEAWKFGHLMSVVIPRPGHAPAAAAGVGRV 125
Query: 337 FLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
FLEY D G K L R FGG + A +YP+DK+ DY
Sbjct: 126 FLEYADLEGSDRCKTKLHWRWFGGRRIVAAFYPKDKFAGGDYD 168
>gi|323451698|gb|EGB07574.1| hypothetical protein AURANDRAFT_64670 [Aureococcus anophagefferens]
Length = 214
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%)
Query: 22 QVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK 81
Q+ + ATR RR+YVG LP + + + F ++ + A G AG + VV+ +++ +KK
Sbjct: 43 QMPSNPATRKERRLYVGNLPQTFDSEQLRIFLNEALRACGAIPAGVDEVVVSSWVSPDKK 102
Query: 82 FAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDY 117
FAFVE+ TVE A+ ++ L GI G +++ P +Y
Sbjct: 103 FAFVELSTVEAATTSLGLSGITCMGCQLKICHPNNY 138
>gi|432103844|gb|ELK30681.1| Serine/threonine-protein kinase Kist [Myotis davidii]
Length = 435
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + D L +E YE+ +ED+REEC KYG +V++++P+ E+PG G+VF+E
Sbjct: 338 VLRLLNVLDGDYLESEEGYEDAVEDVREECQKYGPVVSLLVPK------ESPGRGQVFVE 391
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ L+GR F G V A +YP Y
Sbjct: 392 YANAGDSKAAQKLLTGRLFDGKFVVATFYPLSAY 425
>gi|388583572|gb|EIM23873.1| splicing factor, CC1-like protein [Wallemia sebi CBS 633.66]
Length = 459
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 149/375 (39%), Gaps = 39/375 (10%)
Query: 17 PLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI 76
P +P++ R V+V L N + FF +G S V++
Sbjct: 82 PEIPIEDNVDSLESEQRSVFVSQLSTRTNSSDLRRFF---QDRLGERSIVDARIVMDKNS 138
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
K +VE++T A+ L G + G+ + V + ++ + A + ++
Sbjct: 139 RRSKGIGYVEVKTASLIDKALELTGELLNGIPMIVTQ-SEADKNRQAKASSSLQTQSVQA 197
Query: 137 AAVGLA---------SGAIGGAEGPD--RVFVGGLPYYFTETQIKELLESFGTLHGFDLV 185
V + S I A P +V+VG L Y E ++ + E FG + +L
Sbjct: 198 EEVRRSTKSRDYDNRSSTINPANDPTLYKVYVGSLSYTLKEYDVRSVFEPFGEIEDVELS 257
Query: 186 KDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILA 245
D D SKGY + Y+ + +AC +N ++ +TL V+ + ++SI
Sbjct: 258 VD-DQNRSKGYAYVKYKRMEDSRMACEQMNRFELAGRTLKVQLVNYYGDPVRMPEQSIEN 316
Query: 246 QAQQHIAIQKMALQTSGMNTLGGGMSLFGETLA---KVLCLTEAITADAL------ADDE 296
+ ++ + L + M + + F + LA K + E + + E
Sbjct: 317 EGLNLNSVSRHELMKTLMRSHDPN-AQFEQELAAREKEKKVQERMKTKGVLLKYMFKASE 375
Query: 297 EYE-----EILEDMREEC-GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAK 350
E E E+ ED++ EC KYG + + + + + G++ +++Y A
Sbjct: 376 ETEAGWEKELAEDVKTECENKYGKVQEIGVDKESEE-------GEIVVKFYTIESAEDAI 428
Query: 351 NALSGRKFGGNTVNA 365
N L+GR FGG V A
Sbjct: 429 NGLNGRWFGGRQVKA 443
>gi|449458894|ref|XP_004147181.1| PREDICTED: uncharacterized protein LOC101213128 [Cucumis sativus]
Length = 910
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 120/303 (39%), Gaps = 74/303 (24%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V QATR RR+Y+ LP A+E+AI + + + G N ++ I+ ++
Sbjct: 453 VQLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISCIIHKDRGQ 512
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
A VE T E+AS A+ DG F G +++RRP DY TL
Sbjct: 513 ALVEFLTPEDASAALLFDGSDFSGSTLKIRRPKDYIETL--------------------- 551
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
++++ +FG L + + D F Y
Sbjct: 552 ---------------------------RDVVTAFGRLKAYHFEINDDLNGP--CAFLEYV 582
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
D +V ACA LNG+K+G + L V A +T + +H+ K LQ
Sbjct: 583 DESVVSKACAGLNGMKIGGQVLKVFPAVPFPLTERTGCQPCYG-IPEHV---KPLLQRPS 638
Query: 263 MNTLGGGMSLFGETLAKVLCLTEAITADALA--DDEEYEEILEDMREECGKYGTL--VNV 318
+ VL + AD L + + +E+LED+R EC ++GT+ VN
Sbjct: 639 V----------------VLKINNVFNADVLPVLSESDIDEVLEDIRFECARFGTVKSVNF 682
Query: 319 VIP 321
V P
Sbjct: 683 VKP 685
>gi|262348230|gb|ACY56333.1| putative splicing factor u2af large subunit, partial [Monascus
ruber]
Length = 90
Score = 75.1 bits (183), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCAT-AKNALSGRKF 358
EI++D+R+EC KYGT++ + IPRP G ++PGVGK++++ +D+V AT A AL+GRKF
Sbjct: 12 EIMDDVRDECSKYGTILELKIPRPTTGGRQSPGVGKIYVK-FDSVKSATEALKALAGRKF 70
Query: 359 GGNTVNAFYYPEDKY 373
TV Y+ E+ +
Sbjct: 71 SDRTVVTTYFSEENF 85
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 133/366 (36%), Gaps = 58/366 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 234 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLILCNKTKRFKGIAYIE 284
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
E + A+ L G GV + V+ L A QP +
Sbjct: 285 FEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHT------------ 332
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF Y +
Sbjct: 333 ----GPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADD 388
Query: 207 TDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
A LNG +K+G+ T + T+S + ++ I A + + +
Sbjct: 389 AKKALEQLNGFELAGRLMKVGNVTERLDMNTSSLDTDEMDRTGIDLGATGRLQLMFKLAE 448
Query: 260 TSGM----------------NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILE 303
+G+ + L+ + EI +
Sbjct: 449 GAGLAVPQAAANALLATAPQPAPVQQQQQAPSIATQCFILSNMFDPRTETNPTWDAEIRD 508
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
D+ EEC K+G ++++ + G V+++ A NAL GR F G +
Sbjct: 509 DVLEECAKHGGVLHIHV-------DTVSPTGTVYVKCPSTTTAVLAVNALHGRWFAGRVI 561
Query: 364 NAFYYP 369
A Y P
Sbjct: 562 TAAYVP 567
>gi|449498643|ref|XP_004160593.1| PREDICTED: uncharacterized LOC101213128 [Cucumis sativus]
Length = 918
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 120/303 (39%), Gaps = 74/303 (24%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V QATR RR+Y+ LP A+E+AI + + + G N ++ I+ ++
Sbjct: 461 VQLTQATRPMRRLYIENLPHSASEKAIIDCLNGFLMSSGVNHIEGTQPCISCIIHKDRGQ 520
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
A VE T E+AS A+ DG F G +++RRP DY TL
Sbjct: 521 ALVEFLTPEDASAALLFDGSDFSGSTLKIRRPKDYIETL--------------------- 559
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
++++ +FG L + + D F Y
Sbjct: 560 ---------------------------RDVVTAFGRLKAYHFEINDDLNGP--CAFLEYV 590
Query: 203 DPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
D +V ACA LNG+K+G + L V A +T + +H+ K LQ
Sbjct: 591 DESVVSKACAGLNGMKIGGQVLKVFPAVPFPLTERTGCQPCYG-IPEHV---KPLLQRPS 646
Query: 263 MNTLGGGMSLFGETLAKVLCLTEAITADALA--DDEEYEEILEDMREECGKYGTL--VNV 318
+ VL + AD L + + +E+LED+R EC ++GT+ VN
Sbjct: 647 V----------------VLKINNVFNADVLPVLSESDIDEVLEDIRFECARFGTVKSVNF 690
Query: 319 VIP 321
V P
Sbjct: 691 VKP 693
>gi|345496803|ref|XP_003427819.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Nasonia vitripennis]
Length = 425
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQSLL 106
>gi|156553552|ref|XP_001601896.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Nasonia vitripennis]
Length = 434
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQSLL 106
>gi|307108143|gb|EFN56384.1| expressed protein [Chlorella variabilis]
Length = 404
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q TR RR+YVGGLP + + TF +Q + A+G ++ + E+ FAF+E
Sbjct: 246 QMTRPMRRLYVGGLPQPCYDFMLTTFLNQALMALGICQVAGKAPIIACQVTPERNFAFIE 305
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGP 127
+A+ A+ LDGI F G ++++RP DY P A P
Sbjct: 306 FGDTSDATAALQLDGIPFRGNTLKIKRPKDYTPPFGAPPDP 346
>gi|350401751|ref|XP_003486249.1| PREDICTED: cleavage stimulation factor subunit 2-like [Bombus
impatiens]
Length = 441
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQSLL 106
>gi|193598819|ref|XP_001951232.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706164|ref|XP_003243012.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 386
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 14 VFVGNIPYEATEEKLKDIFSEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S++
Sbjct: 74 NGYEIGGRTLRV--DNACTEKSRLEMQSLM 101
>gi|307202383|gb|EFN81811.1| Cleavage stimulation factor 64 kDa subunit [Harpegnathos saltator]
Length = 439
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRVD--NACTEKSRMEMQSLL 106
>gi|66516308|ref|XP_623321.1| PREDICTED: cleavage stimulation factor subunit 2 [Apis mellifera]
Length = 441
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQSLL 106
>gi|383860217|ref|XP_003705587.1| PREDICTED: cleavage stimulation factor subunit 2-like [Megachile
rotundata]
Length = 441
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQSLL 106
>gi|193671655|ref|XP_001946102.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Acyrthosiphon pisum]
Length = 388
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 14 VFVGNIPYEATEEKLKDIFNEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S++
Sbjct: 74 NGYEIGGRTLRV--DNACTEKSRLEMQSLM 101
>gi|380028061|ref|XP_003697730.1| PREDICTED: cleavage stimulation factor subunit 2-like [Apis florea]
Length = 441
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQSLL 106
>gi|260790683|ref|XP_002590371.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
gi|229275563|gb|EEN46382.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
Length = 222
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%)
Query: 136 LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKG 195
+AAVGL VFVG +PY TE Q+K++ G + F LV DR+TG KG
Sbjct: 1 MAAVGLQGLNPAQDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGKPKG 60
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQ 249
YGFC Y+D A LNG ++ + L V A + + + +Q ++ +Q+
Sbjct: 61 YGFCEYKDQETALSAMRNLNGHELNGRQLRVDNAASEKSKEELKQLTVAGPSQE 114
>gi|322788027|gb|EFZ13868.1| hypothetical protein SINV_14012 [Solenopsis invicta]
Length = 291
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQSLL 106
>gi|60599450|gb|AAX26270.1| unknown [Schistosoma japonicum]
Length = 156
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
Query: 217 LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI-AIQKMALQTSGMNTLGGGMSLF-- 273
+++GDK L V+RA+ + + +L Q + ++ +Q NT G G
Sbjct: 1 MQLGDKKLIVQRASVGAKHTT----GVLPQTLLSLPGLEDGTVQ----NTTGSGNITIRS 52
Query: 274 GETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGV 333
G +VLCL I L DDEEYE+I+ED+R EC KYG + ++ IPRP G E PGV
Sbjct: 53 GGPPTEVLCLMNMIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIP-GVEVPGV 111
Query: 334 GKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
GK+++E+ + C A AL+GRKF V ++ D Y +++
Sbjct: 112 GKIYVEFASLIDCQKAATALTGRKFNQRLVVTSFFSPDNYHRREF 156
>gi|307172466|gb|EFN63915.1| Cleavage stimulation factor 64 kDa subunit [Camponotus floridanus]
Length = 438
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQSLL 106
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 27/204 (13%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK---FAFVE 86
R AR V+V L ++ + FF+ V G V + N K+ A+VE
Sbjct: 76 RDARTVFVWQLSARIRQRDLEDFFTSV---------GKIRDVRLIMDNKTKRSKGIAYVE 126
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
R VE A A+ L G GV +++++ + A P P P
Sbjct: 127 FREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRMNAI--PSVPKPTQQ----------- 173
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP ++++G L Y TE +K + E FG + L+KD TG S+GYGF Y +
Sbjct: 174 --NRGPMKLYIGSLHYNITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFVTYANSDD 231
Query: 207 TDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 232 AKKALDQLNGFELAGRPMKVNHVT 255
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 104/265 (39%), Gaps = 41/265 (15%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 235 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 294
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 295 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 354
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALA 293
+ ++A+ + +Q + ALQ SG G V L ++ A
Sbjct: 355 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGA-----------VADLQTRLSQQTEA 403
Query: 294 DDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGV---GKVFLEYYDAVGCATAK 350
++ + +C + + N P+ N P G V+++ A
Sbjct: 404 SALAAAASVQPLATQCFQLSNMFN---PQTQWNNYHKPFCGYRGNVYVKCPSIAAAIAAV 460
Query: 351 NALSGRKFGGNTVNAFYYPEDKYFN 375
NAL GR F G + A Y P Y N
Sbjct: 461 NALHGRWFAGKMITAAYVPLPTYHN 485
>gi|332026262|gb|EGI66401.1| Cleavage stimulation factor 64 kDa subunit [Acromyrmex echinatior]
Length = 480
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E +S+L
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQSLL 106
>gi|313234527|emb|CBY10484.1| unnamed protein product [Oikopleura dioica]
Length = 333
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA- 213
VFVG +PY TE QI+++ G + F LV DR+TG KGYGFC Y+D TD A +A
Sbjct: 27 VFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKD---TDTAMSAM 83
Query: 214 --LNGLKMGDKTLTVRRATASSGQSKTE-QESILA 245
LN ++ + L V AT G K + Q S++A
Sbjct: 84 RNLNTRELHGRNLRVDHATRDHGVEKEQPQASVIA 118
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK---FAFVE 86
R R V+ LP A E+ + FFS+ AGP + V + + +K FA++E
Sbjct: 123 RDIRTVFAYNLPLKAEERDLFEFFSK---------AGPIEDVKIIMDRNTRKSKGFAYIE 173
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+ AMAL G I G AV V+ ++ LA Q + L ++ +G A
Sbjct: 174 YTNKADIVTAMALTGQILMGQAVMVK-SSEAEKNLAWEAAQAQNASMLQMSTIGNA---- 228
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP ++++G L E +K++ E+FG + L KD TG S+GYGF YQ
Sbjct: 229 --GTGPCKLYIGNLHPNIQEQDLKQVFEAFGAVEYITLQKD-PTGRSQGYGFVQYQTTPD 285
Query: 207 TDIACAALNGLKMGDKTLTVR 227
A L+GL + ++V+
Sbjct: 286 ATKAMQQLDGLDIAGSQISVK 306
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 299 EEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKF 358
+EI D+ EEC KYG + + + D+N G V+L++ G A A+ AL GR F
Sbjct: 425 QEIATDVTEECSKYGPVSHTHV---DKNSK-----GFVYLKFVTVEGSAAAQKALHGRWF 476
Query: 359 GGNTVNAFY 367
G V A +
Sbjct: 477 AGRQVVAEF 485
>gi|242018247|ref|XP_002429590.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
gi|212514557|gb|EEB16852.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
Length = 408
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +P+ TE ++KE+ G + F LV DR+ G KGYGFC Y+D + A L
Sbjct: 16 VFVGNIPFDLTEEKLKEIFSEVGPVLSFKLVYDRENGKPKGYGFCEYKDIETANSAMRNL 75
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHI 251
NG ++G + L V A++ +++ E ++++ QA + I
Sbjct: 76 NGFEIGGRVLKV--DNAANEKTRMEMQNMI-QANEPI 109
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 34 RVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEA 93
++YVG L +++ + FSQ + V++ + FAFV M + + A
Sbjct: 91 KLYVGNLAWSCDDEMLNQAFSQF------GEVKAAEVVLDRESGRSRGFAFVTMASPDAA 144
Query: 94 SNAM-ALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAEGP 152
A LDG G A+RV P A + + G G A
Sbjct: 145 EKARRGLDGTELAGRAIRVNFPQPKGERAPRAERGERSERSERSERTYTPRGD-GEAGDA 203
Query: 153 DRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACA 212
+R++VG LP+ + +++L FGT++ +V DRD+G S+G+ F P + A A
Sbjct: 204 NRLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRSRGFAFVALSTPEEANEAMA 263
Query: 213 ALNGLKMGDKTLTVRRATASSG 234
L+G ++G +T+ V AT SSG
Sbjct: 264 NLDGEEIGGRTIRVNLATKSSG 285
>gi|332372985|gb|AEE61634.1| unknown [Dendroctonus ponderosae]
Length = 409
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
NG ++G ++L V A + +S+ E +++L Q
Sbjct: 76 NGYEIGGRSLRV--DNACTEKSRMEMQNLLNQ 105
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 145/378 (38%), Gaps = 68/378 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS S G V + N ++F A+VE
Sbjct: 166 RDARTVFCMQLSQRIRARDLEEFFS---------SVGKVQDVRLITCNKTRRFKGIAYVE 216
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+ E + A+ L G GV + V+ T A G PNL
Sbjct: 217 FKDPESVTLALGLSGQKLLGVPIVVQH------TQAEKNRMGNSMPNL----------MP 260
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF +++
Sbjct: 261 KGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD 320
Query: 207 TDIACAALNGLKMGDKTLTV----RRATASSGQSKTEQESILAQAQQHIAIQKMALQTSG 262
A LNG ++ + + V R G S + + + A ++ L
Sbjct: 321 AKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTDELDRSGIDLGATGRLQL---- 376
Query: 263 MNTLGGGMSL-------FGETLAKVL------------CLTEAITADALAD--DEEYEEI 301
M L G L +A V+ T+ + D +E
Sbjct: 377 MFKLAEGTGLEIPPAAANALNMAPVMAQPQPPPQAAPPIATQCFMLSNMFDPQNETNPNW 436
Query: 302 LEDMRE----ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRK 357
+++R+ EC K+G +++V + DQ + G V+++ A N+L GR
Sbjct: 437 AKEIRDDVIEECNKHGGVLHVYV---DQASPQ----GNVYVKCPSIATAVAAVNSLHGRW 489
Query: 358 FGGNTVNAFYYPEDKYFN 375
F G + A Y P Y +
Sbjct: 490 FAGRVITAAYVPVVNYHS 507
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 144/363 (39%), Gaps = 47/363 (12%)
Query: 27 QATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 86
Q R +R V++ L + I FFS+V + + K +VE
Sbjct: 178 QEERDSRTVFIMQLAKQVTIRDIQDFFSKV------GQVRDVRLISDRNSRRSKGIGYVE 231
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+ A+ L G GV + V +PT+A N A A A+
Sbjct: 232 FTDASAVTLAIKLSGQKLLGVPIMV------SPTMAEK----------NRYAA--AQAAL 273
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
+GP +++VG L Y TE ++ + E FGT+ L D +T SKG+GF +++
Sbjct: 274 VKPQGPMKLYVGSLHYNITEPMLRAIFEPFGTVESVQLQYDSETNRSKGFGFVNFREAGA 333
Query: 207 TDIACAALNGLKMGDKTLTVRRATASSGQS-------KTEQESILAQAQQHIAI-QKMA- 257
A +NG ++ + + V + + S +TE+ I AQ ++ QK+A
Sbjct: 334 AKRAMEQMNGFELAGRPMKVNTVSERTDGSMSFLDDEETEKGGIEMNAQSRASLMQKLAQ 393
Query: 258 -----LQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDE-EYE-EILEDMREECG 310
LQ + + +A CL + D + E ++E +I D+ EE
Sbjct: 394 THGSGLQVPTAPIIPAMLPTPMMNVAGSTCLILSNLFDPRKETESDWELDIRNDVLEEVT 453
Query: 311 KYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPE 370
K G +V++ I D+ E G V+++ +GR F G T+ A P
Sbjct: 454 KMGIVVHISI---DKISAE----GNVYIKTLIPDTAQKILQTFNGRWFAGRTIRAVAIPV 506
Query: 371 DKY 373
Y
Sbjct: 507 ANY 509
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|59808930|gb|AAH89996.1| U2af2 protein, partial [Rattus norvegicus]
Length = 88
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
EI+ED+R+EC KYG + ++ IPRP +G E PG GK+F+E+ C A L+GRKF
Sbjct: 10 EIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFA 68
Query: 360 GNTVNAFYYPEDKYFNKDY 378
V Y D Y +D+
Sbjct: 69 NRVVVTKYCDPDSYHRRDF 87
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
(Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 28/200 (14%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 186 RDARTVFCMQLSQRIRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 236
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+ E + A+ L G G+ + V+ +A+ P QP P +
Sbjct: 237 FKDPESVALALGLSGQRLLGIPISVQHTQAEKNRMAST--PPQPPPKV------------ 282
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R++VG L + TE ++ + E FG + L+ D DTG SKGYGF + +
Sbjct: 283 --TSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADD 340
Query: 207 TDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 341 AKKALEQLNGFELAGRPMKV 360
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
EI +D+ EEC K+G +++V + + E P G V+++ A NAL GR F
Sbjct: 458 EIEDDVIEECNKHGGVLHVYVDK------ENPA-GNVYVKCPSIATAVLAVNALHGRWFA 510
Query: 360 GNTVNAFYYP 369
G + A Y P
Sbjct: 511 GRIITAAYVP 520
>gi|281209343|gb|EFA83511.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 1109
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 54/251 (21%)
Query: 153 DRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACA 212
+R++VG +P+ E QIK + S G + L+ + ++G KG+GF Y + + A A
Sbjct: 873 NRIYVGSIPWNVNEDQIKVIFSSIGNVVSCSLMPNLESGRHKGFGFIDYDNSKSAEDAIA 932
Query: 213 ALNGLKMGDKTLTVRR-----ATASSGQSK---------------------TEQESILAQ 246
LNG +G + L V R + +SS +SK E + L+
Sbjct: 933 TLNGYDIGGRQLKVGRPIKNASISSSNESKQTTPLSTPMVPTLSSSVGTDSIEDDVTLST 992
Query: 247 AQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILED-M 305
Q+ + QK+ Q T + L L L +E ++ E+ +
Sbjct: 993 EQRILLTQKLLRQD------------ISRTSNRCLVLRN------LGSPKEIDDFFEEEI 1034
Query: 306 REECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNA 365
+ EC +G + V+ K F+ + + CAT N +GR F G V A
Sbjct: 1035 KAECMSFGQVEKFVLTHD--------ASVKAFILFKEPAACATCFNKQNGRYFSGYIVKA 1086
Query: 366 FYYPEDKYFNK 376
YY + FNK
Sbjct: 1087 EYY-DISLFNK 1096
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
R+++G + + TET + + FG + L KD TG SKGY F Y P + A +
Sbjct: 686 RIYIGNIHFNLTETDLTSIFSPFGPIKSLSLSKDPATGKSKGYCFIEYSYPEAANNAISH 745
Query: 214 LNGLKMGDKTLTVRR 228
+N + + + V R
Sbjct: 746 MNHQSLAGRQIKVGR 760
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY +E Q+KE+ + G + F LV DR+TG KGYGFC YQD A L
Sbjct: 26 VFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRETGKPKGYGFCEYQDVETAQSAMRNL 85
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
N + L V A+ QSK E +S+
Sbjct: 86 NNYDYNGRPLRV--GVAAGEQSKDENKSM 112
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|270000744|gb|EEZ97191.1| hypothetical protein TcasGA2_TC004378 [Tribolium castaneum]
Length = 409
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
NG ++G + L V A + +S+ E +++L Q
Sbjct: 76 NGYEIGGRNLRV--DNACTEKSRMEMQNLLNQ 105
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|391347243|ref|XP_003747874.1| PREDICTED: cleavage stimulation factor subunit 2-like [Metaseiulus
occidentalis]
Length = 422
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K + E G + F LV DR+TG KGYGFC ++D A L
Sbjct: 20 VFVGNIPYDATEEQLKTIFEEVGPVVNFRLVYDRETGKPKGYGFCEFKDQETAMSAMRNL 79
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
N ++G + L V A+S ++K E +++ AQ
Sbjct: 80 NSFEIGGRALRV--DHAASERNKEELKALYAQ 109
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 29 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 88
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 89 NGREFSGRALRV--DNAASEKNKEELKSL 115
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|384247050|gb|EIE20538.1| hypothetical protein COCSUDRAFT_54348 [Coccomyxa subellipsoidea
C-169]
Length = 213
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREEC-GKYGTLVNVVIPRPDQNG--GETPGVG 334
++VL L +T + L D EEY +I++D+ E KYGTL ++VIP+P Q G + GVG
Sbjct: 110 SRVLRLANMVTREELLDPEEYSDIVDDITSELESKYGTLSSLVIPQPSQKGPASDPSGVG 169
Query: 335 KVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDY 378
VF+++ A+ L+GRKFG +++ ++ E + K +
Sbjct: 170 LVFVQFPKLSDAVKAQEKLNGRKFGAGNIHSEFFDEGLFQRKHF 213
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|343429703|emb|CBQ73275.1| related to Cleavage stimulation factor [Sporisorium reilianum SRZ2]
Length = 391
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 151 GPDR----VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R VFVG +PY +E Q+ ++ G + GF LV DRDTG KGYGFC ++DP
Sbjct: 3 GPQRGSRVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRDTGKFKGYGFCEFEDPET 62
Query: 207 TDIACAALNGLKMGDKTLTV 226
A LN +++G + L +
Sbjct: 63 AASAVRNLNEVEVGGRPLRI 82
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 30 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 89
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 90 NGREFSGRALRV--DNAASEKNKEELKSL 116
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 91 NGREFSGRALRV--DNAASEKNKEELKSL 117
>gi|297801306|ref|XP_002868537.1| hypothetical protein ARALYDRAFT_355725 [Arabidopsis lyrata subsp.
lyrata]
gi|297314373|gb|EFH44796.1| hypothetical protein ARALYDRAFT_355725 [Arabidopsis lyrata subsp.
lyrata]
Length = 1370
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 29/196 (14%)
Query: 23 VMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF 82
V ++TR RR+Y + A+E+++ F+ M + G N + ++ IN EK
Sbjct: 892 VQLTESTRRMRRLYAENVSDSASEKSLIECFNSYMLSSGSNHIKGSEPCISCIINKEKSQ 951
Query: 83 AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALG-------PGQPS---- 131
A VE T +AS A++LDG F G+ +++RRP Y T +G G +
Sbjct: 952 ALVEFLTPHDASAALSLDGCSFAGLNLKIRRPKGYVETTGVYVGYVIIHIQEGDEAVCYV 1011
Query: 132 ------PNLNLAAVGLASGAIGGAE------------GPDRVFVGGLPYYFTETQIKELL 173
A+ + SG + E +++F+GG P + + E++
Sbjct: 1012 MVTIHEAGFQTVAIFMQSGELAKKEPATNAISDNVKDSSNKIFIGGFPKSISSEMLMEIV 1071
Query: 174 ESFGTLHGFDLVKDRD 189
FG L + V + D
Sbjct: 1072 SVFGPLKAYRFVINND 1087
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 136/370 (36%), Gaps = 66/370 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 239 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 289
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
E + A+ L G GV + V+ L +A P QP +
Sbjct: 290 FEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHT------------ 337
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF Y +
Sbjct: 338 ----GPMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADD 393
Query: 207 TDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
A LNG +K+G+ T + T+S + ++ I A + + +
Sbjct: 394 AKKALEQLNGFELAGRPMKVGNVTERLDMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAE 453
Query: 260 TSGM--------------------NTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
+G+ S+ + + D + E
Sbjct: 454 GAGLAVPQAAANALLATAPQPAPLQQQQQTPSIATQCFILSNMFDPRTETNPTWDTDVRE 513
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
++L +EC K+G ++++ + G V+++ A NAL GR F
Sbjct: 514 DVL----DECAKHGGVLHIHV-------DTVSPTGTVYVKCPSTTTAVLAVNALHGRWFA 562
Query: 360 GNTVNAFYYP 369
G + A Y P
Sbjct: 563 GRVITAAYVP 572
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 138/370 (37%), Gaps = 66/370 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 268 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 318
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
E + A+ L G GV + V+ L +A P QP +
Sbjct: 319 FEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKLHT------------ 366
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF Y +
Sbjct: 367 ----GPMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDNETGRSKGYGFITYHNADD 422
Query: 207 TDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQ-KMAL 258
A LNG +K+G+ T + T+S + ++ I A + + K+A
Sbjct: 423 AKKALEQLNGFELAGRPMKVGNVTERLDMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAE 482
Query: 259 -------------------QTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYE 299
Q + M S+ + + D E +
Sbjct: 483 GAGLAVPQAAANALLATAPQPAPMQHEQQTPSIATQCFILSNMFDPRTETNPTWDTEVRD 542
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
++L EEC K+G ++++ + G V+++ A N+L GR F
Sbjct: 543 DVL----EECTKHGGVLHIHV-------DTVSATGTVYVKCPSTATAVLAVNSLHGRWFA 591
Query: 360 GNTVNAFYYP 369
G + A Y P
Sbjct: 592 GRVITAAYVP 601
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 76
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 77 NGREFSGRALRV--DNAASEKNKEELKSL 103
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 91 NGREFSGRALRV--DNAASEKNKEELKSL 117
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|91094479|ref|XP_970762.1| PREDICTED: similar to cleavage stimulation factor 64-kDa subunit
[Tribolium castaneum]
Length = 424
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
NG ++G + L V A + +S+ E +++L Q
Sbjct: 76 NGYEIGGRNLRV--DNACTEKSRMEMQNLLNQ 105
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 16 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 75
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 76 NGREFSGRALRV--DNAASEKNKEELKSL 102
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRVD--NAASEKNKEELKSL 104
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 91 NGREFSGRALRV--DNAASEKNKEELKSL 117
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 52 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 111
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 112 NGREFSGRALRV--DNAASEKNKEELKSL 138
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|102269210|gb|ABF55966.2| cleavage stimulation factor 64-kDa subunit [Bombyx mori]
Length = 326
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 20 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 79
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G ++L V A + +S+ E ++++ Q
Sbjct: 80 NGYEIGGRSLRV--DNACTEKSRMEMQALMQGPQ 111
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|62896707|dbj|BAD96294.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant variant [Homo sapiens]
Length = 616
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 597
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 91 NGREFSGRALRV--DNAASEKNKEELKSL 117
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 647
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 86 NGREFSGRALRV--DNAASEKNKEELKSL 112
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 86 NGREFSGRALRV--DNAASEKNKEELKSL 112
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis davidii]
Length = 641
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|255089613|ref|XP_002506728.1| predicted protein [Micromonas sp. RCC299]
gi|226522001|gb|ACO67986.1| predicted protein [Micromonas sp. RCC299]
Length = 317
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%)
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
P +VFVG +PY TE +++++ G +H F LV DR+TG KGYGFC Y D A + A
Sbjct: 5 PYQVFVGNVPYDATEERLRDMFSEVGPVHDFRLVTDRETGKLKGYGFCEYMDLATAESAK 64
Query: 212 AALNGLKMGDKTLTVRRATAS 232
LNG + + L V A A+
Sbjct: 65 RNLNGREYNGRNLRVDFADAA 85
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|357627631|gb|EHJ77269.1| hypothetical protein KGM_03087 [Danaus plexippus]
Length = 425
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 8 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 67
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G ++L V A + +S+ E ++++
Sbjct: 68 NGYEIGGRSLRV--DNACTEKSRMEMQALM 95
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRVD--NAASEKNKEELKSL 104
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRVD--NAASEKNKEELKSL 104
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 28 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 87
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 88 NGREFSGRALRV--DNAASEKNKEELKSL 114
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 8 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 67
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 68 NGREFSGRALRV--DNAASEKNKEELKSL 94
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pongo
abelii]
Length = 625
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Cricetulus
griseus]
Length = 645
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|330793087|ref|XP_003284617.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
gi|325085416|gb|EGC38823.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
Length = 829
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 153 DRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACA 212
+R+++G + + TE QI+ + FG + L+++ +TG KGYGF +++ D A
Sbjct: 622 NRIYIGSINWNVTEEQIRGIFSQFGKIISCFLMQNTETGKHKGYGFIDFENKKSADDAL- 680
Query: 213 ALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSL 272
A+NG ++ + + V R T + + SI +++ A+ T+ + L
Sbjct: 681 AMNGFELLGRAMKVGRPTKGASANTISNGSI-----DKTSLEGEAMLTTSDQRIQLTQKL 735
Query: 273 FGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPG 332
G K L L A + D + D +E ED+R C ++G + +VI + D
Sbjct: 736 LGNE-NKCLVLRNAGSPDDI--DPSFE---EDIRSGCNEFGEIEKLVI-KTDS------S 782
Query: 333 VGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNK 376
+V++ + +A C ++ L+G+ F + + A +Y + FNK
Sbjct: 783 TVRVYIVFKEAPSCVACQSKLNGKYFSYHCIKAEFY-DINLFNK 825
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
RV++G L + E I + FGT+ L KD + G SKGY F Y+ P A +
Sbjct: 464 RVYIGNLHFSLAEDAIIQAFSQFGTVKSILLGKDAN-GKSKGYAFIEYESPDSATKAIES 522
Query: 214 LNGLKMGDKTLTVRRATASSGQ 235
++ M + + V R A Q
Sbjct: 523 MSNYVMAGRVIKVNRPLAGGQQ 544
>gi|313243391|emb|CBY42167.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA- 213
VFVG +PY TE QI+++ G + F LV DR+TG KGYGFC Y+D TD A +A
Sbjct: 27 VFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKD---TDTAMSAM 83
Query: 214 --LNGLKMGDKTLTVRRATASSGQSKTEQESILAQA 247
LN ++ + L V AT G K + ++ ++++
Sbjct: 84 RNLNTRELHGRNLRVDHATRDHGVEKEQPQASVSRS 119
>gi|198424504|ref|XP_002131946.1| PREDICTED: similar to poly-U binding splicing factor 60KDa [Ciona
intestinalis]
Length = 491
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 275 ETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGE-TPGV 333
E +KV+ L + + + DD E E + EECGK+G++ VVI + Q+ E P
Sbjct: 390 EEASKVMVLHNMVDVEEIDDDLESE-----VTEECGKFGSVSRVVIYQEKQSEAEDAPVT 444
Query: 334 GKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
K+++E+ D+V C A +L+GR FGG + A YP+ K+ + D +
Sbjct: 445 VKIYVEFTDSVFCKKAVESLNGRWFGGRKIEAIIYPQHKFNHNDLT 490
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 35/215 (16%)
Query: 26 QQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAV---VNVYINHEKKF 82
QQA RVYVG + E+ I FS GP ++ + K F
Sbjct: 91 QQALVLMCRVYVGSIYYDLKEEIIRNAFSPF---------GPFKSINMSFDPITGKHKGF 141
Query: 83 AFVEMRTVEEASNAMALD---GIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
AF+E T E A ++LD G++ G +++V RP + Q P ++L
Sbjct: 142 AFIEYETPEAAQ--LSLDQMGGVMLGGRSIKVGRPANM----------PQSHPVIDLL-- 187
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+ ++ R+++ + +K + +FG + LV D TG KGYGF
Sbjct: 188 ------LDESKMQKRIYISSVHTDLNTEDLKSVFSAFGNILSCALVPDVLTGKHKGYGFI 241
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSG 234
Y + A A++N +G + L V +A A G
Sbjct: 242 EYDTLQAANDAVASMNLFDLGGQYLRVGKAIAPVG 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
RV+VG + Y E I+ FG ++ D TG KG+ F Y+ P ++
Sbjct: 99 RVYVGSIYYDLKEEIIRNAFSPFGPFKSINMSFDPITGKHKGFAFIEYETPEAAQLSLDQ 158
Query: 214 LNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNT--LGGGMS 271
+ G+ +G +++ V R A+ QS + +L +++ I ++ T +NT L S
Sbjct: 159 MGGVMLGGRSIKVGRP-ANMPQSHPVIDLLLDESKMQKRIYISSVHTD-LNTEDLKSVFS 216
Query: 272 LFGETLAKVLC 282
FG L+ L
Sbjct: 217 AFGNILSCALV 227
>gi|321479154|gb|EFX90110.1| hypothetical protein DAPPUDRAFT_299933 [Daphnia pulex]
Length = 381
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + F +V DR+TG KGYGFC Y+D A L
Sbjct: 16 VFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFCEYRDQETALCAMRNL 75
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQ 246
NG ++ +TL V A + +S+ E +S++ +
Sbjct: 76 NGYEIAGRTLRV--DNACTEKSRLEMQSLMQE 105
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 140/366 (38%), Gaps = 58/366 (15%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 264 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 314
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
E + A+ L G GV + V+ L A QP ++
Sbjct: 315 FEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHV------------ 362
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R++VG L + TE ++ + E FG + L+ D +T SKGYGF Y +
Sbjct: 363 ----GPMRLYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAED 418
Query: 207 TDIACAALNG-------LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQ 259
A LNG +K+G+ T + T S + ++ I A + + +
Sbjct: 419 AKKALEQLNGFELAGRPMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAE 478
Query: 260 TSGMNTLGGGMSLFGETLAKVLCLTEAITADALAD---------DEEYE-------EILE 303
+G+ + T + + + ++A D E EI +
Sbjct: 479 GAGLAVPQAAANALLATAPQPAPVQQQQATPSIATQCFILSNMFDPRTETNPTWDVEIRD 538
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
D+ EEC K+G ++++ + +P G V+++ A NAL GR F G +
Sbjct: 539 DVLEECAKHGGVLHIHV------DTASP-TGTVYVKCPSTTTAVLAVNALHGRWFAGRVI 591
Query: 364 NAFYYP 369
A Y P
Sbjct: 592 TAAYVP 597
>gi|224081877|ref|XP_002306512.1| predicted protein [Populus trichocarpa]
gi|222855961|gb|EEE93508.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 139/350 (39%), Gaps = 75/350 (21%)
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNL-N 135
K +VE A+AL G + G V V+ P + NL
Sbjct: 32 RRSKGVGYVEFYDAMSVPMAIALSGQLLFGQPVMVK--------------PSEAEKNLVQ 77
Query: 136 LAAVGLASGAIGGAEGP-DR-VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNS 193
+A + + G GP DR ++VG L + TE Q+++L E FGT+ L D +TG
Sbjct: 78 SSASSGGTSGVAGPFGPVDRKLYVGNLHFNMTEMQLRQLFEPFGTVELVQLPLDLETGQC 137
Query: 194 KGYGFCVYQDPAVTDIACAALNG-LKMGDKTLTVRRATASSGQSKTEQES---------I 243
KG+GF + A +ALNG L++ +T+ V T GQ T +S
Sbjct: 138 KGFGFVQFTQLENAKAAQSALNGKLEIAGRTIKVSSVTEHGGQQDTGAKSADFDDDDGGG 197
Query: 244 LAQAQQHIAIQKMALQTSGMNT----------LGGGMS--------LFGETL-------A 278
LA Q A+ L +G+ T L G S + G+T A
Sbjct: 198 LALNAQSRALLMQKLDRTGIATSIAGSLGVPLLNGSASNQQAISLPIIGQTAIGAAALPA 257
Query: 279 KVL-------------CLTEAITADALADDE-EYE-EILEDMREECGKYGTLVNVVIPRP 323
VL CL D + E +++ +I ED+ EEC KYG + ++ +
Sbjct: 258 PVLSSPAYEPIGQPSECLMLKNMFDPATETEPDFDLDIKEDVEEECSKYGQVEHIFV--- 314
Query: 324 DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
D+N G V+L + A A+ A+ R F + A + P +Y
Sbjct: 315 DKN-----STGCVYLRFGSIEAAAGAQRAMHMRWFARRLILAVFMPTREY 359
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 29/210 (13%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P++ M+Q+ R AR V+ L + + + FFS V G V + N
Sbjct: 159 PLEEMSQE-DRDARTVFCMQLSQRIHARDLEEFFSSV---------GKVRDVRLITCNKT 208
Query: 80 KKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
K+F A++E + E + A+ L G G+ + V+ T A+ P P N
Sbjct: 209 KRFKGIAYIEFKDPESVALALGLSGQKLLGIPISVQH-TQAEKNRMASQPPVAPPKN--- 264
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
GP R++VG L + TE + + E FG + L+ D DTG SKGY
Sbjct: 265 ------------PSGPMRLYVGSLHFNITEDMLNGIFEPFGKIDNIQLIMDADTGRSKGY 312
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTV 226
GF + + A LNG ++ + + V
Sbjct: 313 GFITFHNADDAKKALEQLNGFELAGRPMKV 342
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 300 EILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
EI +D+ EEC K+G + +V + + ++P G V+++ A NAL GR F
Sbjct: 440 EIQDDVIEECNKHGGVQHVYVDK------QSPS-GNVYVKCPSIATAVLAVNALHGRWFA 492
Query: 360 GNTVNAFYYPEDKYFN 375
G + A Y P Y+N
Sbjct: 493 GRVIGAAYVPLINYYN 508
>gi|294659352|ref|XP_461720.2| DEHA2G04004p [Debaryomyces hansenii CBS767]
gi|199433897|emb|CAG90172.2| DEHA2G04004p [Debaryomyces hansenii CBS767]
Length = 636
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 42/314 (13%)
Query: 78 HEKKFAFVEMRTVEEASNAMALDGI---IFEGVAVRVRRPTDYNPTLAAALGPGQPSPNL 134
+ +K +F EM+ V+ + I + + + + RP +Y + L P
Sbjct: 346 NSRKLSFNEMKLVKNDDEGNPIHQIGQDTGDDIVLDISRPGEY---VVQCLPP------- 395
Query: 135 NLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSK 194
+ + + P ++ V +P ET++ + ++ GT+ GF ++++ T S
Sbjct: 396 -YSEIKEDEIEESVTDSPRKITVL-VPSTLDETELIKNIKEVGTIKGFQMLREIGTKKSL 453
Query: 195 GYGFC-VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQA------ 247
G F Y DP A+ ++ + L +Q S + A
Sbjct: 454 GIAFLEFYIDPTKYQKTINAIPVIQTLVEDL--------------KQSSFIEDAFFSCII 499
Query: 248 QQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMRE 307
H +IQ + S + L + ++V+ L +TA L DD ++ I +D+++
Sbjct: 500 PDHTSIQDCPIDLSTLKKLVKNEHVTTHPSSRVIQLINIVTAKDLMDDASFKFIQKDIQQ 559
Query: 308 ECGKYGTLVNVVIPRP--DQNGG----ETPGVGKVFLEYYDAVGCATAKNALSGRKFGGN 361
E K+G L + IPRP D G PG+GK+++E+ D A L+GR +
Sbjct: 560 EVSKFGNLKTIKIPRPANDYTPGISQFTQPGLGKIYIEFDDEETALNAIMGLAGRMYNDR 619
Query: 362 TVNAFYYPEDKYFN 375
TV +Y D + N
Sbjct: 620 TVLCSFYDYDDFKN 633
>gi|222619898|gb|EEE56030.1| hypothetical protein OsJ_04814 [Oryza sativa Japonica Group]
Length = 658
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ P ++F+ G+P + +++++ SFG L + + + D G F Y D ++T
Sbjct: 375 DSPHKIFIAGIPRVISSKMLRDIVSSFGQLAAYRFLFNEDLGG--ACAFLEYIDHSITSK 432
Query: 210 ACAALNGLKMGDKTLT-VRRATASSGQSKTEQ---ESILAQAQQHIAIQKMALQTSGMNT 265
ACA LNG+K+G +T V T GQ+ E I A + +A+ LQ
Sbjct: 433 ACAGLNGMKLGGCVITAVGVLTDHPGQAGNEACPFHGIPANPKPLLAVPTQVLQLK---- 488
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL--VNVVIPRP 323
++F + +L E + +LED+R +C +YG + +NVV
Sbjct: 489 -----NVFDQ------------EEYSLLSKYEVDAVLEDVRVKCARYGAVKSINVVEYPA 531
Query: 324 DQNGGETPGV----------------GKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ + P V G + +E+ A ++L GR FG V+A Y
Sbjct: 532 GSDNTKAPAVDARDNALASNNTALEAGCILVEFLCKEASFMAAHSLHGRPFGSRIVSAGY 591
Query: 368 YPED 371
P D
Sbjct: 592 APYD 595
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 28/200 (14%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R AR V+ L + + FFS V G V + N K+F A++E
Sbjct: 257 RDARTVFCIQLSQRVRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 307
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
E + A+ L G GV + V+ L +A P QP +
Sbjct: 308 FEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHT------------ 355
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF Y +
Sbjct: 356 ----GPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADD 411
Query: 207 TDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 412 AKKALEQLNGFELAGRPMKV 431
>gi|218189760|gb|EEC72187.1| hypothetical protein OsI_05261 [Oryza sativa Indica Group]
Length = 485
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 45/244 (18%)
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ P ++F+ G+P + +++++ SFG L + + + D G + F Y D ++T
Sbjct: 259 DSPHKIFIAGIPRVISSKMLRDIVSSFGQLAAYRFLFNEDLGGA--CAFLEYIDHSITSK 316
Query: 210 ACAALNGLKMGDKTLT-VRRATASSGQSKTEQ---ESILAQAQQHIAIQKMALQTSGMNT 265
ACA LNG+K+G +T V T GQ+ E I A + +A+ LQ
Sbjct: 317 ACAGLNGMKLGGCVITAVGVLTDHPGQAGNEACPFHGIPANPKPLLAVPTQVLQLK---- 372
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL--VNVVIPRP 323
++F + +L E + +LED+R +C +YG + +NVV
Sbjct: 373 -----NVFDQEEYSLL------------SKYEVDAVLEDVRVKCARYGAVKSINVVEYPA 415
Query: 324 DQNGGETPGV----------------GKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ + P V G + +E+ A ++L GR FG V+A Y
Sbjct: 416 GSDNTKAPAVDARDNALASNNTALEAGCILVEFLCKEASFMAAHSLHGRPFGSRIVSAGY 475
Query: 368 YPED 371
P D
Sbjct: 476 APYD 479
>gi|294936223|ref|XP_002781665.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Perkinsus
marinus ATCC 50983]
gi|239892587|gb|EER13460.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Perkinsus
marinus ATCC 50983]
Length = 482
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP-GDAVV--NVYINHEKKFAFVEMRT 89
++V+VGGLP A++ A+ +FSQ GP D+VV + + + F FV T
Sbjct: 171 KKVFVGGLPREADKPALDAYFSQF---------GPVEDSVVMMDRFTGRSRGFGFVTFET 221
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA----ALGPGQPSPNLNLAAVGLASGA 145
E+ +A + G +V VRR + + T A + G G +P N G G
Sbjct: 222 KEQMLGCVAAAPHVIMGKSVEVRRSINDDGTSTAHERRSAGKGAGAPR-NYDDYGSGKGG 280
Query: 146 IGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPA 205
+ P+++FVGGLP T +++ +G L ++ DR TG S+G+G+ Y+D +
Sbjct: 281 HRD-QNPNKLFVGGLPREITSEALRDFFIQYGNLVDCTVITDRMTGQSRGFGYVTYEDSS 339
Query: 206 VTDIACAALNGLKMGDKTLTVRRAT 230
+ A + + K + V+ T
Sbjct: 340 AAEAAISNSANNIIDGKWVDVKHTT 364
>gi|115442323|ref|NP_001045441.1| Os01g0956600 [Oryza sativa Japonica Group]
gi|57900079|dbj|BAD88141.1| splicing factor family protein-like [Oryza sativa Japonica Group]
gi|57900192|dbj|BAD88277.1| splicing factor family protein-like [Oryza sativa Japonica Group]
gi|113534972|dbj|BAF07355.1| Os01g0956600 [Oryza sativa Japonica Group]
gi|215736836|dbj|BAG95765.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 608
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 45/244 (18%)
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ P ++F+ G+P + +++++ SFG L + + + D G + F Y D ++T
Sbjct: 375 DSPHKIFIAGIPRVISSKMLRDIVSSFGQLAAYRFLFNEDLGGA--CAFLEYIDHSITSK 432
Query: 210 ACAALNGLKMGDKTLT-VRRATASSGQSKTEQ---ESILAQAQQHIAIQKMALQTSGMNT 265
ACA LNG+K+G +T V T GQ+ E I A + +A+ LQ
Sbjct: 433 ACAGLNGMKLGGCVITAVGVLTDHPGQAGNEACPFHGIPANPKPLLAVPTQVLQLK---- 488
Query: 266 LGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL--VNVVIPRP 323
++F + +L E + +LED+R +C +YG + +NVV
Sbjct: 489 -----NVFDQ------------EEYSLLSKYEVDAVLEDVRVKCARYGAVKSINVVEYPA 531
Query: 324 DQNGGETPGV----------------GKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
+ + P V G + +E+ A ++L GR FG V+A Y
Sbjct: 532 GSDNTKAPAVDARDNALASNNTALEAGCILVEFLCKEASFMAAHSLHGRPFGSRIVSAGY 591
Query: 368 YPED 371
P D
Sbjct: 592 APYD 595
>gi|24582417|ref|NP_723245.1| CG11266, isoform C [Drosophila melanogaster]
gi|24582419|ref|NP_723246.1| CG11266, isoform D [Drosophila melanogaster]
gi|24582421|ref|NP_723247.1| CG11266, isoform F [Drosophila melanogaster]
gi|24582423|ref|NP_723248.1| CG11266, isoform G [Drosophila melanogaster]
gi|45550943|ref|NP_723244.2| CG11266, isoform E [Drosophila melanogaster]
gi|22945836|gb|AAN10616.1| CG11266, isoform C [Drosophila melanogaster]
gi|22945837|gb|AAN10617.1| CG11266, isoform D [Drosophila melanogaster]
gi|22945838|gb|AAN10618.1| CG11266, isoform F [Drosophila melanogaster]
gi|22945839|gb|AAN10619.1| CG11266, isoform G [Drosophila melanogaster]
gi|45445036|gb|AAN10615.2| CG11266, isoform E [Drosophila melanogaster]
Length = 287
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 30/246 (12%)
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF Y + A
Sbjct: 26 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKA 85
Query: 211 CAALNG-------LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGM 263
LNG +K+G+ T + T S + ++ I A + + + +G+
Sbjct: 86 LEQLNGFELAGRLMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGL 145
Query: 264 NTLGGGMSLFGETLAKVLCLTEAITADALAD---------DEEYE-------EILEDMRE 307
+ T + L + A ++A D E EI +D+ E
Sbjct: 146 AVPQAAANALLATAPQPAPLQQQEVAPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLE 205
Query: 308 ECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
EC K+G ++++ + G V+++ A NAL GR F G + A Y
Sbjct: 206 ECAKHGGVLHIHV-------DTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAY 258
Query: 368 YPEDKY 373
P Y
Sbjct: 259 VPVINY 264
>gi|238569827|ref|XP_002386737.1| hypothetical protein MPER_14917 [Moniliophthora perniciosa FA553]
gi|215439469|gb|EEB87667.1| hypothetical protein MPER_14917 [Moniliophthora perniciosa FA553]
Length = 163
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 34/169 (20%)
Query: 195 GYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSK---TEQESILAQAQQHI 251
G+ F Y D VTD+A +L+G+++GD+ L V+RA+ + I I
Sbjct: 1 GFAFFEYVDANVTDVAIQSLSGMELGDRYLVVQRASVGAKPGTPGMIPNPDIPYDQMPEI 60
Query: 252 AIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGK 311
M SG + A++L + +T D L +D+EY ++ ED++EEC
Sbjct: 61 PRPIMPAGESGGD-------------ARILLMLNMVTPDDLVNDDEYGDLYEDVKEECSS 107
Query: 312 YGTLVNVVIPRPDQNG--------GETP----------GVGKVFLEYYD 342
+G L ++ IPRP + G P GVG+V+++Y D
Sbjct: 108 FGKLEDLRIPRPIKKDKKWAPGELGMDPQAAARADEAAGVGRVYVKYAD 156
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 11 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 70
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 71 NGREFSGRALRV--DNAASEKNKEELKSL 97
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus
kowalevskii]
Length = 220
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 144 GAIGGAEGPDR----VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
A+G + DR VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC
Sbjct: 2 SAVGQSAATDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFC 61
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSK 237
Y+D A L+G ++ + L V A + + +
Sbjct: 62 EYKDQETALSAMRNLSGYELNGRQLRVDNAASEKNKEE 99
>gi|388853962|emb|CCF52460.1| related to Cleavage stimulation factor [Ustilago hordei]
Length = 402
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 151 GPDR----VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP R VFVG +PY +E Q+ ++ G + GF LV DR+TG KGYGFC ++DP
Sbjct: 3 GPQRGSRVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRETGKFKGYGFCEFEDPET 62
Query: 207 TDIACAALNGLKMGDKTLTV 226
A LN +++G + L +
Sbjct: 63 AASAVRNLNEVEVGGRALRI 82
>gi|327284085|ref|XP_003226769.1| PREDICTED: serine/threonine-protein kinase Kist-like [Anolis
carolinensis]
Length = 217
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 280 VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLE 339
VL L + + +EE+E+I++D++EEC KYG +V++ +P+ E PG G VF+E
Sbjct: 120 VLRLLNILNDASFQSEEEFEDIVDDIKEECSKYGQIVSLFVPK------ENPGKGHVFVE 173
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
Y +A A+ AL+G++F V +YP Y
Sbjct: 174 YTNAGDSKAAQQALTGKRFDCKFVVTTFYPLSAY 207
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 109
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 109
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 28/244 (11%)
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
GP R++VG L + TE +K + E FGT+ L+ D +T SKGYGF +++ A
Sbjct: 213 GPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 272
Query: 211 CAALNGLKMGDKTLTVRRATA---SSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLG 267
+NG ++ + L + T SS S + E + + + AL
Sbjct: 273 MEQMNGFELAGRPLKIGPVTERGDSSAYSFLDDEEYEKGGVELNSSARAALMAKLSQGHS 332
Query: 268 GGMSLFG---------ETLAKVLCLTEAITADALAD--DEEYE-------EILEDMREEC 309
G+S+ G + LA + ++ L + D E +I +D+ EEC
Sbjct: 333 AGLSVPGAPPIVSGVQQALATPVAVSLPTPCFMLTNMFDPTKERDAGWDLDIRDDVLEEC 392
Query: 310 GKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYP 369
K+G +V++ + D+N + G V+++ +A +L GR F G + A P
Sbjct: 393 NKFGPIVHIHV---DKNSPQ----GIVYVKCATPDIAISASKSLHGRWFAGKQIIAAPVP 445
Query: 370 EDKY 373
Y
Sbjct: 446 LSNY 449
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E + +L
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLL 105
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 109
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 109
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 138/367 (37%), Gaps = 59/367 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKF---AFVE 86
R R V+ L + + FFS V G V + N K+F A++E
Sbjct: 166 RDMRTVFCMQLSQRIRARDLEEFFSSV---------GKVRDVRLITCNKTKRFKGIAYIE 216
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
R E + A+ L G G+ + V+ LA N+ +
Sbjct: 217 FRDPESVALALGLSGQRLLGIPISVQHTQAEKNRLA------------NIPPPPPPKVIV 264
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
G P R++VG L + TE ++ + E FG + L+ D DTG SKGYGF + +
Sbjct: 265 G----PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADD 320
Query: 207 TDIACAALNGLKMGDKTLTVRRAT--------ASSGQSKTEQESILAQAQQHIAIQKMAL 258
A LNG ++ + + V T AS + ++ I A + +
Sbjct: 321 AKKALEQLNGFELAGRPMKVGNVTERLDVTTHASLDTDEMDRSGIDLGATGRLQLMFKLA 380
Query: 259 QTSGMNTLGGGMSLF---------------GETLAKVLCLTEAITADALADDEEYEEILE 303
+ +G+ +A L + A + ++ +E
Sbjct: 381 EGAGLAVPRAAADALLATAPQPAPNQPVQDSPAIATQCFLLSNMFDPATETNPSWDVEIE 440
Query: 304 D-MREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNT 362
D + EEC K+G +++V + + ++P G V+++ A NAL GR F G
Sbjct: 441 DDVIEECNKHGGVLHVYVDK------QSPA-GNVYVKCPSIATAVLAVNALHGRWFAGRV 493
Query: 363 VNAFYYP 369
+ A Y P
Sbjct: 494 IAAAYVP 500
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E + +L
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLL 105
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 109
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 109
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 109
>gi|241997552|ref|XP_002433425.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215490848|gb|EEC00489.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 466
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILA 245
N + + L V A+S +SK E +++ A
Sbjct: 78 NAFDLNGRPLRV--DNAASEKSKEELKNLQA 106
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 109
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 109
>gi|195452858|ref|XP_002073531.1| GK14167 [Drosophila willistoni]
gi|194169616|gb|EDW84517.1| GK14167 [Drosophila willistoni]
Length = 401
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 19 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 78
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G +TL V A + +S+ E + +L Q
Sbjct: 79 NGYEIGGRTLRV--DNACTEKSRMEMQQLLQGPQ 110
>gi|301781272|ref|XP_002926047.1| PREDICTED: probable RNA-binding protein 23-like isoform 3
[Ailuropoda melanoleuca]
Length = 412
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 131 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 178
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 179 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 221
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 222 NLQKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 281
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V + T
Sbjct: 282 SECARRALEQLNGFELAGRPMRVGQVT 308
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 149 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 196
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 197 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 239
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 240 NLQKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 299
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V + T
Sbjct: 300 SECARRALEQLNGFELAGRPMRVGQVT 326
>gi|90085597|dbj|BAE91539.1| unnamed protein product [Macaca fascicularis]
Length = 295
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G++ F LV DR+TG KGYGFC YQD + A +A+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD---QETALSAM 74
Query: 215 NGLKMGDKTLTVRRATAS 232
L +++T RA AS
Sbjct: 75 RNLNDAPESIT--RAVAS 90
>gi|195037535|ref|XP_001990216.1| GH18352 [Drosophila grimshawi]
gi|193894412|gb|EDV93278.1| GH18352 [Drosophila grimshawi]
Length = 430
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++KE+ G + LV DR++G KG+GFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++G +TL V A + +S+ E + +L
Sbjct: 78 NGYEIGGRTLRV--DNACTEKSRMEMQQLL 105
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 159/396 (40%), Gaps = 80/396 (20%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINH---EKKFAFVE 86
R R V+ L A+E+ I FFS+ AG + V +Y + K A++E
Sbjct: 133 RDTRTVFAYNLSTKADERDIYQFFSK---------AGTVNDVRIIYDRNTPRSKGMAYIE 183
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVR-RPTDYNPTLAAALGPGQPSPNLNLAAVGLAS-- 143
++A+AL G + V V+ + N A Q L + A+G
Sbjct: 184 FADKANITDALALTGQMLRNQVVMVKASEAEKNIAWEAE----QAQKKLEMKALGATDPA 239
Query: 144 ------GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A GP ++ V GL ET +K + E FG + +D TG S+G G
Sbjct: 240 SAAAAVNAQAHGNGPCKLQVHGLDVNIGETDLKAVFEPFGETDFISIQRD-STGRSRGVG 298
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRA-----TASSGQSKT-------EQESILA 245
F Y+ +A + LNGL++ ++L V A T ++ Q+ + EQE +
Sbjct: 299 FVQYKQTQHAVLAISQLNGLELVGQSLKVTMAPIAASTLNAAQAASMVTDKIDEQEGVRL 358
Query: 246 QAQQHIAIQ-KMALQ--TSGMNTLGG-----GMSLFGETLA------------------- 278
++ A+ K+A Q T G GG G+ + E +A
Sbjct: 359 DSRSRAALMAKLAGQDETQGALYSGGIDPKTGLPVSAEEMAAAQRAAHMTEVEFAQGVLG 418
Query: 279 -------KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
+ L L + E + +I ED+++EC K+G + ++ + + +
Sbjct: 419 PASPIPTQCLLLKNMFDPAEETEPEWWIDIGEDVKDECSKHGPVSHIHVDKESR------ 472
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFY 367
G V+L++ G + A+ AL GR F G + A +
Sbjct: 473 --GFVYLKFGSTEGASAARQALHGRWFAGKMIAAEF 506
>gi|449667931|ref|XP_002156035.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Hydra
magnipapillata]
Length = 597
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 166/398 (41%), Gaps = 65/398 (16%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEK 80
++ + Q+A ++AR +YV + P +E I + F + I P + K
Sbjct: 225 IEQILQEARQYAR-IYVSSIHPDLSESDIKSVF-EAFGEILSCKLAP-----DQLTGKHK 277
Query: 81 KFAFVEMRTVEEASNAM-ALDGIIFEGVAVRVRR---PTDYNPTLAAALGPGQPSPNLNL 136
+ F+E A++A+ A++ G +RV R P D+ AL G P P +L
Sbjct: 278 GYGFIEYANQSSANDAIVAMNLFDLGGQYIRVGRAITPPDH------ALKQG-PPPAASL 330
Query: 137 AAVGLASGAIGGAEG-------------------PDRVFVGGLPYY---FTETQIKELLE 174
A + S +I G E PD + +P F+ T
Sbjct: 331 LAANVISASIQGQEAVSAHGATALHMNPVTPSLSPDPFGLPPIPLQIPGFSPT------V 384
Query: 175 SFGTLHGFDLVKDRDTG---NSKGYGFCVYQ-----DPAVTDIACAALNGLKM---GDKT 223
S G+++ + YG Q P + ++LN G++
Sbjct: 385 SNGSVYNIQTSSQAQVSYGQTTLSYGLSTMQSPFSQQPVSYSQSTSSLNNTSYPTPGNQP 444
Query: 224 LTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGET-LAKVLC 282
+ R T+ + K E +Q++ ++ L+ SG + M + + VL
Sbjct: 445 VPEERLTSRQQRKKQELLDHKHAGEQNLEREE-KLEISGKDARYMMMQKLARSGSSPVLV 503
Query: 283 LTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGV-GKVFLEYY 341
L +T+D E EE+ ++ EEC ++G +V VVI + Q + V K+F+E+
Sbjct: 504 LKNMVTSD-----EVDEELQTEVTEECSRFGDVVRVVIYQERQGEEDNAEVIVKIFVEFS 558
Query: 342 DAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
+A++AL+GR FGGN++ A Y EDKY ++DY+
Sbjct: 559 KHSEAESAQSALNGRWFGGNSIQADIYDEDKYKSQDYT 596
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 34 RVYVGGLPPLANEQAIATFFSQV----MTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R Y+G + NE+++ F M + +SA + H K FAFVE
Sbjct: 140 RTYIGSINFQLNEESVRASFLPFGPIKMIDLSWDSAT---------MKH-KGFAFVEYEI 189
Query: 90 VEEASNAM-ALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGG 148
E A A+ ++ ++ G ++V RP+ N+ AA + +
Sbjct: 190 PEAAQLALEQMNNVLMGGRNIKVGRPS-----------------NVPQAAPWIEQ-ILQE 231
Query: 149 AEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTD 208
A R++V + +E+ IK + E+FG + L D+ TG KGYGF Y + + +
Sbjct: 232 ARQYARIYVSSIHPDLSESDIKSVFEAFGEILSCKLAPDQLTGKHKGYGFIEYANQSSAN 291
Query: 209 IACAALNGLKMGDKTLTVRRA 229
A A+N +G + + V RA
Sbjct: 292 DAIVAMNLFDLGGQYIRVGRA 312
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 165 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 212
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 213 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 255
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 256 NLQKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 315
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V + T
Sbjct: 316 SECARRALEQLNGFELAGRPMRVGQVT 342
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILA 245
N + + L V A+S +SK E +++ A
Sbjct: 78 NAFDLNGRPLRVD--NAASEKSKEELKNLQA 106
>gi|71017595|ref|XP_759028.1| hypothetical protein UM02881.1 [Ustilago maydis 521]
gi|46098750|gb|EAK83983.1| hypothetical protein UM02881.1 [Ustilago maydis 521]
Length = 403
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
G G VFVG +PY +E Q+ ++ G + GF LV DR+TG KGYGFC ++DP
Sbjct: 3 GAQRGSRVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRETGKFKGYGFCEFEDPET 62
Query: 207 TDIACAALNGLKMGDKTLTV 226
A LN +++G + L +
Sbjct: 63 AASAVRNLNEVEVGGRPLRI 82
>gi|281343373|gb|EFB18957.1| hypothetical protein PANDA_015655 [Ailuropoda melanoleuca]
Length = 369
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 88 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 135
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 136 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 178
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 179 NLQKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 238
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V + T
Sbjct: 239 SECARRALEQLNGFELAGRPMRVGQVT 265
>gi|302757135|ref|XP_002961991.1| hypothetical protein SELMODRAFT_9008 [Selaginella moellendorffii]
gi|302775356|ref|XP_002971095.1| hypothetical protein SELMODRAFT_9010 [Selaginella moellendorffii]
gi|300161077|gb|EFJ27693.1| hypothetical protein SELMODRAFT_9010 [Selaginella moellendorffii]
gi|300170650|gb|EFJ37251.1| hypothetical protein SELMODRAFT_9008 [Selaginella moellendorffii]
Length = 80
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
++VG LP + + +K L SFG + ++KDR TG SKGYGF + DPA A ++
Sbjct: 6 LYVGYLPATYDDESLKRLFSSFGQIEEVKVIKDRTTGASKGYGFVKFTDPAAASQAVFSM 65
Query: 215 NGLKMGDKTLTVRRA 229
NG K+ DKTL VR A
Sbjct: 66 NGWKIEDKTLAVRIA 80
>gi|345804022|ref|XP_003435135.1| PREDICTED: probable RNA-binding protein 23 [Canis lupus familiaris]
Length = 411
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 130 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 177
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 178 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 220
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 221 NLQKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 280
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 281 SECARRALEQLNGFELAGRPMRVGHVT 307
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY ++ Q+K++ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 28 VFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYGFCEYKDSETAQSAMRNL 87
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESIL 244
NG ++ + L V A + G + +++L
Sbjct: 88 NGTEIHGRQLRVDSAASQKGNGVEDPKALL 117
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 23/218 (10%)
Query: 18 LMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYIN 77
+ PV+ TR AR V+V L A E+ + FFS V + +
Sbjct: 193 ISPVRDDPDADTRDARTVFVMQLSQRAKERELKEFFSSV------GKVRTVKIITDRNSR 246
Query: 78 HEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA 137
K +VE + A+ L+ GV + V+ P+ +A GQ N+ L
Sbjct: 247 RSKGVGYVEYDVADSVPLALGLNNQKLLGVPIIVQ-PSHAEKNRSA----GQ---NVTLQ 298
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
V GP R++VG L Y TE ++ + E FG + L+ D D SKGYG
Sbjct: 299 KVN---------SGPMRLYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYG 349
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQ 235
F + D A LNG ++ + + V T + Q
Sbjct: 350 FITFHDAEDAKRALDQLNGFELAGRPMKVNHVTERNEQ 387
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +KE+ G++ F LV DR+TG KGYGFC Y D A A L
Sbjct: 15 VFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMRNL 74
Query: 215 NGLKMGDKTLTV 226
NG ++ + L V
Sbjct: 75 NGYEINGRNLRV 86
>gi|344298617|ref|XP_003420988.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Loxodonta
africana]
Length = 416
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 132 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 179
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 180 YVEFCEIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRLAA-----------------MAN 222
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L KD DTG+SKGYGF + D
Sbjct: 223 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSD 282
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V AT
Sbjct: 283 SECARRALEQLNGFELAGRPMRVGHAT 309
>gi|124360616|gb|ABN08615.1| hypothetical protein MtrDRAFT_AC157507g26v2 [Medicago truncatula]
Length = 64
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/39 (82%), Positives = 36/39 (92%)
Query: 106 GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASG 144
GVAVRVRRPTDYNP+LAA LGP QPS NLNL+AVGL++G
Sbjct: 26 GVAVRVRRPTDYNPSLAAVLGPCQPSANLNLSAVGLSAG 64
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 148 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 195
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 196 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 238
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 239 NLQKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 298
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 299 SECARRALEQLNGFELAGRPMRVGHVT 325
>gi|73962357|ref|XP_537365.2| PREDICTED: probable RNA-binding protein 23 isoform 1 [Canis lupus
familiaris]
Length = 445
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 164 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 211
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 212 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 254
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 255 NLQKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 314
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 315 SECARRALEQLNGFELAGRPMRVGHVT 341
>gi|344298615|ref|XP_003420987.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Loxodonta
africana]
Length = 450
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 166 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 213
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 214 YVEFCEIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRLAA-----------------MAN 256
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L KD DTG+SKGYGF + D
Sbjct: 257 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSD 316
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V AT
Sbjct: 317 SECARRALEQLNGFELAGRPMRVGHAT 343
>gi|325189600|emb|CCA24085.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 358
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 41/72 (56%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++E+ G + F LV DRD+G KGYGFC Y D A A L
Sbjct: 17 VFVGNIPYDVTEEMLREIFSEAGAVMNFRLVTDRDSGKPKGYGFCEYADGATALSAMRNL 76
Query: 215 NGLKMGDKTLTV 226
NG ++ + L V
Sbjct: 77 NGYEINGRNLRV 88
>gi|344298613|ref|XP_003420986.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Loxodonta
africana]
Length = 434
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 150 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 197
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 198 YVEFCEIQSVPLAIGLTGQWLLGVPIIVQASQAEKNRLAA-----------------MAN 240
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L KD DTG+SKGYGF + D
Sbjct: 241 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSD 300
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V AT
Sbjct: 301 SECARRALEQLNGFELAGRPMRVGHAT 327
>gi|255085602|ref|XP_002505232.1| predicted protein [Micromonas sp. RCC299]
gi|226520501|gb|ACO66490.1| predicted protein [Micromonas sp. RCC299]
Length = 211
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 33/206 (16%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK-----FAFVE 86
A ++YVG LP N + + F + ++V + E++ FAFV
Sbjct: 32 AAKLYVGHLPSTMNAERMLEMFKPFGRVLQ----------IDVIPDRERQLSCKGFAFVL 81
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
T EEA A AL+G + EG ++ VR + P P +N + A
Sbjct: 82 FSTPEEAIAAKALNGHVVEGKSIDVRLKAE----------PRAPREPVNAPVAPVNDDA- 130
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
+++V +P ++ ++K LL+ +G ++ DR+TG S+G+GF D
Sbjct: 131 -------KLYVAYMPDHYRAEELKMLLQPYGLPSDVRVITDRETGRSRGFGFAQMMDEQQ 183
Query: 207 TDIACAALNGLKMGDKTLTVRRATAS 232
A LNG + KTL VR A A
Sbjct: 184 AMAAIQGLNGQMLDGKTLVVRIAGAK 209
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 168 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 215
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 216 YVEFCEIQSVPLAIGLTGQQLLGVPIIVQASQAEKNRLAA-----------------MAN 258
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP +FVG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 259 NLQKGSSGPMHLFVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 318
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V + T
Sbjct: 319 SECARRALEQLNGFELAGRPMKVGQVT 345
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
V VG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A L
Sbjct: 18 VCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESI 243
NG + + L V A+S ++K E +S+
Sbjct: 78 NGREFSGRALRV--DNAASEKNKEELKSL 104
>gi|410961884|ref|XP_003987508.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Felis catus]
Length = 411
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 130 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 177
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 178 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 220
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 221 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 280
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 281 SECARRALEQLNGFELAGRPMRVGHVT 307
>gi|401410983|ref|XP_003884939.1| putative U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Neospora caninum Liverpool]
gi|325119358|emb|CBZ54911.1| putative U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Neospora caninum Liverpool]
Length = 588
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEE 92
R +YVG LPP + F + M A+GG + PG V + + + +AFVE RT+EE
Sbjct: 117 RELYVGNLPPSLEVPQLMEFLNAAMAAVGG-ALLPGPPAVKAWRSTDGHYAFVEFRTMEE 175
Query: 93 ASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
ASN M L+G+ G +R+ RP Y + + P P+ L + +G +GGA
Sbjct: 176 ASNGMQLNGLNCMGFNLRIGRPKTYPQDMNHLIPP--PTIPLLHPQAAMGAGIVGGA 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 32/185 (17%)
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV--YQDPAVTDI 209
P+R+ + LP +E ++++L+E+FG ++ F L+K +D G+ C+ Y D
Sbjct: 313 PERLCILDLPPLMSEEKVRQLVETFGPVNAFHLLK-KDDGSEM---VCIVEYVD------ 362
Query: 210 ACAALNGLKMGDKTLTVRRATASS----GQSKTEQESILAQAQQHIAIQKMALQTSGMNT 265
L+ ++ + + + + + +QE I ++ A Q A
Sbjct: 363 -------LESQEQAMDILHSNSPYRILLAEEAIQQEVIAPFFKKAKAKQMKAEDEEEEEM 415
Query: 266 LGGGMS----LFGETLAKVLCLTEAITADALADDEEYEEILEDMR---EECGKYGTLVNV 318
G MS L + +VL L+ + + L DD+EYEEI+ED+R EECG G +++V
Sbjct: 416 DGEEMSIQALLRPQVCTRVLLLSNIVDVEDLLDDKEYEEIVEDIRLECEECG--GPVLSV 473
Query: 319 VIPRP 323
IPRP
Sbjct: 474 NIPRP 478
>gi|237829727|ref|XP_002364161.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Toxoplasma gondii ME49]
gi|211961825|gb|EEA97020.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Toxoplasma gondii ME49]
gi|221481075|gb|EEE19483.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF, putative
[Toxoplasma gondii GT1]
gi|221507020|gb|EEE32624.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF, putative
[Toxoplasma gondii VEG]
Length = 704
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 78/287 (27%)
Query: 152 PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIAC 211
P+R+ + LP +E ++++L+E+FG ++ F L+K D S+ Y D + A
Sbjct: 302 PERLCILDLPPLMSEEKVRQLVETFGPVNAFHLLKKDD--GSEMVCIVEYVDLESQEQAM 359
Query: 212 AALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQ-KMALQTSGMNTLGGGM 270
L+ + L A +QE I ++ A K + + L G
Sbjct: 360 DILHS-NSPYRILLAEEAI--------QQEVIAPFFKKAKAKHLKTEDEEEEEDDLADGE 410
Query: 271 SLFGETL------AKVLCLTEAITADALADDEEYEEILEDMR---EECGKYGTLVNVVIP 321
+ ++L +VL L+ + + L DD+EYE+I+ED+R EECG G +++V IP
Sbjct: 411 RMNIQSLLRPQVCTRVLLLSNIVEVEDLLDDKEYEDIVEDIRLECEECG--GPVLSVNIP 468
Query: 322 RP----------------------------------DQNGGETPG--------------- 332
RP +Q GE
Sbjct: 469 RPVRGFEHESKPEFQQQQEREALAKKEEVTVKQEVTEQTAGEEDAGEKGRQEKEKAKSSE 528
Query: 333 ------VGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+G ++E+ D A A+ AL+GRKFGG V A Y+ E K+
Sbjct: 529 EQKPATIGFAYVEFEDCEWSAKARKALNGRKFGGKIVEAHYFSEVKF 575
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEE 92
R +YVG LPP + F + M A+GG + PG V + + + +AFVE RT+EE
Sbjct: 113 RELYVGNLPPSLEVPQLMEFLNAAMAAVGG-ALLPGPPAVKAWRSTDGHYAFVEFRTMEE 171
Query: 93 ASNAMALDGIIFEGVAVRVRRPTDY 117
ASN M L+G+ G +R+ RP Y
Sbjct: 172 ASNGMQLNGLNCMGFNLRIGRPKTY 196
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 132 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 179
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 180 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 222
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 223 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 282
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 283 SECARRALEQLNGFELAGRPMRVGHVT 309
>gi|294877868|ref|XP_002768167.1| Nucleolysin TIAR, putative [Perkinsus marinus ATCC 50983]
gi|239870364|gb|EER00885.1| Nucleolysin TIAR, putative [Perkinsus marinus ATCC 50983]
Length = 474
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 33 RRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGP-GDAVV--NVYINHEKKFAFVEMRT 89
++V+VGGLP A++ A+ +FSQ GP D+VV + + + F FV T
Sbjct: 157 KKVFVGGLPREADKPALDEYFSQF---------GPVEDSVVMMDRFTGRSRGFGFVTFET 207
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTD------YNPTLAAALGPGQPSPNLNLAAVGLAS 143
E+ +A + G V VRR + N +A G G P + + + G
Sbjct: 208 KEQMLGCVAAAPHVIMGKTVEVRRSINDDGTSTANERRSAGKGSGAPR-SYDDYSSGKGK 266
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G + P+++FVGGLP T +++ +G L ++ DR TG S+G+G+ Y+D
Sbjct: 267 GGHRD-QNPNKLFVGGLPREVTSDVLRDFFIQYGNLVDCTVITDRMTGQSRGFGYITYED 325
Query: 204 -----PAVTDIACAALNGLKMGDKTLTVRRATASS 233
A+++ A ++G K D T R A S
Sbjct: 326 LAAAEAAISNSANNVIDG-KWVDVKHTTREAPRQS 359
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%)
Query: 141 LASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCV 200
+AS I VFVG +PY TE Q+K++ S G + F LV DR++G KGYGFC
Sbjct: 1 MASATISRERSLRSVFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCE 60
Query: 201 YQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
+QD A L+G ++ ++L V A +
Sbjct: 61 FQDKETALSAMRNLSGYELNGRSLRVDSAAS 91
>gi|344234537|gb|EGV66405.1| hypothetical protein CANTEDRAFT_91566 [Candida tenuis ATCC 10573]
Length = 641
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 16/225 (7%)
Query: 166 ETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ----DP--AVTDIACAALNGLKM 219
E ++++ +E + F +K++ S G F +Q DP A+T + LN L
Sbjct: 413 EDEVRKSIEEHIPIKQFQFLKEKYNKESMGIAFANFQLQSYDPTSAITVVQQVLLN-LTQ 471
Query: 220 GDKTLTVRR--ATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETL 277
G + + S EQ S +A Q + Q ++ + N +
Sbjct: 472 GSSIFSKADFACIVPNQTSIQEQPSNMASLQSFVKNQLISTTVTDNNPNIVSEVVRDNRK 531
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN------GGETP 331
+KV+ + A+T L DDE Y I D+ +E K+G ++ V IPRP + TP
Sbjct: 532 SKVIQIINAVTTKDLKDDETYGFISSDVEQEVKKFGEVIRVKIPRPANDFTPGLTESSTP 591
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNK 376
G+G++F+E+ + A L+GR + TV Y+ D FNK
Sbjct: 592 GLGRIFVEFSNEDSAFKAILGLAGRMYNDRTVLCSYFDVDD-FNK 635
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE +KE+ G++ F LV DR+TG KGYGFC Y D A A L
Sbjct: 15 VFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEYADGATALSAMRNL 74
Query: 215 NGLKMGDKTLTV 226
NG ++ + L V
Sbjct: 75 NGYEINGRNLRV 86
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 150 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 197
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 198 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 240
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 241 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 300
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 301 SECARRALEQLNGFELAGRPMRVGHVT 327
>gi|68481460|ref|XP_715369.1| potential spliceosomal U2AF large subunit [Candida albicans SC5314]
gi|46436988|gb|EAK96342.1| potential spliceosomal U2AF large subunit [Candida albicans SC5314]
gi|238882073|gb|EEQ45711.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 717
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 31/215 (14%)
Query: 169 IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
I+ L ++ G L G ++ + T N G F ++D + D+ L L + R
Sbjct: 522 IESLEKNVGALQGIQFLRQKGTKNLLGLVFVEFKD-SSNDV-IGKLRRLPF------ITR 573
Query: 229 ATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAIT 288
A S IL IQK + + L ++ ++V+ L A+T
Sbjct: 574 AFHSC---------ILPNK---TPIQKGPIDFHSLKNLVENKNVAPHPSSRVIRLLNAVT 621
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGV---------GKVFLE 339
LADD Y I DM E KYG +VNV IPRP +N TPG+ G +++E
Sbjct: 622 ESELADDATYSFIRNDMYNEASKYGEVVNVRIPRPSRN--HTPGILQFNTSTGLGTIYIE 679
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ D A L+G+ + TV A +Y D +
Sbjct: 680 FKDEKIALAAMMELAGKSYNDRTVLATFYDFDDFL 714
>gi|68481591|ref|XP_715304.1| potential spliceosomal U2AF large subunit [Candida albicans SC5314]
gi|46436920|gb|EAK96275.1| potential spliceosomal U2AF large subunit [Candida albicans SC5314]
Length = 719
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 31/215 (14%)
Query: 169 IKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRR 228
I+ L ++ G L G ++ + T N G F ++D + D+ L L + R
Sbjct: 524 IESLEKNVGALQGIQFLRQKGTKNLLGLVFVEFKD-SSNDV-IGKLRRLPF------ITR 575
Query: 229 ATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAIT 288
A S IL IQK + + L ++ ++V+ L A+T
Sbjct: 576 AFHSC---------ILPNK---TPIQKGPIDFHSLKNLVENKNVAPHPSSRVIRLLNAVT 623
Query: 289 ADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGV---------GKVFLE 339
LADD Y I DM E KYG +VNV IPRP +N TPG+ G +++E
Sbjct: 624 ESELADDATYSFIRNDMYNEASKYGEVVNVRIPRPSRN--HTPGILQFNTSTGLGTIYIE 681
Query: 340 YYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ D A L+G+ + TV A +Y D +
Sbjct: 682 FKDEKIALAAMMELAGKSYNDRTVLATFYDFDDFL 716
>gi|30685698|ref|NP_850209.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330253740|gb|AEC08834.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 979
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 7 PFG---ATQLGAFPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGN 63
PF A Q +F V ++TR RR+Y +P A+E+++ F+ M + G N
Sbjct: 853 PFRTPPARQTTSFD----SVQLTESTRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSN 908
Query: 64 SAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAA 123
+ ++ IN EK A VE T ++AS A++LDG F G +++RRP DY T +
Sbjct: 909 HIKGSEPCISCIINKEKSQALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDYVRTTVS 968
Query: 124 AL 125
++
Sbjct: 969 SI 970
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 148 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 195
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 196 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 238
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 239 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 298
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 299 SECARRALEQLNGFELAGRPMRVGHVT 325
>gi|281354415|gb|EFB29999.1| hypothetical protein PANDA_019778 [Ailuropoda melanoleuca]
Length = 568
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 156 FVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALN 215
VG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A LN
Sbjct: 5 IVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 64
Query: 216 GLKMGDKTLTVRRATASSGQSKTEQESI 243
G + + L V A+S ++K E +S+
Sbjct: 65 GREFSGRALRV--DNAASEKNKEELKSL 90
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 166 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 213
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 214 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 256
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 257 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 316
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 317 SECARRALEQLNGFELAGRPMRVGHVT 343
>gi|225711846|gb|ACO11769.1| Cleavage stimulation factor 64 kDa subunit [Lepeophtheirus
salmonis]
Length = 330
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + F LV DR+ G KGYGFC Y+D + A L
Sbjct: 18 VFVGNIPYEATEEKLKDIFSEVGPVTSFKLVYDRENGKPKGYGFCEYKDADMALSAMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQ---SKTEQESIL 244
NG ++ +TL V A + +K E E I+
Sbjct: 78 NGYEIEGRTLRVDNACTEKNRLEMAKGEAEEIV 110
>gi|402875680|ref|XP_003901625.1| PREDICTED: probable RNA-binding protein 23 [Papio anubis]
Length = 497
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 218 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 265
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 266 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 308
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG+SKGYGF + D
Sbjct: 309 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSD 368
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 369 SECARRALEQLNGFELAGRPMRV 391
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 164 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 211
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 212 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 254
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 255 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 314
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 315 SECARRALEQLNGFELAGRPMRV 337
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 238 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 298 SECARRALEQLNGFELAGRPMRVGHVT 324
>gi|256085765|ref|XP_002579083.1| rna recognition motif containing protein [Schistosoma mansoni]
gi|360043212|emb|CCD78624.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 412
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
+FVG +PY TE ++ EL G + GF LV DR++G KGYGFC Y +PA+ A L
Sbjct: 18 IFVGNIPYEATEEKLIELFSKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIAASALRNL 77
Query: 215 NGLKMGDKTLTV 226
++ + L +
Sbjct: 78 QNIEFNGRPLRI 89
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 254 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 314 SECARRALEQLNGFELAGRPMRVGHVT 340
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 238 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 298 SECARRALEQLNGFELAGRPMRV 320
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 254 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 314 SECARRALEQLNGFELAGRPMRV 336
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 238 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 298 SECARRALEQLNGFELAGRPMRV 320
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 254 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 314 SECARRALEQLNGFELAGRPMRV 336
>gi|226466604|emb|CAX69437.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[Schistosoma japonicum]
Length = 414
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
+FVG +PY TE ++ EL G + GF LV DR++G KGYGFC Y +PA+ A L
Sbjct: 18 IFVGNIPYEATEEKLIELFSKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIAASALRNL 77
Query: 215 NGLKMGDKTLTV 226
++ + L +
Sbjct: 78 QNIEFNGRPLRI 89
>gi|302834772|ref|XP_002948948.1| hypothetical protein VOLCADRAFT_89331 [Volvox carteri f.
nagariensis]
gi|300265693|gb|EFJ49883.1| hypothetical protein VOLCADRAFT_89331 [Volvox carteri f.
nagariensis]
Length = 729
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKY--GTLVNVVIPRPDQ----NGGETPG 332
+ C+ + AD L DDEEYE +++D+++EC ++ G +V V +PRP + + G
Sbjct: 544 RFFCVLGMLNADMLLDDEEYEAVIDDLKDECDRHAPGNVVAVKVPRPPEEVRAQTADFIG 603
Query: 333 V---GKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
+ GK F+ + DA A A+ GR F GNTV Y E+++
Sbjct: 604 IGQYGKAFVCFKDATSAQRAHAAIHGRLFAGNTVQVQYITEEEF 647
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 33 RRVYVGGLPPLA-NEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
R +Y+G L P A + A+ F+ + A G + VVNV ++ + ++AFVE RT E
Sbjct: 230 RELYIGNLVPGAVTDVALRQLFNTTLVA-AFPVTGSAEPVVNVNLHSDGRYAFVEFRTPE 288
Query: 92 EASNAMALDG-IIFEGVAVRVRRPTDY 117
A+ A+AL+ + G + V RP+ Y
Sbjct: 289 MATAALALNAQVQLLGQTISVGRPSGY 315
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 238 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 298 SECARRALEQLNGFELAGRPMRV 320
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 88 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 135
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 136 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 178
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 179 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 238
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 239 SECARRALEQLNGFELAGRPMRV 261
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 254 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 314 SECARRALEQLNGFELAGRPMRV 336
>gi|444728803|gb|ELW69245.1| putative RNA-binding protein 23 [Tupaia chinensis]
Length = 450
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 151 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 198
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 199 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 241
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 242 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 301
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 302 SECARRALEQLNGFELAGRPMRVGHVT 328
>gi|213408745|ref|XP_002175143.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
gi|212003190|gb|EEB08850.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
Length = 308
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 38/72 (52%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+ ++ GT+ F LV D +T KGYGFC + DP A L
Sbjct: 9 VFVGNIPYDATEKQMADIFHQIGTVRSFKLVLDPETNQPKGYGFCEFHDPETAASAVRNL 68
Query: 215 NGLKMGDKTLTV 226
N G + L V
Sbjct: 69 NNFPFGARKLRV 80
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 254 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 314 SECARRALEQLNGFELAGRPMRV 336
>gi|395547925|ref|XP_003775192.1| PREDICTED: cleavage stimulation factor subunit 2 [Sarcophilus
harrisii]
Length = 556
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 157 VGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNG 216
VG +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A LNG
Sbjct: 5 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 64
Query: 217 LKMGDKTLTVRRATASSGQSKTEQESI 243
+ + L V A+S ++K E +S+
Sbjct: 65 REFSGRALRV--DNAASEKNKEELKSL 89
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 149/384 (38%), Gaps = 73/384 (19%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKK---FAFVE 86
R AR ++ L + + FFS S G V + H K+ A+VE
Sbjct: 101 RDARTIFCMQLAQRIRVRDLEEFFS---------SVGKVREVKLIQDKHSKRSKGIAYVE 151
Query: 87 MRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAI 146
+ +E A+ L G GV + V+ +AAA L+L L
Sbjct: 152 FKDLESIPLALGLSGQKLLGVPIVVQPTQSEKNKIAAA--------QLSLQKAAL----- 198
Query: 147 GGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAV 206
GP +++VG L TE IK + FG + ++KD D G S+GYGF + +
Sbjct: 199 ----GPTKLYVGSLHENITEEMIKGIFSPFGRVEQVQIIKD-DAGASRGYGFITFAEAEC 253
Query: 207 TDIACAALNGLKMGDKTLTVRRAT----------ASSGQSKTEQESI------------- 243
A LNG ++ K + + + +SG S + +++
Sbjct: 254 AKRALDQLNGFEIAGKPIKLNTVSYGTDMNAMQGLASGPSFLDNDAVERAGIDLGTTGRL 313
Query: 244 --LAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAKVL---CLTEAITADALA 293
+A+ + ++ + AL LG S G T A + C + D L
Sbjct: 314 QLMAKLAEGTGLEVPSAAQQALYLGQSMGLGLPQSAAGTTGAPPIATTCFQLSNMFDPLN 373
Query: 294 D--DEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKN 351
+ +EI +D+ EEC ++G + +V + + + G V+++ A +
Sbjct: 374 ETGSSWDKEIRDDVIEECQRHGAVYHVFVDKQSK--------GNVYVKCDSVSAAANSVA 425
Query: 352 ALSGRKFGGNTVNAFYYPEDKYFN 375
AL GR F GN + A Y P Y +
Sbjct: 426 ALHGRYFAGNMITAAYVPVVNYHS 449
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 148 GAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVT 207
G+ GP R++VG L + TE ++ + E FG + L+KD +TG SKGYGF + D
Sbjct: 139 GSSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLMKDSETGRSKGYGFITFHDAECA 198
Query: 208 DIACAALNGLKMGDKTLTVRRATASS 233
A LNG ++ + + V T S
Sbjct: 199 KKALEQLNGFELAGRPMKVGHVTERS 224
>gi|114652071|ref|XP_522797.2| PREDICTED: probable RNA-binding protein 23 isoform 12 [Pan
troglodytes]
Length = 408
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 129 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 176
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 177 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 219
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG+SKGYGF + D
Sbjct: 220 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSD 279
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 280 SECARRALEQLNGFELAGRPMRVGHVT 306
>gi|156543304|ref|XP_001603981.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Nasonia
vitripennis]
Length = 139
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
+F+GGLPY TE + + +G + +LV+D+DTG KGYGF Y+D T +A L
Sbjct: 36 IFIGGLPYDLTEGDVIAVFSQYGEIVNINLVRDKDTGKQKGYGFLCYEDQRSTILAVDNL 95
Query: 215 NGLKMGDKTLTV 226
NG+K+ +T+ V
Sbjct: 96 NGIKILGRTIRV 107
>gi|150864148|ref|XP_001382862.2| hypothetical protein PICST_42021 [Scheffersomyces stipitis CBS
6054]
gi|149385404|gb|ABN64833.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 533
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 19/218 (8%)
Query: 165 TETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC-VYQDPAVTDIACAALNGLKMGDKT 223
TETQI L + + F + ++ T S G F + DPA K D+
Sbjct: 321 TETQIITELNLYSPVRAFQMFREVGTKVSLGMAFVEFFIDPA----------SYKHTDQV 370
Query: 224 L-TVRRATASSGQSKTEQESILAQAQQH-IAIQKMALQTSGMNTLGGGMSLFGETLAKVL 281
+ ++ QS+ E+ + H +IQ + + L ++ ++V+
Sbjct: 371 IERLQELLQKLDQSQIIDEAFFSCIIPHKTSIQDCQINFDSLKHLVRNENVSTHPKSRVI 430
Query: 282 CLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN------GGETPGVGK 335
L +T L +D Y+ IL+D++ E + GT+V++ IPRP PG+GK
Sbjct: 431 QLLNVVTPKDLVEDSNYQFILKDIKREASRIGTVVSIKIPRPANEFTPGLAQFSVPGLGK 490
Query: 336 VFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKY 373
VF+E+ D A L+GR + V +Y D Y
Sbjct: 491 VFIEFEDEEVAFRAIMELAGRSYNDRCVICAFYNVDDY 528
>gi|255088499|ref|XP_002506172.1| predicted protein [Micromonas sp. RCC299]
gi|226521443|gb|ACO67430.1| predicted protein [Micromonas sp. RCC299]
Length = 628
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 23/243 (9%)
Query: 18 LMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSA------------ 65
L+ +V + T+ ARRV++G + + A + + +
Sbjct: 233 LLHNKVRWRDDTKPARRVHIGNVNAGVKAEEFARVLETRIRTLSPEAVPWHYPLDKRGRV 292
Query: 66 ----GPGDAVV-NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPT 120
PG V+ ++Y+N +K F F+E +E+ +AL+G+ G R RRP DY+P
Sbjct: 293 DERRAPGTRVIEHLYLN-DKGFGFLETTALEDVPAILALNGVRVNGGVTRFRRPKDYDPD 351
Query: 121 LAAALGPGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGL-PYYFTETQIKELLESFGTL 179
+ G + S + + P +VFVGG+ P T+ + E++ SFG L
Sbjct: 352 NNPLVRDGSYRDVFQRVFTAVLSDEV--VDSPTKVFVGGVEPRALTKLDLLEIVSSFGAL 409
Query: 180 HGFDLVKDRDTGNSKGYGFCVYQD-PAVTDIACAALNGLKMGDKTLTVRRATASSGQSKT 238
F D G +G+ + Y + +V A A L+G ++ K + AT + ++T
Sbjct: 410 TAFRCETD-GAGLCRGFAWMEYAEGESVAAKAVAGLSGYQLRGKPIAAALATPRAEAART 468
Query: 239 EQE 241
E
Sbjct: 469 RGE 471
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 112/267 (41%), Gaps = 55/267 (20%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 78 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 137
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R ASS S T
Sbjct: 138 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 197
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLG--GGMSLFGETLAKVLCLTE------ 285
+ ++A+ + +Q + ALQ SG G S + ++ TE
Sbjct: 198 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 257
Query: 286 -------AITADALAD------DEEY---EEILEDMREECGKYGTLVNVVIPRPDQNGGE 329
A L++ +EE EI +D+ EEC K+G ++++ + D+N +
Sbjct: 258 AASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYV---DKNSAQ 314
Query: 330 TPGVGKVFLEYYDAVGCATAKNALSGR 356
G V+++ A NAL GR
Sbjct: 315 ----GNVYVKCPSIAAAIAAVNALHGR 337
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q+K++ G + F LV DR++G KGYGF YQD + L
Sbjct: 18 VFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKETALSSMRNL 77
Query: 215 NGLKMGDKTLTVRRATASSGQS 236
NG ++ + L V AT+ ++
Sbjct: 78 NGRELHGRPLRVDHATSERNRN 99
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG + Y E Q+K++ G + LV DR+TG KGYGFC Y DP + A L
Sbjct: 25 VFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYGFCEYNDPQTAESAIRNL 84
Query: 215 NGLKMGDKTLTVRRA 229
NG ++ + L V A
Sbjct: 85 NGYELNGRQLRVDSA 99
>gi|321460847|gb|EFX71885.1| hypothetical protein DAPPUDRAFT_93311 [Daphnia pulex]
Length = 81
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY +E Q+K + G + F +V+DR+TG S+G+GFC +Q P A L
Sbjct: 4 VFVGNIPYGVSEDQLKAIFSEAGPVVSFRIVQDRETGRSRGFGFCEFQSPDSAQTAMRNL 63
Query: 215 NGLKMGDKTLTV 226
NG ++ ++L V
Sbjct: 64 NGYELNGRSLRV 75
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 165 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 212
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 213 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 255
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 256 NLQKGTGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 315
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + +
Sbjct: 316 SECARRALEQLNGFELAGRPMRI 338
>gi|328850276|gb|EGF99443.1| hypothetical protein MELLADRAFT_31912 [Melampsora larici-populina
98AG31]
Length = 79
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 292 LADDEEYEEILEDMREECGKYGTLVNVVIPRPDQN---------GGETPGVGKVFLEYYD 342
L DDEEY+EILED+ EEC KY + +V IPRP +N G+GKVF+++
Sbjct: 2 LVDDEEYKEILEDIIEECSKYVKIEDVKIPRPKKNQKGRIHSKASESVEGLGKVFIKFEQ 61
Query: 343 AVGCATAKNALSGRKFG 359
C A +A++GR+F
Sbjct: 62 IEDCGQALSAIAGRQFA 78
>gi|294905728|ref|XP_002777665.1| Splicing factor U2AF 65 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239885556|gb|EER09481.1| Splicing factor U2AF 65 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 680
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 55/314 (17%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVE 91
AR +Y+G +PP + + + + +G N A PG +V+ ++ + FAFVE RT E
Sbjct: 241 ARELYIGQIPPGISAAELIDVLNDGLMNMGAN-AMPGRPIVHGWLGGDGLFAFVEFRTPE 299
Query: 92 EASNAMA-LDGIIFE--GVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS----- 143
EAS A+ L+G + GV+++V RP Y +GP P ++N G A+
Sbjct: 300 EASIALERLNGHQLKSYGVSIKVGRPKGY-------MGPAAPDDSVNAYTAGHAATSSTT 352
Query: 144 -GAIGGAE---GPDRVFVGGLPYYFTETQIKELLE--SFGTLHGFDLVKDRDTGNSKGYG 197
G I AE R+ + G P +E IK L S G + +L+K T N +
Sbjct: 353 PGGISAAEVSSDTSRLCLIGFPLKASEHSIKRALRNASKGEIRHLELLK--HTWNDEEIV 410
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMA 257
V++ C + + K + E + + I K A
Sbjct: 411 MAVFE--------CVNIE----------------DEHRLKKKGEVEVQGVKARIINPKDA 446
Query: 258 LQTSGMNTLGGGM-SLFGETL--AKVLCLTE-AITADALADDEEYEEILEDMREECGKY- 312
+ MN G M G + +++L +T A + + L DD Y ++++D++ EC
Sbjct: 447 IVKGYMNFDGDIMKKAMGLEIVPSRILVMTNFAGSVEELLDDINYSDLMDDIKVECKSIT 506
Query: 313 --GTLVNVVIPRPD 324
+ +++IPRP+
Sbjct: 507 AGADVRSIIIPRPE 520
>gi|410218750|gb|JAA06594.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307726|gb|JAA32463.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG+SKGYGF + D
Sbjct: 238 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 298 SECARRALEQLNGFELAGRPMRVGHVT 324
>gi|410261840|gb|JAA18886.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349769|gb|JAA41488.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349773|gb|JAA41490.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG+SKGYGF + D
Sbjct: 238 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 298 SECARRALEQLNGFELAGRPMRVGHVT 324
>gi|114652069|ref|XP_001159523.1| PREDICTED: probable RNA-binding protein 23 isoform 11 [Pan
troglodytes]
Length = 426
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG+SKGYGF + D
Sbjct: 238 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 298 SECARRALEQLNGFELAGRPMRVGHVT 324
>gi|358254188|dbj|GAA54213.1| cleavage stimulation factor subunit 2 [Clonorchis sinensis]
Length = 437
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
+FVG +PY TE ++ EL G + GF LV DR++G KGYGFC Y +PA+ A L
Sbjct: 23 IFVGNIPYEATEEKLIELFGKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIAASALRNL 82
Query: 215 NGLKMGDKTLTV 226
++ + L +
Sbjct: 83 QNIEFNGRPLRI 94
>gi|303272315|ref|XP_003055519.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463493|gb|EEH60771.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 394
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 113/285 (39%), Gaps = 62/285 (21%)
Query: 106 GVAVRVRRPTDYNPTLAAALGPGQPSPNLNL----------------------AAVGLAS 143
G R+RRP+ + T ++ PG LNL A V AS
Sbjct: 126 GYVPRIRRPSKHGITQPSS-APGASDAALNLVDPAERQRQAQQWILQQQAGSLARVQEAS 184
Query: 144 G-AIGGAEGPDRVFVGGLPYYFTETQIKELLE-----SFGTLHGFDL--VKDRDTGNSKG 195
A+GG +FVG + T+ + L + +F D V + G+
Sbjct: 185 TVALGGPRKNREIFVGNIDAVVTKQALTALFDDALAVAFPNATSGDAKPVVNIQLGDQAT 244
Query: 196 YGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQK 255
YGF + A A LNGL + LT+ R T + + A A++
Sbjct: 245 YGFVELLSEELATAAIAGLNGLVFCGRPLTIARPTGWVDPAAAATITARAAAER------ 298
Query: 256 MALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTL 315
GE + ++CL+ +T LAD+E Y E+L D+R EC K G +
Sbjct: 299 ------------------GEEHSTIVCLSNIVTESDLADEEAYAELLADVRTECAKCGEV 340
Query: 316 VNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGG 360
++ IPR GG VG VF++ D G + ++GR+F G
Sbjct: 341 KDIRIPR----GGP---VGSVFVKMGDESGANKVQTEMAGRRFDG 378
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVM-TAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 88
R R ++VG + + +QA+ F + A ++G VVN+ + + + FVE+
Sbjct: 192 RKNREIFVGNIDAVVTKQALTALFDDALAVAFPNATSGDAKPVVNIQLGDQATYGFVELL 251
Query: 89 TVEEASNAMA-LDGIIFEGVAVRVRRPTDY 117
+ E A+ A+A L+G++F G + + RPT +
Sbjct: 252 SEELATAAIAGLNGLVFCGRPLTIARPTGW 281
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 84/207 (40%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 129 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 176
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 177 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 219
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 220 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 279
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 280 SECARRALEQLNGFELAGRPMRVGHVT 306
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 129 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 176
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 177 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 219
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 220 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 279
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 280 SECARRALEQLNGFELAGRPMRV 302
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 129 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 176
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 177 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 219
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 220 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 279
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 280 SECARRALEQLNGFELAGRPMRV 302
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 173 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 220
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 221 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 263
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 264 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 323
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 324 SECARRALEQLNGFELAGRPMRV 346
>gi|426376374|ref|XP_004054976.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Gorilla
gorilla gorilla]
Length = 403
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 84/207 (40%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 129 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 176
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 177 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 219
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 220 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 279
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 280 SECARRALEQLNGFELAGRPMRVGHVT 306
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG+SKGYGF + D
Sbjct: 254 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 314 SECARRALEQLNGFELAGRPMRVGHVT 340
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG+SKGYGF + D
Sbjct: 254 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 314 SECARRALEQLNGFELAGRPMRVGHVT 340
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG+SKGYGF + D
Sbjct: 254 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 314 SECARRALEQLNGFELAGRPMRVGHVT 340
>gi|221044666|dbj|BAH14010.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 78 HEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA 137
K A+VE ++ A+ L G GV + V+ LAA
Sbjct: 35 RSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-------------- 80
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
+A+ G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYG
Sbjct: 81 ---MANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYG 137
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
F + D A LNG ++ + + V T
Sbjct: 138 FITFSDSECARRALEQLNGFELAGRPMRVGHVT 170
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ A+ +P+ +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQ---------ASQAEKNRPA--------AMAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 238 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 298 SECARRALEQLNGFELAGRPMRVGHVT 324
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 100/252 (39%), Gaps = 60/252 (23%)
Query: 32 ARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVV---NVYINHEKKFAFVEMR 88
A R+YVG L +E+ I T FS GP +V + K FAFVE
Sbjct: 250 ACRIYVGSLNFELSEEDIKTAFSPF---------GPVKSVSLTKDPLTQRSKGFAFVEYA 300
Query: 89 TVEEASNAMA-LDGIIFEGVAVRVRRP------------------------TDYNPTLAA 123
+ A+ A+ ++G + G ++V RP NP+L
Sbjct: 301 YPDAATAALKHMNGFMLAGRQLKVGRPHTPGAGLPGMPGMPGVMMPGLSPFPQLNPSLPV 360
Query: 124 ALGPG----------------------QPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLP 161
+ P QP+P + L A +R++VG +
Sbjct: 361 -MNPSILLQANAAIEAQKAAAAAANGSQPTPEMMQEFTKLTGKTAADATASNRIYVGSIH 419
Query: 162 YYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGD 221
+ T IK + E+FGT+ L+ + +TG KGYGF Y++ + A +NG +G
Sbjct: 420 WDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQQMNGWDLGG 479
Query: 222 KTLTVRRATASS 233
+ + V RA +S+
Sbjct: 480 RPIKVGRAISSA 491
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 236 SKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADD 295
S E ++ Q++ +QK+A T+ GG S + + +A
Sbjct: 567 SHEENLTLSTPNQRYALMQKLA-----RGTITGGKS------------SRCVVLKDMAGP 609
Query: 296 EEYEEILE-DMREECGKYGTLVNVVIPRPDQNGGETPG--VGKVFLEYYDAVGCATAKNA 352
E+ ++ LE ++ +E KYG + VVI + Q+ E PG + K+F+ + A A +
Sbjct: 610 EDVDDELEGEITDEATKYGIVERVVIYQERQS--EKPGDVIIKIFILFQSADQAQKALTS 667
Query: 353 LSGRKFGGNTVNAFYYPEDKYFNKDYS 379
L+GR FGG + A +Y E K+ +DYS
Sbjct: 668 LNGRWFGGRQIKAAFYDEKKFLAEDYS 694
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 90/241 (37%), Gaps = 39/241 (16%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
R++VG L + +E IK FG + L KD T SKG+ F Y P A
Sbjct: 252 RIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKH 311
Query: 214 LNGLKMGDKTLTVRRATAS---------------SGQSKTEQ---------ESILAQAQQ 249
+NG + + L V R G S Q SIL QA
Sbjct: 312 MNGFMLAGRQLKVGRPHTPGAGLPGMPGMPGVMMPGLSPFPQLNPSLPVMNPSILLQANA 371
Query: 250 HIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADDE------EYEEILE 303
I QK A + G E + + LT ADA A + ++ +
Sbjct: 372 AIEAQKAAAAAA------NGSQPTPEMMQEFTKLTGKTAADATASNRIYVGSIHWDLTSD 425
Query: 304 DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTV 363
D++ +GT+ + V+ P+ G+ G G F+EY ++ A ++G GG +
Sbjct: 426 DIKTVFEAFGTVKSCVL-MPNPETGKHKGYG--FVEYEESKSAEEAIQQMNGWDLGGRPI 482
Query: 364 N 364
Sbjct: 483 K 483
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 129 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 176
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 177 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 219
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 220 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 279
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 280 SECARRALEQLNGFELAGRPMRV 302
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 235 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 294
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS 236
F + D A LNG ++ + + V R ASS S
Sbjct: 295 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASS 337
>gi|119586631|gb|EAW66227.1| RNA binding motif protein 23, isoform CRA_f [Homo sapiens]
Length = 269
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 78 HEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLA 137
K A+VE ++ A+ L G GV + V+ LAA
Sbjct: 35 RSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-------------- 80
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
+A+ G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYG
Sbjct: 81 ---MANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYG 137
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
F + D A LNG ++ + + V T
Sbjct: 138 FITFSDSECARRALEQLNGFELAGRPMRVGHVT 170
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 87/221 (39%), Gaps = 28/221 (12%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 141 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 193
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 194 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 236
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 237 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 296
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS 236
+ D A LNG ++ + + V R ASS S
Sbjct: 297 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASS 337
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 87/221 (39%), Gaps = 28/221 (12%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 21 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 73
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 74 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 116
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 117 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 176
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS 236
+ D A LNG ++ + + V R ASS S
Sbjct: 177 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASS 217
>gi|291403539|ref|XP_002718108.1| PREDICTED: RNA binding motif protein 23 isoform 1 [Oryctolagus
cuniculus]
Length = 410
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
K A+VE ++ A+ L G GV + V+ LAA
Sbjct: 172 RRSKGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQAEKNRLAA------------- 218
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
+A+ G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGY
Sbjct: 219 ----MANNLQKGSGGPLRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGY 274
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
GF + D A LNG ++ + + V T
Sbjct: 275 GFITFSDSECGRRALEQLNGFELAGRPMRVGHVT 308
>gi|21591633|gb|AAM64164.1|AF515695_1 cleavage stimulation factor 64 [Arabidopsis thaliana]
Length = 461
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q++E+ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQES 242
++ + L V A G KT +S
Sbjct: 71 QSYEINGRQLRVDFAENDKGTDKTRDQS 98
>gi|126277401|ref|XP_001369188.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Monodelphis
domestica]
Length = 415
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 139 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 186
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 187 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 229
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKG+GF + D
Sbjct: 230 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSD 289
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 290 SECARRALEQLNGFELAGRPMRVGHVT 316
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A +A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 235 AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 294
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS 236
F + D A LNG ++ + + V R ASS S
Sbjct: 295 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASS 337
>gi|22330574|ref|NP_177325.2| cleavage stimulating factor 64 [Arabidopsis thaliana]
gi|7239507|gb|AAF43233.1|AC012654_17 Contains similarity to the polyadenylation factor 64 kDa subunit
from Xenopus laevis gb|U17394; It contains RNA
recognition motif PF|00076. ESTs gb|AI993960 and T42211
come from this gene [Arabidopsis thaliana]
gi|110738120|dbj|BAF00992.1| cleavage stimulation factor like protein [Arabidopsis thaliana]
gi|332197113|gb|AEE35234.1| cleavage stimulating factor 64 [Arabidopsis thaliana]
Length = 461
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q++E+ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQES 242
++ + L V A G KT +S
Sbjct: 71 QSYEINGRQLRVDFAENDKGTDKTRDQS 98
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 207 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 254
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 255 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 297
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 298 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 357
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 358 SECARRALEQLNGFELAGRPMRV 380
>gi|343427636|emb|CBQ71163.1| related to HRP1-subunit of cleavage factor I [Sporisorium reilianum
SRZ2]
Length = 588
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 34 RVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEA 93
++++GGL E ++ +FSQ G + + + FAF+ +
Sbjct: 168 KMFIGGLNWDTTEDSLRRYFSQF------GEVGHCTVMRDNMTGRSRGFAFLNFVNPKAV 221
Query: 94 SNAMA----LDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
+ + LDG + + R D N G GQ S N N G G +
Sbjct: 222 NTVVVREHYLDGKVIDPKRAIPRPQRDSNFNAHHNGGQGQASYNNNGGGAGGGGGYNAQS 281
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
+ ++FVGGLP T + E FGTL + DR+TGN +G+GF YQD A
Sbjct: 282 Q---KLFVGGLPASVTPASFRMFFEQFGTLAECTCMMDRETGNPRGFGFLTYQDDAALQH 338
Query: 210 ACAALNGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLG 267
+ L K + V+RA QSK + +S+ + QQ I +MA+ GM G
Sbjct: 339 VLSTRP-LVFDGKEVDVKRA-----QSKNDPQSLQIRRQQRIDNPEMAMGGMGMQQPG 390
>gi|291403543|ref|XP_002718110.1| PREDICTED: RNA binding motif protein 23 isoform 3 [Oryctolagus
cuniculus]
Length = 428
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
K A+VE ++ A+ L G GV + V+ LAA
Sbjct: 190 RRSKGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQAEKNRLAA------------- 236
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
+A+ G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGY
Sbjct: 237 ----MANNLQKGSGGPLRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGY 292
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
GF + D A LNG ++ + + V T
Sbjct: 293 GFITFSDSECGRRALEQLNGFELAGRPMRVGHVT 326
>gi|291403541|ref|XP_002718109.1| PREDICTED: RNA binding motif protein 23 isoform 2 [Oryctolagus
cuniculus]
Length = 444
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 77 NHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
K A+VE ++ A+ L G GV + V+ LAA
Sbjct: 206 RRSKGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQAEKNRLAA------------- 252
Query: 137 AAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGY 196
+A+ G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKGY
Sbjct: 253 ----MANNLQKGSGGPLRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGY 308
Query: 197 GFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
GF + D A LNG ++ + + V T
Sbjct: 309 GFITFSDSECGRRALEQLNGFELAGRPMRVGHVT 342
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 84/207 (40%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 162 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 209
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 210 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 252
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 253 NLQKGTGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 312
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 313 SECARRAMDQLNGFELAGRPMRVGHVT 339
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 238 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 298 SECARRALEQLNGFELAGRPMRV 320
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 191 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 238
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 239 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 281
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 282 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 341
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 342 SECARRALEQLNGFELAGRPMRV 364
>gi|320582580|gb|EFW96797.1| splicing factor u2af large subunit [Ogataea parapolymorpha DL-1]
Length = 281
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 159 GLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGF--CVYQDPAVTDIACAALNG 216
+PY ++ ELL+ G + V D+ + SKG F V +D V LN
Sbjct: 75 NVPYGTPREKLLELLQPLGKVRSLAQVLDKLSYESKGVAFFEMVSEDSEV----LTKLNE 130
Query: 217 LKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGET 276
L + D+ L + RA + + K EQ IL+ A+Q +
Sbjct: 131 LAIDDQELQIFRA-CENPERKYEQAVILSAETLFGALQSDKISPHAP------------- 176
Query: 277 LAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPD---QNGGET-PG 332
++++ + + L D +Y +I EC +G V+IPRP+ + G T P
Sbjct: 177 -SEIVQFLNCVAVEDLVDSVKYNDIKVAFEAECSCHGHPEKVLIPRPEGDFRPGMPTKPE 235
Query: 333 VGKVFLEYYDAVGCATAKNALSGRKFGGNTV-NAFYYPED 371
VG++F+++ + AL+GRKF G T+ AFY ED
Sbjct: 236 VGRIFVKFATSEEAQKCAEALAGRKFNGRTILAAFYETED 275
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 238 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 298 SECARRALEQLNGFELAGRPMRV 320
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 238 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 298 SECARRALEQLNGFELAGRPMRV 320
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 84/207 (40%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 147 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 194
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 195 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 237
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 238 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 297
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 298 SECARRALEQLNGFELAGRPMRVGHVT 324
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 254 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 314 SECARRALEQLNGFELAGRPMRV 336
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRT 89
R R V+ L + + FFS A+G +++ K A+VE +
Sbjct: 40 RDMRTVFCMQLSQRIRARDLEEFFS----AVG--KVRDVRLIMDNKTRRSKGIAYVEFQD 93
Query: 90 VEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGA 149
VE AM L+G G+ + V+ PT A + + + ++ L G IG
Sbjct: 94 VESVPLAMGLNGQKLFGIPIVVQ------PTQAER--NRAAAQSASTSSSTLQRGNIG-- 143
Query: 150 EGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDI 209
P R++VG L + TE +K + E FG + +L+KD +T SKGYGF + D
Sbjct: 144 --PMRLYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKK 201
Query: 210 ACAALNGLKMGDKTLTVRRATASS 233
A LNG ++ + + V T +
Sbjct: 202 ALEQLNGFELAGRPMKVGHVTERT 225
>gi|430812117|emb|CCJ30453.1| unnamed protein product [Pneumocystis jirovecii]
Length = 258
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY +E Q+K++ G ++ F LV D++T KGYGFC Y D A A L
Sbjct: 10 VFVGNIPYDVSEEQLKDIFRQIGPINRFRLVFDKETNKPKGYGFCEYPDVATASAAVRNL 69
Query: 215 NGLKMGDKTLTVRRATASSGQ--SKTEQES 242
N + + L V A + Q ++ +Q+S
Sbjct: 70 NNHDINGRQLRVDFAESDPAQDNNRRQQQS 99
>gi|255724230|ref|XP_002547044.1| predicted protein [Candida tropicalis MYA-3404]
gi|240134935|gb|EER34489.1| predicted protein [Candida tropicalis MYA-3404]
Length = 700
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 278 AKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNG-------GET 330
+KV+ L A+T L+D E Y+ D+ E KYG + VVIPRP + +
Sbjct: 593 SKVIRLLNAVTERELSDVETYKFTKNDIYREASKYGVVEQVVIPRPIRGRTPGILKLNRS 652
Query: 331 PGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
PG+G VF+EY D TA LSGR + TV A ++ D Y
Sbjct: 653 PGMGSVFIEYKDEKTALTAMMELSGRTYNDRTVLATFFDYDDYL 696
>gi|170054071|ref|XP_001862961.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
gi|167874431|gb|EDS37814.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
Length = 400
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + LV DR++G KGYGFC Y+D A L
Sbjct: 17 VFVGNIPYEATEEKLKDIFSEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 76
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G + L V A + +S+ E ++L Q
Sbjct: 77 NGYEIGGRALRV--DNACTEKSRMEMAALLQGPQ 108
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 254 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 314 SECARRALEQLNGFELAGRPMRV 336
>gi|71896483|ref|NP_001025497.1| ELAV-like protein 3 [Xenopus (Silurana) tropicalis]
gi|123913100|sp|Q28FX0.1|ELAV3_XENTR RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|89266725|emb|CAJ83874.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Xenopus (Silurana) tropicalis]
Length = 343
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAE-GPDRVFVGGLPYYFTETQIKELLESFGTLHG 181
A+ GPG +VG+ +G G A+ + V LP T+ + K L S G +
Sbjct: 13 ASNGPG---------SVGILNGTNGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIES 63
Query: 182 FDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASSGQ------ 235
LV+D+ TG S GYGF Y DP D A LNGLK+ KT+ V A SS
Sbjct: 64 CKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANL 123
Query: 236 ---------SKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETL 277
++ E E + +Q + I + + Q +G + G G F + +
Sbjct: 124 YVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRI 174
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 86/221 (38%), Gaps = 29/221 (13%)
Query: 35 VYVGGLPPLANEQAIATFFSQ----------VMTAIGGNSAGPGDAVVNVYI-------- 76
+YV LP N++ + FSQ V G S G G + I
Sbjct: 123 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKG 182
Query: 77 -NHEKKFAFVEMRTVEEASN-----AMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQP 130
N +K E TV+ A+N AL +++ A R P ++ T P
Sbjct: 183 LNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQTTARRYTGPL-HHQTQRFRFSPITI 241
Query: 131 SPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
NLA V L G +FV L E+ + +L FG + +++D T
Sbjct: 242 DSVTNLAGVSLTGPTTAGW----CIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTT 297
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
KG+GF + +A A+LNG ++GD+ L V T+
Sbjct: 298 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTS 338
>gi|298248970|ref|ZP_06972774.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297546974|gb|EFH80841.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 104
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
R++VGGLPY TE + +L E G + ++ DR+TG SKG+GF T A
Sbjct: 2 RIYVGGLPYQSTEQDLIQLFEQIGQVTSATVITDRETGRSKGFGFVEMSSDDETRAAIEQ 61
Query: 214 LNGLKMGDKTLTVRRA 229
LNG +GD+T+TV A
Sbjct: 62 LNGSTLGDRTITVNEA 77
>gi|221129809|ref|XP_002164481.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Hydra
magnipapillata]
Length = 255
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
+F+GGLPY TE + + +G + +LV+D+ TG KGYGF Y+D T +A
Sbjct: 39 IFIGGLPYDLTEGDVLAVFSQYGEIVNINLVRDKKTGKFKGYGFLCYEDQRSTILAVDNF 98
Query: 215 NGLKMGDKTLTV 226
NG+K+G +T+ V
Sbjct: 99 NGIKLGGRTIRV 110
>gi|19114796|ref|NP_593884.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|74698319|sp|Q9P6P7.1|YKCG_SCHPO RecName: Full=Uncharacterized RNA-binding protein C644.16
gi|7708595|emb|CAB90143.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 422
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
V+VG +PY E Q+ ++ + G + F LV D ++G KGYGFC Y DPA A L
Sbjct: 7 VYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAASAVRNL 66
Query: 215 NGLKMGDKTLTVRRATA 231
N G + L V TA
Sbjct: 67 NNYDAGTRRLRVDFPTA 83
>gi|443898802|dbj|GAC76136.1| mRNA cleavage and polyadenylation factor I complex, subunit RNA15
[Pseudozyma antarctica T-34]
Length = 401
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 157 VGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNG 216
VG +PY +E Q+ ++ G + GF LV DRDTG KGYGFC ++DP A LN
Sbjct: 14 VGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRDTGKFKGYGFCEFEDPETAASAVRNLNE 73
Query: 217 LKMGDKTLTVRRA 229
+++G + L + A
Sbjct: 74 VEVGGRPLRISFA 86
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 87/221 (39%), Gaps = 28/221 (12%)
Query: 20 PVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYINHE 79
P+ +T + R AR V+ L + + FFS V + +
Sbjct: 124 PIDNLTPE-ERDARTVFCMQLAARIRPRDLEEFFSTV------GKVRDVRMISDRNSRRS 176
Query: 80 KKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAV 139
K A+VE V A+ L G GV + V Q S A
Sbjct: 177 KGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV-----------------QASQAEKNRAA 219
Query: 140 GLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFC 199
+A+ G+ GP R++VG L + TE ++ + E FG + L+ D +TG SKGYGF
Sbjct: 220 AMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 279
Query: 200 VYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS 236
+ D A LNG ++ + + V R ASS S
Sbjct: 280 TFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASS 320
>gi|10880789|gb|AAG24388.1|AF275678_1 PP239 protein [Homo sapiens]
Length = 418
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 141 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 188
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 189 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 231
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 232 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 291
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 292 SECARRALEQLNGFELAGRPMRV 314
>gi|341882558|gb|EGT38493.1| hypothetical protein CAEBREN_09163 [Caenorhabditis brenneri]
Length = 757
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
Query: 272 LFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
L + V+ L +T D D +EY E ++REECGK+GT+++VVI +
Sbjct: 659 LMRTNRSSVIVLRNMVTPD---DIDEYLE--GEIREECGKFGTVLDVVIA-----NFASS 708
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
GV K+F++Y D++ AK AL GR FGGN+V A Y + + + DY+
Sbjct: 709 GVVKIFVKYADSMQVDRAKAALDGRFFGGNSVKAEAYDQILFDHADYT 756
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
R++VG + + E +++ + FG + ++ D TG+ K + F Y+ P +A +
Sbjct: 103 RIYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQES 162
Query: 214 LNGLKMGDKTLTV 226
+NG +G + L V
Sbjct: 163 MNGQMLGGRNLKV 175
>gi|326431687|gb|EGD77257.1| hypothetical protein PTSG_08350 [Salpingoeca sp. ATCC 50818]
Length = 397
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
P V+VG +PY TE ++ + + G + F L+ D++TG SKG+GFC + D A + A
Sbjct: 3 APTSVWVGNIPYEATEEELIKFFSAVGDVKNFHLITDQNTGRSKGFGFCYFLDAAAAESA 62
Query: 211 CAALNGLKMGDKTLTVRRATASS 233
L+G + D+ L V AT S
Sbjct: 63 VRNLSGQPLRDRPLRVDLATPRS 85
>gi|126277398|ref|XP_001369153.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Monodelphis
domestica]
Length = 433
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 157 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 204
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 205 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 247
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKG+GF + D
Sbjct: 248 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSD 307
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 308 SECARRALEQLNGFELAGRPMRVGHVT 334
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G GP R++VG L + TE ++ + E FG + L+KD DTG SKGYGF + D
Sbjct: 254 NLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 313
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 314 SECARRALEQLNGFELAGRPMRV 336
>gi|395503034|ref|XP_003755878.1| PREDICTED: probable RNA-binding protein 23 [Sarcophilus harrisii]
Length = 451
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 175 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 222
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 223 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 265
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKG+GF + D
Sbjct: 266 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSD 325
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 326 SECARRALEQLNGFELAGRPMRVGHVT 352
>gi|126277396|ref|XP_001369125.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Monodelphis
domestica]
Length = 449
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS A+G V +V I K A
Sbjct: 173 RDARTVFCMQLAARIRPRDLEDFFS----AVG--------KVRDVRIISDRNSRRSKGIA 220
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 221 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAA-----------------MAN 263
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD DTG SKG+GF + D
Sbjct: 264 NLQKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSD 323
Query: 204 PAVTDIACAALNGLKMGDKTLTVRRAT 230
A LNG ++ + + V T
Sbjct: 324 SECARRALEQLNGFELAGRPMRVGHVT 350
>gi|91085985|ref|XP_972080.1| PREDICTED: similar to CG10466 CG10466-PA [Tribolium castaneum]
gi|270010180|gb|EFA06628.1| hypothetical protein TcasGA2_TC009547 [Tribolium castaneum]
Length = 266
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VF+GGLP+ TE I + +G + +L++D+D+G SKG+ F Y+D TD+A
Sbjct: 36 VFIGGLPFDLTEGDIICIFSQYGEVVNINLIRDKDSGKSKGFCFLCYEDQRSTDLAVDNF 95
Query: 215 NGLKMGDKTLTV 226
NG+K+ ++T+ V
Sbjct: 96 NGIKILNRTIRV 107
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 20/216 (9%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVY---IN 77
V+V Q +++VG LP + A+A F + AG + V +Y
Sbjct: 75 VEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFER---------AGNVEMVEVIYDKLTG 125
Query: 78 HEKKFAFVEMRTVEEASNA-MALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
+ F FV M T EE A +G +G A+RV ++ G G+ N +
Sbjct: 126 RSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGG-NSSY 184
Query: 137 AAVGLASGAIGGAEG------PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+ + GGA G +RV+VG L + + +KEL G + +V DRD+
Sbjct: 185 GGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDS 244
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV 226
G S+G+GF Y + A +LNG+ + +++ V
Sbjct: 245 GRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRV 280
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 106/293 (36%), Gaps = 58/293 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A LA+ G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 234 AAALANNLQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 293
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R AS+ S T
Sbjct: 294 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASNASSFLDSDELERTGIDLGTT 353
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSLFGETLAK-------------- 279
+ ++A+ + +Q + ALQ SG G L +
Sbjct: 354 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRISQQSEALAAAAAAASAA 413
Query: 280 ----------VLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGG- 328
+ T+ I + ED E G + VI +++GG
Sbjct: 414 SITLASATLPIPATTQPIATQCFQLSNMFNPQTED---ELGWDSEIKEDVIEECNKHGGV 470
Query: 329 ------ETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
+ G V+++ A NAL GR F G + A Y P Y +
Sbjct: 471 VHLYVDKNSAQGNVYVKCPTIASAIAAVNALHGRWFAGKMITAAYVPLPTYHS 523
>gi|291400895|ref|XP_002716702.1| PREDICTED: RNA binding motif protein, X-linked 2 [Oryctolagus
cuniculus]
Length = 198
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVGGLPY TE I + +G + LV+D+ TG S+G+GF Y+D T +A
Sbjct: 37 VFVGGLPYELTEGDILCVFSQYGEIVNIHLVRDKKTGKSRGFGFICYEDQRSTVLAVDNF 96
Query: 215 NGLKMGDKTLTVRRAT 230
NG+K+ +T+ V A+
Sbjct: 97 NGIKIKGRTIRVDHAS 112
>gi|395329428|gb|EJF61815.1| hypothetical protein DICSQDRAFT_154995 [Dichomitus squalens
LYAD-421 SS1]
Length = 374
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY E Q+ ++ +S G + G LV DRDTG KGYGFC + D A L
Sbjct: 5 VFVGNVPYNMAEDQLIDVFKSVGQVVGLRLVFDRDTGKPKGYGFCEFADHETAASAVRNL 64
Query: 215 NGLKMGDKTLTV 226
NG ++G + L +
Sbjct: 65 NGYEIGGRPLRI 76
>gi|170095009|ref|XP_001878725.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646029|gb|EDR10275.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 332
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY E Q+ ++ +S G + GF L DRDTG KGYGFC + D A L
Sbjct: 7 VFVGNVPYNMAEDQLIDVFKSVGQVIGFRLSYDRDTGKPKGYGFCEFADHETAMSAVRNL 66
Query: 215 NGLKMGDKTLTVRRATA 231
NG+ +G + L + A +
Sbjct: 67 NGVDVGGRPLRIDLAES 83
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG + Y E Q+K++ G + LV DRDTG KGYGFC Y D + A L
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAESAIRNL 87
Query: 215 NGLKMGDKTLTVRRA 229
NG ++ + L V A
Sbjct: 88 NGFELNGRPLRVDSA 102
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 106/291 (36%), Gaps = 56/291 (19%)
Query: 138 AVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYG 197
A LA+ G GP R++VG L + TE ++ + E FG + L+ D +TG SKGYG
Sbjct: 208 AAALANNLQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 267
Query: 198 FCVYQDPAVTDIACAALNGLKMGDKTLTV----RRATASSGQS---------------KT 238
F + D A LNG ++ + + V R AS+ S T
Sbjct: 268 FITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASNASSFLDSDELERTGIDLGTT 327
Query: 239 EQESILAQAQQHIAIQ-----KMALQTSGMNTLGGGMSL--------------------- 272
+ ++A+ + +Q + ALQ SG G L
Sbjct: 328 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRISQQSEALAAAAASAATI 387
Query: 273 -FGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGG--- 328
++ T+ I + ED E G + V+ +++GG
Sbjct: 388 SLAQSPLPTPATTQPIATQCFQLSNMFNPQTED---ELGWDSEIKEDVMEECNKHGGAIH 444
Query: 329 ----ETPGVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFN 375
+ G V+++ A NAL GR F G + A Y P Y +
Sbjct: 445 IYVDKNSPQGNVYVKCSTITSAIAAVNALHGRWFAGKMITAAYVPVPTYHS 495
>gi|17510025|ref|NP_491176.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
gi|373220165|emb|CCD72565.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
Length = 749
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Query: 296 EEYEEILE-DMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFLEYYDAVGCATAKNALS 354
++ +E LE ++REECGKYG +++VVI + G+ K+F++Y D++ AK AL
Sbjct: 669 QDIDEFLEGEIREECGKYGNVIDVVI-----ANFASSGLVKIFVKYSDSMQVDRAKAALD 723
Query: 355 GRKFGGNTVNAFYYPEDKYFNKDYS 379
GR FGGNTV A Y + + + DY+
Sbjct: 724 GRFFGGNTVKAEAYDQILFDHADYT 748
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
R++VG + + E ++ + FG + ++ D TG+ K + F Y+ P +A +
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 214 LNGLKMGDKTLTV 226
+NG +G + L V
Sbjct: 163 MNGQMLGGRNLKV 175
>gi|359321052|ref|XP_848710.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Canis
lupus familiaris]
Length = 560
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 17 PLMPVQVMTQQATRHAR---RVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVV- 72
PL+P+Q M Q R RVYVG + E I F+ GP ++
Sbjct: 111 PLLPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPF---------GPIKSIDM 161
Query: 73 ---NVYINHEKKFAFVEMRTVEEASNAM-ALDGIIFEGVAVRVRRPTDYNPTLAAALGPG 128
+V + H K FAFVE E A A+ ++ ++ G ++V RP++ G
Sbjct: 162 SWDSVTMKH-KGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNI----------G 210
Query: 129 QPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDR 188
Q P ++ A A +R++V + ++ IK + E+FG + L +D
Sbjct: 211 QAQPIIDQLA--------EEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDP 262
Query: 189 DTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRAT 230
TG KGYGF Y+ + A +++N +G + L V +A
Sbjct: 263 TTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAV 304
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 236 SKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADALADD 295
S+ E SI + +H+ +QK L + + V+ L + + DD
Sbjct: 436 SEQEHMSISGSSARHMVMQK----------------LLRKQESTVMVLRNMVDPKDIDDD 479
Query: 296 EEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPG--VGKVFLEYYDAVGCATAKNAL 353
E E + EECGK+G VN VI ++ G E + K+F+E+ A A AL
Sbjct: 480 LEGE-----VTEECGKFGA-VNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQAL 533
Query: 354 SGRKFGGNTVNAFYYPEDKYFNKDYSA 380
+GR F G V A Y ++++ N D SA
Sbjct: 534 NGRWFAGRKVVAEVYDQERFDNSDLSA 560
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 36 YVGGLPPLANEQAIATFF-SQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEAS 94
++G LP A E + FF SQ ++A+ + + +K F ++E + +
Sbjct: 183 FIGNLPWSAEEDTVKQFFESQGVSAVYAVRL-----ITDRDTGRKKGFGYIET-SASDVD 236
Query: 95 NAMALDGIIFEGVAVRV----RRPTDYNPTLAAALGPGQPSPNLNLAAVGLASGAIGGAE 150
+AL+G FEG ++V RP + + P Q G A
Sbjct: 237 AVLALNGADFEGRELKVDKANERPANADRDTKPRDAPRQS----------------GEAA 280
Query: 151 GPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIA 210
VF+G L + TE I LE FGT+ +V DR+T +G+G+C ++D + A
Sbjct: 281 TDGNVFLGNLSFNSTEDSIWAALEQFGTVKAVRIVYDRETQRPRGFGYCEFEDADTANKA 340
Query: 211 CAALNGLKMGDKTLTVRRATASS 233
AA + + + + + ATA S
Sbjct: 341 IAASGTVDVDGRQIRIDTATARS 363
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG + Y E Q+K++ G + LV DRDTG KGYGFC Y D + A L
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 215 NGLKMGDKTLTVRRA 229
NG ++ + L V A
Sbjct: 88 NGFELNGRPLRVDSA 102
>gi|134026264|gb|AAI36135.1| ELAV (embryonic lethal, abnormal vision)-like 3 (Hu antigen C)
[Xenopus (Silurana) tropicalis]
Length = 342
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 123 AALGPGQPSPNLNLAAVGLASGAIGGAE-GPDRVFVGGLPYYFTETQIKELLESFGTLHG 181
A+ GPG +VG+ +G G A+ + V LP T+ + K L S G +
Sbjct: 13 ASNGPG---------SVGILNGTNGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIES 63
Query: 182 FDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASS 233
LV+D+ TG S GYGF Y DP D A LNGLK+ KT+ V A SS
Sbjct: 64 CKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSS 115
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 88/220 (40%), Gaps = 28/220 (12%)
Query: 35 VYVGGLPPLANEQAIATFFSQ---------VMTAIGGNSAGPGDAVVNVYI--------- 76
+YV LP N++ + FSQ ++ + G S G G + I
Sbjct: 123 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 182
Query: 77 NHEKKFAFVEMRTVEEASN-----AMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPS 131
N +K E TV+ A+N AL +++ A R P ++ T P
Sbjct: 183 NGQKPLGASEPITVKFANNPSQKTGQALLTHLYQTTARRYTGPL-HHQTQRFRFSPITID 241
Query: 132 PNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTG 191
NLA V L G +FV L E+ + +L FG + +++D T
Sbjct: 242 SVTNLAGVSLTGPTTAGW----CIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTN 297
Query: 192 NSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
KG+GF + +A A+LNG ++GD+ L V T+
Sbjct: 298 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTS 337
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 23/216 (10%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
++V LP + ++++L +G + ++ D+ TG S+G GF + + A L
Sbjct: 123 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 182
Query: 215 NGLK-MG-DKTLTVRRATASSGQSKTEQESILAQAQQ-------HIAIQKMALQTSGMNT 265
NG K +G + +TV+ A S ++ + L Q H Q+ +++
Sbjct: 183 NGQKPLGASEPITVKFANNPSQKTGQALLTHLYQTTARRYTGPLHHQTQRFRFSPITIDS 242
Query: 266 LG--GGMSLFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRP 323
+ G+SL G T A ++ +A DE + + G +G + NV + R
Sbjct: 243 VTNLAGVSLTGPTTAGWCIFVYNLSPEA---DESV------LWQLFGPFGAVTNVKVIR- 292
Query: 324 DQNGGETPGVGKVFLEYYDAVGCATAKNALSGRKFG 359
D + G G V + YD A A +L+G + G
Sbjct: 293 DFTTNKCKGFGFVTMTNYDEAAMAIA--SLNGYRLG 326
>gi|452823773|gb|EME30781.1| mRNA splicing factor, putative isoform 1 [Galdieria sulphuraria]
Length = 291
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG + Y +E Q++E+L G + F +V DR+TG KGY FC Y D + A L
Sbjct: 7 VFVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAIRNL 66
Query: 215 NGLKMGDKTLTVRRATASS---GQSKTEQESILAQAQQHIAIQKMALQTS-------GMN 264
NG ++ +TL V A + GQS E+ ++ AL TS G++
Sbjct: 67 NGTELNGRTLRVDLADSDKRELGQSAANMETGNNNPSTASNMKAGALNTSGGTGNIQGLS 126
Query: 265 TLGGGMSLFGETLAKVLCLTEAITADALADDEEYEEIL 302
LG SL + ++ + + A A + E+ ++L
Sbjct: 127 NLGAKGSLEQLSCQQIHEIMLQMKALAQQNPEQVRQLL 164
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 20/216 (9%)
Query: 21 VQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYIN--- 77
V+V Q +++VG LP + A+A F + AG + V +Y
Sbjct: 76 VEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFER---------AGNVEIVEVIYDKLSG 126
Query: 78 HEKKFAFVEMRTVEEASNA-MALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNL 136
+ F FV M T EE A +G +G A+RV ++ G G+ N +
Sbjct: 127 RSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGG-NSSY 185
Query: 137 AAVGLASGAIGGAEG------PDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
+ + GGA G +RV+VG L + + +KEL G + +V DRD+
Sbjct: 186 GGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDS 245
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV 226
G S+G+GF Y + A +LNG+ + +++ V
Sbjct: 246 GRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRV 281
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 35/203 (17%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI------NHEKKFA 83
R AR V+ L + + FFS AIG V +V I K A
Sbjct: 163 RDARTVFCMQLAARIRPRDLEDFFS----AIG--------KVHDVRIISDRNSRRSKGIA 210
Query: 84 FVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPNLNLAAVGLAS 143
+VE ++ A+ L G GV + V+ LAA +A+
Sbjct: 211 YVEFCDIQSVPLAIGLTGQRLLGVPIVVQASQAEKNRLAA-----------------MAN 253
Query: 144 GAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQD 203
G+ GP R++VG L + TE ++ + E FG + L+KD +TG+SKGYGF + +
Sbjct: 254 NLQKGSGGPKRLYVGCLHFNITEDMLRGIFEPFGKIENIVLMKDSETGHSKGYGFITFSE 313
Query: 204 PAVTDIACAALNGLKMGDKTLTV 226
A LNG ++ + + V
Sbjct: 314 SECARRAVEQLNGFELAGRPMRV 336
>gi|341895702|gb|EGT51637.1| CBN-RNP-6 protein [Caenorhabditis brenneri]
Length = 757
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Query: 272 LFGETLAKVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETP 331
L + V+ L +T D D +EY E ++REECGK+GT+++VVI +
Sbjct: 659 LMRTNRSSVIVLRNMVTPD---DIDEYLE--GEIREECGKFGTVLDVVIA-----NFASS 708
Query: 332 GVGKVFLEYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYFNKDYS 379
GV K+F++Y D++ AK AL GR FGGN V A Y + + + DY+
Sbjct: 709 GVVKIFVKYADSMQVDRAKAALDGRFFGGNIVKAEAYDQILFDHADYT 756
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 154 RVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAA 213
R++VG + + E +++ + FG + ++ D TG+ K + F Y+ P +A +
Sbjct: 103 RIYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQES 162
Query: 214 LNGLKMGDKTLTV 226
+NG +G + L V
Sbjct: 163 MNGQMLGGRNLKV 175
>gi|297839015|ref|XP_002887389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333230|gb|EFH63648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 460
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE Q++E+ G + F LV DR+TG KGYGFC Y+D A L
Sbjct: 10 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 69
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQE----------SILAQAQQHI 251
++ + L V A G KT + S++ ++Q+ I
Sbjct: 70 QSYEINGRQLRVDFAENDKGTDKTRDQGQGGPGLPSTSVMTESQKQI 116
>gi|345328415|ref|XP_001513073.2| PREDICTED: cleavage stimulation factor subunit 2-like
[Ornithorhynchus anatinus]
Length = 1036
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 157 VGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNG 216
+G +PY TE Q+K++ G + F LV DR+TG KGYGFC YQD A LNG
Sbjct: 456 LGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 515
Query: 217 LKMGDKTLTVRRATASSGQSKTEQESI 243
+ + L V A+S ++K E +S+
Sbjct: 516 REFSGRALRV--DNAASEKNKEELKSL 540
>gi|157137809|ref|XP_001664044.1| RNA-binding protein [Aedes aegypti]
gi|108869641|gb|EAT33866.1| AAEL013869-PA [Aedes aegypti]
Length = 399
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +PY TE ++K++ G + LV DR++G KGYGFC Y+D A L
Sbjct: 16 VFVGNIPYEATEEKLKDIFCEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 75
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQ 248
NG ++G + L V A + +S+ E ++L Q
Sbjct: 76 NGYEIGGRALRV--DNACTEKSRMEMAALLQGPQ 107
>gi|50553814|ref|XP_504318.1| YALI0E23628p [Yarrowia lipolytica]
gi|49650187|emb|CAG79917.1| YALI0E23628p [Yarrowia lipolytica CLIB122]
Length = 621
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 30 RHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAV--VNVYINHEKKFAFVEM 87
R R VYV + P + FF++ AGP V V + + AFVE
Sbjct: 327 RDKRTVYVQQVAPHVQSTELFDFFAE---------AGPVHDVSLVKDRSSRCRGVAFVEF 377
Query: 88 RTVEEASNAMALDGIIFEGVAVRVR-----RPTDYNPTLAAALGPGQPSPNLNLAAVGLA 142
VE S A+ L G G A+ +R R + + A+ G S + +A V +
Sbjct: 378 EDVESVSRAIGLTGRSLHGQALLIRCTDSARNREEQQSEASFNSSGAGSTHA-VANVNAS 436
Query: 143 SGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQ 202
+ AI R++VG + + TE +I ++ E+FG + DL K++ TG SKGY F Y
Sbjct: 437 TSAIDSVRF-HRLYVGNIYFGVTEGEIIQIFEAFGPIEFADLQKEK-TGKSKGYCFIQYV 494
Query: 203 DPAVTDIACAALNGLKMGDKTLTV 226
+P A +NG ++ + L V
Sbjct: 495 NPDDAKTALEKMNGFELAGRKLRV 518
>gi|194911931|ref|XP_001982402.1| GG12756 [Drosophila erecta]
gi|190648078|gb|EDV45371.1| GG12756 [Drosophila erecta]
Length = 466
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 132 PNLN-LAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDT 190
PN N A G +G+ G +E + V LP TE +I+ L S G + L++D+
Sbjct: 123 PNTNGNAGSGSQNGSNGSSETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQ 182
Query: 191 GNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATASS 233
G S GYGF Y P + A LNGL++ +KT+ V A SS
Sbjct: 183 GQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSS 225
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
+F+ L E + +L FG + +VKD T KGYGF + +A AL
Sbjct: 387 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 446
Query: 215 NGLKMGDKTLTVRRAT 230
NG MG++ L V T
Sbjct: 447 NGYTMGNRVLQVSFKT 462
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 16 FPLMPVQVMTQQATRHARRVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVY 75
F +P+ +T + R R V+ L + + FFS S G V +
Sbjct: 150 FSKLPIDDLTPEE-RDQRTVFCMQLSQRIRGRDLEEFFS---------SVGKVRDVKLIT 199
Query: 76 INHEKKF---AFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP 132
N ++F A+VE + E AM L G G+ + V+ PT A G +
Sbjct: 200 CNKTRRFKGIAYVEFKDPESVPLAMGLTGQKLLGIPISVQ------PTQAEKNRQGNSTA 253
Query: 133 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 192
+ + + GP R++VG L + TE ++ + E FG + L+ D +TG
Sbjct: 254 PMMMPS---------DMRGPMRLYVGSLHFNITEDMLRGIFEPFGKIDSIQLIMDPETGR 304
Query: 193 SKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTV 226
SKGYGF + A LNG ++ + + V
Sbjct: 305 SKGYGFITFHSADDAKKALEQLNGFELAGRPMKV 338
>gi|351697169|gb|EHB00088.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 180
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 155 VFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAAL 214
VFVG +P+ +E Q++++ G + F V DR+TG KGYGFC YQD A L
Sbjct: 18 VFVGNIPHEASEEQLRDIFSEVGPVVSFRWVYDRETGKPKGYGFCEYQDQETALSAMQHL 77
Query: 215 NGLKMGDKTLTVRRATASSGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSL 272
NG + + L V S+ K ++ L A+ + L TS + ++ G + L
Sbjct: 78 NGHEFSGRALRVD----SAASEKNKELKCLGTGMTASAVAALILMTSSIVSVVGSLYL 131
>gi|67624203|ref|XP_668384.1| RNA-binding protein SiahBP [Cryptosporidium hominis TU502]
gi|54659576|gb|EAL38146.1| RNA-binding protein SiahBP [Cryptosporidium hominis]
Length = 615
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 41/226 (18%)
Query: 34 RVYVGGLPPLANEQAIATFFSQVMTAIGGNSAGPGDAVVNVYI----NHEKKFAFVEMRT 89
R+YVG L NE + F S GP +VN+ + N K F F+E +
Sbjct: 213 RIYVGSLDYSLNEADLKQVFG---------SFGP---IVNIDMPREGNRSKGFCFIEYTS 260
Query: 90 VEEASNAMA-LDGIIFEGVAVRVRRPTD----------------------YNPTLAAALG 126
E A A+A ++ + +G +RV RPT+ NP +A
Sbjct: 261 QESAEMALATMNRFVLKGRPIRVGRPTNAASSNGNQSGSGGIGGGGSGNVINPNIAVFNN 320
Query: 127 PGQPSPNLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVK 186
N + + I +R+++G +PY FT ++ + ++FG + L+
Sbjct: 321 NHITHQNHQIQSETTHGTGIA-THSQNRIYIGSVPYSFTTDDLRHIFKTFGVILSCQLIP 379
Query: 187 D-RDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVRRATA 231
G +GYGF + +A +NG ++G K L V ATA
Sbjct: 380 SIEKPGTHRGYGFIEFGTADQAKLAIETMNGFEVGGKQLKVNVATA 425
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 279 KVLCLTEAITADALADDEEYEEILEDMREECGKYGTLVNVVIPRPDQNGGETPGVGKVFL 338
++ LT + D + D E+ E+++ EC KYG + +V I N + ++F+
Sbjct: 520 NIILLTNMVGPDEIDD-----ELKEEVKIECSKYGKVYDVRI-HVSNNISKPSDRVRIFV 573
Query: 339 EYYDAVGCATAKNALSGRKFGGNTVNAFYYPEDKYF 374
+ A AL+ R FGGN V Y ++Y+
Sbjct: 574 VFESPSMAQIAVPALNNRWFGGNQVFCSLYNTERYY 609
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,164,055,800
Number of Sequences: 23463169
Number of extensions: 267146283
Number of successful extensions: 738092
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11154
Number of HSP's successfully gapped in prelim test: 4757
Number of HSP's that attempted gapping in prelim test: 704401
Number of HSP's gapped (non-prelim): 32875
length of query: 380
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 236
effective length of database: 8,980,499,031
effective search space: 2119397771316
effective search space used: 2119397771316
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)