Your job contains 1 sequence.
>016940
MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS
KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLQGIRIIQAAAGAGRTMLISDAGQVYAFG
KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR
LGHHTEPNDVEPHPLLGTLENIPVVQIAAGYCYLLALACQPSGMAVYSVGCGLGGKLGHG
SRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES
VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLS
IFQYLQIWLNLSSYRHLPTF
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016940
(380 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 1304 4.8e-133 1
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 310 2.1e-27 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 253 5.2e-23 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 253 5.4e-23 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 257 5.6e-23 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 257 5.6e-23 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 256 7.6e-23 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 256 7.8e-23 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 255 8.2e-23 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 261 3.0e-22 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 261 3.0e-22 2
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 265 1.3e-21 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 263 2.1e-21 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 263 2.1e-21 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 261 3.4e-21 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 259 4.4e-21 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 257 9.1e-21 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 256 1.2e-20 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 256 1.2e-20 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 255 1.5e-20 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 255 1.5e-20 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 252 3.1e-20 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 251 4.0e-20 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 250 5.1e-20 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 256 5.4e-20 1
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 256 5.4e-20 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 186 7.7e-20 2
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 247 1.1e-19 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 240 1.2e-19 3
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 244 2.2e-19 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 242 3.4e-19 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 242 3.6e-19 1
ZFIN|ZDB-GENE-040426-2213 - symbol:rcc2 "regulator of chr... 190 2.8e-18 2
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 187 3.9e-18 2
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 166 1.0e-17 2
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 184 1.2e-17 2
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 187 5.5e-17 2
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 157 2.5e-16 2
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 183 4.1e-16 2
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 185 5.7e-16 2
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 166 8.8e-16 2
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 181 1.8e-15 2
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 155 2.0e-15 2
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 218 4.4e-15 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 208 2.6e-14 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 171 3.4e-14 2
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 210 4.2e-14 1
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 203 6.4e-14 2
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 151 6.6e-14 2
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 142 8.3e-14 2
UNIPROTKB|F1MD33 - symbol:F1MD33 "Uncharacterized protein... 122 1.0e-13 2
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 159 1.1e-13 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 155 1.2e-13 2
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 183 1.5e-13 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 203 3.4e-13 1
ZFIN|ZDB-GENE-040426-2216 - symbol:rcc1 "regulator of chr... 135 1.7e-12 2
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 196 1.9e-12 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 154 2.2e-12 2
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 159 2.4e-12 2
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 194 3.0e-12 1
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 128 3.4e-12 2
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 135 3.7e-12 2
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 134 4.8e-12 2
DICTYBASE|DDB_G0284187 - symbol:Dd5P2 "inositol 5-phospha... 130 7.5e-12 2
UNIPROTKB|F1NZF2 - symbol:MYCBP2 "Uncharacterized protein... 139 8.4e-12 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 141 8.4e-12 2
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 190 8.6e-12 1
RGD|1307187 - symbol:Nek9 "NIMA-related kinase 9" species... 162 9.6e-12 2
MGI|MGI:2387995 - symbol:Nek9 "NIMA (never in mitosis gen... 162 9.8e-12 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 189 1.2e-11 1
UNIPROTKB|E2QYP0 - symbol:NEK9 "Uncharacterized protein" ... 161 1.2e-11 2
UNIPROTKB|Q8TD19 - symbol:NEK9 "Serine/threonine-protein ... 161 1.3e-11 2
RGD|1312048 - symbol:Mycbp2 "MYC binding protein 2, E3 ub... 132 1.3e-11 2
UNIPROTKB|F1S2Q4 - symbol:NEK9 "Uncharacterized protein" ... 161 1.3e-11 2
UNIPROTKB|F1RP77 - symbol:MYCBP2 "Uncharacterized protein... 136 1.4e-11 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 204 1.5e-11 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 204 1.5e-11 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 204 1.5e-11 2
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 204 1.5e-11 2
UNIPROTKB|F1PB36 - symbol:MYCBP2 "Uncharacterized protein... 136 1.5e-11 2
UNIPROTKB|O75592 - symbol:MYCBP2 "Probable E3 ubiquitin-p... 136 1.5e-11 2
UNIPROTKB|J3KPZ3 - symbol:MYCBP2 "Probable E3 ubiquitin-p... 136 1.5e-11 2
UNIPROTKB|J9PB77 - symbol:MYCBP2 "Uncharacterized protein... 136 1.5e-11 2
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 187 1.9e-11 1
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 203 1.9e-11 2
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 182 2.3e-11 1
UNIPROTKB|C9J3R0 - symbol:RCC1 "Regulator of chromosome c... 129 2.5e-11 2
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 176 2.8e-11 2
MGI|MGI:2179432 - symbol:Mycbp2 "MYC binding protein 2" s... 138 3.0e-11 2
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 135 3.1e-11 2
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 171 3.1e-11 2
UNIPROTKB|E1BH40 - symbol:MYCBP2 "Uncharacterized protein... 136 3.8e-11 2
UNIPROTKB|D4A2D3 - symbol:Mycbp2 "Protein Mycbp2" species... 132 4.3e-11 2
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 133 4.4e-11 2
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 187 5.6e-11 2
UNIPROTKB|A7Z018 - symbol:RCC1 "Uncharacterized protein" ... 131 7.1e-11 2
UNIPROTKB|P23800 - symbol:RCC1 "Regulator of chromosome c... 130 7.2e-11 2
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 130 7.2e-11 2
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 130 7.4e-11 2
UNIPROTKB|F1NAG9 - symbol:NEK9 "Uncharacterized protein" ... 157 7.6e-11 2
WARNING: Descriptions of 94 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 1304 (464.1 bits), Expect = 4.8e-133, P = 4.8e-133
Identities = 248/352 (70%), Positives = 275/352 (78%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPGHSIAVTS 60
MC KR IFKPM E ERQ++K++CGGSWKLVLRFLLAGEACCRRE SQA+AGPGHS+AVTS
Sbjct: 101 MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSVAVTS 160
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFG 120
KG VY+FG N+SGQLGHG TE+E R +P+RSL TMLISD G+VYA G
Sbjct: 161 KGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACG 220
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR 180
K+SFGEAEYG QGTK VT+PQLV SLKNIFVVQAAIGN+FTAVLSREG+VYTFSWGND R
Sbjct: 221 KESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 280
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXX 240
LGH TE DVEP PLLG LEN+PVVQI QP+GM+VYSV
Sbjct: 281 LGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHG 340
Query: 241 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 300
SRTDEK+PR+IEQFQ+LNLQP GQDGRVCTWGWGRYGCLGHGNEECES
Sbjct: 341 SRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECES 400
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQ 352
VPKVV+ L+ VKA+HVATGDYTTFVVS+DGDVYSFGCGESASLGH+ D Q
Sbjct: 401 VPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQ 452
Score = 164 (62.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 72/320 (22%), Positives = 123/320 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT--TEEEWRPRPIRSLXXXXXXXXXXXX 104
QA AG ++ ++ G VY+ G S G+ +G T+ P+ + SL
Sbjct: 199 QAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGN 258
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++S G+VY F + G + + + P L+ L+N+ VVQ A G + L
Sbjct: 259 YFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRP-LLGPLENVPVVQIAAGYCYLLAL 317
Query: 165 SREGR---VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQP 221
+ + VY+ G +LGH + ++ P +E ++ +
Sbjct: 318 ACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPR----VIEQFQILNLQPRVVAAGAWHAAV 373
Query: 222 SGM--AVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR 279
G V + + E P+++E L +++ DG
Sbjct: 374 VGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEG--LSHVKAVHVATGDYTTFVVSDDGD 431
Query: 280 VCTWGWGRYGCLGH-------GNEECESV-PKVVQALNDVKA----IHVATGDYT---TF 324
V ++G G LGH GN + P VV +L V I + Y TF
Sbjct: 432 VYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTF 491
Query: 325 VVSEDGDVYSFGCGESASLG 344
++E G +++FG G+ LG
Sbjct: 492 ALTESGKLFAFGAGDQGQLG 511
Score = 145 (56.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 47/155 (30%), Positives = 68/155 (43%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG H+ V G V ++G G LGHG E E P+ + L T +
Sbjct: 366 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFV 425
Query: 110 ISDAGQVYAFG---KDSFGE-AEYGVQGTKL--VTSPQLVESLKNIF--VVQAAIGNFF- 160
+SD G VY+FG S G + QG + V SP +V SLK + +VQ ++ N
Sbjct: 426 VSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIY 485
Query: 161 ----TAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
T L+ G+++ F G+ +LG N E
Sbjct: 486 WNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKE 520
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 310 (114.2 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 105/352 (29%), Positives = 151/352 (42%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRR-ENSQA---IA-GPGHS 55
+C ++ M +++L C G+WK + FL + E E SQ IA G H+
Sbjct: 64 LCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGKYHT 123
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+ + + V YS G + SG L HG+ T + PI + + +G
Sbjct: 124 LLINNSKV-YSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSG 182
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
QV G +S + + ++ + P+LVE+LK Q A G FT LSREG YT
Sbjct: 183 QVLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCG 241
Query: 175 WGNDARLGHHTEPNDVEPHP-LLGTLENI-PVVQIXXXXXXXXXXXXQPSGMAVYSVXXX 232
+LGH + D P P ++ L+ I PVVQI S VYS
Sbjct: 242 SNTHGQLGHG-DTLD-RPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGS---VYSFGSG 296
Query: 233 XXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLG 292
+ DE PR+I+ F+ + +GRV TWG G G LG
Sbjct: 297 SNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALG 356
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
HG+E + P+V+ LN+ A+ V TFV+ E G +Y FG SLG
Sbjct: 357 HGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLG 408
Score = 241 (89.9 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 78/309 (25%), Positives = 135/309 (43%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLXXXXXXXXXXXX 104
+Q A HS V G V + G NSS GH T+ +RP+ + +L
Sbjct: 166 AQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGL 225
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGNFFTAV 163
T+ +S G Y G ++ G+ +G + V P++VE LK I VVQ A G +
Sbjct: 226 HFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPV--PKVVEFLKTIGPVVQIAAGPSYVLA 283
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG-TLENIPVVQIXXXXXXXXXXXXQPS 222
++++G VY+F G++ LGH + ++++P + + I ++++ S
Sbjct: 284 VTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALD---S 340
Query: 223 GMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCT 282
VY+ D+ P+++ L N + G +
Sbjct: 341 NGRVYTWGKGYCGALGHGDENDKITPQVL--VNLNNCLAVQVCARKRKTFVLVEGGLLYG 398
Query: 283 WGWGRYGCLG---HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+GW +G LG G + P+V++ L + V+TG Y T VV++ G ++ FG E
Sbjct: 399 FGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNE 458
Query: 340 SASLGHNAI 348
A LGH+++
Sbjct: 459 RAQLGHDSL 467
Score = 180 (68.4 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 43/144 (29%), Positives = 72/144 (50%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG H++A+ S G VY++G G LGHG ++ P+ + +L T +
Sbjct: 330 AGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFV 389
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ + G +Y FG FG + +G V P+++E LK V Q + G + T V+++ G
Sbjct: 390 LVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRG 449
Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
R++ F A+LGH + +EP
Sbjct: 450 RIFGFGDNERAQLGHDSLRGCLEP 473
Score = 133 (51.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 29/76 (38%), Positives = 40/76 (52%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV-KAIHVATGDYTTFVVSEDGDVYS 334
++G T G +G LGHG+ VPKVV+ L + + +A G V++DG VYS
Sbjct: 233 REGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYS 292
Query: 335 FGCGESASLGHNAIAD 350
FG G + LGH D
Sbjct: 293 FGSGSNFCLGHGEQQD 308
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 253 (94.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 74/296 (25%), Positives = 126/296 (42%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 3868 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 3927
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G GV GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3928 KLYATGYGAGGRL--GVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3985
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L VV + +G +Y+
Sbjct: 3986 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGTEVVDVAAGGAHSACVTA--AG-DLYTWGK 4040
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 4041 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4100
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4101 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4156
Score = 226 (84.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 83/307 (27%), Positives = 129/307 (42%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L
Sbjct: 2914 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 2973
Query: 103 XXX---XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2974 HSGGRHATALTVD-GKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSS 3030
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 3031 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3089
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDG 278
G+ V+S P+ IE+ LN Q + G
Sbjct: 3090 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3145
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3146 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3205
Query: 339 ESASLGH 345
+ G+
Sbjct: 3206 DHGQQGN 3212
Score = 216 (81.1 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 62/236 (26%), Positives = 107/236 (45%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAV 163
+ ++ G+VY++G G +G T + P+++ + VV A G+ ++A
Sbjct: 419 LALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 476
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ EG +YT+ GN RLGH + ++ P + G L+ + V+ + +G
Sbjct: 477 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENG 535
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V+S K P+LIE+ Q L++ +DG+V +W
Sbjct: 536 Q-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT--KDGQVYSW 592
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 593 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 648
Score = 212 (79.7 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 48/159 (30%), Positives = 92/159 (57%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX--XXXXXTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L T+
Sbjct: 470 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 529
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 530 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 587
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+VY++ G++ RLGH TE + P L G L+ V+ +
Sbjct: 588 QVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 625
Score = 210 (79.0 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 75/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 3969 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSAC 4028
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4029 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4086
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 4087 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 4142
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + +DG V TWG
Sbjct: 4143 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDND 4200
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4201 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4240
Score = 194 (73.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 60/214 (28%), Positives = 96/214 (44%)
Query: 139 SPQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHP 194
+PQLV+ L +NI + A + G+ + A L+ G VY++ G+ RLGH T P + EP
Sbjct: 394 APQLVQGLASRNIVKIAAHSDGHHYLA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKV 451
Query: 195 LL---GTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLI 251
+ G VV I + +Y+ S DE P L+
Sbjct: 452 ISAFSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLV 508
Query: 252 EQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 509 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 568
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ V G + +++DG VYS+G G++ LGH
Sbjct: 569 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 602
Score = 186 (70.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 64/299 (21%), Positives = 121/299 (40%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLIS 111
G A T + V+ +G N QLG G + + P +L ++
Sbjct: 2871 GLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2929
Query: 112 DAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREG 168
G+VYA G+ + G G+ GT V P+ + +L + V + A+ G L+ +G
Sbjct: 2930 VEGKVYACGEATNGRLGLGISSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 2987
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
+V+++ G+D +LGH + N +P +E + +I S +Y+
Sbjct: 2988 KVFSWGEGDDGKLGHFSRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYT 3043
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY 288
T + P++++ + +G V +WG G +
Sbjct: 3044 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3103
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3104 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3162
Score = 164 (62.8 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 48/172 (27%), Positives = 79/172 (45%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 3903 EALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFI 3962
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ VV A
Sbjct: 3963 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVA 4020
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +
Sbjct: 4021 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDV 4071
Score = 147 (56.8 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 61/290 (21%), Positives = 112/290 (38%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX----XXXTML 109
H +A+ + G VYS+G G+LGHG T P+ I + +
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 476
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 477 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 534
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G VY
Sbjct: 535 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALTKD--GQ-VY 590
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
S + ++P+L+E Q + +D V +WG
Sbjct: 591 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG-SN 647
Query: 288 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
C + P + L+ + +A G +F S + +S G
Sbjct: 648 DQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWSSCSE-WSIG 696
Score = 144 (55.7 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I L ++
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 582
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 583 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 640
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP 194
V+ SWG++ + H +P P
Sbjct: 641 VH--SWGSNDQCQHFDTLRVTKPEP 663
Score = 139 (54.0 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++
Sbjct: 4137 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTW 4196
Query: 336 GCGESASLG 344
G + LG
Sbjct: 4197 GDNDEGQLG 4205
Score = 137 (53.3 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 3951 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 4009
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L + + VA G + V+ GD+Y++G G LGH+ D
Sbjct: 4010 SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4053
Score = 136 (52.9 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L
Sbjct: 3123 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3177
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3178 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3235
Query: 155 AIGN 158
A G+
Sbjct: 3236 ACGS 3239
Score = 134 (52.2 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 3086 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3145
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 3146 VVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVY--A 3201
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 3202 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3235
Score = 129 (50.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 243 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 390 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 449
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 450 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 508
Score = 93 (37.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G S+A+T G VYS+G + +LGHGT E P+ + L + +
Sbjct: 576 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 635
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
++ +V+++G + + ++ TK P + L +V A G
Sbjct: 636 TEDSEVHSWGSNDQCQHFDTLRVTK--PEPSALPGLDTKHIVGIACG 680
Score = 70 (29.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 129 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G+ G K V P E L N+ V Q A +LSR GRVYT ++ +D
Sbjct: 339 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD 391
Score = 63 (27.2 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+V WG +G G+G P +VQ L K VA G
Sbjct: 3197 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3238
Score = 38 (18.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 3617 DGSVNGWGW 3625
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 253 (94.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 74/296 (25%), Positives = 126/296 (42%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 3958 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4017
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G GV GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4018 KLYATGYGAGGRL--GVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4075
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L VV + +G +Y+
Sbjct: 4076 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGTEVVDVAAGGAHSACVTA--AG-DLYTWGK 4130
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 4131 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4190
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4191 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4246
Score = 226 (84.6 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 83/307 (27%), Positives = 129/307 (42%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L
Sbjct: 3004 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3063
Query: 103 XXX---XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3064 HSGGRHATALTVD-GKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSS 3120
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 3121 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3179
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDG 278
G+ V+S P+ IE+ LN Q + G
Sbjct: 3180 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3235
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3236 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3295
Query: 339 ESASLGH 345
+ G+
Sbjct: 3296 DHGQQGN 3302
Score = 216 (81.1 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 62/236 (26%), Positives = 107/236 (45%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAV 163
+ ++ G+VY++G G +G T + P+++ + VV A G+ ++A
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ EG +YT+ GN RLGH + ++ P + G L+ + V+ + +G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENG 625
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V+S K P+LIE+ Q L++ +DG+V +W
Sbjct: 626 Q-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT--KDGQVYSW 682
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 212 (79.7 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 48/159 (30%), Positives = 92/159 (57%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX--XXXXXTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+VY++ G++ RLGH TE + P L G L+ V+ +
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 715
Score = 210 (79.0 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 75/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 4059 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSAC 4118
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4119 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4176
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 4177 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 4232
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + +DG V TWG
Sbjct: 4233 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCSEDGEVYTWGDND 4290
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4291 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4330
Score = 194 (73.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 60/214 (28%), Positives = 96/214 (44%)
Query: 139 SPQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHP 194
+PQLV+ L +NI + A + G+ + A L+ G VY++ G+ RLGH T P + EP
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKV 541
Query: 195 LL---GTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLI 251
+ G VV I + +Y+ S DE P L+
Sbjct: 542 ISAFSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 252 EQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ V G + +++DG VYS+G G++ LGH
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 692
Score = 186 (70.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 64/299 (21%), Positives = 121/299 (40%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLIS 111
G A T + V+ +G N QLG G + + P +L ++
Sbjct: 2961 GLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3019
Query: 112 DAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREG 168
G+VYA G+ + G G+ GT V P+ + +L + V + A+ G L+ +G
Sbjct: 3020 VEGKVYACGEATNGRLGLGISSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3077
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
+V+++ G+D +LGH + N +P +E + +I S +Y+
Sbjct: 3078 KVFSWGEGDDGKLGHFSRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYT 3133
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY 288
T + P++++ + +G V +WG G +
Sbjct: 3134 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3193
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3194 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3252
Score = 164 (62.8 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 48/172 (27%), Positives = 79/172 (45%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 3993 EALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFI 4052
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ VV A
Sbjct: 4053 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGTEVVDVA 4110
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +
Sbjct: 4111 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDV 4161
Score = 147 (56.8 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 61/290 (21%), Positives = 112/290 (38%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX----XXXTML 109
H +A+ + G VYS+G G+LGHG T P+ I + +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSVALTKD--GQ-VY 680
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
S + ++P+L+E Q + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG-SN 737
Query: 288 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
C + P + L+ + +A G +F S + +S G
Sbjct: 738 DQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWSSCSE-WSIG 786
Score = 144 (55.7 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I L ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP 194
V+ SWG++ + H +P P
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEP 753
Score = 139 (54.0 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG SEDG+VY++
Sbjct: 4227 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTW 4286
Query: 336 GCGESASLG 344
G + LG
Sbjct: 4287 GDNDEGQLG 4295
Score = 137 (53.3 bits), Expect = 8.7e-23, Sum P(2) = 8.7e-23
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 4041 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 4099
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L + + VA G + V+ GD+Y++G G LGH+ D
Sbjct: 4100 SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4143
Score = 136 (52.9 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L
Sbjct: 3213 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3267
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3268 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3325
Query: 155 AIGN 158
A G+
Sbjct: 3326 ACGS 3329
Score = 134 (52.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 3176 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3235
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 3236 VVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVY--A 3291
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 3292 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3325
Score = 129 (50.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 243 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 480 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Score = 93 (37.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G S+A+T G VYS+G + +LGHGT E P+ + L + +
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
++ +V+++G + + ++ TK P + L +V A G
Sbjct: 726 TEDSEVHSWGSNDQCQHFDTLRVTK--PEPSALPGLDTKHIVGIACG 770
Score = 70 (29.7 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 129 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G+ G K V P E L N+ V Q A +LSR GRVYT ++ +D
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD 481
Score = 63 (27.2 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+V WG +G G+G P +VQ L K VA G
Sbjct: 3287 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3328
Score = 38 (18.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 3707 DGSVNGWGW 3715
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 257 (95.5 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 74/296 (25%), Positives = 127/296 (42%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4005 KLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L I VV + +G +Y+
Sbjct: 4063 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGK 4117
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4233
Score = 228 (85.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 83/307 (27%), Positives = 129/307 (42%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV 3052
Query: 103 XXX---XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3053 HSGGRHATALTVD-GKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3168
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDG 278
G+ V+S P+ IE+ LN Q + G
Sbjct: 3169 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3224
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 339 ESASLGH 345
+ G+
Sbjct: 3285 DHGQQGN 3291
Score = 216 (81.1 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 62/236 (26%), Positives = 107/236 (45%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAV 163
+ ++ G+VY++G G +G T + P+++ + VV A G+ ++A
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ EG +YT+ GN RLGH + ++ P + G L+ + V+ + +G
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENG 624
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V+S K P+LIE+ Q L++ +DG+V +W
Sbjct: 625 Q-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT--KDGQVYSW 681
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 682 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 211 (79.3 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 48/159 (30%), Positives = 92/159 (57%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX--XXXXXTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L T+
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+VY++ G++ RLGH TE + P L G L+ V+ +
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 714
Score = 206 (77.6 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 75/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 4046 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4105
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4106 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 4219
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + +DG V TWG
Sbjct: 4220 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4278 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4317
Score = 195 (73.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 60/214 (28%), Positives = 96/214 (44%)
Query: 139 SPQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHP 194
+PQLV+ L +NI + A + G+ + A L+ G VY++ G+ RLGH T P + EP
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKV 540
Query: 195 LL---GTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLI 251
+ G VV I + +Y+ S DE P L+
Sbjct: 541 ISAFSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 252 EQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ V G + +++DG VYS+G G++ LGH
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691
Score = 186 (70.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 64/299 (21%), Positives = 121/299 (40%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLIS 111
G A T + V+ +G N QLG G + + P +L ++
Sbjct: 2950 GLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3008
Query: 112 DAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREG 168
G+VYA G+ + G G+ GT V P+ + +L + V + A+ G L+ +G
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3066
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
+V+++ G+D +LGH + N +P +E + +I S +Y+
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYT 3122
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY 288
T + P++++ + +G V +WG G +
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241
Score = 170 (64.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 50/172 (29%), Positives = 80/172 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 3980 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4039
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4097
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV I
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDI 4148
Score = 146 (56.5 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 52/237 (21%), Positives = 95/237 (40%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX----XXXTML 109
H +A+ + G VYS+G G+LGHG T P+ I + +
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 623
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G VY
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALTKD--GQ-VY 679
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWG 284
S + ++P+L+E Q + +D V +WG
Sbjct: 680 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 144 (55.7 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I L ++
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP 194
V+ SWG++ + H +P P
Sbjct: 730 VH--SWGSNDQCQHFDTLRVTKPEP 752
Score = 140 (54.3 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 4086
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L ++ + VA G + V+ GD+Y++G G LGH+ D
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130
Score = 136 (52.9 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4214 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4273
Query: 336 GCGESASLG 344
G + LG
Sbjct: 4274 GDNDEGQLG 4282
Score = 135 (52.6 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 3225 VVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY--A 3280
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3314
Score = 133 (51.9 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L
Sbjct: 3202 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3256
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3257 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3314
Query: 155 AIGN 158
A G+
Sbjct: 3315 ACGS 3318
Score = 129 (50.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 243 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 479 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 538
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 539 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Score = 70 (29.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 129 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G+ G K V P E L N+ V Q A +LSR GRVYT ++ +D
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD 480
Score = 63 (27.2 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+V WG +G G+G P +VQ L K VA G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3317
Score = 38 (18.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 3694 DGSVNGWGW 3702
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 257 (95.5 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 74/296 (25%), Positives = 127/296 (42%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4007
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4008 KLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4065
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L I VV + +G +Y+
Sbjct: 4066 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGK 4120
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4180
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4181 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4236
Score = 226 (84.6 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 83/307 (27%), Positives = 129/307 (42%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 XXX---XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDG 278
G+ V+S P+ IE+ LN Q + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 216 (81.1 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 62/236 (26%), Positives = 107/236 (45%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAV 163
+ ++ G+VY++G G +G T + P+++ + VV A G+ ++A
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ EG +YT+ GN RLGH + ++ P + G L+ + V+ + +G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENG 625
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V+S K P+LIE+ Q L++ +DG+V +W
Sbjct: 626 Q-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT--KDGQVYSW 682
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 211 (79.3 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 48/159 (30%), Positives = 92/159 (57%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX--XXXXXTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ VV+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+VY++ G++ RLGH TE + P L G L+ V+ +
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 715
Score = 207 (77.9 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 75/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 4049 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4108
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ VV A G+ T L+ +
Sbjct: 4109 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 4167 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 4222
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + +DG V TWG
Sbjct: 4223 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4281 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4320
Score = 195 (73.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 60/214 (28%), Positives = 96/214 (44%)
Query: 139 SPQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHP 194
+PQLV+ L +NI + A + G+ + A L+ G VY++ G+ RLGH T P + EP
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKV 541
Query: 195 LL---GTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLI 251
+ G VV I + +Y+ S DE P L+
Sbjct: 542 ISAFSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 252 EQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ V G + +++DG VYS+G G++ LGH
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692
Score = 184 (69.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 64/299 (21%), Positives = 121/299 (40%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLIS 111
G A T + V+ +G N QLG G + + P +L ++
Sbjct: 2951 GLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 112 DAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREG 168
G+VYA G+ + G G+ GT V P+ + +L + V + A+ G L+ +G
Sbjct: 3010 VEGKVYACGEATNGRLGLGLSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3067
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
+V+++ G+D +LGH + N +P +E + +I S +Y+
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELYT 3123
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY 288
T + P++++ + +G V +WG G +
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Score = 169 (64.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 3983 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4042
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4100
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G +YT+ G RLGH + ++P L+ L+ VV +
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDV 4151
Score = 146 (56.5 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 52/237 (21%), Positives = 95/237 (40%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX----XXXTML 109
H +A+ + G VYS+G G+LGHG T P+ I + +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ VV++ G VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVVKVRCGSQFSIALTKD--GQ-VY 680
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWG 284
S + ++P+L+E Q + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 144 (55.7 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I L ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP 194
V+ SWG++ + H +P P
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEP 753
Score = 140 (54.3 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 4089
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L ++ + VA G + V+ GD+Y++G G LGH+ D
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4133
Score = 136 (52.9 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4217 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4276
Query: 336 GCGESASLG 344
G + LG
Sbjct: 4277 GDNDEGQLG 4285
Score = 136 (52.9 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++DAGQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 134 (52.2 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 3226 VVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVY--A 3281
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3315
Score = 129 (50.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 243 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 480 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Score = 70 (29.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 129 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G+ G K V P E L N+ V Q A +LSR GRVYT ++ +D
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD 481
Score = 63 (27.2 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+V WG +G G+G P +VQ L K VA G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 38 (18.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 3697 DGSVNGWGW 3705
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 256 (95.2 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 74/296 (25%), Positives = 127/296 (42%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3949
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 3950 KLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4007
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L I VV + +G +Y+
Sbjct: 4008 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGK 4062
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 4063 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4122
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4123 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4178
Score = 231 (86.4 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 84/307 (27%), Positives = 129/307 (42%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L
Sbjct: 2937 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 2996
Query: 103 XXX---XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 2997 HSGGRHATALTVD-GKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSS 3053
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 3054 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3112
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDG 278
G+ V+S P+ IE+ LN Q + G
Sbjct: 3113 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3168
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3169 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3228
Query: 339 ESASLGH 345
+ G+
Sbjct: 3229 DHGQQGN 3235
Score = 216 (81.1 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 62/236 (26%), Positives = 106/236 (44%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAV 163
+ ++ G+VY++G G +G T + P+++ + VV A G+ ++A
Sbjct: 454 LALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ EG +YT+ GN RLGH + ++ P + G L+ + V+ + +G
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENG 570
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V+S K P+LIE+ Q +L +DG+V +W
Sbjct: 571 Q-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ--DLDVIKVRCGSQFSIALTKDGQVYSW 627
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 628 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 683
Score = 210 (79.0 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 47/159 (29%), Positives = 92/159 (57%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX--XXXXXTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L T+
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 565 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 622
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+VY++ G++ RLGH TE + P L G L+ V+ +
Sbjct: 623 QVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 660
Score = 205 (77.2 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 74/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 3991 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4050
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4051 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4108
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 4109 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 4164
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + +DG V TWG
Sbjct: 4165 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4222
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4223 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4262
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 61/214 (28%), Positives = 96/214 (44%)
Query: 139 SPQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHP 194
+PQLV+ L +NI + A + G+ + A L+ G VY++ G+ RLGH T P + EP
Sbjct: 429 APQLVQGLASRNIVKIAAHSDGHHYLA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKV 486
Query: 195 LL---GTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLI 251
+ G VV I + +Y+ S DE P L+
Sbjct: 487 ISAFSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLV 543
Query: 252 EQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 603
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
I V G + +++DG VYS+G G++ LGH
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 637
Score = 184 (69.8 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 63/300 (21%), Positives = 121/300 (40%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLI 110
PG T + V+ +G N QLG G + + P +L +
Sbjct: 2893 PGLESTATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 2951
Query: 111 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
+ G+VY+ G+ + G G+ GT V P+ + +L + V + A+ G L+ +
Sbjct: 2952 TVEGKVYSCGEATNGRLGLGMSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3009
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+D +LGH + N +P +E + +I S +Y
Sbjct: 3010 GKVFSWGEGDDGKLGHFSRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELY 3065
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ T + P++++ + +G V +WG G
Sbjct: 3066 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3125
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3126 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3185
Score = 169 (64.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 3925 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 3984
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 3985 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4042
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ I
Sbjct: 4043 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDI 4093
Score = 145 (56.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 51/237 (21%), Positives = 95/237 (40%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX----XXXTML 109
H +A+ + G VYS+G G+LGHG T P+ I + +
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 569
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G VY
Sbjct: 570 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALTKD--GQ-VY 625
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWG 284
S + ++P+L+E Q + +D V +WG
Sbjct: 626 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 144 (55.7 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I L ++
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 617
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP 194
V+ SWG++ + H +P P
Sbjct: 676 VH--SWGSNDQCQHFDTLRVTKPEP 698
Score = 140 (54.3 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 3973 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 4031
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L ++ + VA G + V+ GD+Y++G G LGH+ D
Sbjct: 4032 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4075
Score = 136 (52.9 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4159 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4218
Query: 336 GCGESASLG 344
G + LG
Sbjct: 4219 GDNDEGQLG 4227
Score = 135 (52.6 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 3109 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3168
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 3169 VVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY--A 3224
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3258
Score = 133 (51.9 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L
Sbjct: 3146 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3200
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3201 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3258
Query: 155 AIGN 158
A G+
Sbjct: 3259 ACGS 3262
Score = 128 (50.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 243 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 425 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 484
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 485 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543
Score = 67 (28.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 129 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G+ G K V P E L ++ V+Q A +LSR GRVYT ++ +D
Sbjct: 374 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD 426
Score = 63 (27.2 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+V WG +G G+G P +VQ L K VA G
Sbjct: 3220 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3261
Score = 38 (18.4 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 3639 DGSVNGWGW 3647
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 256 (95.2 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 74/296 (25%), Positives = 127/296 (42%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4007 KLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4064
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L I VV + +G +Y+
Sbjct: 4065 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGK 4119
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4179
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4180 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4235
Score = 231 (86.4 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 84/307 (27%), Positives = 129/307 (42%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 3053
Query: 103 XXX---XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3054 HSGGRHATALTVD-GKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 3169
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDG 278
G+ V+S P+ IE+ LN Q + G
Sbjct: 3170 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 3225
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3285
Query: 339 ESASLGH 345
+ G+
Sbjct: 3286 DHGQQGN 3292
Score = 216 (81.1 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 62/236 (26%), Positives = 106/236 (44%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAV 163
+ ++ G+VY++G G +G T + P+++ + VV A G+ ++A
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHG--DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ EG +YT+ GN RLGH + ++ P + G L+ + V+ + +G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENG 625
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V+S K P+LIE+ Q +L +DG+V +W
Sbjct: 626 Q-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ--DLDVIKVRCGSQFSIALTKDGQVYSW 682
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 210 (79.0 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 47/159 (29%), Positives = 92/159 (57%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX--XXXXXTM 108
G +S A+T++G +Y++G + G+LGHG++E+E P + L T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ V++ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+VY++ G++ RLGH TE + P L G L+ V+ +
Sbjct: 678 QVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDV 715
Score = 205 (77.2 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 74/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 4048 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 4107
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4108 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 4221
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + +DG V TWG
Sbjct: 4222 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4280 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 4319
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 61/214 (28%), Positives = 96/214 (44%)
Query: 139 SPQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPHP 194
+PQLV+ L +NI + A + G+ + A L+ G VY++ G+ RLGH T P + EP
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLA-LAATGEVYSWGCGDGGRLGHGDTVPLE-EPKV 541
Query: 195 LL---GTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLI 251
+ G VV I + +Y+ S DE P L+
Sbjct: 542 ISAFSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 252 EQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV 311
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
I V G + +++DG VYS+G G++ LGH
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692
Score = 184 (69.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 63/300 (21%), Positives = 121/300 (40%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLI 110
PG T + V+ +G N QLG G + + P +L +
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 3008
Query: 111 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
+ G+VY+ G+ + G G+ GT V P+ + +L + V + A+ G L+ +
Sbjct: 3009 TVEGKVYSCGEATNGRLGLGMSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+D +LGH + N +P +E + +I S +Y
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ T + P++++ + +G V +WG G
Sbjct: 3123 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Score = 169 (64.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 3982 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4041
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 4099
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ I
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDI 4150
Score = 146 (56.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 60/290 (20%), Positives = 112/290 (38%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX----XXXTML 109
H +A+ + G VYS+G G+LGHG T P+ I + +
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ G++Y +G+ ++G +G + + P LV LK + V+ A G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+ +LG P L+ L+++ V+++ G VY
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDVIKVRCGSQFSIALTKD--GQ-VY 680
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
S + ++P+L+E Q + +D V +WG
Sbjct: 681 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ--GKKVIDVAAGSTHCLALTEDSEVHSWG-SN 737
Query: 288 YGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
C + P + L+ + +A G +F S + +S G
Sbjct: 738 DQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWSSCSE-WSIG 786
Score = 145 (56.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 42/159 (26%), Positives = 75/159 (47%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I L ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY++GK +G + + V P+L+E L+ V+ A G+ L+ +
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQI 207
V+ SWG++ + H +P P L L++ +V I
Sbjct: 731 VH--SWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGI 767
Score = 140 (54.3 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 4088
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L ++ + VA G + V+ GD+Y++G G LGH+ D
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132
Score = 136 (52.9 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4216 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4275
Query: 336 GCGESASLG 344
G + LG
Sbjct: 4276 GDNDEGQLG 4284
Score = 135 (52.6 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 3226 VVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY--A 3281
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3315
Score = 133 (51.9 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L
Sbjct: 3203 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 3257
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3258 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3315
Query: 155 AIGN 158
A G+
Sbjct: 3316 ACGS 3319
Score = 128 (50.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 243 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ G V +WG G G LGHG+ P
Sbjct: 480 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
KV+ A + +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Score = 94 (38.1 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G SIA+T G VYS+G + +LGHGT E P+ + L + +
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
++ +V+++G + + ++ TK P + L + +V A G
Sbjct: 726 TEDSEVHSWGSNDQCQHFDTLRVTK--PEPTALPGLDSKHIVGIACG 770
Score = 67 (28.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 129 YGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G+ G K V P E L ++ V+Q A +LSR GRVYT ++ +D
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSD 481
Score = 63 (27.2 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+V WG +G G+G P +VQ L K VA G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3318
Score = 38 (18.4 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 3696 DGSVNGWGW 3704
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 255 (94.8 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 74/296 (25%), Positives = 127/296 (42%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 3943 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 4002
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG +Y+
Sbjct: 4003 KLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYS 4060
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L + VV I SG +Y+
Sbjct: 4061 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGVEVVDIAAGGAHSACITA--SG-ELYTWGK 4115
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 4116 GRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 4175
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 4176 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4231
Score = 224 (83.9 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 81/306 (26%), Positives = 128/306 (41%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT++G VY+ G ++G+LG G + PR I +L
Sbjct: 2989 NVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAV 3048
Query: 103 XXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
M ++ G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 3049 HSGGRHAMALTVDGKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3106
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
+A ++ G +Y++ G RLGH + P L+ L VVQ+
Sbjct: 3107 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK-LVKVLLGHRVVQVACGSRDAQTLALT 3165
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGR 279
GM V+S P+ IE+ LN Q + G
Sbjct: 3166 DEGM-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3221
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P++V+ L K +HVA G V+E G V+++G +
Sbjct: 3222 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDND 3281
Query: 340 SASLGH 345
G+
Sbjct: 3282 HGQQGN 3287
Score = 213 (80.0 bits), Expect = 8.2e-23, Sum P(2) = 8.2e-23
Identities = 48/159 (30%), Positives = 93/159 (58%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX--XXXXXTM 108
G +S A+T+ G ++++G + G+LGHG++E++ P + +L T+
Sbjct: 549 GSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTL 608
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+LVE L+++ +V+ G+ F+ L+++G
Sbjct: 609 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDG 666
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+VYT+ G++ RLGH T+ + P LL +L+ VV I
Sbjct: 667 QVYTWGKGDNQRLGHGTDEHVRYPK-LLDSLQGKRVVDI 704
Score = 208 (78.3 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 74/280 (26%), Positives = 116/280 (41%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G +YS+G G+LGHG RPR I SL +
Sbjct: 4044 SGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSAC 4103
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ +G++Y +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4104 ITASGELYTWGKGRYGRLGHGDSEDQL--KPKLVEALQGHRVIDVACGSGDAQTLCLTDD 4161
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 4162 DMVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 4217
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + +DG V TWG
Sbjct: 4218 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 4275
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4276 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4315
Score = 198 (74.8 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 57/236 (24%), Positives = 108/236 (45%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIF--VVQAAIGNFFTAV 163
+ +S G+V+++G G +G T + P ++ S + + VV A G+ ++A
Sbjct: 498 LALSVNGEVFSWGCGDGGRLGHG--DTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAA 555
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ +G ++T+ GN RLGH + + P L+ L+ + V+ + +G
Sbjct: 556 ITADGELHTWGRGNYGRLGHGSSEDQTTPM-LVTALKGLKVIDVACGSGDAQTLAVTENG 614
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V+S K P+L+E+ Q L++ +DG+V TW
Sbjct: 615 Q-VWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALT--KDGQVYTW 671
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LGHG +E PK++ +L + + +A G ++E+G+V+S+G +
Sbjct: 672 GKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSND 727
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 66/248 (26%), Positives = 108/248 (43%)
Query: 115 QVYAFG---KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+V+ +G KD G G++G+K+ P E+L + VVQ A G+ ++ EG+VY
Sbjct: 2956 KVFVWGLNDKDQLG----GLKGSKIKV-PSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 3010
Query: 172 TFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVX 230
+ RLG + P P + L N V ++ G V+S
Sbjct: 3011 ACGEATNGRLGLGLSSGTI-PIPRQISALSNYVVKKVAVHSGGRHAMALTVDGK-VFSWG 3068
Query: 231 XXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC 290
SR + PRLIE + ++ G + +WG G YG
Sbjct: 3069 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS--GELYSWGLGEYGR 3126
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATG--DYTTFVVSEDGDVYSFGCGESASLGHNAI 348
LGHG+ + PK+V+ L + + VA G D T ++++G V+S+G G+ LG
Sbjct: 3127 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGG- 3185
Query: 349 ADGQVCSL 356
++G C++
Sbjct: 3186 SEG--CNI 3191
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 68/297 (22%), Positives = 122/297 (41%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLIS 111
G A T + V+ +G N QLG G + + P +L ++
Sbjct: 2946 GLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3004
Query: 112 DAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREG 168
G+VYA G+ + G G+ GT + P+ + +L N V + A+ G L+ +G
Sbjct: 3005 AEGKVYACGEATNGRLGLGLSSGT--IPIPRQISALSNYVVKKVAVHSGGRHAMALTVDG 3062
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
+V+++ G+D +LGH + N +P L+ L+ + I SG +YS
Sbjct: 3063 KVFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAITS--SG-ELYS 3118
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY 288
T + P+L++ + +G V +WG G +
Sbjct: 3119 WGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDF 3178
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3179 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3235
Score = 180 (68.4 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 55/219 (25%), Positives = 94/219 (42%)
Query: 132 QGTKLVT-SPQLVESLKNIFVVQAAI---GNFFTAVLSREGRVYTFSWGNDARLGHHTEP 187
Q K T +P LV +L + +++ A G + A LS G V+++ G+ RLGH
Sbjct: 465 QNYKSTTLAPMLVHALTSRKIMKLAAHPDGQHYLA-LSVNGEVFSWGCGDGGRLGHGDTT 523
Query: 188 NDVEPHPLLGTLENIPV-VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEK 246
EP ++ PV Q+ + +++ S D+
Sbjct: 524 YLEEP-TMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQT 582
Query: 247 HPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
P L+ + L + ++G+V +WG G YG LG G + PK+V+
Sbjct: 583 TPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVE 642
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
L D+ + V G + +++DG VY++G G++ LGH
Sbjct: 643 KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGH 681
Score = 166 (63.5 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 46/172 (26%), Positives = 80/172 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 3978 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4037
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G++Y++G+ G+ +G + P+++ESL+ + VV A
Sbjct: 4038 RKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIA 4095
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ +
Sbjct: 4096 AGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPK-LVEALQGHRVIDV 4146
Score = 155 (59.6 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 43/150 (28%), Positives = 72/150 (48%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G ++AVT G V+S+G G+LG G ++ P+ + L ++
Sbjct: 602 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 661
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY +GK +G + V P+L++SL+ VV A+G+ L+ EG
Sbjct: 662 LTKDGQVYTWGKGDNQRLGHGTD--EHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGE 719
Query: 170 VYTFSWGNDARLGHHTE--PNDVEPHPLLG 197
V+ SWG++ +L H N +P L G
Sbjct: 720 VH--SWGSNDKLQHFDTLFSNKKQPKALPG 747
Score = 137 (53.3 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 3161 TLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3220
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+V F+
Sbjct: 3221 VVWTWGKGDYFRLGHGTDVH--VRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQV--FA 3276
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 3277 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3310
Score = 136 (52.9 bits), Expect = 8.2e-23, Sum P(2) = 8.2e-23
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 4212 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4271
Query: 336 GCGESASLG 344
G + LG
Sbjct: 4272 GDNDEGQLG 4280
Score = 133 (51.9 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G + +WG G LGHGN C+ P+V++
Sbjct: 4026 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDR-PRVIE 4084
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L V+ + +A G + ++ G++Y++G G LGH D
Sbjct: 4085 SLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSED 4128
Score = 133 (51.9 bits), Expect = 0.00012, P = 0.00012
Identities = 57/280 (20%), Positives = 113/280 (40%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-----RSLXXXXXXXXXXXXXXTM 108
H +A++ G V+S+G G+LGHG T P I R +
Sbjct: 496 HYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAA 555
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSR 166
+ +D G+++ +G+ ++G +G + T+P LV +LK + V+ A G+ T ++
Sbjct: 556 ITAD-GELHTWGRGNYGRLGHGSSEDQ--TTPMLVTALKGLKVIDVACGSGDAQTLAVTE 612
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 226
G+V+++ G+ +LG P L+ L+++ +V++ G V
Sbjct: 613 NGQVWSWGDGDYGKLGRGGSDGCKTPK-LVEKLQDLDIVKVCCGSQFSVALTKD--GQ-V 668
Query: 227 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 286
Y+ + ++P+L++ Q + ++G V +WG
Sbjct: 669 YTWGKGDNQRLGHGTDEHVRYPKLLDSLQ--GKRVVDIAVGSTHCLALTEEGEVHSWGSN 726
Query: 287 RYGCLGHGNE--ECESVPKVVQALNDVKAIHVATGDYTTF 324
L H + + PK + LN + ++ G +F
Sbjct: 727 DK--LQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSF 764
Score = 128 (50.1 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L
Sbjct: 3198 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3252
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ +++ GQV+A+G + G+ G T + P LV+ L+ + +
Sbjct: 3253 KKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3310
Query: 155 AIGN 158
A G+
Sbjct: 3311 ACGS 3314
Score = 64 (27.6 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+ G+V WG +G G+G P +VQ L K VA G
Sbjct: 3270 ETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3313
Score = 38 (18.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 3692 DGSVNGWGW 3700
Score = 37 (18.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
H + E + V++ L+ + + +Y +S GDV
Sbjct: 2132 HSSTLAEEIVTVLRTLHSLSQWNALINEYINSQLSGIGDV 2171
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 261 (96.9 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 75/296 (25%), Positives = 128/296 (43%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4010 KLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4067
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L I VV I +G +++
Sbjct: 4068 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGIEVVDIAAGGAHSACITA--AG-DLFTWGK 4122
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L D+ + V G + +++ G VY++G G+ LGH +
Sbjct: 4183 GRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4238
Score = 223 (83.6 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 65/236 (27%), Positives = 107/236 (45%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAV 163
+ +S G+V+++G G +G T + P+L+ +L VV A G+ ++A
Sbjct: 509 LALSANGEVFSWGCGDGGRLGHG--DTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ EG +YT+ GN RLGH + + P + G L+ + V+ + +G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENG 625
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V+S K P+LIE+ Q L++ +DG+V TW
Sbjct: 626 Q-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALT--KDGQVYTW 682
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 223 (83.6 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 79/306 (25%), Positives = 128/306 (41%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 103 XXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
M ++ G+++++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKIFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
+A ++ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGR 279
G+ V+S P+ IE+ LN Q + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G +
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 340 SASLGH 345
G+
Sbjct: 3290 HGQQGN 3295
Score = 211 (79.3 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 47/159 (29%), Positives = 92/159 (57%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX--XXXXXTM 108
G +S A+T++G +Y++G + G+LGHG++E++ P + L T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+VYT+ G++ RLGH TE + P L G L+ V+ +
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDV 715
Score = 202 (76.2 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 74/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ AG ++ +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L ++ VV++ SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTDLGVVKVECGSQFSVALTK--SG-AVY 4224
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + G V TWG
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDND 4284
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4285 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4324
Score = 194 (73.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 60/213 (28%), Positives = 96/213 (45%)
Query: 140 PQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPH-- 193
PQLV+SL +NI + A + G+ + A LS G V+++ G+ RLGH T P + EP
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLA-LSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLI 542
Query: 194 -PLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIE 252
L G VV I + +Y+ S D+ P L+
Sbjct: 543 SALSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVT 599
Query: 253 QFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 600 GLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ V G + +++DG VY++G G++ LGH
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH 692
Score = 188 (71.2 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 66/297 (22%), Positives = 122/297 (41%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLIS 111
G A T + V+ +G N QLG G + + P +L ++
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3012
Query: 112 DAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREG 168
G+VYA G+ + G G+ GT V P+ + +L N V + A+ G L+ +G
Sbjct: 3013 VEGKVYACGEATNGRLGLGISSGT--VPIPRQITALSNYVVKKVAVHSGGRHAMALTVDG 3070
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
+++++ G+D +LGH + N +P L+ L+ + I SG +Y+
Sbjct: 3071 KIFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAITS--SG-ELYT 3126
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY 288
T + P++++ + +G V +WG G +
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Score = 166 (63.5 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 48/172 (27%), Positives = 80/172 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ I
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDI 4153
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 39/145 (26%), Positives = 67/145 (46%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I L ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP 194
V+ SWG++ + H +P P
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEP 753
Score = 140 (54.3 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 39/160 (24%), Positives = 77/160 (48%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX----XXXTML 109
H +A+++ G V+S+G G+LGHG T P+ I +L +
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G+V+++ G+ +LG P L+ L+++ +V++
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKV 663
Score = 136 (52.9 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 155 AIGN 158
A G+
Sbjct: 3319 ACGS 3322
Score = 135 (52.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 3229 VVWTWGKGDYFRLGHGTDVH--VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVY--A 3284
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3318
Score = 134 (52.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 243 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ +G V +WG G G LGHG+ P
Sbjct: 480 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
K++ AL+ +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 133 (51.9 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 4091
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L ++ + +A G + ++ GD++++G G LGH D
Sbjct: 4092 SLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135
Score = 125 (49.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG--DVY 333
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG +VY
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVY 4278
Query: 334 SFGCGESASLG 344
++G + LG
Sbjct: 4279 TWGDNDEGQLG 4289
Score = 78 (32.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 121 KDSFGEA-EYGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
K S E +G+ G K V+ P E L N+ VVQ A +LSR GRVYT ++
Sbjct: 420 KGSLQEVIAWGLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN 479
Query: 177 NDARLG 182
+D LG
Sbjct: 480 SDT-LG 484
Score = 63 (27.2 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+V WG +G G+G P +VQ L K VA G
Sbjct: 3280 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321
Score = 38 (18.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 3699 DGSVNGWGW 3707
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 261 (96.9 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 75/296 (25%), Positives = 128/296 (43%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 4010 KLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4067
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L I VV I +G +++
Sbjct: 4068 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGIEVVDIAAGGAHSACITA--AG-DLFTWGK 4122
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L D+ + V G + +++ G VY++G G+ LGH +
Sbjct: 4183 GRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4238
Score = 223 (83.6 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 65/236 (27%), Positives = 107/236 (45%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI----FVVQAAIGNFFTAV 163
+ +S G+V+++G G +G T + P+L+ +L VV A G+ ++A
Sbjct: 509 LALSANGEVFSWGCGDGGRLGHG--DTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ EG +YT+ GN RLGH + + P + G L+ + V+ + +G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENG 625
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V+S K P+LIE+ Q L++ +DG+V TW
Sbjct: 626 Q-VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALT--KDGQVYTW 682
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
G G LGHG EE PK+++ L K I VA G ++ED +V+S+G +
Sbjct: 683 GKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 223 (83.6 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 79/306 (25%), Positives = 128/306 (41%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VY+ G ++G+LG G + PR I +L
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV 3056
Query: 103 XXXX--TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
M ++ G+++++G+ G+ G P+L+E+LK + A G+
Sbjct: 3057 HSGGRHAMALTVDGKIFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
+A ++ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGR 279
G+ V+S P+ IE+ LN Q + G
Sbjct: 3174 DEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSGV 3229
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G Y LGHG + P+VV+ L K +HVA G V++ G VY++G +
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 340 SASLGH 345
G+
Sbjct: 3290 HGQQGN 3295
Score = 211 (79.3 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 47/159 (29%), Positives = 92/159 (57%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX--XXXXXTM 108
G +S A+T++G +Y++G + G+LGHG++E++ P + L T+
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ GQV+++G +G+ G G+ +P+L+E L+++ +V+ G+ F+ L+++G
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+VYT+ G++ RLGH TE + P L G L+ V+ +
Sbjct: 678 QVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDV 715
Score = 202 (76.2 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 74/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSAC 4110
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ AG ++ +GK +G +G +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 4111 ITAAGDLFTWGKGRYGRLGHGDSEDQL--KPKLVEALQGYRVIDIACGSGDAQTLCLTDD 4168
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L ++ VV++ SG AVY
Sbjct: 4169 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTDLGVVKVECGSQFSVALTK--SG-AVY 4224
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + G V TWG
Sbjct: 4225 TWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDND 4284
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 4285 EGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWS 4324
Score = 194 (73.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 60/213 (28%), Positives = 96/213 (45%)
Query: 140 PQLVESL--KNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGH-HTEPNDVEPH-- 193
PQLV+SL +NI + A + G+ + A LS G V+++ G+ RLGH T P + EP
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLA-LSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLI 542
Query: 194 -PLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIE 252
L G VV I + +Y+ S D+ P L+
Sbjct: 543 SALSGKQAGKHVVHIACGSTYSAAITAEGE---LYTWGRGNYGRLGHGSSEDQTIPMLVT 599
Query: 253 QFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK 312
+ L + ++G+V +WG G YG LG G + PK+++ L D+
Sbjct: 600 GLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ V G + +++DG VY++G G++ LGH
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH 692
Score = 188 (71.2 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 66/297 (22%), Positives = 122/297 (41%)
Query: 53 GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLIS 111
G A T + V+ +G N QLG G + + P +L ++
Sbjct: 2954 GLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3012
Query: 112 DAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREG 168
G+VYA G+ + G G+ GT V P+ + +L N V + A+ G L+ +G
Sbjct: 3013 VEGKVYACGEATNGRLGLGISSGT--VPIPRQITALSNYVVKKVAVHSGGRHAMALTVDG 3070
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
+++++ G+D +LGH + N +P L+ L+ + I SG +Y+
Sbjct: 3071 KIFSWGEGDDGKLGHFSRMNCDKPR-LIEALKTKRIRDIACGSSHSAAITS--SG-ELYT 3126
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY 288
T + P++++ + +G V +WG G +
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 289 GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Score = 166 (63.5 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 48/172 (27%), Positives = 80/172 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 3985 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 4044
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDIA 4102
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G ++T+ G RLGH + ++P L+ L+ V+ I
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPK-LVEALQGYRVIDI 4153
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 39/145 (26%), Positives = 67/145 (46%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G ++AVT G V+S+G G+LG G ++ P+ I L ++
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQVY +GK +G + + V P+L+E LK V+ A G+ L+ +
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHP 194
V+ SWG++ + H +P P
Sbjct: 731 VH--SWGSNDQCQHFDTLRITKPEP 753
Score = 140 (54.3 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 39/160 (24%), Positives = 77/160 (48%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX----XXXTML 109
H +A+++ G V+S+G G+LGHG T P+ I +L +
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ G++Y +G+ ++G +G + T P LV LK + V+ + G+ T ++
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQ--TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTEN 624
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G+V+++ G+ +LG P L+ L+++ +V++
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKTPK-LIEKLQDLDIVKV 663
Score = 136 (52.9 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHGT +P+ + L
Sbjct: 3206 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++D GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 3318
Query: 155 AIGN 158
A G+
Sbjct: 3319 ACGS 3322
Score = 135 (52.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 3229 VVWTWGKGDYFRLGHGTDVH--VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVY--A 3284
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 3318
Score = 134 (52.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 243 TDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+D P+L++ N+ +G V +WG G G LGHG+ P
Sbjct: 480 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEP 539
Query: 303 KVVQALNDVKA----IHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
K++ AL+ +A +H+A G + ++ +G++Y++G G LGH + D + L+
Sbjct: 540 KLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598
Score = 133 (51.9 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 4091
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L ++ + +A G + ++ GD++++G G LGH D
Sbjct: 4092 SLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135
Score = 125 (49.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG--DVY 333
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG +VY
Sbjct: 4219 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVY 4278
Query: 334 SFGCGESASLG 344
++G + LG
Sbjct: 4279 TWGDNDEGQLG 4289
Score = 78 (32.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 121 KDSFGEA-EYGVQGTKL---VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
K S E +G+ G K V+ P E L N+ VVQ A +LSR GRVYT ++
Sbjct: 420 KGSLQEVIAWGLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN 479
Query: 177 NDARLG 182
+D LG
Sbjct: 480 SDT-LG 484
Score = 63 (27.2 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+V WG +G G+G P +VQ L K VA G
Sbjct: 3280 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACG 3321
Score = 38 (18.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 3699 DGSVNGWGW 3707
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 265 (98.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 83/298 (27%), Positives = 130/298 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V F WG + +LG E L+ +L IP +Q+ SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
D P L++ + + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 220 (82.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 74/268 (27%), Positives = 126/268 (47%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXX 101
+N A++ G H++A+ KG VY++G +S GQLG +EE R PR I+SL
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +S A +V+ +G++ +G+ G++ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQ-TSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 162 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
VL+ G + F WG + +LG + E + P+ LL +L + +V I
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLL-NLQPXXXXXXXXXXXXXGQDG 278
+ G V++ S + E +PR + F+L+ ++ G
Sbjct: 260 E-GG--VFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSG 314
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 64/283 (22%), Positives = 115/283 (40%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 244
+ + +L +I +VQ+ + S + + +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS-KASEVFCWGQNKYGQLGLGIECQK- 177
Query: 245 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
+ P+LI+ LL + G + WG ++G LG +E VP +
Sbjct: 178 QTSPQLIKS--LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+++L K +++ G+ T ++++G V++FG G LGHN+
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 43/152 (28%), Positives = 65/152 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG HS +T G ++ +G N GQLG + + P ++SL
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 123 (48.4 bits), Expect = 0.00030, P = 0.00030
Identities = 55/241 (22%), Positives = 95/241 (39%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G S+G+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGT-LENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXX 237
+LGH E + +P ++ +NI V Q + S
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 238 XXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNE- 296
R PR I+ L ++Q + V WG +YG LG G E
Sbjct: 122 EECIRV----PRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
+ ++ P+++++L + + VA G +FV++ G ++ +G + LG N D V +L
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 357 L 357
L
Sbjct: 236 L 236
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 263 (97.6 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 83/298 (27%), Positives = 130/298 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+QG++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+ SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
D P L++ + + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L VA G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 221 (82.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 75/268 (27%), Positives = 125/268 (46%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXX 101
+N A+A G H++A+ KG VY++G +S GQLG +EE R PR I+SL
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +S A +V+ +G++ +G+ G+ K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQ-TSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 162 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
VL+ G + F WG + +LG + E + P+ LL +L + +V I
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLL-NLQPXXXXXXXXXXXXXGQDG 278
+ G V++ S + E +PR + F+L+ ++ G
Sbjct: 260 E-GG--VFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSG 314
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 166 (63.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 43/152 (28%), Positives = 65/152 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG HS +T G ++ +G N GQLG + + P ++SL
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 125 (49.1 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 338 GESASLGHNA 347
G LGHN+
Sbjct: 269 GGYGQLGHNS 278
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00063
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 245 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWGWGRYGCLG-HGNEECESVP 302
EK + EQ L+ Q D G+V WG G LG G+EEC VP
Sbjct: 69 EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVP 128
Query: 303 KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
+ +++L+D++ + VA G Y + +S+ +V+ +G + LG Q L S+
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188
Query: 363 --QYLQI 367
++Q+
Sbjct: 189 GIPFMQV 195
Score = 119 (46.9 bits), Expect = 0.00082, P = 0.00082
Identities = 54/241 (22%), Positives = 95/241 (39%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G S+G+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGT-LENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXX 237
+LGH E + +P ++ +NI V Q + S
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 238 XXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNE- 296
R PR I+ L ++Q + V WG +YG LG G +
Sbjct: 122 EECIRV----PRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSL 356
+ ++ P+++++L + + VA G +FV++ G ++ +G + LG N D V +L
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235
Query: 357 L 357
L
Sbjct: 236 L 236
Score = 106 (42.4 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 38/143 (26%), Positives = 61/143 (42%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRS--LXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE P RS T+ + D G VY G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V A G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQ 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQI 207
+ + +L +I +VQ+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQV 142
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 263 (97.6 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 83/298 (27%), Positives = 130/298 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V F WG + +LG T+ LL +L IP +Q+ SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
D P L++ + + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 213 (80.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 74/268 (27%), Positives = 124/268 (46%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXX 101
+N A++ G H++A+ KG VY++G +S GQLG +EE R PR I+SL
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +S A +V+ +G++ +G+ G K TSPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTD-CKKQTSPQLLKSLLGIPFMQVAAGGAHS 202
Query: 162 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
VL+ G + F WG + +LG + E + P+ LL +L + +V I
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRSQKIVYICCGEDHTAALTK 259
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLL-NLQPXXXXXXXXXXXXXGQDG 278
+ G V++ S + E +PR + F+L+ ++ G
Sbjct: 260 E--G-GVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSG 314
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/152 (27%), Positives = 65/152 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG HS +T G ++ +G N GQLG + + P ++SL
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V + A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 125 (49.1 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 338 GESASLGHNA 347
G LGHN+
Sbjct: 269 GGYGQLGHNS 278
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 56/242 (23%), Positives = 95/242 (39%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGT-LENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXX 237
+LGH E + +P ++ +NI V Q + S
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121
Query: 238 XXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE 297
R PR I+ L ++Q + V WG +YG LG G +
Sbjct: 122 EECIRV----PRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD- 174
Query: 298 C--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
C ++ P+++++L + + VA G +FV++ G ++ +G + LG N D V +
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 356 LL 357
LL
Sbjct: 235 LL 236
Score = 99 (39.9 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 36/143 (25%), Positives = 60/143 (41%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLV 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQI 207
+ + +L +I +VQ+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQV 142
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 261 (96.9 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 90/304 (29%), Positives = 135/304 (44%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q G H++ +T+ G VY+ GSN QLGH + RP I L
Sbjct: 44 QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGSRH 101
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ +SD GQV ++G + G+ + ++V P++V L VVQ A GN + L+
Sbjct: 102 SLALSDWGQVLSWGDNDCGQLGHATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEP--HPL-LGTLENIPVVQIXXXXXXXXXXXXQP 221
G +Y SWG++ +LG ++ PND+ +PL L TL IP+ I
Sbjct: 161 CGELY--SWGSNIYGQLGVNS-PNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-- 215
Query: 222 SGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVC 281
SG AV+ T+ +P ++ + L ++ +G V
Sbjct: 216 SG-AVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVR--FVACGDEFSVFLTNEGGVF 272
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD-YTTFVVSEDGDVYSFGCGES 340
T G G YG LGHG E +P++V L VA G+ +T +V G VY+FG G S
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSS 332
Query: 341 ASLG 344
LG
Sbjct: 333 GQLG 336
Score = 197 (74.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 77/289 (26%), Positives = 117/289 (40%)
Query: 64 VYSFGSNSSGQLGHGTTEEEW--RPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGK 121
+Y +GS S GQLG G E+E P I T+ ++ G+VYA G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDA- 179
+ + + + + TK P L+ L++ ++Q G+ + LS G+V SWG ND
Sbjct: 67 NDYSQLGHDLP-TK---RPLLIPELQDYVIIQICCGSRHSLALSDWGQV--LSWGDNDCG 120
Query: 180 RLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXX 239
+LGH T+ V+ ++ L VVQI G +YS
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS--CG-ELYSWGSNIYGQLGV 177
Query: 240 XSRTDEKHPRL-IEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC--LGHGNE 296
S D H + LL + + G V +GWGR C LG +E
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWGRNNCGQLGLNDE 235
Query: 297 ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
S P ++ L + VA GD + ++ +G V++ G G LGH
Sbjct: 236 TNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
AIA G HS ++ G V+ +G N+ GQLG P +++L
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 261
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
++ +++ G V+ G ++G+ +G +++ P++V L + Q A GN T A++
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML--PRMVMELMGSTITQVACGNRHTLALVP 319
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GRVY F G+ +LG + + + P ++G
Sbjct: 320 SRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIG 351
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 64/265 (24%), Positives = 109/265 (41%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXX 105
Q G HS+A++ G V S+G N GQLGH T +E + P+ +R L
Sbjct: 94 QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNN 153
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS---PQLVESLKNIFVVQAAIGNFFTA 162
++ ++ G++Y++G + +G+ GV +T P + +L I + A G +
Sbjct: 154 HSLALTSCGELYSWGSNIYGQL--GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211
Query: 163 VLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
++S+ G V F WG N +LG + E N P L TL + V +
Sbjct: 212 LISKSGAV--FGWGRNNCGQLGLNDETNRSYPTQLK-TLRTLGV-RFVACGDEFSVFLTN 267
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRV 280
G V++ ++E PR++ + + + GRV
Sbjct: 268 EGG--VFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSR-GRV 324
Query: 281 CTWGWGRYGCLGHGNEECESVPKVV 305
+G G G LG + + +P+VV
Sbjct: 325 YAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 104 (41.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 278 GRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V +WG G LGH + E +PKVV+ L + +A G+ + ++ G++YS+G
Sbjct: 109 GQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 168
Query: 337 CGESASLGHNAIADGQVCS 355
LG N+ D C+
Sbjct: 169 SNIYGQLGVNSPNDLTHCN 187
Score = 78 (32.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 115 QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
++Y +G S G+ G ++ +++T P + + V Q A G+ T L+ G+VY
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILT-PSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64
Query: 174 SWGNDARLGHHTEPNDVEPHPLL-GTLENIPVVQI 207
+ ++LGH P PLL L++ ++QI
Sbjct: 65 GSNDYSQLGHDL-PTK---RPLLIPELQDYVIIQI 95
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 259 (96.2 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 89/337 (26%), Positives = 142/337 (42%)
Query: 23 CGGSWKLV-------LRFLLAGEACCR----RENSQAIAGPGHSIAVTSKGVVYSFGSNS 71
C G W L L+ ++A CR R + G HS+ + G VY+ G N+
Sbjct: 3 CWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 72 SGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGV 131
GQLGH E +P I +L ++ +SD GQ++++G S G+ G+
Sbjct: 63 KGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL--GL 118
Query: 132 QGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE-PND 189
T+ V P+L++ L ++Q + GN+ L+ +G+ +T+ + +LG E P+
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 190 VEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPR 249
P + +LE IP+ Q+ SG AV+ D + P
Sbjct: 179 TSPQRVR-SLEGIPLAQVAAGGAHSFALSL--SG-AVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 250 LIEQFQLLNLQPXXXXX-XXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
++ LL Q + G V T+G G G LGH + E P+ V L
Sbjct: 235 HVK---LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 309 NDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
+ +A G +T +V G +Y+FGCG LG
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 72/259 (27%), Positives = 107/259 (41%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + TSPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQ-TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
V+ + N +LG E + P H L L VV I SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLTK--SG-GVFT 265
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXX-XXXXXXXXXGQDGRVCTWGWGR 287
S DE +PR + +L+ + G + +G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 147 (56.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 43/153 (28%), Positives = 67/153 (43%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ G +P+ V L V Q A G T A++
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQL--GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 338 GESASLGHNAIAD 350
G LGH+++ D
Sbjct: 269 GSCGQLGHDSVND 281
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 257 (95.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 82/298 (27%), Positives = 129/298 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V F WG + +LG + L+ +L IP +QI SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
D P L++ + + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 210 (79.0 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 73/268 (27%), Positives = 123/268 (45%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXX 101
+N A++ G H++A+ KG VY++G +S GQLG +EE R PR I+SL
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGID-CKKQASPQLIKSLLGIPFMQIAAGGAHS 202
Query: 162 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
VL+ G + F WG + +LG + E + P+ LL +L +V I
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTK 259
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLL-NLQPXXXXXXXXXXXXXGQDG 278
+ G V++ S + E +PR + F+L+ ++ G
Sbjct: 260 E-GG--VFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSG 314
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 164 (62.8 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 43/152 (28%), Positives = 65/152 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG HS +T G ++ +G N GQLG + + P ++SL
Sbjct: 194 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 124 (48.7 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 338 GESASLGHNA 347
G LGHN+
Sbjct: 269 GGYGQLGHNS 278
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00063
Identities = 55/242 (22%), Positives = 95/242 (39%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGT-LENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXX 237
+LGH E + +P ++ +NI V Q + S
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121
Query: 238 XXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE 297
R PR I+ L ++Q + V WG +YG LG G +
Sbjct: 122 EECIRV----PRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID- 174
Query: 298 C--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
C ++ P+++++L + + +A G +FV++ G ++ +G + LG N D V +
Sbjct: 175 CKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 356 LL 357
LL
Sbjct: 235 LL 236
Score = 99 (39.9 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 36/143 (25%), Positives = 60/143 (41%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQI 207
+ + +L +I +VQ+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQV 142
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 256 (95.2 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 81/298 (27%), Positives = 129/298 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+ SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
D P L++ + + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 211 (79.3 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 73/268 (27%), Positives = 123/268 (45%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXX 101
+N A++ G H++A+ KG VY++G +S GQLG +EE R PR I+SL
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGID-CKKQASPQLIKSLLGIPFMQVAAGGAHS 202
Query: 162 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
VL+ G + F WG + +LG + E + P+ LL +L +V I
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTK 259
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLL-NLQPXXXXXXXXXXXXXGQDG 278
+ G V++ S + E +PR + F+L+ ++ G
Sbjct: 260 E-GG--VFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSG 314
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 165 (63.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 43/152 (28%), Positives = 65/152 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG HS +T G ++ +G N GQLG + + P ++SL
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 124 (48.7 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 338 GESASLGHNA 347
G LGHN+
Sbjct: 269 GGYGQLGHNS 278
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 56/242 (23%), Positives = 95/242 (39%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGT-LENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXX 237
+LGH E + +P ++ +NI V Q + S
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121
Query: 238 XXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE 297
R PR I+ L ++Q + V WG +YG LG G +
Sbjct: 122 EECIRV----PRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID- 174
Query: 298 C--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
C ++ P+++++L + + VA G +FV++ G ++ +G + LG N D V +
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 356 LL 357
LL
Sbjct: 235 LL 236
Score = 99 (39.9 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 36/143 (25%), Positives = 60/143 (41%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQI 207
+ + +L +I +VQ+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQV 142
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 256 (95.2 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 81/298 (27%), Positives = 129/298 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ V G VY+ G N GQLGH + + +P + +L T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G DS G+ G+ G++ + P+ ++SL +I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLDSDGQL--GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157
Query: 170 VYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V F WG + +LG + L+ +L IP +Q+ SG A++
Sbjct: 158 V--FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL--SG-AIF 212
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
D P L++ + + ++G V T+G G
Sbjct: 213 GWGRNKFGQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L +A G +T+ V G +YSFG G + LG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 211 (79.3 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 73/268 (27%), Positives = 123/268 (45%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXX 101
+N A++ G H++A+ KG VY++G +S GQLG +EE R PR I+SL
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +S A +V+ +G++ +G+ G+ K SPQL++SL I +Q A G +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGID-CKKQASPQLIKSLLGIPFMQVAAGGAHS 202
Query: 162 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
VL+ G + F WG + +LG + E + P+ LL +L +V I
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPN-LLKSLRTQKIVYICCGEDHTAALTK 259
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLL-NLQPXXXXXXXXXXXXXGQDG 278
+ G V++ S + E +PR + F+L+ ++ G
Sbjct: 260 E-GG--VFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSG 314
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
R+ ++G G G LG G+ P V+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 43/152 (28%), Positives = 65/152 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG HS +T G ++ +G N GQLG + + P ++SL
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T ++ G V+ FG +G+ G T +P+ V L V Q A G T A +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP 311
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG + N P + G
Sbjct: 312 SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 124 (48.7 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + WG ++G LG +E VP ++++L K +++ G+ T ++++G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 338 GESASLGHNA 347
G LGHN+
Sbjct: 269 GGYGQLGHNS 278
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 56/242 (23%), Positives = 95/242 (39%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N V G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGT-LENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXX 237
+LGH E + +P ++ +NI V Q + S
Sbjct: 64 GQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121
Query: 238 XXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE 297
R PR I+ L ++Q + V WG +YG LG G +
Sbjct: 122 EECIRV----PRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGID- 174
Query: 298 C--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
C ++ P+++++L + + VA G +FV++ G ++ +G + LG N D V +
Sbjct: 175 CKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPN 234
Query: 356 LL 357
LL
Sbjct: 235 LL 236
Score = 99 (39.9 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 36/143 (25%), Positives = 60/143 (41%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + +D +LG
Sbjct: 64 GQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLL 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQI 207
+ + +L +I +VQ+
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQV 142
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 255 (94.8 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 85/299 (28%), Positives = 127/299 (42%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ V G VY+ G N GQLGH + RP + +L T+ +
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLAL 99
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D GQVYA+G + G+ G+ GT+ + P+ ++SL I +VQ A G + + LS+
Sbjct: 100 NDKGQVYAWGLATDGQL--GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE 157
Query: 170 VYTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 226
V FSWG + +LG E PH ++ +L IP QI SG A+
Sbjct: 158 V--FSWGQNKYGQLGLGYEYKKQNSPH-VIKSLLGIPFAQIAAGGAHSFVLTL--SG-AI 211
Query: 227 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 286
+ D P L++ + + ++G V T+G G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALT--KEGGVFTFGAG 269
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLG 344
YG LGH + E P+ V L + G +TT V G +YSFG G + LG
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328
Score = 195 (73.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 72/268 (26%), Positives = 118/268 (44%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXX 101
+N A++ G H++A+ KG VY++G + GQLG TEE R PR I+SL
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVA 143
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +S +V+++G++ +G+ G + K SP +++SL I Q A G +
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQ-NSPHVIKSLLGIPFAQIAAGGAHS 202
Query: 162 AVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
VL+ G + F WG + +LG + + ND LL +L VV I
Sbjct: 203 FVLTLSGAI--FGWGRNKFGQLGLNDD-NDRYVPTLLKSLRTQKVVHICCGEDHTAALTK 259
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLL-NLQPXXXXXXXXXXXXXGQDG 278
+ G V++ S + E +PR + F+L+ +L G
Sbjct: 260 E-GG--VFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSG 314
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQ 306
R+ ++G G G LG G P V+
Sbjct: 315 RIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 188 (71.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 65/284 (22%), Positives = 113/284 (39%)
Query: 67 FGSNSSGQLGHGTTEEE--WRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSF 124
+G+ S GQLG G +EE PR T+ + D G VY G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 125 GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHH 184
G+ + K P+ V +L +V + G T L+ +G+VY + D +LG
Sbjct: 64 GQLGH----EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119
Query: 185 TEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTD 244
+ + +L I +VQ+ G V+S
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALS---KGSEVFSWGQNKYGQLGLGYEYK 176
Query: 245 EKH-PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPK 303
+++ P +I+ LL + G + WG ++G LG ++ VP
Sbjct: 177 KQNSPHVIKS--LLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
++++L K +H+ G+ T ++++G V++FG G LGHN+
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Score = 165 (63.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 43/153 (28%), Positives = 65/153 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q AG HS +T G ++ +G N GQLG + + P ++SL
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN-FFTAVL 164
T ++ G V+ FG +G+ G T +P+ V L V Q G TA +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQL--GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
GR+Y+F G + +LG T N P + G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 56/242 (23%), Positives = 97/242 (40%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++V P+ + N + G T + +G VYT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 238
+LGH E H +G L+ +V + + G VY+
Sbjct: 64 GQLGHEKARKRPE-H--VGALDAQNIVAVSCGEAHTLALNDK--GQ-VYAWGLATDGQLG 117
Query: 239 XXSRTDE--KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNE 296
T+E + PR I+ + + G + V +WG +YG LG G E
Sbjct: 118 LPG-TEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSE--VFSWGQNKYGQLGLGYE 174
Query: 297 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCS 355
+ ++ P V+++L + +A G +FV++ G ++ +G + LG N D V +
Sbjct: 175 YKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 356 LL 357
LL
Sbjct: 235 LL 236
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 255 (94.8 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 82/306 (26%), Positives = 132/306 (43%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX 102
R + G HS+ + G VY+ G N+ GQLGH + E +P PI +L
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPEPIGALAGQHIVHVAC 91
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +SD GQV+++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVK-SLDGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGR 279
SG AV+ D + P ++ LL Q + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHVK---LLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 TRGQLG 328
Score = 178 (67.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 72/261 (27%), Positives = 109/261 (41%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTML 109
G HS+A++ +G V+S+G+ S GQLG T E+ PR I+ L +
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +G++S+G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPSQA-SPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEP-HPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 226
V F WG ++ +LG E + P H L L + VV I SG V
Sbjct: 211 V--FGWGKNSSGQLGLSDERDRESPCHVKL--LRSQKVVYISCGEEHTAVLTK--SG-GV 263
Query: 227 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXX-XXXXXXXXXGQDGRVCTWGW 285
++ S DE +PR + +L+ + G + +G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 286 GRYGCLGHG---NEECESVPK 303
G G LG G N +C S K
Sbjct: 322 GTRGQLGTGHTCNVKCPSPVK 342
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 63/230 (27%), Positives = 94/230 (40%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++ PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 238
+LGH +E + EP +G L +V + Q G V+S
Sbjct: 64 GQLGHESEGSKPEP---IGALAGQHIVHVACGESHSVALSDQ--GQ-VFSWGAGSDGQLG 117
Query: 239 XXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE 296
+ D PRLI++ LN Q DG+ TWG YG LG G +
Sbjct: 118 LTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG-K 173
Query: 297 ECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
EC S P+ V++L+ + VA G +F +S G V+ +G S LG
Sbjct: 174 ECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/153 (28%), Positives = 67/153 (43%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 252 (93.8 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 81/306 (26%), Positives = 130/306 (42%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 91
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGR 279
SG AV+ D + P ++ LL Q + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEEDRESPCHVK---LLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 AKGQLG 328
Score = 182 (69.1 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 71/259 (27%), Positives = 106/259 (40%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEYPSQA-SPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
V+ + N +LG E + P H L L VV I SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRTQKVVYISCGEEHTAVLTK--SG-GVFT 265
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXX-XXXXXXXXXGQDGRVCTWGWGR 287
S DE +PR + +L+ + G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 150 (57.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/153 (28%), Positives = 68/153 (44%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343
Score = 143 (55.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 56/229 (24%), Positives = 89/229 (38%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 238
+LGH E N E +G L + +V + + G ++S
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIVHVACGESHSLALSDR--GQ-LFSWGAGSDGQLG 117
Query: 239 XXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE 296
+ D PRLI++ LN Q DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 297 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++ P+ V++L + VA G +F +S G V+ +G + LG
Sbjct: 175 YPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 338 GESASLGHNAIAD 350
G LGH+++ D
Sbjct: 269 GSCGQLGHDSMND 281
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 251 (93.4 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 81/306 (26%), Positives = 130/306 (42%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 91
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQL--GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGR 279
SG AV+ D + P ++ LL Q + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHVK---LLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 182 (69.1 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 71/259 (27%), Positives = 106/259 (40%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTML 109
G HS+A++ +G ++S+G+ S GQLG TTE+ PR I+ L +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
V+ + N +LG E + P H L L VV I SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKL--LRTQKVVYISCGEEHTAVLTK--SG-GVFT 265
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXX-XXXXXXXXXGQDGRVCTWGWGR 287
S DE +PR + +L+ + G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/153 (27%), Positives = 68/153 (44%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q AG HS A++ G V+ +G N++GQLG ++ P ++ L
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 55/229 (24%), Positives = 89/229 (38%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 238
+LGH E N E +G L + ++ + + G ++S
Sbjct: 64 GQLGHEREGNKPEQ---IGALADQHIIHVACGESHSLALSDR--GQ-LFSWGAGSDGQLG 117
Query: 239 XXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE 296
+ D PRLI++ LN Q DG+ TWG +G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 297 -ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
++ P+ V++L + VA G +F +S G V+ +G + LG
Sbjct: 175 FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 338 GESASLGHNAIAD 350
G LGH+++ D
Sbjct: 269 GSCGQLGHDSMND 281
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 250 (93.1 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 81/306 (26%), Positives = 130/306 (42%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L
Sbjct: 34 RSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADEHIVHVAC 91
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +SD GQ++++G S G+ G+ T+ V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQL--GLMTTEESVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGR 279
SG AV+ D + P ++ LL Q + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEEDRESPCHVK---LLRAQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 183 (69.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 72/259 (27%), Positives = 106/259 (40%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTML 109
G HS+A++ +G ++S+G+ S GQLG TTEE PR I+ L +
Sbjct: 92 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDARLGHHTEPNDVEP-HPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYS 228
V+ + N +LG E + P H L L VV I SG V++
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKL--LRAQKVVYISCGEEHTAVLTK--SG-GVFT 265
Query: 229 VXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXX-XXXXXXXXXGQDGRVCTWGWGR 287
S DE +PR + +L+ + G + +G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 288 YGCLGHG---NEECESVPK 303
G LG G N +C S K
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/153 (28%), Positives = 68/153 (44%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q AG HS A++ G V+ +G N++GQLG E+ P ++ L
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEE 252
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 57/230 (24%), Positives = 91/230 (39%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G S G+ +V PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 238
+LGH E N E +G L + +V + + G ++S
Sbjct: 64 GQLGHEREGNKPEQ---IGALADEHIVHVACGESHSLALSDR--GQ-LFSWGAGSDGQLG 117
Query: 239 XXSRTDEKH--PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGN 295
+ T+E PRLI++ LN Q DG+ TWG +G LG G
Sbjct: 118 LMT-TEESVAVPRLIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 296 E-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
E ++ P+ V++L + VA G +F +S G V+ +G + LG
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 338 GESASLGHNAIAD 350
G LGH+++ D
Sbjct: 269 GSCGQLGHDSMND 281
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 256 (95.2 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 74/296 (25%), Positives = 127/296 (42%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 2719 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 2778
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 2779 KLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 2836
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L I VV + +G +Y+
Sbjct: 2837 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGK 2891
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 2892 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 2951
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 2952 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 3007
Score = 231 (86.4 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 84/307 (27%), Positives = 129/307 (42%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L
Sbjct: 1802 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 1861
Query: 103 XXX---XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 1862 HSGGRHATALTVD-GKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSS 1918
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 1919 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 1977
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDG 278
G+ V+S P+ IE+ LN Q + G
Sbjct: 1978 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2033
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2034 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2093
Query: 339 ESASLGH 345
+ G+
Sbjct: 2094 DHGQQGN 2100
Score = 205 (77.2 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 74/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 2820 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 2879
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 2880 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 2937
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 2938 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 2993
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + +DG V TWG
Sbjct: 2994 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 3051
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 3052 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 3091
Score = 184 (69.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 63/300 (21%), Positives = 121/300 (40%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLI 110
PG T + V+ +G N QLG G + + P +L +
Sbjct: 1758 PGLESTATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 1816
Query: 111 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
+ G+VY+ G+ + G G+ GT V P+ + +L + V + A+ G L+ +
Sbjct: 1817 TVEGKVYSCGEATNGRLGLGMSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVD 1874
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+D +LGH + N +P +E + +I S +Y
Sbjct: 1875 GKVFSWGEGDDGKLGHFSRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELY 1930
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ T + P++++ + +G V +WG G
Sbjct: 1931 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 1990
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 1991 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 2050
Score = 169 (64.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 2754 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 2813
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 2814 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 2871
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ I
Sbjct: 2872 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDI 2922
Score = 140 (54.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 2802 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 2860
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L ++ + VA G + V+ GD+Y++G G LGH+ D
Sbjct: 2861 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 2904
Score = 136 (52.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 2988 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3047
Query: 336 GCGESASLG 344
G + LG
Sbjct: 3048 GDNDEGQLG 3056
Score = 135 (52.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 1974 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2033
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 2034 VVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY--A 2089
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 2123
Score = 133 (51.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L
Sbjct: 2011 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2065
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2066 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2123
Query: 155 AIGN 158
A G+
Sbjct: 2124 ACGS 2127
Score = 38 (18.4 bits), Expect = 0.00093, Sum P(2) = 0.00092
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 2468 DGSVNGWGW 2476
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 256 (95.2 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 74/296 (25%), Positives = 127/296 (42%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
+++ G +Y +G N GQLG + P P +L ++ G
Sbjct: 2755 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 2814
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYT 172
++YA G + G G+ GT+ V++P L+ES++++F+ + A+ G LS EG VY+
Sbjct: 2815 KLYATGYGAGGRL--GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 2872
Query: 173 FSWGNDARLGH-HTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
+ D +LGH + P D P ++ +L I VV + +G +Y+
Sbjct: 2873 WGEAEDGKLGHGNRSPCD-RPR-VIESLRGIEVVDVAAGGAHSACVTA--AG-DLYTWGK 2927
Query: 232 XXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCL 291
D+ P+L+E Q + D V +WG G YG L
Sbjct: 2928 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 2987
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
G G + VP + +L + + V G + +++ G VY++G G+ LGH +
Sbjct: 2988 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 3043
Score = 231 (86.4 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 84/307 (27%), Positives = 129/307 (42%)
Query: 45 NSQAIAGPGHSI-AVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXX 102
N +AG S+ AVT +G VYS G ++G+LG G + PR I +L
Sbjct: 1802 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAV 1861
Query: 103 XXX---XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T L D G+V+++G+ G+ G P+L+E+LK + A G+
Sbjct: 1862 HSGGRHATALTVD-GKVFSWGEGDDGKL--GHFSRMNCDKPRLIEALKTKRIRDIACGSS 1918
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXX 219
+A L+ G +YT+ G RLGH ++P ++ L V+Q+
Sbjct: 1919 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK-MVKVLLGHRVIQVACGSRDAQTLAL 1977
Query: 220 QPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDG 278
G+ V+S P+ IE+ LN Q + G
Sbjct: 1978 TDEGL-VFSWGDGDFGKLGRGGSEGCNIPQNIER---LNGQGVCQIECGAQFSLALTKSG 2033
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V TWG G Y LGHG++ P+VV+ L K +HVA G V++ G VY++G
Sbjct: 2034 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 2093
Query: 339 ESASLGH 345
+ G+
Sbjct: 2094 DHGQQGN 2100
Score = 205 (77.2 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 74/280 (26%), Positives = 114/280 (40%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A++S+G VYS+G G+LGHG RPR I SL +
Sbjct: 2856 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 2915
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
++ AG +Y +GK +G + +L P+LVE+L+ V+ A G+ T L+ +
Sbjct: 2916 VTAAGDLYTWGKGRYGRLGHSDSEDQL--KPKLVEALQGHRVIDIACGSGDAQTLCLTDD 2973
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P + +L + VV++ SG AVY
Sbjct: 2974 DTVWSWGDGDYGKLGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALTK--SG-AVY 3029
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + PR ++ Q + +DG V TWG
Sbjct: 3030 TWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDND 3087
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL K VA G T S
Sbjct: 3088 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 3127
Score = 184 (69.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 63/300 (21%), Positives = 121/300 (40%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTMLI 110
PG T + V+ +G N QLG G + + P +L +
Sbjct: 1758 PGLESTATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV 1816
Query: 111 SDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSRE 167
+ G+VY+ G+ + G G+ GT V P+ + +L + V + A+ G L+ +
Sbjct: 1817 TVEGKVYSCGEATNGRLGLGMSSGT--VPIPRQITALSSYVVKKVAVHSGGRHATALTVD 1874
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G+V+++ G+D +LGH + N +P +E + +I S +Y
Sbjct: 1875 GKVFSWGEGDDGKLGHFSRMNCDKPR----LIEALKTKRIRDIACGSSHSAALTSSGELY 1930
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ T + P++++ + +G V +WG G
Sbjct: 1931 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 1990
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNA 347
+G LG G E ++P+ ++ LN + G + +++ G V+++G G+ LGH +
Sbjct: 1991 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 2050
Score = 169 (64.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA Q I G AVT+ G +Y+ G + G+LG G TE P + S+
Sbjct: 2790 EALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI 2849
Query: 98 XXXXXXXXXT--MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ +S G+VY++G+ G+ +G + P+++ESL+ I VV A
Sbjct: 2850 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVA 2907
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +A ++ G +YT+ G RLGH + ++P L+ L+ V+ I
Sbjct: 2908 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDI 2958
Score = 140 (54.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQ 306
P L+E Q + ++ +G V +WG G LGHGN C+ P+V++
Sbjct: 2838 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR-PRVIE 2896
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+L ++ + VA G + V+ GD+Y++G G LGH+ D
Sbjct: 2897 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 2940
Score = 136 (52.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G Y LGHG+++ P+ VQ L K I +ATG +EDG+VY++
Sbjct: 3024 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 3083
Query: 336 GCGESASLG 344
G + LG
Sbjct: 3084 GDNDEGQLG 3092
Score = 135 (52.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G+V+S+G G+LG G +E P+ I L ++ ++ +G
Sbjct: 1974 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2033
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
V+ +GK + +G V PQ+VE L+ +V A+G ++ G+VY +
Sbjct: 2034 VVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY--A 2089
Query: 175 WG-ND-ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
WG ND + G+ T + +P + G LE + ++
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRV 2123
Score = 133 (51.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX 94
L G+ C+ E G S+A+T GVV+++G +LGHG+ +P+ + L
Sbjct: 2011 LNGQGVCQIE-----CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 2065
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+ ++D+GQVYA+G + G+ G T + P LV+ L+ + +
Sbjct: 2066 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEGQKITRV 2123
Query: 155 AIGN 158
A G+
Sbjct: 2124 ACGS 2127
Score = 38 (18.4 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 277 DGRVCTWGW 285
DG V WGW
Sbjct: 2504 DGSVNGWGW 2512
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 186 (70.5 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 61/236 (25%), Positives = 94/236 (39%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG-RVYTFS 174
V ++G+ G+ +G + SP + +L +V G T S+ G VY++
Sbjct: 36 VCSWGRGEDGQLGHGDAEDR--PSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWG 93
Query: 175 WGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXX 234
WG+ RLGH + P P+ L I + QI + V S
Sbjct: 94 WGDFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVTMEGE---VQSWGRNQN 149
Query: 235 XXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHG 294
D P+ I+ F+ + ++ +DG + WGWGRYG LG G
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT--EDGDLYGWGWGRYGNLGLG 207
Query: 295 NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
+ VP+ V + K VA G T VS G +Y++G + LGH + D
Sbjct: 208 DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 263
Score = 184 (69.8 bits), Expect = 7.7e-20, Sum P(2) = 7.7e-20
Identities = 49/161 (30%), Positives = 74/161 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q G H +AVT +G V S+G N +GQLG G TE+ P+ I++
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G +Y +G +G G + +LV P+ V S + A G T +S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVSY 241
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G +YT+ W +LGH + + PH L L N + QI
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKL-EALSNSFISQI 281
Score = 166 (63.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 39/149 (26%), Positives = 72/149 (48%)
Query: 51 GPGHSIAVTSKGV-VYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
G H++A + G+ VYS+G G+LGHG + + + P PI++L +
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G+V ++G++ G+ G LV PQ +++ + I + A G TA ++ +G
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGT 198
+Y + WG LG + + P + T
Sbjct: 193 LYGWGWGRYGNLGLGDRTDRLVPERVTST 221
Score = 156 (60.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 41/130 (31%), Positives = 63/130 (48%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG HS+A+ S +V S+G GQLGHG E+ P + +L T+
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVA 81
Query: 110 ISDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
S +G +VY++G FG +G + L T P +++L I + Q A G+ ++ EG
Sbjct: 82 YSQSGMEVYSWGWGDFGRLGHG-NSSDLFT-PLPIKALHGIRIKQIACGDSHCLAVTMEG 139
Query: 169 RVYTFSWGND 178
V SWG +
Sbjct: 140 EVQ--SWGRN 147
Score = 149 (57.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 38/137 (27%), Positives = 63/137 (45%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
S G H+I+V+ G +Y++G + GQLGHG E+ P + +L
Sbjct: 227 SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWR 286
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
TM ++ G++Y +G + FG+ GV SP V + VVQ + G T ++
Sbjct: 287 HTMALTSDGKLYGWGWNKFGQV--GVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 344
Query: 166 REGRVYTFSWGNDARLG 182
V+ + G + +LG
Sbjct: 345 ERNNVFAWGRGTNGQLG 361
Score = 132 (51.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 276 QDG-RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
Q G V +WGWG +G LGHGN P ++AL+ ++ +A GD V+ +G+V S
Sbjct: 84 QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 143
Query: 335 FGCGESASLGHNAIADGQV 353
+G ++ LG D V
Sbjct: 144 WGRNQNGQLGLGDTEDSLV 162
Score = 116 (45.9 bits), Expect = 7.7e-20, Sum P(2) = 7.7e-20
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG++ WGW ++G +G GN + P V+ +D K + V+ G T V+E +V+++G
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
Query: 337 CGESASLG 344
G + LG
Sbjct: 354 RGTNGQLG 361
Score = 111 (44.1 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + T+GW +YG LGHG+ E +P ++AL++ ++ G T ++ DG +Y +G
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGW 302
Query: 338 GESASLG 344
+ +G
Sbjct: 303 NKFGQVG 309
Score = 59 (25.8 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALN 309
V WG G G LG G + PK+++AL+
Sbjct: 349 VFAWGRGTNGQLGIGESVDRNFPKIIEALS 378
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 247 (92.0 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 82/311 (26%), Positives = 131/311 (42%)
Query: 39 ACC---RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXX 95
+CC R + G HS+ + G VY+ GSNS GQLGH RP + +L
Sbjct: 27 SCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGS--RPELVGALDAQ 84
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
++ +++ GQV+A+G G+ G + V P+L++ L + Q
Sbjct: 85 KISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT-AEEAVRVPRLIKKLCEHRISQVM 143
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQIXXXXXXX 214
GN LS++G+++ + + +LG EP+ + P PL +L IP+ QI
Sbjct: 144 CGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLK-SLCGIPLTQISAGGDHS 202
Query: 215 XXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXX 274
SG AV+ D P I+ F L + +
Sbjct: 203 FALSF--SG-AVFGWGKNSAGQLGLNDEQDRAVPCHIK-F-LRSQKVVYISCGEEHTAAL 257
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVY 333
++G + T+G G G LGH + E +P+ V L + +A G ++T V G +Y
Sbjct: 258 TKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIY 317
Query: 334 SFGCGESASLG 344
+FGC LG
Sbjct: 318 AFGCNTQGQLG 328
Score = 138 (53.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 43/159 (27%), Positives = 66/159 (41%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
++ C +Q AG HS A++ G V+ +G NS+GQLG ++ P I+ L
Sbjct: 185 KSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKV 244
Query: 98 XXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
T ++ G ++ FG S G+ G T+ P+ V L V Q A G
Sbjct: 245 VYISCGEEHTAALTKEGGLFTFGNGSKGQL--GHDSTRNEPLPRRVMELMGTEVSQIACG 302
Query: 158 -NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
N A + G +Y F +LG + P P+
Sbjct: 303 RNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPV 341
Score = 111 (44.1 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG G LG +E+ +VP ++ L K ++++ G+ T ++++G +++FG
Sbjct: 209 GAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGN 268
Query: 338 GESASLGHNA 347
G LGH++
Sbjct: 269 GSKGQLGHDS 278
Score = 92 (37.4 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 31/134 (23%), Positives = 58/134 (43%)
Query: 67 FGSNSSGQLGHGTTEEE-WRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFG 125
+GS+ +GQLG G +E + PR ++ + G VY G +S G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+ + G++ P+LV +L + + G + ++ +G+V+ + G+ +LG T
Sbjct: 65 QLGHDKGGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT 120
Query: 186 EPNDVEPHPLLGTL 199
V L+ L
Sbjct: 121 AEEAVRVPRLIKKL 134
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 240 (89.5 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 76/299 (25%), Positives = 124/299 (41%)
Query: 49 IAGPGHSIAVTSK-GVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLXXXXXXXXXXXXX 105
IAG S+ + S+ G VY+ G ++G+LG G T P P+
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGK 3083
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++ G+V+++G+ G+ +G + T + P+LVE+L+ + A G+ +A +S
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 225
+G +YT+ G RLGH ++P L+ L VVQ+ G A
Sbjct: 3142 SQGELYTWGLGEYGRLGHGDNTTQLKPK-LVTALAGRRVVQVACGSRDAQTLALTEDG-A 3199
Query: 226 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 285
V+S P IE+ + + G V TWG
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRA--GEVWTWGK 3257
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G Y LGHG ++ P+ + L + IHVA G V++ G VY++G + G
Sbjct: 3258 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316
Score = 231 (86.4 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 68/246 (27%), Positives = 116/246 (47%)
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
A +Y +G + G+ G++G+++ T P E+L + VQ A G ++ +G+++
Sbjct: 4048 ASTIYGWGHNHRGQLG-GLEGSRIKT-PTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 4105
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXX 232
+G+ RLG + P LLG+L+++ V ++ G VY+
Sbjct: 4106 TGYGSGGRLGVGGSDSWAIP-TLLGSLQHVFVKKVAVNSGGKHCLALTTEG-EVYAWGEG 4163
Query: 233 XXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLG 292
+R P+L+E +++ G V TWG GRYG LG
Sbjct: 4164 EDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITAS--GHVLTWGKGRYGRLG 4221
Query: 293 HGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
HG+ E + PK+V+AL +AI +A +GD T +++D +V+S+G G+ LG +D
Sbjct: 4222 HGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-SD 4280
Query: 351 GQVCSL 356
G C L
Sbjct: 4281 G--CKL 4284
Score = 214 (80.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 70/287 (24%), Positives = 112/287 (39%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDS 123
+Y +G N GQLG P P +L ++ G+++A G S
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4110
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI--GNFFTAVLSREGRVYTFSWGNDARL 181
G GV G+ P L+ SL+++FV + A+ G L+ EG VY + G D +L
Sbjct: 4111 GGRL--GVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4168
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXS 241
GH + P L+ L + V I SG V +
Sbjct: 4169 GHGNRMSYDRPK-LVEHLNGMSVADIACGSAHSAAITA--SGH-VLTWGKGRYGRLGHGD 4224
Query: 242 RTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESV 301
D+ P+L+E D V +WG G YG LG G + +
Sbjct: 4225 SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKL 4284
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
P +++L + + V G + +++ G VY++G G+ LGH ++
Sbjct: 4285 PYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV 4331
Score = 190 (71.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 66/312 (21%), Positives = 117/312 (37%)
Query: 36 AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXX 95
AG + +A A P + T V +G N QLG + P +++
Sbjct: 2964 AGAGAVSTSHEEAAAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL 3019
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
++S G+VYA G+ + G GV T V P + L+ V + A
Sbjct: 3020 RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV--THNVPLPHQLPVLRQYVVKKVA 3077
Query: 156 I--GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXX 213
+ G L+ +G+V+++ G D +LGH +P L+ L + +
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR-LVEALRAKKIRDVACGSSH 3136
Query: 214 XXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXX 273
Q +Y+ T + P+L+ +
Sbjct: 3137 SAAISSQGE---LYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLA 3193
Query: 274 XGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+DG V +WG G +G LG G E P ++ L+ + + + G + ++ G+V+
Sbjct: 3194 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 3253
Query: 334 SFGCGESASLGH 345
++G G+ LGH
Sbjct: 3254 TWGKGDYYRLGH 3265
Score = 176 (67.0 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 65/280 (23%), Positives = 109/280 (38%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G H +A+T++G VY++G G+LGHG RP+ + L +
Sbjct: 4143 SGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAA 4202
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN--FFTAVLSRE 167
I+ +G V +GK +G +G +L P+LVE+L + A G+ T ++ +
Sbjct: 4203 ITASGHVLTWGKGRYGRLGHGDSEDQL--RPKLVEALLGYRAIDIACGSGDAQTLCITDD 4260
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V+++ G+ +LG P+ + +L + VV++ SG AVY
Sbjct: 4261 DNVWSWGDGDYGKLGRGGSDGCKLPYKI-ESLAGLGVVKVECGSQFSVALTK--SG-AVY 4316
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ S + P+ + Q + G V TWG
Sbjct: 4317 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI--ISIATGSLHCVACSDSGEVYTWGDND 4374
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVS 327
G LG G P++V AL + V G T +S
Sbjct: 4375 EGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 161 (61.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 51/160 (31%), Positives = 79/160 (49%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
+G HS+A+TS+G+V+++G G+LG+G +P + SL ++
Sbjct: 729 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQF--SVA 786
Query: 110 ISDAGQVYAFGKDS-FGE--AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+S GQ+Y +GK + G E VQG + P+LV SL++ +V A+ LS
Sbjct: 787 LSSEGQLYTWGKATCLGHQLVERSVQGCSV---PRLVSSLQHKRIVDVAVSVAHCLALSS 843
Query: 167 EGRVYTFSWG-NDARLGHHTEPNDVEPHPLLGT--LENIP 203
G V F WG ND++ P V PLL T L ++P
Sbjct: 844 SGEV--FGWGRNDSQ---QICPASVSSEPLLRTPILVSLP 878
Score = 138 (53.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 45/162 (27%), Positives = 77/162 (47%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXX--XXTM 108
G +S A+T G + ++G + +LGHG +++ P + +L ++
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 735
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++ G V+A+G +G+ G L P LVESL + V A G+ F+ LS EG
Sbjct: 736 ALTSEGLVFAWGDGDYGKLGNGNCNGSL--QPILVESLPRVQRVFA--GSQFSVALSSEG 791
Query: 169 RVYTFSWGNDARLGHHTEPNDVE--PHP-LLGTLENIPVVQI 207
++YT WG LGH V+ P L+ +L++ +V +
Sbjct: 792 QLYT--WGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDV 831
Score = 137 (53.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVA--TGDYTTFVVSEDGDVYSF 335
G + TWG G Y LGHGN + S+P +V AL+D + VA +GD + ++ +G V+++
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746
Query: 336 GCGESASLGHNAIADGQVCSLLFLSI 361
G G+ LG N +G + +L S+
Sbjct: 747 GDGDYGKLG-NGNCNGSLQPILVESL 771
Score = 126 (49.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G V TWG G + LGHG+ + PK V AL K I +ATG S+ G+VY++
Sbjct: 4311 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTW 4370
Query: 336 GCGESASLGHNAI 348
G + LG +
Sbjct: 4371 GDNDEGQLGDGTV 4383
Score = 83 (34.3 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR----PRPIRSLXXXXXXXXXX 102
+ AG S+A++S+G +Y++G + LGH E + PR + SL
Sbjct: 776 RVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAV 833
Query: 103 XXXXTMLISDAGQVYAFGK-DSFGEAEYGVQGTKLVTSPQLV 143
+ +S +G+V+ +G+ DS V L+ +P LV
Sbjct: 834 SVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILV 875
Score = 55 (24.4 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G+V WG +G G GN P +V L+ V VA G
Sbjct: 3302 GQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3343
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVT-SPQL--VESLKNIFVV-QAAIGNFFTAVLSREGRV 170
++YA G S + + G ++ S + V +L F + Q A +LS+EG++
Sbjct: 534 RIYALGWPSLSKDQQGFSAEPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKL 593
Query: 171 YTF 173
YT+
Sbjct: 594 YTW 596
Score = 39 (18.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 338 GESASLGHNAIADGQVCSLL 357
G+++S GH + D V SL+
Sbjct: 1033 GQASSAGHRFMTDLLVSSLM 1052
Score = 37 (18.1 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 8/37 (21%), Positives = 22/37 (59%)
Query: 336 GCGESASLGHNAIADGQVCSLLFLSIFQYLQIWLNLS 372
G GE+ + + D + S+L +++F++L + + ++
Sbjct: 4596 GRGEAGANRDCFLLDPTLSSVLQMNMFRFLGVLMGIA 4632
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 244 (91.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 80/306 (26%), Positives = 129/306 (42%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX 102
R + G HS+ + G VY+ G N+ GQLGH E +P I +L
Sbjct: 34 RSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIVHVAC 91
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +SD GQ++++G S G+ G+ + V P+L++ L ++Q + GN+
Sbjct: 92 GESHSLALSDQGQLFSWGAGSDGQL--GLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
L+ +G+ +T+ + +LG E P+ P + +LE IP+ Q+
Sbjct: 150 LALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQVVAGGAHSFALSL- 207
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGR 279
SG AV+ D + P ++ LL Q + G
Sbjct: 208 -SG-AVFGWGMNNAGQLGLSDEKDRESPCHVK---LLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G +T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 ARGQLG 328
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q +AG HS A++ G V+ +G N++GQLG ++ P ++ L
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/217 (25%), Positives = 86/217 (39%)
Query: 131 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
+QG +V PQ+ + + V + A G + L +G VYT +LGH E N
Sbjct: 18 LQG--IVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP 75
Query: 191 EPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKH-PR 249
E +G L + +V + Q G ++S + D PR
Sbjct: 76 EQ---IGALADQHIVHVACGESHSLALSDQ--GQ-LFSWGAGSDGQLGLMTIEDSVAVPR 129
Query: 250 LIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQA 307
LI++ LN Q DG+ TWG +G LG G E ++ P+ V++
Sbjct: 130 LIQK---LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS 186
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
L + V G +F +S G V+ +G + LG
Sbjct: 187 LEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG G LG +E+ P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 338 GESASLGHNAIAD 350
G LGH+++ D
Sbjct: 269 GSCGQLGHDSMND 281
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 242 (90.2 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 83/318 (26%), Positives = 132/318 (41%)
Query: 27 WKLVLRFLLAGEACCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW 84
W+ R L C N+ QA +G HS+ + S G V S G NS GQLG T
Sbjct: 5 WRAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE 64
Query: 85 RPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLV 143
+P I +L ++ + G+V+A+G S E + G+ K T P+ +
Sbjct: 65 QPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKI 122
Query: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLE 200
++L I ++Q A G++ + LS +G+V FSWG ++ +LG E P+ P + +LE
Sbjct: 123 KTLAGIKIIQVACGHYHSVALSEDGQV--FSWGTNSHGQLGLGKEFPSQASPQRVR-SLE 179
Query: 201 NIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQ 260
IP+ Q+ + S + P I + L +
Sbjct: 180 GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVV 239
Query: 261 PXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
QDG+V T+G YG LGH + P++V+ + + + D
Sbjct: 240 SISCGYKHTAVLT--QDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSD 297
Query: 321 YTTFVVSEDGDVYSFGCG 338
+T + G V SFG G
Sbjct: 298 HTLAYIYTTGQVVSFGRG 315
Score = 204 (76.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 77/290 (26%), Positives = 128/290 (44%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLXXXXXXXXXXXXXXTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I++L ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S+ GQV+++G +S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGHHSFALSLSGT 201
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPH-PL-LGTLENIPVVQIXXXXXXXXXXXXQPSGMA 225
+F WG+++ +L V+ + P+ +G L+ + VV I
Sbjct: 202 --SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGK--- 256
Query: 226 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 285
V++ +++ P+L+E+ + L Q G+V ++G
Sbjct: 257 VFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYT--TGQVVSFGR 314
Query: 286 GRYGCLG---HGNEECESVPKVVQA--LNDVKAIHVATGDYTTFVV-SED 329
G GC H E + +V A L DV+ H+ G Y FV S+D
Sbjct: 315 GP-GCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQD 363
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 278 GRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GRV WG G LG G +E +PK ++ L +K I VA G Y + +SEDG V+S+G
Sbjct: 94 GRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG 153
Query: 337 CGESASLG 344
LG
Sbjct: 154 TNSHGQLG 161
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 242 (90.2 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 80/306 (26%), Positives = 131/306 (42%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX 102
R + G HS+ + G VY+ G N+ GQLGH + E +P + +L
Sbjct: 34 RNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHES--EGSKPAWVGTLAGQHIVHVAC 91
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFT 161
++ +SD GQV+++G S G+ G+ + VT P+L++ L ++Q + GN+
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQL--GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHC 149
Query: 162 AVLSREGRVYTFSWGNDARLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQ 220
L+ +G+ +T+ + +LG E P+ P + +L+ IP+ Q+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVK-SLDGIPLAQVAAGGAHSFALSL- 207
Query: 221 PSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX-XXXXXXXXGQDGR 279
SG AV+ D + P ++ LL Q + G
Sbjct: 208 -SG-AVFGWGKNSSGQLGLSDERDRESPCHVK---LLRSQKVVYISCGEEHTAVLTKSGG 262
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCG 338
V T+G G G LGH + E P+ V L + +A G + T V G +Y+FGCG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 TRGQLG 328
Score = 178 (67.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 72/261 (27%), Positives = 109/261 (41%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXXXTML 109
G HS+A++ +G V+S+G+ S GQLG T E+ PR I+ L +
Sbjct: 92 GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQ + +G++S+G+ G + SPQ V+SL I + Q A G + LS G
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPSQA-SPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 210
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEP-HPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 226
V F WG ++ +LG E + P H L L + VV I SG V
Sbjct: 211 V--FGWGKNSSGQLGLSDERDRESPCHVKL--LRSQKVVYISCGEEHTAVLTK--SG-GV 263
Query: 227 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXX-XXXXXXXXXGQDGRVCTWGW 285
++ S DE +PR + +L+ + G + +G
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 286 GRYGCLGHG---NEECESVPK 303
G G LG G N +C S K
Sbjct: 322 GTRGQLGTGHTCNVKCPSPVK 342
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/230 (27%), Positives = 95/230 (41%)
Query: 119 FGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+G SFG+ G ++ PQ+ + + V + A G + L +G VYT
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXX 238
+LGH +E + +P +GTL +V + Q G V+S
Sbjct: 64 GQLGHESEGS--KP-AWVGTLAGQHIVHVACGESHSVALSDQ--GQ-VFSWGAGSDGQLG 117
Query: 239 XXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXX-XXXGQDGRVCTWGWGRYGCLGHGNE 296
+ D PRLI++ LN Q DG+ TWG YG LG G +
Sbjct: 118 LTTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG-K 173
Query: 297 ECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
EC S P+ V++L+ + VA G +F +S G V+ +G S LG
Sbjct: 174 ECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/153 (28%), Positives = 67/153 (43%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q AG HS A++ G V+ +G NSSGQLG + P ++ L
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVSQIACGRHHTLAFV 310
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 311 PSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 190 (71.9 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 43/143 (30%), Positives = 75/143 (52%)
Query: 46 SQAIAGP--GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX 103
S ++GP HS+ +T++G ++S+G N GQLGHG T+ P+ I L
Sbjct: 124 SCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACG 183
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
T+ +++ G VY FG++ G+ G Q T V SP ++ +V+ A G F+ +
Sbjct: 184 RNHTLALTENGTVYTFGENKLGQLGQGNQ-TDAVLSPATIQ-YNGQPIVKVACGAEFSMI 241
Query: 164 LSREGRVYTFSWGNDARLGHHTE 186
+ +G +Y+F +LGH+++
Sbjct: 242 VDCKGNLYSFGCPEYGQLGHNSD 264
Score = 119 (46.9 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLXXXXXXXXXXXXXX 106
A G H++A+T G VY+FG N GQLG G T+ P I+
Sbjct: 180 AACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEF 238
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+M++ G +Y+FG +G+ + G K + Q +E
Sbjct: 239 SMIVDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIE 275
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
++G V T+G + G LG GN+ + P +Q N + VA G + +V G++YS
Sbjct: 192 ENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 335 FGCGESASLGHNAIADGQ 352
FGC E LGHN+ DG+
Sbjct: 251 FGCPEYGQLGHNS--DGK 266
Score = 114 (45.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 28/101 (27%), Positives = 52/101 (51%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+++I+ G+++++G++ G+ +G TK + +P+L+E L +V AA G T L+
Sbjct: 135 SLIITTEGKLWSWGRNDKGQLGHG--DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE 192
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G VYTF +LG + D P P+V++
Sbjct: 193 NGTVYTFGENKLGQLGQGNQ-TDAVLSPATIQYNGQPIVKV 232
Score = 96 (38.9 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
RV +WG+G YG LGH ++ E VP++V+ + A + G +F +SE G ++ +G
Sbjct: 323 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWG 382
Score = 67 (28.6 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
N+ A G T VL + RV+++ +G RLGH + +++ P
Sbjct: 302 NVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 346
Score = 55 (24.4 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
+V A VA G T V+ V+S+G G LGH D V L+ L F
Sbjct: 302 NVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 354
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 187 (70.9 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 43/134 (32%), Positives = 74/134 (55%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I +L T+ ++D
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G V+AFG++ G+ G Q T V SP Q++ + + I + A G F+ ++ +G +Y+
Sbjct: 219 GSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYNGQPI--TKMACGAEFSMLMDCKGNLYS 275
Query: 173 FSWGNDARLGHHTE 186
F +LGH+++
Sbjct: 276 FGCPEYGQLGHNSD 289
Score = 112 (44.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX-XXXX 106
A G H++A+T G V++FG N GQLG G + + P P + +
Sbjct: 205 AACGRNHTLALTDTGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEF 263
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+ML+ G +Y+FG +G+ + G K + Q +E
Sbjct: 264 SMLMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIE 300
Score = 99 (39.9 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
RV +WG+G YG LGH ++ E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 348 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 83 (34.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 42/185 (22%), Positives = 69/185 (37%)
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
N+ V A G T VL + RV+++ +G RLGH E D E P L L + P
Sbjct: 327 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH-AEQKD-EMVPRLVKLFDFP---- 380
Query: 208 XXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXX 267
AV V SR +P+ ++ ++
Sbjct: 381 --GRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKS 438
Query: 268 XXXXXXXGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTF 324
D +WG +G LG+G+ + +S + V+ L+ + + VA G +
Sbjct: 439 SIIVAA---DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 495
Query: 325 VVSED 329
V++ D
Sbjct: 496 VIARD 500
Score = 52 (23.4 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
VA G T V+ V+S+G G LGH D V L+ L F
Sbjct: 333 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 379
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 166 (63.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 47/166 (28%), Positives = 80/166 (48%)
Query: 21 QKCGGSWKLVLRFLL--AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG 78
++ G S+ + + LL A E+ + G H++ VT +G +S+G S G+LGHG
Sbjct: 284 RRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG 343
Query: 79 TTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT 138
+P+ I +L + ++ +G +Y +GK FG +G + + V
Sbjct: 344 VDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV- 402
Query: 139 SPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
P+ V L + I V A G + TAV++ G+++TF G LGH
Sbjct: 403 -PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 447
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 60 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAF 119
S G ++++G G+LGHG E + P + +L T+ ++ +G VY
Sbjct: 494 SSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTM 553
Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
G +G+ K +P VE L FV + A G + AVL+ VYT+ G++
Sbjct: 554 GSPVYGQLGNSHADGK---TPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSN 610
Query: 179 ARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
RLGH + +D L+ +L++ V I
Sbjct: 611 GRLGHG-DVDDRNSPTLVESLKDKQVKSI 638
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 37/103 (35%), Positives = 50/103 (48%)
Query: 246 KHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV 305
+ P+LI+ N++ D + TWG G +G LGHGNE VPK V
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGD--LYTWGKGDFGVLGHGNEVSHWVPKRV 406
Query: 306 QALNDVKAIHV---ATGDYTTFVVSEDGDVYSFGCGESASLGH 345
L ++ IHV A G Y T VV+ G +++FG G LGH
Sbjct: 407 NFL--LEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 447
Score = 135 (52.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 46/162 (28%), Positives = 69/162 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
S GP H+ VTS G +++FG + G LGHG + + PR + SL
Sbjct: 416 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 475
Query: 106 XTMLISD------------AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQ 153
T + + +G+++ +G G +G + KLV P V +L Q
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQ 533
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGH-HTE---PNDVE 191
A G+ T L+ G VYT +LG+ H + PN VE
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVE 575
Score = 128 (50.1 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G++ TWG G G LGHGN+E + VP V AL + VA G T ++ G VY+ G
Sbjct: 496 GKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS 555
Query: 338 GESASLGHNAIADGQ 352
LG N+ ADG+
Sbjct: 556 PVYGQLG-NSHADGK 569
Score = 119 (46.9 bits), Expect = 0.00083, P = 0.00083
Identities = 37/114 (32%), Positives = 53/114 (46%)
Query: 53 GHS--IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
GHS +A+T+ G VY+ GS GQLG+ + + R L ++
Sbjct: 537 GHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVL 596
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +VY +GK S G +G + SP LVESLK+ V A G FTA +
Sbjct: 597 TSRTEVYTWGKGSNGRLGHGDVDDR--NSPTLVESLKDKQVKSIACGTNFTAAV 648
Score = 112 (44.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 40/172 (23%), Positives = 71/172 (41%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSN-SSGQLGHGTTE---------EEWRPRPIRSLXXX 95
S + G GH + G V+ +G G LG G + P+ + S
Sbjct: 250 SSSSHGSGHDDG-DALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVL 308
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+L++ G+ +++G++S G +GV + P+L+++L + A
Sbjct: 309 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVA 366
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G F + ++ G +YT+ G+ LGH E + P + LE I V I
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSI 418
Score = 97 (39.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE--------- 328
G++ T+G G +G LGHG+++ +P+ V +L ++ + A G + T V E
Sbjct: 432 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 491
Query: 329 ---DGDVYSFGCGESASLGH 345
G ++++G G+ LGH
Sbjct: 492 NCSSGKLFTWGDGDKGRLGH 511
Score = 87 (35.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V T G YG LG+ + + ++ +V L+ +A G Y V++ +VY++G
Sbjct: 548 GHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 607
Query: 338 GESASLGHNAIAD 350
G + LGH + D
Sbjct: 608 GSNGRLGHGDVDD 620
Score = 81 (33.6 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ + + P +V++L D + +A G ++T V
Sbjct: 602 VYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 184 (69.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 42/134 (31%), Positives = 73/134 (54%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS+ +T++G ++S+G N GQLGHG T+ PR I L T+ +++
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 220
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
G V+AFG++ G+ G Q T V SP Q++ + + I + A G F+ ++ +G +Y+
Sbjct: 221 GSVFAFGENKMGQLGLGNQ-TDAVPSPAQIMYNGQPI--TKMACGAEFSMIMDCKGNLYS 277
Query: 173 FSWGNDARLGHHTE 186
F +LGH+++
Sbjct: 278 FGCPEYGQLGHNSD 291
Score = 112 (44.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXT 107
A G H++A+T G V++FG N GQLG G + + P P + +
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACGAEF 265
Query: 108 MLISDA-GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE 144
+I D G +Y+FG +G+ + G K + Q +E
Sbjct: 266 SMIMDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIE 302
Score = 98 (39.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYSFG 336
RV +WG+G YG LGH ++ E VP++V+ + A + G +F VSE G ++ +G
Sbjct: 350 RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 83 (34.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 42/185 (22%), Positives = 69/185 (37%)
Query: 148 NIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
N+ V A G T VL + RV+++ +G RLGH E D E P L L + P
Sbjct: 329 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH-AEQKD-EMVPRLVKLFDFP---- 382
Query: 208 XXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXX 267
AV V SR +P+ ++ ++
Sbjct: 383 --GRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKS 440
Query: 268 XXXXXXXGQDGRVCTWGWG-RYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTF 324
D +WG +G LG+G+ + +S + V+ L+ + + VA G +
Sbjct: 441 SIIVAA---DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 497
Query: 325 VVSED 329
V++ D
Sbjct: 498 VIARD 502
Score = 52 (23.4 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIF 362
VA G T V+ V+S+G G LGH D V L+ L F
Sbjct: 335 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDF 381
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 187 (70.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 41/150 (27%), Positives = 74/150 (49%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX 102
EN + IA G H++A+ G ++++G+N GQLG G T+ P P++ L
Sbjct: 196 ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAA 255
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
+ +++ G+VY +G+ G +G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
L+R+GR+++F G+ RLG+ + +P
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 146 (56.5 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDS 123
V ++GS GQLG GT EE+ + +L ++ I D G+++ +G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
G + + TK ++P LV+SL N+ +VQAAIG + + +GR Y +WG +
Sbjct: 67 RGTLGHPPE-TKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY--AWGGN 118
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 277 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG++ TWGW + G LGH E + ES P +V++L +VK + A G + V + G Y++
Sbjct: 56 DGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAW 115
Query: 336 GCGESASLGHNAIAD 350
G E G D
Sbjct: 116 GGNEYGQCGEEPSKD 130
Score = 131 (51.2 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG + WG YG LG G+ + S P VQ L+D+ + +A G + + ++ +G+VY +
Sbjct: 213 EDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGW 272
Query: 336 GCGESASLG 344
G GE LG
Sbjct: 273 GRGEHGRLG 281
Score = 128 (50.1 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 37/136 (27%), Positives = 64/136 (47%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLXXXXXXXXXXXXXXT 107
+ G +S+A+ G ++++G N G LGH T+ E P ++SL
Sbjct: 44 VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-------KNIFVVQAAIGNFF 160
+ + D G+ YA+G + +G+ G + +K T + + + + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQC--GEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTH 161
Query: 161 TAVLSREGRVYTFSWG 176
+ VL+REG V+T WG
Sbjct: 162 SVVLTREGYVWT--WG 175
Score = 120 (47.3 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 45/171 (26%), Positives = 81/171 (47%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RP--R----PIRSLXXXXXXX 99
QA G H +AV +G Y++G N GQ G +++E RP R P R
Sbjct: 95 QAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQ 154
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+++++ G V+ +G+ + K ++ P V+ L+N+ ++ A+G F
Sbjct: 155 VAAGGTHSVVLTREGYVWTWGQP------WPPGDIKQISVPVRVQGLENVRLI--AVGAF 206
Query: 160 FTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQI 207
L +G ++ +WGN+ +LG T+P P P+ G L+++ +V I
Sbjct: 207 HNLALKEDGTLW--AWGNNEYGQLGTGDTQPRSY-PIPVQG-LDDLTLVDI 253
Score = 110 (43.8 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+G V WG G +G LG G+ + S +P+ V L I V+ G + ++ DG ++S
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 335 FGCGESASLGHNA-IADGQVCSL 356
FG G+ LG+ + GQ L
Sbjct: 326 FGRGDHGRLGYGRKVTTGQPLEL 348
Score = 91 (37.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 25/98 (25%), Positives = 49/98 (50%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV-LSREG 168
++ A V A+G G+ G K + S +V++L+ F V++ +G ++ + +G
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELAS--VVDALEP-FNVRSVVGGSRNSLAICDDG 57
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+++T+ W LGH E L+ +L N+ +VQ
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQ 95
Score = 76 (31.8 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 276 QDGRVCTWG--WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
++G V TWG W G+ + SVP VQ L +V+ I A G + + EDG ++
Sbjct: 167 REGYVWTWGQPWPP------GDIKQISVPVRVQGLENVRLI--AVGAFHNLALKEDGTLW 218
Query: 334 SFGCGESASLG 344
++G E LG
Sbjct: 219 AWGNNEYGQLG 229
Score = 53 (23.7 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVP 302
+DGR+ ++G G +G LG+G + P
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQP 345
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 157 (60.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 44 ENS-QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
E+S + IA G HS+A+T +G V+++G G LGH E PR +
Sbjct: 151 EHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIA 210
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGV---QGTKL---VTSPQLVESLKNIFVVQAA 155
T I+++G++Y +G++ G+ G+ +G ++ P V++L + V +
Sbjct: 211 TSGTHTAAITESGELYMWGREE-GDGRLGLGPGRGPNEGGGLSVPSKVKAL-TVPVASVS 268
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G FFT L++EG+++ + ++ LG EP P+ +LE + + QI
Sbjct: 269 CGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPV-PSLEGVRITQI 319
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 33/130 (25%), Positives = 65/130 (50%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAG 114
++A+T +G ++++G+NS+ +LG G W P P+ SL ++ +++ G
Sbjct: 274 TMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEG 333
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174
+V ++G G + G + P +E+L + +V A G +A ++ G ++
Sbjct: 334 KVLSWGHG--GHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWM-- 389
Query: 175 WGN--DARLG 182
WGN D +LG
Sbjct: 390 WGNAKDFQLG 399
Score = 114 (45.2 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 20/69 (28%), Positives = 42/69 (60%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G+V +WG G +G LG + + VP ++AL D K + +A+G ++ +++ G+++ +
Sbjct: 331 EEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMW 390
Query: 336 GCGESASLG 344
G + LG
Sbjct: 391 GNAKDFQLG 399
Score = 114 (45.2 bits), Expect = 0.00093, P = 0.00093
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 48 AIAGPG-HSIAVTSKGVVYSFG-SNSSGQLG----HGTTEEEWR--PRPIRSLXXXXXXX 99
AIA G H+ A+T G +Y +G G+LG G E P +++L
Sbjct: 208 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 267
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESLKNIFVVQAAIGN 158
TM ++ GQ++ +G +S E G +G L P V SL+ + + Q A G
Sbjct: 268 SCGGFF-TMALTKEGQLWNWGANS--NYELG-RGDNLGGWEPMPVPSLEGVRITQIACGG 323
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
+ + L+ EG+V ++ G +LG + N P
Sbjct: 324 YHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVP 357
Score = 105 (42.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V TWG+G +G LGH E VP+ V D K +AT T ++E G++Y +G
Sbjct: 171 GDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWG 229
Score = 96 (38.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG + WG G G LG G E VP + + +A G + ++ GDV+++G
Sbjct: 118 DGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWG 177
Query: 337 CGESASLGH 345
G +LGH
Sbjct: 178 YGGFGALGH 186
Score = 93 (37.8 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G++ WG LG G+ P V +L V+ +A G Y + ++E+G V S+
Sbjct: 279 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 338
Query: 336 GCGESASLGHNAIADGQV 353
G G LG +++ + +V
Sbjct: 339 GHGGHGQLGSSSLRNQKV 356
Score = 84 (34.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 31/132 (23%), Positives = 52/132 (39%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS +T G ++ +G G+LG G + P ++ ++
Sbjct: 112 HS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQ 170
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G V+ +G FG + V +LV P+ V+ + + A TA ++ G +Y
Sbjct: 171 GDVFTWGYGGFGALGHKVYTRELV--PRRVDDSWDCKISAIATSGTHTAAITESGELYM- 227
Query: 174 SWGN---DARLG 182
WG D RLG
Sbjct: 228 -WGREEGDGRLG 238
Score = 61 (26.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSL 92
++S+G +SGQLG G E P P+ +L
Sbjct: 50 LFSWGRGASGQLGGGIEEIRMYPSPVANL 78
Score = 40 (19.1 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 6/26 (23%), Positives = 17/26 (65%)
Query: 115 QVYAFGKDSFGEAEYGVQGTKLVTSP 140
Q++++G+ + G+ G++ ++ SP
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSP 74
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 183 (69.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX 102
EN + IA G H++A+ G + ++G+N GQLG G T+ P P++ L
Sbjct: 196 ENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAA 255
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
+ ++D G+VY +G+ G G PQ V L ++Q + G +
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSV 315
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
L+R+GR+++F G+ RLG+ + +P
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 135 (52.6 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DGR+ WG YG LG G+ + S P VQ L+D+ + +A G + + +++ G+VY +
Sbjct: 213 EDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGW 272
Query: 336 GCGESASLG 344
G GE LG
Sbjct: 273 GRGEHGRLG 281
Score = 135 (52.6 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQV 116
VT+ ++ ++GS GQLG GT EE EW + +L ++ I D G +
Sbjct: 2 VTATSII-AWGSGEDGQLGIGTNEEKEWAC-VVEALEPYSVRSVVSGSRNSLAICDDGTM 59
Query: 117 YAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
+ +G + G + + TK P V++L N+ + QAAIG + + +GR Y +WG
Sbjct: 60 FTWGWNQRGTLGHQPE-TKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAY--AWG 116
Query: 177 ND 178
+
Sbjct: 117 GN 118
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 277 DGRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG + TWGW + G LGH E + E++P V+AL +VK A G + V + G Y++
Sbjct: 56 DGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAW 115
Query: 336 GCGESASLGHNAIAD 350
G E G + D
Sbjct: 116 GGNEYGQCGEEPLKD 130
Score = 128 (50.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLXXXXXXXXXXXXXXT 107
++G +S+A+ G ++++G N G LGH T+ E P +++L
Sbjct: 44 VSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHC 103
Query: 108 MLISDAGQVYAFGKDSFGEA-------EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ + D G+ YA+G + +G+ E G + + P+ + V Q A G
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTH 161
Query: 161 TAVLSREGRVYTFSWG 176
+ VL+REG V+T WG
Sbjct: 162 SVVLTREGHVWT--WG 175
Score = 125 (49.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 46/172 (26%), Positives = 81/172 (47%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-RP--R----PIRSLXXXXXX 98
+QA G H +AV +G Y++G N GQ G ++E RP R P R
Sbjct: 94 TQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVR 153
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+++++ G V+ +G+ + K ++ P V+ L+N+ ++ A+G
Sbjct: 154 QVAAGGTHSVVLTREGHVWTWGQP------WPPGDIKQISVPVRVQGLENVRLI--AVGA 205
Query: 159 FFTAVLSREGRVYTFSWGND--ARLGH-HTEPNDVEPHPLLGTLENIPVVQI 207
F L +GR+ +WGN+ +LG T+P P P+ G L+++ +V I
Sbjct: 206 FHNLALEEDGRL--LAWGNNEYGQLGTGDTQPTS-HPVPVQG-LDDLTLVDI 253
Score = 112 (44.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 278 GRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G V WG G +G LG G+ + S VP+ V L + I V+ G + ++ DG ++SF
Sbjct: 267 GEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSF 326
Query: 336 GCGESASLGHNA-IADGQVCSL 356
G G+ LG+ + GQ L
Sbjct: 327 GRGDHGRLGYGRKVTTGQPLEL 348
Score = 74 (31.1 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 276 QDGRVCTWG--WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
++G V TWG W G+ + SVP VQ L +V+ I A G + + EDG +
Sbjct: 167 REGHVWTWGQPWPP------GDIKQISVPVRVQGLENVRLI--AVGAFHNLALEEDGRLL 218
Query: 334 SFGCGESASLG 344
++G E LG
Sbjct: 219 AWGNNEYGQLG 229
Score = 68 (29.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 21/94 (22%), Positives = 37/94 (39%)
Query: 113 AGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 172
A + A+G G+ G K +VE+L+ V G+ + + +G ++T
Sbjct: 4 ATSIIAWGSGEDGQLGIGTNEEKEWAC--VVEALEPYSVRSVVSGSRNSLAICDDGTMFT 61
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQ 206
+ W LGH E + L N+ + Q
Sbjct: 62 WGWNQRGTLGHQPETKTENIPSRVKALANVKITQ 95
Score = 53 (23.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVP 302
+DGR+ ++G G +G LG+G + P
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQP 345
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 185 (70.2 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 49/165 (29%), Positives = 84/165 (50%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA +G HS+ + S VYS G NS GQLG + RP PI++L
Sbjct: 26 QAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEH 85
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ P +++L I ++Q + G++ + LS
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGIG-EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSE 144
Query: 167 EGRVYTFSWGNDAR----LGHHTEPNDVEPHPLLGTLENIPVVQI 207
+G V FSWG ++ LG ++ + P + +LE IP+ Q+
Sbjct: 145 DGHV--FSWGRNSEGQLGLGKNSRSQAI-PQKVK-SLEGIPLAQV 185
Score = 164 (62.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHG-TTEEEWRPRPIRSLXXXXXXXXXXXXX 105
Q G HS+A++ G V+S+G NS GQLG G + + P+ ++SL
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 106 XTMLISDAGQVYAFGKDSFGE-AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G + +G + G+ A G + + + P + +LKN+ V+ + G TAVL
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVL 250
Query: 165 SREGRVYTFSWGNDA 179
+ EG+V+TF GN +
Sbjct: 251 TEEGQVFTFG-GNSS 264
Score = 128 (50.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 38/135 (28%), Positives = 65/135 (48%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLXXXXXXXXXX 102
+Q AG HS A++ G + +GSN SGQL G+ E+ ++P I +L
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
T ++++ GQV+ FG +S G+ + + + PQL+E + V Q ++ T
Sbjct: 243 GYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQ--RGPQLIEGIGGR-VSQIECASYHTI 299
Query: 162 AVLSREGRVYTFSWG 176
A + G+V + G
Sbjct: 300 AYVYTTGQVVSLGRG 314
Score = 123 (48.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 278 GRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G G LG G +E +P ++AL +K I V+ G Y + +SEDG V+S+G
Sbjct: 93 GKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG 152
Query: 337 CGESASLG 344
LG
Sbjct: 153 RNSEGQLG 160
Score = 89 (36.4 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 283 WGWGRYGCLG-HGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
WG R G L GN+ E + P + AL ++ I+++ G T V++E+G V++FG
Sbjct: 204 WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNS 263
Query: 340 SASL 343
S L
Sbjct: 264 SGQL 267
Score = 54 (24.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF---SWGNDARLGHHTEPNDVEPHPL 195
+L I ++QAA G + +L RVY+ SWG +LG + + P P+
Sbjct: 14 RLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWG---QLGQRRDQSTERPEPI 68
Score = 49 (22.3 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 334
++G+V T+G G L + P++++ + + + Y T V G V S
Sbjct: 252 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVS 310
Query: 335 FGCGES 340
G G S
Sbjct: 311 LGRGPS 316
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 166 (63.5 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 46/158 (29%), Positives = 74/158 (46%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXT 107
A+ G H++ T KG VY+ G NS GQLG G TEE I T
Sbjct: 94 AVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYT 153
Query: 108 ML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+++ GQ++ +G +S E + G+ V+ P V+ K + + G + +A ++
Sbjct: 154 SAAVTEDGQLFVWGDNS--EGQIGLADKTCVSVPCQVDVGKPVSSISC--GYYHSAFITG 209
Query: 167 EGRVYTFSWGNDARLGHHTEP--NDVEPHPLLGTLENI 202
+G +YTF + +LG E N P P+LG +E +
Sbjct: 210 DGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKV 247
Score = 150 (57.9 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 38/130 (29%), Positives = 67/130 (51%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H+ VT G +Y FGSN GQLG G+ +P +++L T++
Sbjct: 45 GDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVY 104
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGR 169
++ G VYA G +S E + G+ T+ T+ L+ N + Q A G++ +A ++ +G+
Sbjct: 105 TEKGNVYAAGGNS--EGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQ 162
Query: 170 VYTFSWGNDA 179
+ F WG+++
Sbjct: 163 L--FVWGDNS 170
Score = 114 (45.2 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 41/139 (29%), Positives = 59/139 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG S AVT G ++ +G NS GQ+G ++ P +
Sbjct: 146 QLAAGSYTSAAVTEDGQLFVWGDNSEGQIG--LADKTCVSVPCQVDVGKPVSSISCGYYH 203
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ I+ G++Y FG+ G+ + K PQ V + V + A G T VL+
Sbjct: 204 SAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK-VNKVACGGEHTVVLTE 262
Query: 167 EGRVYTFSWGNDARLGHHT 185
G VYTF G +LGH T
Sbjct: 263 TG-VYTFGLGQYGQLGHGT 280
Score = 105 (42.0 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVS--EDGDVYSFG 336
V T+G G+YG LGHG + SVPK V+ L K +V G+ T V++ E+G +++FG
Sbjct: 265 VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTENGLMFTFG 324
Query: 337 CGESASLG 344
G LG
Sbjct: 325 DGRHGKLG 332
Score = 100 (40.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG++ WG G +G ++ C SVP V V +I + G Y + ++ DG++Y+F
Sbjct: 159 EDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSI--SCGYYHSAFITGDGELYTF 216
Query: 336 GCGESASLG 344
G E+ LG
Sbjct: 217 GEPENGKLG 225
Score = 91 (37.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG + T+G G LG E+ ++ VP+ V + + K VA G T V++E G VY+
Sbjct: 210 DGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTETG-VYT 267
Query: 335 FGCGESASLGHNAI 348
FG G+ LGH +
Sbjct: 268 FGLGQYGQLGHGTL 281
Score = 89 (36.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ G++Y FG + +G+ G + T V P V++LK A G T V +
Sbjct: 49 TAVVTGNGKLYMFGSNDWGQLGLGSKNT--VRKPTCVKALKPEKTKLAVCGRNHTLVYTE 106
Query: 167 EGRVYTFSWGNDARLG 182
+G VY ++ +LG
Sbjct: 107 KGNVYAAGGNSEGQLG 122
Score = 48 (22.0 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 276 QDGRVCTWGWGRYGCLGHGNE 296
++G + T+G GR+G LG G E
Sbjct: 316 ENGLMFTFGDGRHGKLGLGEE 336
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 181 (68.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 47/164 (28%), Positives = 86/164 (52%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA +G HS+ + + V S G NS GQLG + P PI++L
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+A+G S G+ G + ++ +P+ + +L +I ++Q + G++ + LS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 167 EGRVYTFSWGNDA--RLGHHTE-PNDVEPHPLLGTLENIPVVQI 207
+ +V FSWG ++ +LG E P+ P + +LE IP+ Q+
Sbjct: 146 DSQV--FSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPLAQV 186
Score = 173 (66.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLXXXXXXXXXXXXX 105
Q G HS+A++ V+S+G NS GQLG G + P+ +RSL
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVL 164
+ +S G + +G +S G+ + + ++ P V +LKN+ VV + G+ TAVL
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVL 251
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
+++G+V+TF +LG+ P P L+ ++ + V QI
Sbjct: 252 TQDGKVFTFGDNRSGQLGYSPTPEKRGPQ-LVERIDGL-VSQI 292
Score = 173 (66.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 73/288 (25%), Positives = 124/288 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLXXXXXXXXXXXXXXTML 109
G HS+AV KG V+++G+ S GQLG G +E + P+ I +L ++
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLA 142
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S QV+++GK+S G+ G + SPQ V SL+ I + Q A G + LS G
Sbjct: 143 LSKDSQVFSWGKNSHGQLGLGKEFPSQA-SPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPH-PL-LGTLENIPVVQIXXXXXXXXXXXXQPSGMA 225
+F WG+++ +L V+ + PL +G L+N+ VV I
Sbjct: 202 --SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK--- 256
Query: 226 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 285
V++ +++ P+L+E+ L Q G+V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHT--TGQVVSFGH 314
Query: 286 GRYGCLGHGNEEC--ES--VPKVVQALN--DVKAIHVATGDYTTFVVS 327
G + E E+ + ++ A + DV+ H+ G Y FV +
Sbjct: 315 GPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTT 362
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 42/146 (28%), Positives = 67/146 (45%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLXXXXXXXXXX 102
+Q AG HS A++ G + +GSNS+GQL G + +P + +L
Sbjct: 184 AQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
T +++ G+V+ FG + G+ Y K PQLVE + + V Q G++ T
Sbjct: 244 GDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK--RGPQLVERIDGL-VSQIDCGSYHTL 300
Query: 162 AVLSREGRVYTFSWG-NDARLGHHTE 186
A + G+V +F G +D H E
Sbjct: 301 AYVHTTGQVVSFGHGPSDTSKPTHPE 326
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 278 GRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GRV WG G G LG G +E PK + LND+K I V+ G Y + +S+D V+S+G
Sbjct: 94 GRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 337 CGESASLG 344
LG
Sbjct: 154 KNSHGQLG 161
Score = 89 (36.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 282 TWGWGRYGC----LGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
++GWG L N +S P V AL ++ ++++ GD T V+++DG V++FG
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Query: 337 CGESASLGHN 346
S LG++
Sbjct: 262 DNRSGQLGYS 271
Score = 82 (33.9 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 334
QDG+V T+G R G LG+ + P++V+ ++ + + + G Y T V G V S
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVS 311
Query: 335 FGCGES 340
FG G S
Sbjct: 312 FGHGPS 317
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 155 (59.6 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 37/141 (26%), Positives = 68/141 (48%)
Query: 45 NSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXX 103
++Q+I+ G +++ VT +G +YS+G S G+LGHG P+ I
Sbjct: 300 DAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCG 359
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
T ++ +G +YA+G G+ G +++ ++ I+V + G + TA
Sbjct: 360 EFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTA 419
Query: 163 VLSREGRVYTFSWGNDARLGH 183
++ EG+++TF G LGH
Sbjct: 420 FVTSEGKLFTFGDGTFGALGH 440
Score = 145 (56.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 41 CRRENSQAIAGPGHSIAV-------TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLX 93
CR +A G HS AV TS G ++++G G+LGHG E P + L
Sbjct: 458 CR--TIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELD 515
Query: 94 XXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVV 152
T+ +S +GQVYA G + + + V +P +E L FV
Sbjct: 516 TTSFQQVACGQSITVALSMSGQVYAMGT---ADPSHDI-----VRAPSCIEGGLGKSFVQ 567
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
+ A G AVL+ + VYT+ G++ +LGH
Sbjct: 568 EVACGFHHIAVLNSKAEVYTWGKGSNGQLGH 598
Score = 117 (46.2 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDY-TTFVVS------ED 329
+G++ T+G G +G LGHG+ ++P+ V+ALN + I A G + + VVS
Sbjct: 424 EGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSS 483
Query: 330 GDVYSFGCGESASLGHNAI 348
G ++++G G+ LGH I
Sbjct: 484 GKLFTWGDGDDGRLGHGDI 502
Score = 117 (46.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 36/133 (27%), Positives = 58/133 (43%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+AI+ GP H+ VTS+G +++FG + G LGHG PR + +L
Sbjct: 409 KAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVW 468
Query: 106 XTMLI-------SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ + + +G+++ +G G +G +L+ P V L Q A G
Sbjct: 469 HSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQ 526
Query: 159 FFTAVLSREGRVY 171
T LS G+VY
Sbjct: 527 SITVALSMSGQVY 539
Score = 115 (45.5 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G++ TWG G G LGHG+ EC +P V L+ VA G T +S G VY+ G
Sbjct: 484 GKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGT 543
Query: 338 GE 339
+
Sbjct: 544 AD 545
Score = 113 (44.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 36/142 (25%), Positives = 63/142 (44%)
Query: 68 GSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA 127
G + SG T+ + P+ ++S +L++ GQ+Y++G++S G
Sbjct: 273 GMHKSGSSSSLMTDS-FLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRL 331
Query: 128 EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDARLGHHT 185
+GV V P+L++ V A G F T ++ G +Y + G N LG +
Sbjct: 332 GHGV--CSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGS 389
Query: 186 EPNDVEPHPLLGTLENIPVVQI 207
+ +P +LG +E I V I
Sbjct: 390 GASHWKPVRILGQMEGIYVKAI 411
Score = 82 (33.9 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E +P +V+AL + V G +YT +
Sbjct: 585 VYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 55 (24.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 316 VATGDYTTFVVSEDGDVYSFGCGESASLGH 345
VA G + V++ +VY++G G + LGH
Sbjct: 569 VACGFHHIAVLNSKAEVYTWGKGSNGQLGH 598
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 218 (81.8 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 75/313 (23%), Positives = 127/313 (40%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
+A +G HS+ + S VYS G NS GQLG + + RP PI++L
Sbjct: 32 KAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEH 91
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
++ + G+V+ +G S G+ G + ++ P + SL I ++Q + G++ + LS
Sbjct: 92 SVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 150
Query: 167 EGRVYTFSWGNDARLGHHTEPNDV--EPHPL-LGTLENIPVVQIXXXXXXXXXXXXQPSG 223
+G+V FSWG++ R G N++ + P + +LE IP+ Q+ +
Sbjct: 151 DGQV--FSWGSN-RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTS 207
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
+ ++ P I + LN+ +DG+V T+
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV--VYISCGYEHTSVLTEDGQVFTF 265
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESAS 342
G L H P++++ + + G Y T V G V S G G S +
Sbjct: 266 GGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRGPSCT 324
Query: 343 LGHNAIADGQVCS 355
NA CS
Sbjct: 325 --SNATHQEAACS 335
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 37/135 (27%), Positives = 65/135 (48%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEEWRPRPIRSLXXXXXXXXXX 102
+Q AG HS A++ G + +G+N SGQL G+ E+ ++P I +L
Sbjct: 189 AQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISC 248
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
T ++++ GQV+ FG S + ++ + + PQL+E + V Q G++ T
Sbjct: 249 GYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGR--GGPQLIEGIGG-HVSQIECGSYHTI 305
Query: 162 AVLSREGRVYTFSWG 176
A + G+V + G
Sbjct: 306 AYVYTTGQVVSLGRG 320
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 208 (78.3 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 78/341 (22%), Positives = 139/341 (40%)
Query: 13 EAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGP-GHSIAVTS-KGVVYSFGSN 70
+A LK G W + F L E + + G G+ + T+ ++ G+N
Sbjct: 17 QATLSSLKMLDVGKWPI---FSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTN 73
Query: 71 SSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA-GQVYAFGKDSFGEAEY 129
SG LG G + PR + SL ++++ G+V+ +G +++ +
Sbjct: 74 CSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGN 133
Query: 130 GVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G + N
Sbjct: 134 GTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ 192
Query: 190 VEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPR 249
P + G L+N V+ I +G VY S ++ P
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVD--TG-EVYVWGYNGNGQLGLGSSGNQPTPC 249
Query: 250 LIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALN 309
+ Q + +Q +G++ WG YG LG GN+ +S P V
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVLT--DEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Query: 310 DVKAIHVAT--GDYTTFVVSEDGDVYSFG-C-GESASLGHN 346
D + I +A +T+ ++ G VY +G C G+S L H+
Sbjct: 308 D-RIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHH 347
Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
C + + IA G S+AV G VY +G N +GQLG G++ + P + +L
Sbjct: 201 CLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
T++++D GQ+YA+G +S+G+ G + + +P +VE I + A
Sbjct: 261 RVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK-DRIIEIAACHSA 319
Query: 159 FFTAVLSREGRVYTFSW--GNDARLGHHT 185
+A ++ G VY + G L HHT
Sbjct: 320 HTSAAKTQGGHVYMWGQCRGQSVILPHHT 348
Score = 142 (55.0 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 54/256 (21%), Positives = 108/256 (42%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXXXTM 108
+GP H + T+ G V+++G N+ QLG+GTT P I + L ++
Sbjct: 107 SGP-HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL 165
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
+++ G+V+A+G ++ G+ G + + P+ V L+N V+ A G + +
Sbjct: 166 VLTSDGEVFAWGYNNSGQVGSGSTANQPI--PRRVTGCLQNKVVMNIACGQMCSMAVVDT 223
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPL-LGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 226
G VY + + + +LG + N +P P + L+ I V ++ + G +
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDE--GQ-I 278
Query: 227 YSVXXXXXXXXXXXSRTDEKHPR--LIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWG 284
Y+ +++++ +P ++E+ +++ + Q G V WG
Sbjct: 279 YAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKT---QGGHVYMWG 335
Query: 285 W--GRYGCLGHGNEEC 298
G+ L H C
Sbjct: 336 QCRGQSVILPHHTHFC 351
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V TWG Y LG+G VP + L++ + I VA G Y + V++ DG+V+++
Sbjct: 117 DGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 336 GCGESASLGHNAIAD 350
G S +G + A+
Sbjct: 177 GYNNSGQVGSGSTAN 191
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 171 (65.3 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 51/169 (30%), Positives = 84/169 (49%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEEEWRPRPIRSLXXXXXXXXXX 102
E QA +G HS+ + S G V+S G N GQLG G IR+L
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVSC 83
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
++ + G+V+A+G S G+ G + T L+ P +++L +I + Q + G++ +
Sbjct: 84 GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI--PMKIKTLNDIKIKQVSCGHYHS 141
Query: 162 AVLSREGRVYTFSWGN--DARLGHHTE-PNDVEPHPLLGTLENIPVVQI 207
LS G+V FSWG+ D +LG + P+ P + +L+ IP+ Q+
Sbjct: 142 LALSEGGQV--FSWGSNSDGQLGLGKKFPSQASPQRVR-SLDGIPLAQV 187
Score = 169 (64.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLXXXXXXXXXXXXXXTML 109
G HS+AV KG V+++G+ S GQLG G +E P I++L ++
Sbjct: 84 GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLA 143
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+S+ GQV+++G +S G+ G + SPQ V SL I + Q A G + LS G
Sbjct: 144 LSEGGQVFSWGSNSDGQLGLGKKFPSQA-SPQRVRSLDGIPLAQVAAGGAHSFALSLSGT 202
Query: 170 VYTFSWG-NDA-RLGHH---TEPNDVEPHPLLGTLENIPVVQI 207
+F WG N+A +L H +P+ + L+N+ V+ I
Sbjct: 203 --SFGWGRNNAGQLALHKNNVSGQSYKPYSI-SALKNLGVIYI 242
Score = 167 (63.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 43/141 (30%), Positives = 71/141 (50%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLXXXXXXXXXXXXX 105
Q G HS+A++ G V+S+GSNS GQLG G + P+ +RSL
Sbjct: 133 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGA 192
Query: 106 XTMLISDAGQVYAFGKDSFGEA---EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
+ +S +G + +G+++ G+ + V G P + +LKN+ V+ + G T
Sbjct: 193 HSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSY--KPYSISALKNLGVIYISCGYEHTV 250
Query: 163 VLSREGRVYTFSWGNDARLGH 183
VL++ G+V+TF +LGH
Sbjct: 251 VLTQNGKVFTFGDNTYGQLGH 271
Score = 137 (53.3 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 36/132 (27%), Positives = 67/132 (50%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG-H--GTTEEEWRPRPIRSLXXXXXXXXXX 102
+Q AG HS A++ G + +G N++GQL H + + ++P I +L
Sbjct: 185 AQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISC 244
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT- 161
T++++ G+V+ FG +++G+ + K + PQLVE + + V Q G++ T
Sbjct: 245 GYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEK--SGPQLVEGIDGL-VSQIDCGSYHTL 301
Query: 162 AVLSREGRVYTF 173
A + G+V +F
Sbjct: 302 AYVYTTGKVVSF 313
Score = 129 (50.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 278 GRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GRV WG G G LG G +E +P ++ LND+K V+ G Y + +SE G V+S+G
Sbjct: 95 GRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWG 154
Query: 337 CGESASLG 344
LG
Sbjct: 155 SNSDGQLG 162
Score = 88 (36.0 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 282 TWGWGRYGC----LGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
++GWGR L N +S P + AL ++ I+++ G T V++++G V++FG
Sbjct: 203 SFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFG 262
Query: 337 CGESASLGHNAIAD 350
LGH+ A+
Sbjct: 263 DNTYGQLGHSPTAE 276
Score = 84 (34.6 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYS 334
Q+G+V T+G YG LGH +S P++V+ ++ + + + G Y T V G V S
Sbjct: 254 QNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVS-QIDCGSYHTLAYVYTTGKVVS 312
Query: 335 FG 336
FG
Sbjct: 313 FG 314
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 210 (79.0 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 75/315 (23%), Positives = 130/315 (41%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PIRSLXXXXXXXXXXXXX 105
+A +G HS+ + S VYS G NS GQLG + + RP PI++L
Sbjct: 32 KAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKE 91
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++ + G+V+ +G S G+ G + ++ P + SL I ++Q + G++ + LS
Sbjct: 92 HSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALS 150
Query: 166 REGRVYTFSWGNDARLGHHTEPNDV--EPHPL-LGTLENIPVVQIXXXXXXXXXXXXQPS 222
+G+V FSWG++ R G N++ + P + +LE IP+ Q+ +
Sbjct: 151 EDGQV--FSWGSN-RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGT 207
Query: 223 GMAVYSVXXXXXXXXXXXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVC 281
+ ++ ++ + P I + LN+ +DG+V
Sbjct: 208 SFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNV--VYISCGYEHTSVLTEDGQVF 265
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGES 340
T+G L H P++++ + + G Y T V G V S G G S
Sbjct: 266 TFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRGPS 324
Query: 341 ASLGHNAIADGQVCS 355
+ NA CS
Sbjct: 325 CT--SNATHQEAACS 337
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL---GHGTTEEE-WRPRPIRSLXXXXXXXXX 101
+Q AG HS A++ G + +G+N SGQL G+ E+ ++P I +L
Sbjct: 190 AQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYIS 249
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
T ++++ GQV+ FG S + ++ + + PQL+E + V Q G++ T
Sbjct: 250 CGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGR--GGPQLIEGIGG-HVSQIECGSYHT 306
Query: 162 -AVLSREGRVYTFSWG 176
A + G+V + G
Sbjct: 307 IAYVYTTGQVVSLGRG 322
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 203 (76.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 76/292 (26%), Positives = 124/292 (42%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIR-SLXXXXXXXXXXXXXXT 107
G H+ AVT G +Y++G +++ G LGHG+ W P+ I SL T
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ G+++ FG +FG +G + T V P+ VESL + + + G + TA +
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKET--VQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459
Query: 167 -----------EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXX 214
G+++T+ G+ RLGH + ++P + ++ N +
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519
Query: 215 XXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXX 274
Q V+++ +TD K P L+E +L +
Sbjct: 520 LTTSGQ-----VFTMGSTVYGQLGNL-QTDGKLPCLVED-KLASEFVEEISCGAYHVAAL 572
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFV 325
V TWG G G LGHG+ E VP +V+AL D ++A G +YT +
Sbjct: 573 TSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 155 (59.6 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 38/140 (27%), Positives = 68/140 (48%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXX-XXX 105
Q G H+ VT +G ++++G S G+LGHG ++ + PR + SL
Sbjct: 285 QIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEF 344
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV--TSPQLVESLKNIFVVQAAIGNFFTAV 163
T ++ AG++Y +G + G G+ + ++ SL+ + V + G + TA+
Sbjct: 345 HTCAVTLAGELYTWGDGTHNVGLLG-HGSDISHWIPKRIAGSLEGLHVASVSCGPWHTAL 403
Query: 164 LSREGRVYTFSWGNDARLGH 183
++ GR++TF G LGH
Sbjct: 404 ITSYGRLFTFGDGTFGVLGH 423
Score = 118 (46.6 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 35/125 (28%), Positives = 59/125 (47%)
Query: 86 PRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
P+P+ S ++ G+++ +G++S G +G+ G K V P+LVES
Sbjct: 272 PKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI-G-KDVFHPRLVES 329
Query: 146 LKNIFVVQ-AAIGNFFTAVLSREGRVYTFSWG--NDARLGHHTEPNDVEPHPLLGTLENI 202
L V A G F T ++ G +YT+ G N LGH ++ + P + G+LE +
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGL 389
Query: 203 PVVQI 207
V +
Sbjct: 390 HVASV 394
Score = 106 (42.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/105 (27%), Positives = 47/105 (44%)
Query: 244 DEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRY--GCLGHGNEECESV 301
D HPRL+E + G + TWG G + G LGHG++ +
Sbjct: 320 DVFHPRLVESLTATSSVDFVACGEFHTCAVT-LAGELYTWGDGTHNVGLLGHGSDISHWI 378
Query: 302 PK-VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
PK + +L + V+ G + T +++ G +++FG G LGH
Sbjct: 379 PKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGH 423
Score = 104 (41.7 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE--------- 328
GR+ T+G G +G LGHG++E P+ V++L+ ++ I V+ G + T V E
Sbjct: 408 GRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSS 467
Query: 329 ---DGDVYSFGCGESASLGH 345
G ++++G G+ LGH
Sbjct: 468 SVSSGKLFTWGDGDKNRLGH 487
Score = 98 (39.6 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G++ TWG G LGHG+++ P V AL D +A G T ++ G V++ G
Sbjct: 472 GKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGS 531
Query: 338 GESASLGHNAIADGQVCSLL 357
LG N DG++ L+
Sbjct: 532 TVYGQLG-NLQTDGKLPCLV 550
Score = 74 (31.1 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V T G YG LG+ + + +P +V+ L ++ G Y ++ +VY++G
Sbjct: 524 GQVFTMGSTVYGQLGNLQTDGK-LPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWG 582
Query: 337 CGESASLGHNAIADGQVCSLL 357
G + LGH + D +V +++
Sbjct: 583 KGANGRLGHGDLEDRKVPTIV 603
Score = 67 (28.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 111 SDA-GQVYAFGK---DSFGEAEYGVQGTKLVTS-----PQLVESLKNIFVVQAAIGNFFT 161
SDA G VY +G+ D+ + + L T P+ +ES + V Q A G
Sbjct: 234 SDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHA 293
Query: 162 AVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLL 196
A ++R+G ++T WG ++ RLGH DV HP L
Sbjct: 294 AFVTRQGEIFT--WGEESGGRLGHGIG-KDVF-HPRL 326
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 61/250 (24%), Positives = 102/250 (40%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML- 109
G H++ TS+G +Y+ G N+ GQLG G + + T
Sbjct: 96 GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAA 155
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G++Y +G +S G+ G + L +PQ V K +F V G + +A ++ +G
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESNAL--TPQEVSVGKRVFWVSC--GYYHSAFVTVDGA 211
Query: 170 VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP--VVQIXXXXXXXXXXXXQPSGMAVY 227
+YTF + +LG TE + H + + +IP VVQ+ VY
Sbjct: 212 LYTFGEKDSGKLGLSTEK--LANHKVPQQVTDIPDRVVQVACGGGHTVALTENE----VY 265
Query: 228 SVXXXXXXXXXXXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 286
S + E PR++E F+ ++ +G + T+G G
Sbjct: 266 SFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALIT--DNGLLYTFGDG 323
Query: 287 RYGCLGHGNE 296
R+G LG G E
Sbjct: 324 RHGKLGLGEE 333
Score = 149 (57.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H+ VT G ++ FGSN+ GQLG GT +P +++L T++
Sbjct: 44 GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVF 103
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGR 169
+ G +YA G ++ G+ G + TS LVE K + A G+ +A L+++GR
Sbjct: 104 TSRGNLYACGGNNEGQLGLGDCNDR--TSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGR 161
Query: 170 VYTFSWGNDARLGHHTEPNDVEP 192
+Y + ++ ++G E N + P
Sbjct: 162 LYMWGDNSEGQIGLGKESNALTP 184
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 44/138 (31%), Positives = 61/138 (44%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG S A+T G +Y +G NS GQ+G G P+ + S+ +
Sbjct: 148 AGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEV-SVGKRVFWVSCGYYHSAFV 206
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
D G +Y FG+ G+ G+ KL PQ V + + VVQ A G T L+ E
Sbjct: 207 TVD-GALYTFGEKDSGKL--GLSTEKLANHKVPQQVTDIPDR-VVQVACGGGHTVALT-E 261
Query: 168 GRVYTFSWGNDARLGHHT 185
VY+F G +LGH T
Sbjct: 262 NEVYSFGLGQFGQLGHGT 279
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 38/121 (31%), Positives = 50/121 (41%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXX 105
Q G GH++A+T + VYSFG GQLGHGT E R PR +
Sbjct: 248 QVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGEN 306
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T LI+D G +Y FG G+ G + P L + V G VL+
Sbjct: 307 HTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366
Query: 166 R 166
+
Sbjct: 367 K 367
Score = 113 (44.8 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ V ++G G++G LGHG ES +P+VV+ + H A G+ T +++++G +Y+F
Sbjct: 261 ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTF 320
Query: 336 GCGESASLG 344
G G LG
Sbjct: 321 GDGRHGKLG 329
Score = 94 (38.1 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVYS 334
DG + T+G G LG E+ + KV Q + D+ + + VA G T ++E+ +VYS
Sbjct: 209 DGALYTFGEKDSGKLGLSTEKLAN-HKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYS 266
Query: 335 FGCGESASLGH 345
FG G+ LGH
Sbjct: 267 FGLGQFGQLGH 277
Score = 61 (26.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
I ++G V+ FGK F + +P LKN ++ + G+ TA+++ G+
Sbjct: 9 IPESGAVFTFGKSKFAD-----------NAPSKFW-LKNDVPLRISCGDEHTALVTENGK 56
Query: 170 VYTFSWGNDARLGHHTEPNDVEP 192
++ F N +LG T+ +P
Sbjct: 57 LFMFGSNNWGQLGLGTKTTVNKP 79
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 142 (55.0 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH----GTTEEEWRPRPIRSLXXXXXXXXX 101
S AG HS+AVTS G ++++G N GQLG + + P+ + L
Sbjct: 85 SSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAF 144
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
+ I D G ++ +G+ G+ G G P VE+L VV+ ++G
Sbjct: 145 ASGVVSAAIGDDGSLWVWGRSKRGQLGLG-NGIIEARVPSRVENLAAEHVVKVSLGWGHA 203
Query: 162 AVLSREGRVYTFSWGNDARLGH 183
L+ +G+V+ + + D R+G+
Sbjct: 204 LALTVDGKVFGWGYVADGRVGN 225
Score = 107 (42.7 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
+ +WGW R LG G E ++P+ V+ + V+ G + V+E G+ + +GCG+
Sbjct: 357 ILSWGWNRSRQLGRGKPE--NLPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGK 414
Query: 340 SASLGHNAIAD 350
+ LG + +D
Sbjct: 415 NGRLGLGSSSD 425
Score = 68 (29.0 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 21/84 (25%), Positives = 33/84 (39%)
Query: 245 EKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKV 304
E PR +E F P + G WG G+ G LG G+ E P +
Sbjct: 374 ENLPREVEGFD--GESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPML 431
Query: 305 VQALNDVKAIHVATGDYTTFVVSE 328
++ + VA D++ +V+E
Sbjct: 432 LEDVEGCVLQAVAGFDHSLILVAE 455
Score = 43 (20.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHN 346
P +V+ + K +A G + ++ DG + S G LG +
Sbjct: 277 PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRS 321
Score = 43 (20.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD--VYS 334
DG + + G YG LG ++ P + I +A G + + G+ + S
Sbjct: 304 DGTLLSAGSNIYGQLGRSKQDLGMKPVDITE----SPISIAAGLGHSLAICNRGERNILS 359
Query: 335 FGCGESASLG 344
+G S LG
Sbjct: 360 WGWNRSRQLG 369
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 122 (48.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 42/124 (33%), Positives = 54/124 (43%)
Query: 62 GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA-GQVYAFG 120
G VY+ G N+ GQLG G T+E I T A G++Y FG
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 121 KDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
+ G+ G+ LV PQLV + V+Q A G T VL+ E VYTF G
Sbjct: 63 EPESGKL--GLPPKLLVNHKVPQLVPGISEK-VIQVACGGGHTVVLT-EKAVYTFGLGQF 118
Query: 179 ARLG 182
+LG
Sbjct: 119 GQLG 122
Score = 82 (33.9 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVS 327
V T+G G++G LG G E S PKV++++ D K HV G+ T +++
Sbjct: 110 VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALIT 158
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 159 (61.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 46/156 (29%), Positives = 75/156 (48%)
Query: 51 GPGHSIAVTSKGVVYSFG--SNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXXXT 107
G H+ AVT G +Y++G ++++G LGHGT W P+ I L T
Sbjct: 332 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 391
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR- 166
LI+ GQ++ FG +FG +G + T V P+ VESL + + A G + A +
Sbjct: 392 ALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVWHAAAIVEV 449
Query: 167 ----------EGRVYTFSWGNDARLGHHTEPNDVEP 192
G+++T+ G+ +RLGH + ++P
Sbjct: 450 IVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKP 485
Score = 149 (57.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 64 VYSFGSNSSGQLGH-GTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKD 122
V FG++ + +G+ G+ + P+P+ S L+S G+V+ +G+
Sbjct: 242 VTKFGADKN--IGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEA 299
Query: 123 SFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG--NDAR 180
S G +G+ G K VT PQL+ESL + A G F T ++ G +YT+ G N
Sbjct: 300 SGGRLGHGM-G-KDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGL 357
Query: 181 LGHHTEPNDVEPHPLLGTLENIPVVQI 207
LGH T+ + P + G LE + + +
Sbjct: 358 LGHGTDVSHWIPKRISGPLEGLQIASV 384
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 62/247 (25%), Positives = 101/247 (40%)
Query: 114 GQVYAFGKDSFG-EAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G+V FG + G G++ V P+ +ES + V A G A++SR+G V+
Sbjct: 235 GEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVF 294
Query: 172 TFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXX 231
T+ + RLGH DV P L +E++ I +Y+
Sbjct: 295 TWGEASGGRLGHGMG-KDVTG-PQL--IESLAATSIDFVACGEFHTCAVTMTGEIYTWGD 350
Query: 232 XXXXXXXXXSRTDEKH--PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYG 289
TD H P+ I L LQ G++ T+G G +G
Sbjct: 351 GTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFG 409
Query: 290 CLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-----------DGDVYSFGCG 338
LGHG++E P+ V++L+ ++ I VA G + + E G ++++G G
Sbjct: 410 VLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDG 469
Query: 339 ESASLGH 345
+ + LGH
Sbjct: 470 DKSRLGH 476
Score = 141 (54.7 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 38/131 (29%), Positives = 60/131 (45%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS + S G ++++G +LGHG E +P + +L T+ ++ +
Sbjct: 453 HSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTS 512
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGRVYT 172
G+VY G +G+ KL P LVE L V + A G + AVL+ V+T
Sbjct: 513 GKVYTMGSTVYGQLGNPNADGKL---PCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFT 569
Query: 173 FSWGNDARLGH 183
+ G + RLGH
Sbjct: 570 WGKGANGRLGH 580
Score = 140 (54.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 35/135 (25%), Positives = 65/135 (48%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H+ V+ +G V+++G S G+LGHG ++ P+ I SL T +
Sbjct: 280 GVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAV 339
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVES-LKNIFVVQAAIGNFFTAVLSREG 168
+ G++Y +G + G GT + P+ + L+ + + + G + TA+++ G
Sbjct: 340 TMTGEIYTWGDGTHNAGLLG-HGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTG 398
Query: 169 RVYTFSWGNDARLGH 183
+++TF G LGH
Sbjct: 399 QLFTFGDGTFGVLGH 413
Score = 113 (44.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 35/144 (24%), Positives = 63/144 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX-----XXXX 105
GP H+ +TS G +++FG + G LGHG E + PR + SL
Sbjct: 387 GPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAI 446
Query: 106 XTMLIS------DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
++++ +G+++ +G +G + +L P V +L + + A G+
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRL--KPTCVSALIDHTFHRVACGHS 504
Query: 160 FTAVLSREGRVYTFSWGNDARLGH 183
T L+ G+VYT +LG+
Sbjct: 505 LTVGLTTSGKVYTMGSTVYGQLGN 528
Score = 108 (43.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 30/80 (37%), Positives = 40/80 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G++ TWG G LGHG++E P V AL D VA G T ++ G VY+ G
Sbjct: 461 GKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS 520
Query: 338 GESASLGHNAIADGQVCSLL 357
LG N ADG++ L+
Sbjct: 521 TVYGQLG-NPNADGKLPCLV 539
Score = 85 (35.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V T G YG LG+ N + + +P +V+ L +A G Y V++ +V+++G
Sbjct: 513 GKVYTMGSTVYGQLGNPNADGK-LPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWG 571
Query: 337 CGESASLGHNAIADGQVCSLL 357
G + LGH + D + +L+
Sbjct: 572 KGANGRLGHGDVEDRKAPTLV 592
Score = 81 (33.6 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
V TWG G G LGHG+ E P +V AL + ++A G T +
Sbjct: 567 VFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAI 613
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 155 (59.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 46/163 (28%), Positives = 73/163 (44%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
S G H IA+TS G V+++G SSGQLGHG P+ +
Sbjct: 51 SMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWS 110
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +SD+G ++ G SFG+ +G T +++P V N V A G + VL
Sbjct: 111 HSGFVSDSGCIFTCGNGSFGQLGHG--DTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLF 168
Query: 166 REGRVYTFSWGNDARLGHHTEP-NDVEPHPLLGTLENIPVVQI 207
+V F G +LG ++ V ++ L+++ VV+I
Sbjct: 169 AGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRI 211
Score = 151 (58.2 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 42/150 (28%), Positives = 64/150 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+QA AG HS V+ G +++ G+ S GQLGHG T P +
Sbjct: 103 TQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMR 162
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++++ QV FG G+ + K V P +V LK++ VV+ + +A +S
Sbjct: 163 HSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAIS 222
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
+G+ FSWG G P PL
Sbjct: 223 ADGQF--FSWGRGFCGGPDVHAPQSLPSPL 250
Score = 118 (46.6 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 30/120 (25%), Positives = 57/120 (47%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDS 123
V+S+G+ + GQLG ++E P+ + + ++ G+V+ +G+ S
Sbjct: 17 VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGS 76
Query: 124 FGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
G+ +G +T P+LV + + QAA G + +S G ++T G+ +LGH
Sbjct: 77 SGQLGHG--DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134
Score = 102 (41.0 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 279 RVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHV-ATGDYTTFVVSEDGDVYSF 335
+VC +G G+ G LG ++ +SV P VV L DV+ + + A GD++ +S DG +S+
Sbjct: 172 QVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSA-AISADGQFFSW 230
Query: 336 GCG 338
G G
Sbjct: 231 GRG 233
Score = 88 (36.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV----KAIHVATGDYTTFVV 326
++G V TWGWG +G LG GN ++ P++V +L + K I V G T+ V
Sbjct: 322 ENGEVKTWGWGEHGQLGLGNTNDQTSPELV-SLGSIDLRTKEIKVYCGSGFTYAV 375
Score = 67 (28.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 296 EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ E++ + V + VK + +A G + V+E+G+V ++G GE LG
Sbjct: 290 DSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLG 338
Score = 44 (20.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG+ + WGR C G +S+P + + VA G +++ DG+V+ G
Sbjct: 224 DGQF--FSWGRGFCGGPDVHAPQSLP------SPLSFREVAVGWNHALLLTVDGEVFKLG 275
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 183 (69.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 52/167 (31%), Positives = 83/167 (49%)
Query: 45 NSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXX 100
N Q I G HS+ +TS G V+++G N+SGQ+G G+T + PR + L
Sbjct: 151 NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
Query: 101 XXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
M + D G+VY +G + G+ G G + +P V +L+ I V + A G
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ--PTPCRVAALQGIRVQRVACGYAH 268
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
T VL+ EG+VY + + +LG + N P P+ T+E +++I
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--TVEKDRIIEI 313
Score = 151 (58.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 49/202 (24%), Positives = 88/202 (43%)
Query: 9 KPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGP-GHSIAVTS-KGVVYS 66
KP+ +A LK G W + F L E + + G G+ + T+ ++
Sbjct: 14 KPV-QATLSSLKMLDVGKWPI---FSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFV 69
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX-XTMLISDAGQVYAFGKDSFG 125
G+N G LG G + PR + SL +L + G+V+ +G +++
Sbjct: 70 LGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHT 185
+ G LV + +L N V++ A G++ + VL+ +G V+ + + N ++G +
Sbjct: 130 QLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS 188
Query: 186 EPNDVEPHPLLGTLENIPVVQI 207
N P + G L+N VV I
Sbjct: 189 TVNQPIPRRVTGCLQNKVVVTI 210
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 56 IAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQ 115
+AV G VY +G N +GQLG G + + P + +L T++++D GQ
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 175
VYA+G +S+G+ G + + +P VE I + A +A ++ G VY W
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEK-DRIIEIAACHSTHTSAAKTQGGHVYM--W 334
Query: 176 G 176
G
Sbjct: 335 G 335
Score = 133 (51.9 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 57/234 (24%), Positives = 94/234 (40%)
Query: 115 QVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-EGRVYT 172
+++ G + G G VQ T P+ ++SL + + G+ VL+ EG V+T
Sbjct: 66 EIFVLGTNCCGCLGLGDVQST---IEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFT 122
Query: 173 FSWGNDA--RLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVX 230
WG++A +LG+ T + + P + L N V+++ S V++
Sbjct: 123 --WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT---SDGEVFAWG 177
Query: 231 XXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC 290
S ++ PR + L N G V WG+ G
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGC-LQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 291 LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
LG GN + P V AL ++ VA G T V++++G VY++G LG
Sbjct: 237 LGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290
Score = 97 (39.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT--GDYTTFVVSEDGDVYS 334
+G+V WG YG LG GN+ +S P V D + I +A +T+ ++ G VY
Sbjct: 275 EGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKD-RIIEIAACHSTHTSAAKTQGGHVYM 333
Query: 335 FG-C-GESASLGH 345
+G C G+S L H
Sbjct: 334 WGQCRGQSVILPH 346
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 203 (76.5 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 81/316 (25%), Positives = 124/316 (39%)
Query: 38 EACCRREN--SQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAP 400
Query: 91 SLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
S T +IS G V A GK S+G G + E ++I
Sbjct: 401 SFSDAQTIEAGQYC--TFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIGNF-FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXX 209
V ++ G+ T + EG V+++ G+ +LGH P + G L+ VV +
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 XXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXX 269
+Y+ P L++ N+
Sbjct: 519 GYRHSAAVTEDGE---LYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSS 571
Query: 270 XXXXXGQDGR-VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
+DGR V ++G G G LGHG+ PKV++AL + V G ++ ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 329 DGDVYSFGCGESASLG 344
G VY++GCG A LG
Sbjct: 632 TGQVYAWGCG--ACLG 645
Score = 199 (75.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 64/277 (23%), Positives = 119/277 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXX 104
S + GH++A T++G V+S+G G+LGHG + + P+ I+ L
Sbjct: 461 SSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGY 520
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +++ G++Y +G+ FG +G ++ + P LV+ + N V + + G+ T L
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHTIAL 576
Query: 165 SREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
S++GR V++F G++ +LGH + N V ++ L+ + + ++ +G
Sbjct: 577 SKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TG 633
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
VY+ T + P+LIE+ + D V W
Sbjct: 634 Q-VYAWGCGACLGCGSSEATALR-PKLIEELAATRI--VDISIGDSHCLSLSHDNEVYAW 689
Query: 284 GWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
G G G GN + PK V L+ + ++ G
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Score = 196 (74.1 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 73/314 (23%), Positives = 133/314 (42%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLXXXXXX 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 157
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 464 KGSDGH--TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXX 217
+A ++ +G +YT+ G+ RLGH + N L+ + N+ V
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK 578
Query: 218 XXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD 277
G V+S P++IE Q + ++
Sbjct: 579 ----DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--T 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 61/239 (25%), Positives = 106/239 (44%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGH 345
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 135 (52.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 43/142 (30%), Positives = 59/142 (41%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-SLXXXXXXXXXXXXX 105
QA+AG H++ ++ G VY+FG N G LG T+EE P + L
Sbjct: 71 QAVAGGMHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEKIIQVSAGDSH 130
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
L D G VY +G G+ + K T P V K VV+ GN +L
Sbjct: 131 SAALTEDGG-VYVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDKP--VVKIVSGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ G +YT G +LG E
Sbjct: 188 TAHGELYTSGCGEQGQLGRVAE 209
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 40/166 (24%), Positives = 76/166 (45%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX--XXXXX 103
+ G + AV+ +G VY FG ++ QLG +T + P + S
Sbjct: 240 TDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGG 299
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
T+ ++ G+ Y+ G+ +G G G K + P +V + ++ VV A G +
Sbjct: 300 QHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEK--SEPTVVPGISDVQVV--ACGASVSY 355
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQI 207
++++G V+++ G + +LG E ++ P + G LEN V+ +
Sbjct: 356 AVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSV 401
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 66/299 (22%), Positives = 113/299 (37%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGS--NSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXX 104
Q AG HS A+T G VY +GS +++G +G ++ P++
Sbjct: 123 QVSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTV-PVKVPIDKPVVKIVSGN 181
Query: 105 XXTMLISDAGQVYAFGKDSFGE----AEY-----GVQGTKLVTSPQLV--ESLKNIFVVQ 153
++++ G++Y G G+ AE+ G +G + PQ+V + +
Sbjct: 182 DHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTD 241
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXX 213
G +FT +S+EG VY F N +LG + P L + +N +
Sbjct: 242 VFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKL-SSFKNSTTSWVGFSGGQ 300
Query: 214 XXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEK-HPRLIEQFQLLNLQPXXXXXXXXXXX 272
G A YS+ EK P ++ ++Q
Sbjct: 301 HHTLCLNSEGKA-YSLGRAEYGRLGLGKDVGEKSEPTVVPGIS--DVQVVACGASVSYAV 357
Query: 273 XXGQDGRVCTWGWGRYGCLGHGNEECESVPKVV--QALNDVKAIHVATGDYTTFVVSED 329
+ G V +WG G LG G EE E P + + L + + V++G T ++ +D
Sbjct: 358 T--KQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKD 414
Score = 103 (41.3 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 34/117 (29%), Positives = 48/117 (41%)
Query: 61 KGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFG 120
KG+V G GQLG G E R +P T+ +SD G VY FG
Sbjct: 34 KGLVLVLGQGDVGQLGLGEDVME-RKKPALVTLPEGIVQAVAGGMHTVCLSDTGNVYTFG 92
Query: 121 KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
+ G T P V+ + I +Q + G+ +A L+ +G VY WG+
Sbjct: 93 CNDEGALGRDTSEEGSETVPAKVDLGEKI--IQVSAGDSHSAALTEDGGVYV--WGS 145
Score = 101 (40.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+G+ + G YG LG G + E S P VV ++DV+ VA G ++ V++ G V+S+
Sbjct: 309 EGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQV--VACGASVSYAVTKQGSVFSW 366
Query: 336 GCGESASLG 344
G G + LG
Sbjct: 367 GMGTNLQLG 375
Score = 81 (33.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 26/83 (31%), Positives = 33/83 (39%)
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
+ G V G+ G+ G + P LV + I VQA G T LS G VY
Sbjct: 33 EKGLVLVLGQGDVGQLGLG-EDVMERKKPALVTLPEGI--VQAVAGGMHTVCLSDTGNVY 89
Query: 172 TFSWGNDARLGHHTEPNDVEPHP 194
TF ++ LG T E P
Sbjct: 90 TFGCNDEGALGRDTSEEGSETVP 112
Score = 79 (32.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 276 QDGRVCTWGWGR--YGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+DG V WG R G +G ++C +VP V+ D + + +G+ +++ G+
Sbjct: 136 EDGGVYVWGSFRDNNGVIGLLEPMKKC-TVP--VKVPIDKPVVKIVSGNDHLVMLTAHGE 192
Query: 332 VYSFGCGESASLGHNA 347
+Y+ GCGE LG A
Sbjct: 193 LYTSGCGEQGQLGRVA 208
Score = 70 (29.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 31/104 (29%), Positives = 42/104 (40%)
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
GQ GRV R G G E +++ V V G Y TF VS++G VY
Sbjct: 202 GQLGRVAEHFANRGGRKGL-MRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYG 260
Query: 335 FGCGESASLGHNAIADGQVCSL-LFLSIFQYLQI-WLNLSSYRH 376
FG LG + C + + LS F+ W+ S +H
Sbjct: 261 FGLSNYHQLGTQST---NTCFVPVKLSSFKNSTTSWVGFSGGQH 301
Score = 58 (25.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKA-IHVATGDYTTFVVSEDGDVY 333
++G V +G Y LG + VP K+ N + + + G + T ++ +G Y
Sbjct: 254 KEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAY 313
Query: 334 SFGCGESASLG 344
S G E LG
Sbjct: 314 SLGRAEYGRLG 324
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 81/321 (25%), Positives = 132/321 (41%)
Query: 58 VTSKGVVYSFGSN-SSGQLGHGTTEEEW------RPRPIRSLXXXXXXXXXXXXXXTMLI 110
+ S G VY +G + G L GT E PRP+ S L+
Sbjct: 207 IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 266
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 168
+ G+V+ +G++ G +G+Q ++ P+LVE +L NI V A G + T V+S G
Sbjct: 267 TRQGEVFTWGEEVGGRLGHGIQVD--ISRPKLVEFLALTNIDFV--ACGEYHTCVVSTSG 322
Query: 169 RVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGM 224
+ FSWG N LGH ++ + P + G LE + V+ + +G
Sbjct: 323 DL--FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATA--NGK 378
Query: 225 AVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXX--XXXXXXXXGQDG---- 278
+++ +R +P+ ++ L GQ
Sbjct: 379 -LFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMS 437
Query: 279 --RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
++ TWG G LGHGN+E +P V +L D +A G T ++ G V++ G
Sbjct: 438 SRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMG 497
Query: 337 CGESASLGHNAIADGQVCSLL 357
LG N+I+DG++ L+
Sbjct: 498 GTAHGQLG-NSISDGKLPCLV 517
Score = 134 (52.2 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 36/139 (25%), Positives = 65/139 (46%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q + G H VT +G V+++G G+LGHG + RP+ + L
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYH 314
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVES-LKNIFVVQAAIGNFFTAVL 164
T ++S +G ++++G G G+ + P+ V L+ + V+ A G + +A+
Sbjct: 315 TCVVSTSGDLFSWGDGIHNVGLLG-HGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALA 373
Query: 165 SREGRVYTFSWGNDARLGH 183
+ G+++TF G LGH
Sbjct: 374 TANGKLFTFGDGAFGVLGH 392
Score = 130 (50.8 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 38/146 (26%), Positives = 61/146 (41%)
Query: 39 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
AC + + G + S ++++G +LGHG E P + SL
Sbjct: 416 ACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH 475
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 157
T+ ++ +G V+ G + G+ + KL P LV+ L FV + A G
Sbjct: 476 KIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL---PCLVQDRLVGEFVEEIACG 532
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGH 183
AVL+ V+T+ G + RLGH
Sbjct: 533 AHHVAVLTSRSEVFTWGKGANGRLGH 558
Score = 112 (44.5 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 38/143 (26%), Positives = 60/143 (41%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G HS T+ G +++FG + G LGHG E P+ ++SL T I
Sbjct: 366 GTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425
Query: 111 SDA-GQ---------VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ GQ ++ +G +G + T L+ P V SL + + A G+ F
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL--PTCVSSLIDYNFHKIACGHTF 483
Query: 161 TAVLSREGRVYTFSWGNDARLGH 183
T L+ G V+T +LG+
Sbjct: 484 TVALTTSGHVFTMGGTAHGQLGN 506
Score = 82 (33.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFV 325
V TWG G G LGHG+ E + P +V+AL D VK++ + ++T+ +
Sbjct: 545 VFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGS-NFTSSI 591
Score = 67 (28.6 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V T G +G LG+ + + +P +VQ L +A G + V++ +V+++G
Sbjct: 491 GHVFTMGGTAHGQLGNSISDGK-LPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWG 549
Query: 337 CGESASLGHNAIADGQVCSLL 357
G + LGH D + +L+
Sbjct: 550 KGANGRLGHGDTEDKRTPTLV 570
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 154 (59.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 48/144 (33%), Positives = 64/144 (44%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G GHS VT +G ++ G N GQLG G TEE P +SL T+++
Sbjct: 57 GGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIIL 116
Query: 111 SDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQV + G +SFG+ GV G + PQ +E L+ VV A G + G
Sbjct: 117 TENGQVLSCGSNSFGQL--GVPHGPRRCVIPQAIELLREK-VVSIAAGLRHALAATASGT 173
Query: 170 VYTFSWGND-ARLGHHTEPNDVEP 192
V F WG A G P P
Sbjct: 174 V--FQWGTGLASSGRRLCPGQTLP 195
Score = 97 (39.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXX-XXXXXXXXXXTMLI 110
P S AV + ++++G+NS GQLG G E+ + + + ++
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVV 64
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D G ++ G + G+ G L +P +SL + Q A G FT +L+ G+V
Sbjct: 65 TDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQV 122
Query: 171 YTFSWGNDARLG 182
+ + +LG
Sbjct: 123 LSCGSNSFGQLG 134
Score = 86 (35.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 44 ENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXX 100
ENSQA+ AG HS ++T G +Y +GSN GQL P+ I +
Sbjct: 210 ENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIA 268
Query: 101 XXXXXXTMLISDA--GQVYAFGKDSFGE 126
T L++ G+V+ +G+ +G+
Sbjct: 269 AVWSGWTHLVAQTVTGKVFTWGRADYGQ 296
Score = 85 (35.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 276 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
++G+V + G +G LG HG C +P+ ++ L + K + +A G + G V+
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHGPRRCV-IPQAIELLRE-KVVSIAAGLRHALAATASGTVF 175
Query: 334 SFGCGESASLGHNAIADGQVCSLLFLS 360
+G G AS G + GQ L FL+
Sbjct: 176 QWGTG-LASSGRR-LCPGQTLPL-FLT 199
Score = 80 (33.2 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 278 GRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G VC +WGW +G G G E PK V L +HV G
Sbjct: 350 GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCG 392
Score = 79 (32.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 38/139 (27%), Positives = 55/139 (39%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLXXXXXXXXXXXX 104
Q G +I +T G V S GSNS GQLG HG P+ I L
Sbjct: 105 QVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVI-PQAIE-LLREKVVSIAAGL 162
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL---VTS--PQLVESLKNIFVVQAAIGNF 159
+ + +G V+ +G G L +T+ P V L+N V G+
Sbjct: 163 RHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSD 222
Query: 160 FTAVLSREGRVYTFSWGND 178
+A L+ G +Y WG++
Sbjct: 223 HSASLTDAGELYV--WGSN 239
Score = 48 (22.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE 299
G+V TWG YG LG E E
Sbjct: 284 GKVFTWGRADYGQLGRTVETRE 305
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 159 (61.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHG---------TTEEEWRPRPIRSLXXXX 96
Q++A G HS+AVT G V S+G SG+LGHG + E+ PR I+ L
Sbjct: 191 QSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIK 250
Query: 97 XXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+ + G + FG+ S + +G G + T+P ++ + + + A
Sbjct: 251 VTNVAAGLLHSACTDENGSAFMFGEKSINKMGFG--GVRNATTPSIISEVP--YAEEVAC 306
Query: 157 GNFFTAVLSREGRVYTFSWGND 178
G + T V++R G +YT WG++
Sbjct: 307 GGYHTCVVTRGGELYT--WGSN 326
Score = 139 (54.0 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 37/138 (26%), Positives = 63/138 (45%)
Query: 48 AIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLXXXXXXXXXXXXX 105
A+A G H++ +T V++ G N GQLG + P + L
Sbjct: 86 AVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYH 145
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ D G++Y +GK+S G+ G + ++V P VE+L I + A+G+ + ++
Sbjct: 146 SAAITVD-GELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVT 204
Query: 166 REGRVYTFSWGNDARLGH 183
G V ++ G RLGH
Sbjct: 205 DGGEVLSWGGGGSGRLGH 222
Score = 127 (49.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 41/152 (26%), Positives = 66/152 (43%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW-R-PRPIRSLXXXXXXXXXXXXXXT 107
AG HS A+T G +Y +G NSSGQLG G R P + +L +
Sbjct: 141 AGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHS 200
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTK--LVTS-----PQLVESLKNIFVVQAAIGNFF 160
+ ++D G+V ++G G +G Q + ++ S P+L++ L+ I V A G
Sbjct: 201 VAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLH 260
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
+A G + F + ++G N P
Sbjct: 261 SACTDENGSAFMFGEKSINKMGFGGVRNATTP 292
Score = 101 (40.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 67 FGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGE 126
+GS G+LG G + +W P +L T+ +++ +V+A G + G+
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQ 113
Query: 127 AEYGVQGTKL-VTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
GV K P V L K+I + A G + +A ++ +G +Y + + +LG
Sbjct: 114 L--GVSDVKSHAMDPLEVSGLDKDILHISA--GYYHSAAITVDGELYMWGKNSSGQLG 167
Score = 81 (33.6 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 23/97 (23%), Positives = 42/97 (43%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA 307
PRLI++ + ++ ++G +G +G G + P ++
Sbjct: 240 PRLIKELE--GIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISE 297
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ A VA G Y T VV+ G++Y++G E+ LG
Sbjct: 298 VP--YAEEVACGGYHTCVVTRGGELYTWGSNENGCLG 332
Score = 73 (30.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 277 DGRVCTWGWGRY------------GCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTF 324
D V TWGWG G LGHG++ + P +V +V+A+H++ G T
Sbjct: 369 DNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTA 428
Query: 325 VVSE 328
V E
Sbjct: 429 AVLE 432
Score = 62 (26.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G + TWG GCLG + P V+ + V+ G T +S D +V+++G
Sbjct: 318 GELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAIS-DNNVFTWG 376
Query: 337 CGES 340
G S
Sbjct: 377 WGGS 380
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 194 (73.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 51/160 (31%), Positives = 74/160 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
++ C +Q AG HS ++ GVV+ +GSNS+GQLG G T + + P ++SL
Sbjct: 166 QSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKT 225
Query: 98 XXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
T +S G V+ FG FG+ G K P+LV L V Q G
Sbjct: 226 VSISCGGEHTATLSKGGTVFTFGSGGFGQL--GHNSLKDEHHPRLVAELWGSKVSQVTCG 283
Query: 158 NFFTAVL-SREGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
T VL + R+Y+F G +LG+ + P P+L
Sbjct: 284 RHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVL 323
Score = 163 (62.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXX 105
Q G HS+A+++ G ++ +G N+ GQLG + + P+ ++SL
Sbjct: 122 QIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGN 181
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ ++S +G V+ +G +S G+ G + V P +V+SL V + G TA LS
Sbjct: 182 HSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFV--PTIVKSLSGKKTVSISCGGEHTATLS 239
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQI 207
+ G V+TF G +LGH++ + E HP L+ L V Q+
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSLKD--EHHPRLVAELWGSKVSQV 280
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 57/206 (27%), Positives = 87/206 (42%)
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 200
++ L N V+Q A G+ + LS +G++ F WG +A +LG E ++ L +L
Sbjct: 112 LKGLDNTKVIQIACGDQHSVALSNDGQL--FVWGENAHGQLGLRKEQALIQSPQHLQSLC 169
Query: 201 NIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQ 260
IPV QI SG+ V+ TD P +++ L +
Sbjct: 170 GIPVAQISAGGNHSFVLSL--SGV-VFGWGSNSAGQLGLGDTTDRFVPTIVKS--LSGKK 224
Query: 261 PXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
+ G V T+G G +G LGH + + E P++V L K V G
Sbjct: 225 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGR 284
Query: 321 YTTFV-VSEDGDVYSFGCGESASLGH 345
+ T V V+ +YSFGCG LG+
Sbjct: 285 HHTLVLVALTNRIYSFGCGMQGQLGN 310
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 52/219 (23%), Positives = 92/219 (42%)
Query: 87 RPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVES 145
RP++ L ++ +S+ GQ++ +G+++ G+ G++ + L+ SPQ ++S
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQL--GLRKEQALIQSPQHLQS 167
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 203
L I V Q + G + VLS G V F WG+++ +LG + P ++ +L
Sbjct: 168 LCGIPVAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTTDRFVP-TIVKSLSGKK 224
Query: 204 VVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXX 263
V I G V++ S DE HPRL+ + +
Sbjct: 225 TVSISCGGEHTATLS---KGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVT 281
Query: 264 XXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
R+ ++G G G LG+G + +SVP
Sbjct: 282 CGRHHTLVLVA-LTNRIYSFGCGMQGQLGNGEQVKQSVP 319
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG G LG G+ VP +V++L+ K + ++ G T +S+ G V++FG
Sbjct: 190 GVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGS 249
Query: 338 GESASLGHNAIAD 350
G LGHN++ D
Sbjct: 250 GGFGQLGHNSLKD 262
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 128 (50.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 40/121 (33%), Positives = 60/121 (49%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYA 118
T G+V + G GQLG G + E R +P T+ +S +GQVY+
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLE-RKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYS 90
Query: 119 FGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV F WG
Sbjct: 91 FGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTEDGRV--FLWG 144
Query: 177 N 177
+
Sbjct: 145 S 145
Score = 128 (50.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 42/142 (29%), Positives = 64/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 71 QAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +++ G+V+ +G SF + GV G + S V+ + VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 188 TTDGDLYTLGCGEQGQLGRVPE 209
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 73/317 (23%), Positives = 122/317 (38%)
Query: 34 LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGS--NSSGQLGH-GTTEEEWRPRPIR 90
++ G+ + + Q AG H+ A+T G V+ +GS +++G +G ++ P ++
Sbjct: 110 MVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 91 SLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEA----EY-----GVQGTKLVTSPQ 141
L ML +D G +Y G G+ E G QG + + P+
Sbjct: 170 -LDTQVVKVASGNDHLVMLTTD-GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPR 227
Query: 142 LVESLKN------IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
V LK+ + A G +FT +SREG VY F N +LG + P L
Sbjct: 228 CV-LLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNL 286
Query: 196 LGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKH-PRLIEQF 254
+ +N + G A YS+ +EK P LI +
Sbjct: 287 T-SFKNSTKSWVGFSGGQHHTVCMDSEGKA-YSLGRAEYGRLGLGEGAEEKSIPTLISRL 344
Query: 255 QLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE--CESVPKVVQALNDVK 312
+++ +DGRV WG G LG G E+ V + L + +
Sbjct: 345 PVVS----SVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLENRE 400
Query: 313 AIHVATGDYTTFVVSED 329
+ V++G T ++ +D
Sbjct: 401 VLTVSSGGQHTVLLVKD 417
Score = 106 (42.4 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 QDGRVCTWGWGR--YGCLGHGNEECES-VPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+DGRV WG R G +G +S VP VQ D + + VA+G+ +++ DGD+
Sbjct: 136 EDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DTQVVKVASGNDHLVMLTTDGDL 193
Query: 333 YSFGCGESASLG 344
Y+ GCGE LG
Sbjct: 194 YTLGCGEQGQLG 205
Score = 91 (37.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+GR G LG G EE +S+P ++ L V + VA G + VS+DG V+++G G + LG
Sbjct: 323 YGRLG-LGEGAEE-KSIPTLISRLPVVSS--VACGASVGYAVSKDGRVFAWGMGTNYQLG 378
Score = 91 (37.1 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 31/98 (31%), Positives = 45/98 (45%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
++ G V G+ G+ G + P LV L++ VVQA G T LS+ G+V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG-ESVLERKKPALVPLLQD--VVQAEAGGMHTVCLSQSGQV 88
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 207
Y+F ++ LG T E P G +E VVQ+
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 124
Score = 62 (26.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLG 344
G Y TF +S +G VY FG LG
Sbjct: 248 GAYFTFAISREGHVYGFGLSNYHQLG 273
Score = 62 (26.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 276 QDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGDYTTFVVSEDGDVY 333
++G V +G Y LG G C + N K+ + + G + T + +G Y
Sbjct: 257 REGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAY 316
Query: 334 SFGCGESASLG 344
S G E LG
Sbjct: 317 SLGRAEYGRLG 327
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 135 (52.6 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 48/165 (29%), Positives = 74/165 (44%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXT 107
A G H++ T G VY+ G N+ GQLG G TEE I T
Sbjct: 92 AACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNT 151
Query: 108 ML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+++ G+++ +G +S E + G++ V PQ V K I + G + +A ++
Sbjct: 152 SAALTEDGELFMWGDNS--EGQIGLENVTNVCVPQQVTVGKPISWISC--GYYHSAFVTT 207
Query: 167 EGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIP--VVQI 207
EG++YTF +LG + N P P+ G IP VVQ+
Sbjct: 208 EGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPG----IPGKVVQV 248
Score = 126 (49.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 34/130 (26%), Positives = 66/130 (50%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H+ VT +Y FGSN+ GQLG G+ +P +++L T++
Sbjct: 43 GDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVS 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGR 169
++ G+VYA G ++ E + G+ T+ ++ L+ + + Q + G+ +A L+ +G
Sbjct: 103 TEGGKVYAAGGNN--EGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGE 160
Query: 170 VYTFSWGNDA 179
+ F WG+++
Sbjct: 161 L--FMWGDNS 168
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 41/133 (30%), Positives = 63/133 (47%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLIS 111
HS VT++G +Y+FG G+LG + P+P+ + +L
Sbjct: 201 HSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLV-TS-PQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
A VY FG FG+ G+ GT L TS P+ +E +K+ + A G TA+++ G
Sbjct: 261 KA--VYTFGLGQFGQL--GL-GTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGL 315
Query: 170 VYTFSWGNDARLG 182
+YTF G +LG
Sbjct: 316 MYTFGDGRHGKLG 328
Score = 123 (48.4 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 43/143 (30%), Positives = 62/143 (43%)
Query: 42 RRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
+R+ Q AG S A+T G ++ +G NS GQ+G P+ +
Sbjct: 139 QRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWIS 196
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNF 159
+ ++ GQ+Y FG+ G+ G+ LV PQ V + VVQ A G
Sbjct: 197 CGYYHSAFVTTEGQLYTFGEPECGKL--GLPNQLLVNHRMPQPVPGIPGK-VVQVACGGG 253
Query: 160 FTAVLSREGRVYTFSWGNDARLG 182
T VL+ E VYTF G +LG
Sbjct: 254 HTVVLT-EKAVYTFGLGQFGQLG 275
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 35/120 (29%), Positives = 50/120 (41%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXXXXXXXX 105
Q G GH++ +T K V Y+FG GQLG GT E P+ I +
Sbjct: 247 QVACGGGHTVVLTEKAV-YTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGEN 305
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T LI+D G +Y FG G+ G++ + P L + V + G T V +
Sbjct: 306 HTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 108 (43.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V T+G G++G LG G E SVPK ++ + D K +A G+ T ++++ G +Y+FG G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 RHGKLG 328
Score = 96 (38.9 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T +++ ++Y FG +++G+ G + T V+ P V++LK V AA G T V +
Sbjct: 47 TAVVTGNNKLYMFGSNNWGQLGLGSKST--VSKPTCVKALKPEKVKFAACGRNHTLVSTE 104
Query: 167 EGRVYTFSWGNDARLG 182
G+VY N+ +LG
Sbjct: 105 GGKVYAAGGNNEGQLG 120
Score = 73 (30.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/69 (30%), Positives = 32/69 (46%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DG + WG G +G N VP+ V + I + G Y + V+ +G +Y+F
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVTTEGQLYTF 214
Query: 336 GCGESASLG 344
G E LG
Sbjct: 215 GEPECGKLG 223
Score = 72 (30.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+G++ T+G G LG N+ + +P+ V + K + VA G T V++E VY+
Sbjct: 208 EGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA-VYT 265
Query: 335 FGCGESASLG 344
FG G+ LG
Sbjct: 266 FGLGQFGQLG 275
Score = 42 (19.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 278 GRVCTWGWGRYGCLGHGNE 296
G + T+G GR+G LG G E
Sbjct: 314 GLMYTFGDGRHGKLGLGLE 332
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 134 (52.2 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H+ VT +Y FGSN+ GQLG G+ +P I++L T++
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVS 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D G VYA G ++ G+ G + T Q+V + Q + G +A L+ +G++
Sbjct: 103 TDTGGVYAAGGNNEGQLGLGDTDDR-DTFHQIVFFTPADTIKQLSAGANTSAALTEDGKL 161
Query: 171 YTFSWGNDA--RLGHHTEPNDVEPH 193
F WG+++ ++G + N PH
Sbjct: 162 --FMWGDNSEGQIGLEDKSNVCIPH 184
Score = 127 (49.8 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 43/163 (26%), Positives = 72/163 (44%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXT 107
A G H++ T G VY+ G N+ GQLG G T++ I T
Sbjct: 92 AACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANT 151
Query: 108 ML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+++ G+++ +G +S E + G++ V P V K I + G + +A ++
Sbjct: 152 SAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEVTVGKPISWISC--GYYHSAFVTM 207
Query: 167 EGRVYTFSWGNDARLGHHTE--PNDVEPHPLLGTLENIPVVQI 207
+G +YTF + +LG E N P +LG E V+Q+
Sbjct: 208 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER--VIQV 248
Score = 119 (46.9 bits), Expect = 0.00077, P = 0.00076
Identities = 40/131 (30%), Positives = 60/131 (45%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS VT G +Y+FG +G+LG P R L ++
Sbjct: 201 HSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 260
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLV-TS-PQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
VYAFG FG+ G+ GT L TS P+++E +K+ + + G TA+++ G +Y
Sbjct: 261 KVVYAFGLGQFGQL--GL-GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLY 317
Query: 172 TFSWGNDARLG 182
TF G +LG
Sbjct: 318 TFGDGRHGKLG 328
Score = 108 (43.1 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 280 VCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V +G G++G LG G E S PK+++ + D K H++ G+ T +++E G +Y+FG G
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322
Query: 339 ESASLG 344
LG
Sbjct: 323 RHGKLG 328
Score = 106 (42.4 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 40/138 (28%), Positives = 59/138 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG S A+T G ++ +G NS GQ+G P + ++
Sbjct: 144 QLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEV-TVGKPISWISCGYYHS 202
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT--SPQLVESLKNIFVVQAAIGNFFTAVL 164
+ D G++Y FG+ G+ G+ L+ SPQ V + V+Q A G T VL
Sbjct: 203 AFVTMD-GELYTFGEPENGKL--GLPNELLMNHRSPQRVLGIPER-VIQVACGGGHTVVL 258
Query: 165 SREGRVYTFSWGNDARLG 182
+ E VY F G +LG
Sbjct: 259 T-EKVVYAFGLGQFGQLG 275
Score = 71 (30.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG + T+G G LG NE + P+ V + + + I VA G T V++E VY+
Sbjct: 208 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEKV-VYA 265
Query: 335 FGCGESASLG 344
FG G+ LG
Sbjct: 266 FGLGQFGQLG 275
Score = 59 (25.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
L+ D G V+ FGK F E P KN + + G+ TA+++
Sbjct: 7 LVPDTGAVFTFGKTKFAE-----------NIPSKFW-FKNDIPICLSCGDEHTAIVTGNN 54
Query: 169 RVYTFSWGNDARLGHHTEPNDVEP 192
++Y F N +LG ++ ++P
Sbjct: 55 KLYMFGSNNWGQLGLGSKAAIIKP 78
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 278 GRVCTWGWGRYGCLGHGNE 296
G + T+G GR+G LG G E
Sbjct: 314 GLLYTFGDGRHGKLGLGME 332
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 130 (50.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQ-ALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+G + WG +YG LG G+ +SVPK V+ +L VK +A G+ T +++++ DV++F
Sbjct: 288 EGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTF 347
Query: 336 GCGESASLGHNAI 348
G E LGH +I
Sbjct: 348 GSNEFYQLGHGSI 360
Score = 116 (45.9 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 34/141 (24%), Positives = 62/141 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ +TS+ ++S G N +GQLG + P P+ +L + I
Sbjct: 82 GFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAI 141
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKL-------VTSPQLVESLK------NIFVVQAAIG 157
++AG +Y +G ++G+ G KL + +P + ++ K N+ G
Sbjct: 142 TEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFG 201
Query: 158 NFFTAVLSREGRVYTFSWGND 178
T +S G + FSWG++
Sbjct: 202 AQHTIAISTTGAI--FSWGSN 220
Score = 86 (35.3 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
G H+IA+++ G ++S+GSN GQLG G + P PI
Sbjct: 201 GAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPI 239
Score = 85 (35.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVE-SLKNIFVVQAAIGNFFTAVLSR 166
L++ G ++ +G + +G+ G QG L S P+ V+ SL+ + + + A+GN T +L++
Sbjct: 284 LLTLEGDLFLWGSNQYGQL--G-QGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILLTK 340
Query: 167 EGRVYTFSWGNDARLGH 183
E V+TF +LGH
Sbjct: 341 EQDVFTFGSNEFYQLGH 357
Score = 72 (30.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE---WRPRPIRS------------LXX 94
AG S A+T G +Y +GS++ GQLG+G + + P I +
Sbjct: 133 AGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQN 192
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP 140
T+ IS G ++++G + +G+ G KLV P
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVP 238
Score = 70 (29.7 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 19/79 (24%), Positives = 41/79 (51%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+L++ ++++ G + G+ G++ P V++L V++ GN +A ++
Sbjct: 86 TLLLTSEYKIFSMGFNQTGQL--GIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITE 143
Query: 167 EGRVYTFSWGNDA--RLGH 183
G +Y WG+ A +LG+
Sbjct: 144 AGDLYC--WGSSAYGQLGN 160
Score = 56 (24.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHV-ATGDYTT 323
G + +WG +YG LG G+ + VP + N +A H+ + G+ T
Sbjct: 212 GAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVT 260
Score = 52 (23.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 131 VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
V G K T ++V + VV + G T +L+ E ++++ + +LG +
Sbjct: 59 VMGRKHTTLFKIVWKRR---VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSA 115
Query: 191 EPHPLLGTLENIPVVQI 207
P P+ TL V++I
Sbjct: 116 VPLPV-DTLSKFNVIKI 131
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 139 (54.0 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 41/136 (30%), Positives = 59/136 (43%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G ++ GS S G+ G T ++P+ I + + +
Sbjct: 493 HALLVADDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVISTACNNGSSSV 552
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y T LVT LK FV Q A+G T VL + G
Sbjct: 553 ISKDGELYMFGKDAI----YS-DSTSLVTD------LKGHFVTQVAMGKAHTCVLMKNGE 601
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 602 VWTFGVNNKGQCGRDT 617
Score = 114 (45.2 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T ++ DG V++F
Sbjct: 857 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAILLMDGQVFTF 915
Query: 336 GCGESASLG 344
G LG
Sbjct: 916 GSFSKGQLG 924
Score = 90 (36.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
P V+ +++A+ V+ G + + ++ E+GDVY+FG G+ LGH + + + C L
Sbjct: 831 PGAVRFDCELRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 885
Score = 65 (27.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+Q G H+ + G V++FG N+ GQ G T
Sbjct: 584 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 617
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 141 (54.7 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 41/152 (26%), Positives = 79/152 (51%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
Q+I+ G H+ VT +G V+ +G+ +SG+LG + P+ + SL
Sbjct: 295 QSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDH 354
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVL 164
T ++++G++Y +G D G E G++ +T ++ + L ++ V+ A G + TA++
Sbjct: 355 QTCAVTESGELYLWGIDG-GTIEQS--GSQFLTR-KISDVLGGSLTVLSVACGAWHTAIV 410
Query: 165 SREGRVYTFSWGNDARLGHH-----TEPNDVE 191
+ G+++T+ G LGH T+P +VE
Sbjct: 411 TSSGQLFTYGSGTFGVLGHGSLESVTKPKEVE 442
Score = 114 (45.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 60 SKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAF 119
S G ++++G G+LGH ++ + P + L T+ +S +G VY
Sbjct: 476 SCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTM 535
Query: 120 GKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
G G+ G K + ++ +L FV A G+ AVL+ G VYT+ G +
Sbjct: 536 GSSIHGQL--GCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNG 593
Query: 180 RLG 182
+LG
Sbjct: 594 QLG 596
Score = 113 (44.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 43/159 (27%), Positives = 66/159 (41%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H+ VTS G ++++GS + G LGHG+ E +P+ + SL T I
Sbjct: 403 GAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAI 462
Query: 111 SDAGQVYAF------GK-DSFGEAEYGVQG---TKLVTSPQLVESLKNIFVVQAAIGNFF 160
+ F GK ++G+ + G G +K P V L + ++ + G
Sbjct: 463 VETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTL 522
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTL 199
T LS G VYT +LG D + +LG L
Sbjct: 523 TVALSISGTVYTMGSSIHGQLGC-PRAKDKSVNVVLGNL 560
Score = 105 (42.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSED-------- 329
G++ T+G G +G LGHG+ E + PK V++L +K I V+ G + T + E
Sbjct: 414 GQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYN 473
Query: 330 ----GDVYSFGCGESASLGH 345
G ++++G G+ LGH
Sbjct: 474 AKSCGKLFTWGDGDKGRLGH 493
Score = 98 (39.6 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G++ TWG G G LGH + + + VP V L D I V+ G T +S G VY+ G
Sbjct: 478 GKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGS 537
Query: 338 GESASLG 344
LG
Sbjct: 538 SIHGQLG 544
Score = 77 (32.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 23/68 (33%), Positives = 42/68 (61%)
Query: 139 SPQLVESLKNIFVVQA-AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPL-L 196
SP+L+ES +F VQ+ ++G A+++R+G V+ + GN +LG D++ HP +
Sbjct: 282 SPKLLESA-TMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNI-DID-HPKRV 338
Query: 197 GTLENIPV 204
+LE++ V
Sbjct: 339 ESLEDVAV 346
Score = 73 (30.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V T G +G LG + +SV V+ L +A+G + V++ G+VY++G
Sbjct: 530 GTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGK 589
Query: 338 GESASLGHNAIAD 350
G + LG + D
Sbjct: 590 GMNGQLGLGDVRD 602
Score = 65 (27.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G V TWG G G LG G+ + P +V+ L D +A G
Sbjct: 582 GNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACG 623
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 190 (71.9 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 48/160 (30%), Positives = 73/160 (45%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
++ C +Q AG HS ++ GVV+ +GSNS+GQLG G T++ + P ++SL
Sbjct: 163 QSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKT 222
Query: 98 XXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
T +S G V+ FG FG+ G K P+L+ L V Q G
Sbjct: 223 VSISCGGEHTATLSKGGTVFTFGSGGFGQL--GHNSLKDEHHPRLIAELWGSKVSQVTCG 280
Query: 158 NFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPLL 196
T V + +Y+F G +LG+ + P P+L
Sbjct: 281 RHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVL 320
Score = 165 (63.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 52/169 (30%), Positives = 85/169 (50%)
Query: 44 ENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXX 99
EN Q I G HS+A+++ G ++ +G N+ GQLG + + P+ ++SL
Sbjct: 113 ENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQ 172
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ ++S +G V+ +G +S G+ G+ TK P +V+SL V + G
Sbjct: 173 ISAGGNHSFVLSLSGVVFGWGSNSAGQL--GLGDTKDRFVPTIVKSLCGKKTVSISCGGE 230
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQI 207
TA LS+ G V+TF G +LGH++ + E HP L+ L V Q+
Sbjct: 231 HTATLSKGGTVFTFGSGGFGQLGHNSLKD--EHHPRLIAELWGSKVSQV 277
Score = 158 (60.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 52/204 (25%), Positives = 83/204 (40%)
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
++SL+N V+Q A G+ + LS +G+++ + +LG E + L +L I
Sbjct: 109 LKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEI 168
Query: 203 PVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPX 262
PV QI SG+ V+ D P +++ L +
Sbjct: 169 PVAQISAGGNHSFVLSL--SGV-VFGWGSNSAGQLGLGDTKDRFVPTIVKS--LCGKKTV 223
Query: 263 XXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYT 322
+ G V T+G G +G LGH + + E P+++ L K V G +
Sbjct: 224 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHH 283
Query: 323 TFVVSEDGD-VYSFGCGESASLGH 345
T V E +YSFGCG LG+
Sbjct: 284 TLVFEESSKLIYSFGCGMQGQLGN 307
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 87 RPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVES 145
RP++SL +M +S+ GQ++ +G+++ G+ G++ + T SPQ ++S
Sbjct: 107 RPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQL--GLRKEQAGTQSPQHLQS 164
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 203
L I V Q + G + VLS G V F WG+++ +LG + P ++ +L
Sbjct: 165 LCEIPVAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTKDRFVP-TIVKSLCGKK 221
Query: 204 VVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXX 263
V I G V++ S DE HPRLI + L +
Sbjct: 222 TVSISCGGEHTATLS---KGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAE--LWGSKVSQ 276
Query: 264 XXXXXXXXXXXGQDGR-VCTWGWGRYGCLGHGNEECESVP 302
+ + + ++G G G LG+G + +SVP
Sbjct: 277 VTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVP 316
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG G LG G+ + VP +V++L K + ++ G T +S+ G V++FG
Sbjct: 187 GVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGS 246
Query: 338 GESASLGHNAIAD 350
G LGHN++ D
Sbjct: 247 GGFGQLGHNSLKD 259
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
++ C ++ G H+ ++ G V++FGS GQLGH + ++E PR I L
Sbjct: 215 KSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKV 274
Query: 98 XXXXXXXXXTMLISDAGQ-VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
T++ ++ + +Y+FG G+ G Q + V P L+ + F ++ I
Sbjct: 275 SQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLI 334
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 162 (62.1 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 47/156 (30%), Positives = 72/156 (46%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + L
Sbjct: 371 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVS 430
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAI 156
T+ ++D GQ+YAFG D YG G V+ P+++E ++ N F V Q +
Sbjct: 431 CGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSC 485
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
G+ VL+R VY++ G RLG +E + P
Sbjct: 486 GDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 521
Score = 94 (38.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 35/147 (23%), Positives = 56/147 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q G H + +T VYS+G G+LG + E+ + P+ +
Sbjct: 482 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDG 541
Query: 107 TMLISDAGQVYAFGKDSFG-----EAEYGV------QGTKLVTSPQLVESLKNIFVVQAA 155
T L++ +G+V A G + F + G+ TS L + L + A
Sbjct: 542 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 601
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLG 182
G TA + GR+ TF +LG
Sbjct: 602 PGKTHTAAIDERGRLLTFGCNKCGQLG 628
Score = 74 (31.1 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 614 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 673
Query: 337 CGESASL 343
G + L
Sbjct: 674 NGGNGRL 680
Score = 53 (23.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ + L+ K +A G T + E G + +FGC + LG
Sbjct: 588 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 628
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 162 (62.1 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 47/156 (30%), Positives = 72/156 (46%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + L
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVS 432
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAI 156
T+ ++D GQ+YAFG D YG G V+ P+++E ++ N F V Q +
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSC 487
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
G+ VL+R VY++ G RLG +E + P
Sbjct: 488 GDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 523
Score = 94 (38.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 35/147 (23%), Positives = 56/147 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q G H + +T VYS+G G+LG + E+ + P+ +
Sbjct: 484 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDG 543
Query: 107 TMLISDAGQVYAFGKDSFG-----EAEYGV------QGTKLVTSPQLVESLKNIFVVQAA 155
T L++ +G+V A G + F + G+ TS L + L + A
Sbjct: 544 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 603
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLG 182
G TA + GR+ TF +LG
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 74 (31.1 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 337 CGESASL 343
G + L
Sbjct: 676 NGGNGRL 682
Score = 53 (23.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ + L+ K +A G T + E G + +FGC + LG
Sbjct: 590 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 48/162 (29%), Positives = 81/162 (50%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLXXXXXXXXXXXXX 105
Q G HS+A++ G ++++G N GQLG G P+ + L
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M +S +G +Y++GK+ G+ G+ T+ P L+E L N V A G +A+L+
Sbjct: 202 HSMALSMSGNIYSWGKNECGQL--GLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLT 259
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
++G ++TF G +LGH++ N++ P L+ L V QI
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPC-LVAELVGYRVTQI 300
Score = 177 (67.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 48/151 (31%), Positives = 72/151 (47%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q AG HS+A++ G +YS+G N GQLG G TE + P I L
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVL 164
+ L++ G ++ FG G+ G T+ P LV L V Q A G + T A +
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQL--GHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYV 311
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
S G+V++F G D +LG+ + + P P+
Sbjct: 312 SDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 61/244 (25%), Positives = 100/244 (40%)
Query: 112 DAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
D G + S G+ EY K + +++ K ++Q G++ + LS+ G +
Sbjct: 103 DQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKK---IIQITCGDYHSLALSKGGEL 159
Query: 171 YTFSWGND--ARLGHHTE-PNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
F+WG + +LG + P+ P ++ L +P+ QI SG +Y
Sbjct: 160 --FAWGQNLHGQLGVGRKFPSTTTPQ-IVEHLAGVPLAQISAGEAHSMALSM--SGN-IY 213
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
S + P LIE N + QDG + T+G G+
Sbjct: 214 SWGKNECGQLGLGHTESKDDPSLIEGLD--NQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFV-VSEDGDVYSFGCGESASLGHN 346
+G LGH + + E P +V L + +A G + T VS+ G V+SFG G+ LG+
Sbjct: 272 HGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 347 AIAD 350
D
Sbjct: 332 GTRD 335
Score = 130 (50.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML- 109
G HS +T G++++FG+ GQLGH +T+ E RP + L T+
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAY 310
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNI 149
+SD G+V++FG G+ G +L+ P V S + +
Sbjct: 311 VSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEEL 350
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 53/206 (25%), Positives = 93/206 (45%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL--VTSPQLVESLKNIFVVQAAIGNFFTAVL 164
++ +S G+++A+G++ G+ GV G K T+PQ+VE L + + Q + G + L
Sbjct: 150 SLALSKGGELFAWGQNLHGQL--GV-GRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 206
Query: 165 SREGRVYTFSWGND--ARLG-HHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQP 221
S G +Y SWG + +LG HTE D +P + G L+N V+ Q
Sbjct: 207 SMSGNIY--SWGKNECGQLGLGHTESKD-DPSLIEG-LDN-QKVEFVACGGSHSALLTQ- 260
Query: 222 SGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRV 280
G+ +++ S +E P L+ + L+ + D G+V
Sbjct: 261 DGL-LFTFGAGKHGQLGHNSTQNELRPCLVAE--LVGYRVTQIACGRWHTLAYVSDLGKV 317
Query: 281 CTWGWGRYGCLGHGNEECESVPKVVQ 306
++G G+ G LG+G + +P V+
Sbjct: 318 FSFGSGKDGQLGNGGTRDQLMPLPVK 343
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 161 (61.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 47/156 (30%), Positives = 71/156 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + L
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVS 432
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAI 156
T+ ++D GQ+YAFG D YG G V P+++E ++ N F V Q +
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSC 487
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
G+ VL+R VY++ G RLG +E + P
Sbjct: 488 GDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 523
Score = 94 (38.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 35/147 (23%), Positives = 57/147 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q G H + +T VYS+G G+LG + E+ + P+ +
Sbjct: 484 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDG 543
Query: 107 TMLISDAGQVYAFGKDSFG-----EAEYGVQGTKL------VTSPQLVESLKNIFVVQAA 155
T L++ +G+V A G + F + G+ + TS L + L + A
Sbjct: 544 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIA 603
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLG 182
G TA + GR+ TF +LG
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 74 (31.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 337 CGESASL 343
G + L
Sbjct: 676 NGGNGRL 682
Score = 53 (23.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ + L+ K +A G T + E G + +FGC + LG
Sbjct: 590 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 161 (61.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 47/156 (30%), Positives = 71/156 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + L
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVS 432
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAI 156
T+ ++D GQ+YAFG D YG G V P+++E ++ N F V Q +
Sbjct: 433 CGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSC 487
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
G+ VL+R VY++ G RLG +E + P
Sbjct: 488 GDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 523
Score = 95 (38.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 35/147 (23%), Positives = 56/147 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q G H + +T VYS+G G+LG + E+ + P+ +
Sbjct: 484 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDG 543
Query: 107 TMLISDAGQVYAFGKDSFG-----EAEYGV------QGTKLVTSPQLVESLKNIFVVQAA 155
T L++ +G+V A G + F + G+ TS L + L + A
Sbjct: 544 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 603
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLG 182
G TA + GR+ TF +LG
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 74 (31.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 337 CGESASL 343
G + L
Sbjct: 676 NGGNGRL 682
Score = 53 (23.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ + L+ K +A G T + E G + +FGC + LG
Sbjct: 590 LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 132 (51.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 40/136 (29%), Positives = 57/136 (41%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G V+ GS S G+ G ++P+ I + + +
Sbjct: 569 HALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSV 628
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 629 ISKDGELYMFGKDAI----YS-------DSSSLVSDLKGHFVTQVAMGKAHTCVLMKNGE 677
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 678 VWTFGVNNKGQCGRDT 693
Score = 115 (45.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 933 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLVMDGQVFTF 991
Query: 336 GCGESASLG 344
G LG
Sbjct: 992 GSFSKGQLG 1000
Score = 93 (37.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+V+A+ V+ G + + V+ E+GDVY+FG G+ LGH + + + C L
Sbjct: 915 EVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 961
Score = 65 (27.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+Q G H+ + G V++FG N+ GQ G T
Sbjct: 660 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 693
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 161 (61.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 47/156 (30%), Positives = 71/156 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + L
Sbjct: 392 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVS 451
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIF----VVQAAI 156
T+ ++D GQ+YAFG D YG G V P+++E ++ N F V Q +
Sbjct: 452 CGDDFTVCVTDEGQLYAFGSDY-----YGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSC 506
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
G+ VL+R VY++ G RLG +E + P
Sbjct: 507 GDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 542
Score = 96 (38.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 35/147 (23%), Positives = 56/147 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q G H + +T VYS+G G+LG + E+ + P+ +
Sbjct: 503 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDG 562
Query: 107 TMLISDAGQVYAFGKDSFG-----EAEYGV------QGTKLVTSPQLVESLKNIFVVQAA 155
T L++ +G+V A G + F + G+ TS L + L + A
Sbjct: 563 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVA 622
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLG 182
G TA + GR+ TF +LG
Sbjct: 623 PGKTHTAAIDERGRLLTFGCNKCGQLG 649
Score = 74 (31.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 635 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 694
Query: 337 CGESASL 343
G + L
Sbjct: 695 NGGNGRL 701
Score = 54 (24.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ + L+ K VA G T + E G + +FGC + LG
Sbjct: 609 LAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLG 649
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 136 (52.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 40/136 (29%), Positives = 58/136 (42%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G ++ GS S G+ G T ++P+ I + + +
Sbjct: 468 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 527
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 528 ISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGE 576
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 577 VWTFGVNNKGQCGRDT 592
Score = 115 (45.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 832 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 890
Query: 336 GCGESASLG 344
G LG
Sbjct: 891 GSFSKGQLG 899
Score = 90 (36.7 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + + C L
Sbjct: 814 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 860
Score = 65 (27.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+Q G H+ + G V++FG N+ GQ G T
Sbjct: 559 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 592
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 204 (76.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 86/353 (24%), Positives = 137/353 (38%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRREN--SQAIAGP-----G 53
M +R++ ++ ++ + G L L E CR + S+ A P G
Sbjct: 304 MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
+ V+ VY +GSNSS QL GT E+ +P+ S T +IS
Sbjct: 364 DTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYC--TFVISTD 421
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREGRVYT 172
G V A GK S+G G + E ++I V ++ G+ T + EG V++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXX 232
+ G+ +LGH P + G L+ VV + +Y+
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE---LYTWGEG 538
Query: 233 XXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCTWGWGRYGCL 291
P L++ N+ +DGR V ++G G G L
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
GHG+ PKV++AL + V G ++ ++ G VY++GCG A LG
Sbjct: 595 GHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG 645
Score = 199 (75.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 64/277 (23%), Positives = 119/277 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXX 104
S + GH++A T++G V+S+G G+LGHG + + P+ I+ L
Sbjct: 461 SSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGY 520
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +++ G++Y +G+ FG +G ++ + P LV+ + N V + + G+ T L
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHTIAL 576
Query: 165 SREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
S++GR V++F G++ +LGH + N V ++ L+ + + ++ +G
Sbjct: 577 SKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TG 633
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
VY+ T + P+LIE+ + D V W
Sbjct: 634 Q-VYAWGCGACLGCGSSEATALR-PKLIEELAATRI--VDISIGDSHCLALSHDNEVYAW 689
Query: 284 GWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
G G G GN + PK V L+ + ++ G
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Score = 198 (74.8 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 73/314 (23%), Positives = 133/314 (42%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLXXXXXX 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 157
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 464 KGSDGH--TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXX 217
+A ++ +G +YT+ G+ RLGH + N L+ + N+ V
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK 578
Query: 218 XXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD 277
G V+S P++IE Q + ++
Sbjct: 579 ----DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--T 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 193 (73.0 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 62/241 (25%), Positives = 107/241 (44%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVIST 420
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMA 225
+G V G+ RLG N L T E + + ++ +
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGE 478
Query: 226 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGW 285
V+S + + +K+P+LI Q L +DG + TWG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGE 537
Query: 286 GRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLG 344
G +G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LG
Sbjct: 538 GDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595
Query: 345 H 345
H
Sbjct: 596 H 596
Score = 191 (72.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 66/301 (21%), Positives = 123/301 (40%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q I G + + + G V + G S G+LG G +++ I +L
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4085
Query: 107 ---TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4086 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAV 4143
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+ G
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4200
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V++ + T + P+ ++ + ++ +DG V T+
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT--KDGHVYTF 4258
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4259 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4318
Query: 344 G 344
G
Sbjct: 4319 G 4319
Score = 177 (67.4 bits), Expect = 6.1e-08, Sum P(3) = 6.1e-08
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L
Sbjct: 4124 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4183
Query: 98 XXXXXXXXXTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4184 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4241
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG 182
G F+ L+++G VYTF G D +G
Sbjct: 4242 GTQFSVALTKDGHVYTF--GQDRLIG 4265
Score = 43 (20.2 bits), Expect = 6.1e-08, Sum P(3) = 6.1e-08
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G V WG G LG G+ P +V L ++ G
Sbjct: 4305 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAG 4346
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 319 GDYTTFVVSEDGDVYSFGC-GESASLGHNAIADGQV--CSLLFLS 360
GD+ T V+ + SFG GE L + ++ C + + S
Sbjct: 2131 GDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSS 2175
Score = 37 (18.1 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY--SFGCGESASLGHNAIADGQ 352
PKVVQ+L D+ + ++S+ G + SFG GE G + G+
Sbjct: 1835 PKVVQSLLDLLCSQLKN------LLSQAGVLLMASFGEGEEDEEGKKIDSSGE 1881
Score = 37 (18.1 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 10 PMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPG 53
P E E ++ + + + K+ FL A E R+ + +G G
Sbjct: 1366 PEPEDEEEEREHEVMTAGKIFQCFLSAREVARSRDRDRMNSGAG 1409
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 204 (76.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 86/353 (24%), Positives = 137/353 (38%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRREN--SQAIAGP-----G 53
M +R++ ++ ++ + G L L E CR + S+ A P G
Sbjct: 304 MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
+ V+ VY +GSNSS QL GT E+ +P+ S T +IS
Sbjct: 364 DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYC--TFVISTD 421
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREGRVYT 172
G V A GK S+G G + E ++I V ++ G+ T + EG V++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXX 232
+ G+ +LGH P + G L+ VV + +Y+
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE---LYTWGEG 538
Query: 233 XXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCTWGWGRYGCL 291
P L++ N+ +DGR V ++G G G L
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
GHG+ PKV++AL + V G ++ ++ G VY++GCG A LG
Sbjct: 595 GHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG 645
Score = 199 (75.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 64/277 (23%), Positives = 119/277 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXX 104
S + GH++A T++G V+S+G G+LGHG + + P+ I+ L
Sbjct: 461 SSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGY 520
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +++ G++Y +G+ FG +G ++ + P LV+ + N V + + G+ T L
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHTIAL 576
Query: 165 SREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
S++GR V++F G++ +LGH + N V ++ L+ + + ++ +G
Sbjct: 577 SKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TG 633
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
VY+ T + P+LIE+ + D V W
Sbjct: 634 Q-VYAWGCGACLGCGSSEATALR-PKLIEELAATRI--VDISIGDSHCLALSHDNEVYAW 689
Query: 284 GWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
G G G GN + PK V L+ + ++ G
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Score = 198 (74.8 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 73/314 (23%), Positives = 133/314 (42%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLXXXXXX 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 157
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 464 KGSDGH--TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXX 217
+A ++ +G +YT+ G+ RLGH + N L+ + N+ V
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK 578
Query: 218 XXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD 277
G V+S P++IE Q + ++
Sbjct: 579 ----DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--T 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 191 (72.3 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 66/301 (21%), Positives = 123/301 (40%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q I G + + + G V + G S G+LG G +++ I +L
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4088
Query: 107 ---TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4089 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAV 4146
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+ G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4203
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V++ + T + P+ ++ + ++ +DG V T+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT--KDGHVYTF 4261
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321
Query: 344 G 344
G
Sbjct: 4322 G 4322
Score = 190 (71.9 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 61/239 (25%), Positives = 106/239 (44%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGH 345
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Score = 177 (67.4 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4186
Query: 98 XXXXXXXXXTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4187 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4244
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG 182
G F+ L+++G VYTF G D +G
Sbjct: 4245 GTQFSVALTKDGHVYTF--GQDRLIG 4268
Score = 43 (20.2 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G V WG G LG G+ P +V L ++ G
Sbjct: 4308 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAG 4349
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 319 GDYTTFVVSEDGDVYSFGC-GESASLGHNAIADGQV--CSLLFLS 360
GD+ T V+ + SFG GE L + ++ C + + S
Sbjct: 2132 GDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSS 2176
Score = 38 (18.4 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 10 PMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPG 53
P E E ++ + + + K+ FL A E R+ + +G G
Sbjct: 1366 PEPEDEEEEREHEVMTAGKIFQCFLSAREVARSRDRDRMSSGAG 1409
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 204 (76.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 86/353 (24%), Positives = 137/353 (38%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRREN--SQAIAGP-----G 53
M +R++ ++ ++ + G L L E CR + S+ A P G
Sbjct: 304 MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
+ V+ VY +GSNSS QL GT E+ +P+ S T +IS
Sbjct: 364 DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYC--TFVISTD 421
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREGRVYT 172
G V A GK S+G G + E ++I V ++ G+ T + EG V++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXX 232
+ G+ +LGH P + G L+ VV + +Y+
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE---LYTWGEG 538
Query: 233 XXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCTWGWGRYGCL 291
P L++ N+ +DGR V ++G G G L
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
GHG+ PKV++AL + V G ++ ++ G VY++GCG A LG
Sbjct: 595 GHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG 645
Score = 199 (75.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 64/277 (23%), Positives = 119/277 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXX 104
S + GH++A T++G V+S+G G+LGHG + + P+ I+ L
Sbjct: 461 SSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGY 520
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +++ G++Y +G+ FG +G ++ + P LV+ + N V + + G+ T L
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHTIAL 576
Query: 165 SREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
S++GR V++F G++ +LGH + N V ++ L+ + + ++ +G
Sbjct: 577 SKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TG 633
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
VY+ T + P+LIE+ + D V W
Sbjct: 634 Q-VYAWGCGACLGCGSSEATALR-PKLIEELAATRI--VDVSIGDSHCLALSHDNEVYAW 689
Query: 284 GWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
G G G GN + PK V L+ + ++ G
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Score = 199 (75.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 74/314 (23%), Positives = 133/314 (42%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLXXXXXX 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 157
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 464 KGSDGH--TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXX 217
+A ++ +G +YT+ G+ RLGH + N L+ + N+ V
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK 578
Query: 218 XXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD 277
G V+S P++IE Q + ++
Sbjct: 579 ----DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--T 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + V+ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 193 (73.0 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 67/301 (22%), Positives = 124/301 (41%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q I G + + + G V + G S G+LG G +++ I +L
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 107 ---TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+ G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4205
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V++ + T + P+ I+ + ++ +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALT--KDGHVYTF 4263
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ +GDVY++G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 344 G 344
G
Sbjct: 4324 G 4324
Score = 190 (71.9 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 61/239 (25%), Positives = 106/239 (44%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGH 345
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Score = 176 (67.0 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 47/146 (32%), Positives = 70/146 (47%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 XXXXXXXXXTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
T+ +S D V+AFG +G+ G K +SPQ ++ L I + + A
Sbjct: 4189 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKIDVLCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG 182
G F+ L+++G VYTF G D +G
Sbjct: 4247 GTQFSVALTKDGHVYTF--GQDRLIG 4270
Score = 44 (20.5 bits), Expect = 6.3e-08, Sum P(3) = 6.3e-08
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
+G V WG G LG G+ P +V L ++ G
Sbjct: 4309 NGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4351
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 319 GDYTTFVVSEDGDVYSFGC-GESASLGHNAIADGQV--CSLLFLS 360
GD+ T V+ + SFG GE L + ++ C + + S
Sbjct: 2134 GDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSS 2178
Score = 37 (18.1 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 10 PMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPG 53
P E E ++ + + + K+ FL A E R+ + +G G
Sbjct: 1366 PEPEDEEEEREHEVMTAGKIFQCFLSAREVARSRDRDRMNSGAG 1409
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 204 (76.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 86/353 (24%), Positives = 137/353 (38%)
Query: 1 MCQKRAIFKPMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRREN--SQAIAGP-----G 53
M +R++ ++ ++ + G L L E CR + S+ A P G
Sbjct: 304 MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
+ V+ VY +GSNSS QL GT E+ +P+ S T +IS
Sbjct: 364 DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYC--TFVISTD 421
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF-FTAVLSREGRVYT 172
G V A GK S+G G + E ++I V ++ G+ T + EG V++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481
Query: 173 FSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXX 232
+ G+ +LGH P + G L+ VV + +Y+
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE---LYTWGEG 538
Query: 233 XXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGR-VCTWGWGRYGCL 291
P L++ N+ +DGR V ++G G G L
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
GHG+ PKV++AL + V G ++ ++ G VY++GCG A LG
Sbjct: 595 GHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG 645
Score = 201 (75.8 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 65/277 (23%), Positives = 119/277 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXX 104
S + GH++A T++G V+S+G G+LGHG + + P+ I+ L
Sbjct: 461 SSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGY 520
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +++ G++Y +G+ FG +G ++ + P LV+ + N V + + G+ T L
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHTIAL 576
Query: 165 SREGR-VYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
S++GR V++F G++ +LGH + N V ++ L+ + + ++ +G
Sbjct: 577 SKDGRTVWSFGGGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--TG 633
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
VY+ T + P+LIE+ + D V W
Sbjct: 634 Q-VYAWGCGACLGCGSSEATALR-PKLIEELAATRI--VDISIGDSHCLALSHDNEVYAW 689
Query: 284 GWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
G G G GN + PK V L+ V ++ G
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726
Score = 198 (74.8 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 73/314 (23%), Positives = 133/314 (42%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLXXXXXX 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 157
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 464 KGSDGH--TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXX 217
+A ++ +G +YT+ G+ RLGH + N L+ + N+ V
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK 578
Query: 218 XXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD 277
G V+S P++IE Q + ++
Sbjct: 579 ----DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS--T 632
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD +S D +VY++G
Sbjct: 633 GQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Query: 337 ------CGESASLG 344
CG+ S G
Sbjct: 691 NNSMGQCGQGNSTG 704
Score = 190 (71.9 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 61/239 (25%), Positives = 106/239 (44%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++S+ +VY +G +S + G Q + + P+L S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESASLGH 345
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Score = 183 (69.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 65/303 (21%), Positives = 124/303 (40%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q + G + + + G V + G S G+LG G +++ I +L
Sbjct: 4031 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4090
Query: 107 ---TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4091 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+ G
Sbjct: 4149 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTD--G 4205
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V++ + T + P+ ++ + ++ +DG V T+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALT--KDGHVYTF 4263
Query: 284 GWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESA 341
G +G G + P+ V L+ V +A G T +S GDVY++G
Sbjct: 4264 GQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEG 4323
Query: 342 SLG 344
LG
Sbjct: 4324 QLG 4326
Score = 175 (66.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 55/177 (31%), Positives = 83/177 (46%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA E Q G HS VT+ G +++FG+ G+LG G T + P + +L
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4188
Query: 98 XXXXXXXXXTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4189 GQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDILCGIGIKKVAC 4246
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG-------HHTEPNDVEPHPLL-GT-LENIPV 204
G F+ L+++G VYTF +D +G +H P V P+L G +E+I V
Sbjct: 4247 GTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQV---PVLSGVFIEDIAV 4300
Score = 143 (55.4 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 46/165 (27%), Positives = 77/165 (46%)
Query: 47 QAIAGPGHSIAVTSKG-VVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
Q G H++AV++ G +V++FG G+LG G + + P+ + L
Sbjct: 4190 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQ 4249
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGV-QG-TKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
++ ++ G VY FG+ S + G+ +G + PQ V L +F+ A+G T
Sbjct: 4250 FSVALTKDGHVYTFGQVS--DRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLA 4307
Query: 164 LSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 207
LS G VY + ++ +LG HT N V L+ L+ + QI
Sbjct: 4308 LSSTGDVYAWGSNSEGQLGLGHT--NHVREPTLITVLQGKNIRQI 4350
Score = 41 (19.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G V WG G LG G+ P ++ L ++ G
Sbjct: 4312 GDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAG 4353
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 319 GDYTTFVVSEDGDVYSFGC-GESASLGHNAIADGQV--CSLLFLS 360
GD+ T V+ + SFG GE L + ++ C + + S
Sbjct: 2134 GDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSS 2178
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 136 (52.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 40/136 (29%), Positives = 58/136 (42%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G ++ GS S G+ G T ++P+ I + + +
Sbjct: 555 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 614
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 615 ISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGE 663
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 664 VWTFGVNNKGQCGRDT 679
Score = 115 (45.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 977
Query: 336 GCGESASLG 344
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 90 (36.7 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + + C L
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 947
Score = 65 (27.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+Q G H+ + G V++FG N+ GQ G T
Sbjct: 646 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 679
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 136 (52.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 40/136 (29%), Positives = 58/136 (42%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G ++ GS S G+ G T ++P+ I + + +
Sbjct: 555 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 614
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 615 ISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGE 663
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 664 VWTFGVNNKGQCGRDT 679
Score = 115 (45.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 977
Query: 336 GCGESASLG 344
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 90 (36.7 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + + C L
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 947
Score = 65 (27.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+Q G H+ + G V++FG N+ GQ G T
Sbjct: 646 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 679
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 136 (52.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 40/136 (29%), Positives = 58/136 (42%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G ++ GS S G+ G T ++P+ I + + +
Sbjct: 593 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 652
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 653 ISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGE 701
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 702 VWTFGVNNKGQCGRDT 717
Score = 115 (45.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 957 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 1015
Query: 336 GCGESASLG 344
G LG
Sbjct: 1016 GSFSKGQLG 1024
Score = 90 (36.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + + C L
Sbjct: 939 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 985
Score = 65 (27.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+Q G H+ + G V++FG N+ GQ G T
Sbjct: 684 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 717
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 136 (52.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 40/136 (29%), Positives = 58/136 (42%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G ++ GS S G+ G T ++P+ I + + +
Sbjct: 593 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 652
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 653 ISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGE 701
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 702 VWTFGVNNKGQCGRDT 717
Score = 115 (45.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 957 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 1015
Query: 336 GCGESASLG 344
G LG
Sbjct: 1016 GSFSKGQLG 1024
Score = 90 (36.7 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + + C L
Sbjct: 939 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 985
Score = 65 (27.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+Q G H+ + G V++FG N+ GQ G T
Sbjct: 684 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 717
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 49/160 (30%), Positives = 72/160 (45%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
++ C +Q AG HS ++ GVV+ +GSNS+GQLG G T + + P ++SL
Sbjct: 164 QSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKT 223
Query: 98 XXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
T +S G V+ FG FG+ G K P+LV L V Q G
Sbjct: 224 VSISCGGEHTATLSKGGTVFTFGSGGFGQL--GHNSLKDEHHPRLVAELWGSKVSQVTCG 281
Query: 158 NFFTAVLS-REGRVYTFSWGNDARLGHHTEPNDVEPHPLL 196
T V ++Y+F G +LG+ + P P+L
Sbjct: 282 RHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPVL 321
Score = 168 (64.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 51/169 (30%), Positives = 84/169 (49%)
Query: 44 ENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXX 99
EN Q I G HS+A+T+ G ++ +G N+ GQLG + + P+ ++SL
Sbjct: 114 ENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQ 173
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ ++S +G V+ +G +S G+ G + + P +V+SL V + G
Sbjct: 174 ISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFI--PTIVKSLSGKKTVSISCGGE 231
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQI 207
TA LS+ G V+TF G +LGH++ + E HP L+ L V Q+
Sbjct: 232 HTATLSKGGTVFTFGSGGFGQLGHNSLKD--EHHPRLVAELWGSKVSQV 278
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 55/206 (26%), Positives = 87/206 (42%)
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 200
++ L+N V+Q A G+ + L+ +G++ F WG +A +LG E + L +L
Sbjct: 110 LKGLENRQVIQIACGDQHSMALTNDGQL--FVWGENALGQLGLRKEQAGTQSPQHLQSLC 167
Query: 201 NIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQ 260
IPV QI SG+ V+ TD P +++ L +
Sbjct: 168 GIPVAQISAGGNHSFVLSL--SGV-VFGWGSNSAGQLGLGDTTDRFIPTIVKS--LSGKK 222
Query: 261 PXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
+ G V T+G G +G LGH + + E P++V L K V G
Sbjct: 223 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGR 282
Query: 321 YTTFVVSEDGD-VYSFGCGESASLGH 345
+ T V + + +YSFGCG LG+
Sbjct: 283 HHTLVFEDSSNQIYSFGCGMQGQLGN 308
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 51/219 (23%), Positives = 92/219 (42%)
Query: 87 RPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVES 145
RP++ L +M +++ GQ++ +G+++ G+ G++ + T SPQ ++S
Sbjct: 108 RPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQL--GLRKEQAGTQSPQHLQS 165
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLENIP 203
L I V Q + G + VLS G V F WG+++ +LG + P ++ +L
Sbjct: 166 LCGIPVAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTTDRFIP-TIVKSLSGKK 222
Query: 204 VVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXX 263
V I G V++ S DE HPRL+ + +
Sbjct: 223 TVSISCGGEHTATLS---KGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVT 279
Query: 264 XXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVP 302
+ ++ ++G G G LG+G + +SVP
Sbjct: 280 CGRHHTLVFEDSSN-QIYSFGCGMQGQLGNGEQVKQSVP 317
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G V WG G LG G+ +P +V++L+ K + ++ G T +S+ G V++FG
Sbjct: 188 GVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGS 247
Query: 338 GESASLGHNAIAD 350
G LGHN++ D
Sbjct: 248 GGFGQLGHNSLKD 260
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H+ ++ G V++FGS GQLGH + ++E PR + L T++
Sbjct: 229 GGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVF 288
Query: 111 SDAG-QVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
D+ Q+Y+FG G+ G Q + V P L+ + F ++ I
Sbjct: 289 EDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLI 335
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 203 (76.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 81/318 (25%), Positives = 123/318 (38%)
Query: 38 EACCRREN--SQAIAGP-----GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
E CR + S+ A P G + V+ VY +GSNSS QL GT E+ +P+
Sbjct: 341 EEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPK--M 398
Query: 91 SLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
+L T +IS G V A GK S+G G + E ++I
Sbjct: 399 ALSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458
Query: 151 VVQAAIGNF-FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXX 209
V ++ G+ T + EG V+++ G+ +LGH P + G L+ VV +
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSA 518
Query: 210 XXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXX 269
+Y+ P L++ N+
Sbjct: 519 GYRHSAAVTEDGE---LYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NV--GEVSCGSS 571
Query: 270 XXXXXGQDGRVCTWGWG---RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVV 326
+DGR W +G G LGHG+ PKVV+AL + V G ++ +
Sbjct: 572 HTIALSKDGRT-VWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLAL 630
Query: 327 SEDGDVYSFGCGESASLG 344
+ G VY++GCG A LG
Sbjct: 631 TSTGQVYAWGCG--ACLG 646
Score = 193 (73.0 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 72/315 (22%), Positives = 136/315 (43%)
Query: 45 NSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHG-----TTEEEWRPRPIRSLXXXXXX 98
++Q I AG + +++ G V + G S G+LG G +T ++ P RS+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIG 157
T+ + G+V+++G +G+ +G T+ P+L++ L+ VV + G
Sbjct: 464 KGSDGH--TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAG 519
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXX 217
+A ++ +G +YT+ G+ RLGH + N L+ + N+ V
Sbjct: 520 YRHSAAVTEDGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISNVGEVSCGSSHTIALSK 578
Query: 218 XXQPSGMAVYSVXXXXXXXXXXXSRTDEKH-PRLIEQFQLLNLQPXXXXXXXXXXXXXGQ 276
G V+S T+ + P+++E Q + ++
Sbjct: 579 ----DGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS-- 632
Query: 277 DGRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G+V WG G CLG G+ E ++ PK+++ L + + ++ GD ++ D +VY++
Sbjct: 633 TGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAW 690
Query: 336 G------CGESASLG 344
G CG+ S G
Sbjct: 691 GNNSMGQCGQGNSTG 705
Score = 191 (72.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 66/301 (21%), Positives = 123/301 (40%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q I G + + + G V + G S G+LG G +++ I +L
Sbjct: 4032 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 4091
Query: 107 ---TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 4092 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAV 4149
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+ G
Sbjct: 4150 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 4206
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V++ + T + P+ ++ + ++ +DG V T+
Sbjct: 4207 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT--KDGHVYTF 4264
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 4265 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4324
Query: 344 G 344
G
Sbjct: 4325 G 4325
Score = 187 (70.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 65/278 (23%), Positives = 118/278 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXX 104
S + GH++A T++G V+S+G G+LGHG + + P+ I+ L
Sbjct: 461 SSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGY 520
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+ +++ G++Y +G+ FG +G ++ + P LV+ + N V + + G+ T L
Sbjct: 521 RHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISN--VGEVSCGSSHTIAL 576
Query: 165 SREGR-VYTFSWG-NDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPS 222
S++GR V++F G N +LGH + N V ++ L+ + + ++ +
Sbjct: 577 SKDGRTVWSFGGGDNVGKLGHG-DTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS--T 633
Query: 223 GMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCT 282
G VY+ T + P+LIE+ + D V
Sbjct: 634 GQ-VYAWGCGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHVWLFV--MDNEVYA 689
Query: 283 WGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATG 319
WG G G GN + PK V L+ + ++ G
Sbjct: 690 WGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 727
Score = 177 (67.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 60/240 (25%), Positives = 106/240 (44%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
++S+ +VY +G +S + G Q + + P++ S + ++A G + T V+S +G
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQ--EKILQPKMALSFSDAQTIEA--GQYCTFVISTDG 422
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQIXXXXXXXXXXXXQPSGMAVY 227
V G+ RLG N L T E + + ++ + V+
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKL--TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
S + + +K+P+LI Q L +DG + TWG G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLI-QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDG-DVYSFGCGESAS-LGH 345
+G LGHG+ ++P +V+ +++V V+ G T +S+DG V+SFG G++ LGH
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGH 597
Score = 177 (67.4 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L
Sbjct: 4130 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 4189
Query: 98 XXXXXXXXXTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 4190 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 4247
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG 182
G F+ L+++G VYTF G D +G
Sbjct: 4248 GTQFSVALTKDGHVYTF--GQDRLIG 4271
Score = 42 (19.8 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G V WG G LG G+ P +V L ++ G
Sbjct: 4311 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAG 4352
Score = 39 (18.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 319 GDYTTFVVSEDGDVYSFGC-GESASLGHNAIADGQV--CSLLFLS 360
GD+ T V+ + SFG GE L + ++ C + + S
Sbjct: 2135 GDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSS 2179
Score = 37 (18.1 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 10 PMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPG 53
P E E ++ + + + K+ FL A E R+ + +G G
Sbjct: 1367 PEPEDEEEEREHEVMTAGKIFQCFLSAREVARSRDRDRMNSGAG 1410
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 182 (69.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 45/134 (33%), Positives = 66/134 (49%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G HS +T G + +FG GQ G G+T++E P + SL T
Sbjct: 319 GGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCA 378
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREG 168
S G VYAFG + FG+ G + T P+L+E+ L+N+ V + G TAV++ EG
Sbjct: 379 SSDGDVYAFGGNQFGQLGTGCDQAE--TLPKLLEAPNLENVNVKTISCGARHTAVITDEG 436
Query: 169 RVYTFSWGNDARLG 182
RV+ + W +LG
Sbjct: 437 RVFCWGWNKYGQLG 450
Score = 133 (51.9 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 48/221 (21%), Positives = 89/221 (40%)
Query: 109 LISDAGQVYAFGKDSFGEA-EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
L+S + S+G+A GV + +V +++ S +V + A G +AV++
Sbjct: 274 LVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGS----YVKKIACGGRHSAVITDT 329
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVY 227
G + TF WG + G + +++ P + +L I + ++ VY
Sbjct: 330 GALLTFGWGLYGQCGQGSTDDELSP-TCVSSLLGIRIEEVAAGLWHTTCASSDGD---VY 385
Query: 228 SVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGR 287
+ E P+L+E L N+ +GRV WGW +
Sbjct: 386 AFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNK 445
Query: 288 YGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE 328
YG LG G+ + P V+ + D ++A G + T ++ +
Sbjct: 446 YGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHTLLLGQ 485
Score = 129 (50.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + T+GWG YG G G+ + E P V +L ++ VA G + T S DGDVY+FG
Sbjct: 330 GALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGG 389
Query: 338 GESASLG 344
+ LG
Sbjct: 390 NQFGQLG 396
Score = 115 (45.5 bits), Expect = 0.00083, P = 0.00083
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS--LXXXXXXXXXXXX 104
+ AG H+ +S G VY+FG N GQLG G + E P+ + + L
Sbjct: 367 EVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGA 426
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +I+D G+V+ +G + +G+ G+ +P V +K+ F A G + T +L
Sbjct: 427 RHTAVITDEGRVFCWGWNKYGQL--GIGDVIDRNAPAEVR-IKDCFPKNIACGWWHTLLL 483
Query: 165 SR 166
+
Sbjct: 484 GQ 485
Score = 69 (29.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE-PHPL 195
P LV + +V A G T LS G+V+ + +G + +LG + V PHP+
Sbjct: 225 PCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPI 281
Score = 60 (26.2 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
AG H++A++ G V+ +G GQLG G+
Sbjct: 241 AGGRHTLALSDIGQVWGWGYGGEGQLGLGS 270
Score = 58 (25.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK 147
T+ +SD GQV+ +G G+ G + +LV+SP + ++
Sbjct: 246 TLALSDIGQVWGWGYGGEGQLGLGSR-VRLVSSPHPIPCIE 285
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 129 (50.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 43/134 (32%), Positives = 62/134 (46%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
H T G+V + G GQLG G E R +P T+ +S +
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVME-RKKPALVSIPEDVVQAEAGGMHTVCLSKS 93
Query: 114 GQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 94 GQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTDDGRV- 148
Query: 172 TFSWGNDARLGHHT 185
F WG+ HT
Sbjct: 149 -FLWGSFRHCLFHT 161
Score = 93 (37.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 23/74 (31%), Positives = 34/74 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 79 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 138
Query: 107 TMLISDAGQVYAFG 120
T ++D G+V+ +G
Sbjct: 139 TAALTDDGRVFLWG 152
Score = 89 (36.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VQ DV + VA+G+ +++ DGD+Y+ GCGE LG
Sbjct: 202 VQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 87 (35.7 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
++ G V G+ G+ G + P LV ++ VVQA G T LS+ G+V
Sbjct: 40 TEPGLVLTLGQGDVGQLGLG-ENVMERKKPALVSIPED--VVQAEAGGMHTVCLSKSGQV 96
Query: 171 YTFSWGNDARLGHHTEPNDVEPHPLLGTLE-NIPVVQI 207
Y+F ++ LG T E P G +E VVQ+
Sbjct: 97 YSFGCNDEGALGRDTSVEGSEMVP--GKVELQEKVVQV 132
Score = 58 (25.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE 186
VV+ A GN +L+ +G +YT G +LG E
Sbjct: 210 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE 245
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 277 DGRVCTWGWGRYGCLGHGNE 296
DGRV WG R+ CL H ++
Sbjct: 145 DGRVFLWGSFRH-CLFHTSQ 163
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXX 104
++ G HS+A+T +G V+++G N+ GQ+G G+T + PR + + L
Sbjct: 131 TEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQ 190
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
+M ++D G+VY +G + G+ G G +L T +L+ +L+ V+Q A G + L
Sbjct: 191 TSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRLI-ALQGFCVLQIASGYAHSLAL 248
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGM 224
+ EG +Y + +LG + N + P ++ E I V+I SG
Sbjct: 249 TDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERI--VEIAACHSTHTSAAKTQSGQ 306
Query: 225 AVY 227
VY
Sbjct: 307 -VY 308
Score = 148 (57.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 43/160 (26%), Positives = 78/160 (48%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXXXTM 108
+GP H + VT G +Y++G N QLG+GTT + P + + L ++
Sbjct: 83 SGP-HVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSL 141
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSRE 167
++ G+V+A+G ++ G+ G T +P+ V + L+N +V A G + ++
Sbjct: 142 ALTHEGEVFAWGYNNCGQVGSG--STANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDN 199
Query: 168 GRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G VY + + + +LG N + P L+ L+ V+QI
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPCRLIA-LQGFCVLQI 238
Score = 136 (52.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G S+AVT G VY +G N +GQLG G + P + +L ++ +
Sbjct: 189 GQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLAL 248
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+D G +YA+G +++G+ G + +L SP Q++ + I + A +A ++ G+
Sbjct: 249 TDEGLLYAWGANTYGQLGTGNKSNQL--SPVQVMTEKERIVEIAACHSTHTSAAKTQSGQ 306
Query: 170 VYTFSWG 176
VY WG
Sbjct: 307 VYM--WG 311
Score = 78 (32.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVAT--GDYTTFVVSEDGDVY 333
+G + WG YG LG GN+ + P VQ + + + I +A +T+ ++ G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSP--VQVMTEKERIVEIAACHSTHTSAAKTQSGQVY 308
Query: 334 SFG-C-GESASLGH 345
+G C G++ L H
Sbjct: 309 MWGQCRGQAIVLPH 322
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 138 (53.6 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 41/136 (30%), Positives = 58/136 (42%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G V+ GS S G+ G T ++P+ I + + +
Sbjct: 555 HALLVAEDGSVFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 614
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 615 ISKDGELYMFGKDAI----YS-------DSSSLVSDLKGHFVTQVAMGKAHTCVLMKNGE 663
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 664 VWTFGVNNKGQCGRDT 679
Score = 110 (43.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL A ++T V+ DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACSNHTA-VLLMDGQVFTF 977
Query: 336 GCGESASLG 344
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 90 (36.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + + C L
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 947
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 135 (52.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 43/142 (30%), Positives = 65/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 71 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++D G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTDDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 188 TADGDLYTLGCGEQGQLGRVPE 209
Score = 132 (51.5 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 50/160 (31%), Positives = 75/160 (46%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
H T G+V + G GQLG G E R +P T+ +S +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVME-RKKPALVSIPEDVVQAEAGGMHTVCLSKS 85
Query: 114 GQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTDDGRV- 140
Query: 172 TFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
F WG N+ +G EP P+ L+ +PVV++
Sbjct: 141 -FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-VPVVKV 177
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX--XXXXXXX 105
A G + A++ +G VY FG ++ QLG TE + P+ + S
Sbjct: 245 AFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQH 304
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ + G+ Y+ G+ +G G +G + + P L+ L + V A G ++
Sbjct: 305 HTVCMDSEGKAYSLGRAEYGRLGLG-EGAEEKSIPTLISRLPAVSSV--ACGASVGYAVT 361
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQI 207
++GRV+ + G + +LG + + P ++G LEN V+ +
Sbjct: 362 KDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSV 404
Score = 89 (36.4 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+GR G LG G EE +S+P ++ L V + VA G + V++DG V+++G G + LG
Sbjct: 323 YGRLG-LGEGAEE-KSIPTLISRLPAVSS--VACGASVGYAVTKDGRVFAWGMGTNYQLG 378
Score = 69 (29.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 28/84 (33%), Positives = 33/84 (39%)
Query: 277 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 320
DG + T G G G LG G + E VPK V + HV G
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 321 YTTFVVSEDGDVYSFGCGESASLG 344
Y TF +S +G VY FG LG
Sbjct: 250 YFTFAISHEGHVYGFGLSNYHQLG 273
Score = 68 (29.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 277 DGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGDYTTFVVSEDGDVYS 334
+G V +G Y LG G E C + N K+ + + G + T + +G YS
Sbjct: 258 EGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS 317
Query: 335 FGCGESASLG 344
G E LG
Sbjct: 318 LGRAEYGRLG 327
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 171 (65.3 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 48/182 (26%), Positives = 84/182 (46%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
+ G HS+A++ G +Y++G N+ GQ+G G+T + PR + + L
Sbjct: 132 EVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQT 191
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + + G+VY +G + G+ G G +L +P V +L + ++Q A G T L+
Sbjct: 192 SSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--TPCRVAALHGVCILQIACGYAHTLALT 249
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 225
EG +Y + +LG + N + P ++ +E VV+I SG
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKSNQLSPLQIM--MEKERVVEIAACHSAHTSAAKTQSGQ- 306
Query: 226 VY 227
VY
Sbjct: 307 VY 308
Score = 144 (55.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 46/173 (26%), Positives = 78/173 (45%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLXXX 95
EA C ++ S G G H + T G VY++G N QLG+G T + P + +L
Sbjct: 69 EALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLK 128
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQA 154
+M +S G +YA+G ++ G+ G T +P+ V + L++ VV
Sbjct: 129 KVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSG--STANQPTPRRVSNCLQDKMVVGI 186
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
A G + + G VY + + + +LG N + P + L + ++QI
Sbjct: 187 ACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRV-AALHGVCILQI 238
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 38/139 (27%), Positives = 67/139 (48%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
C + + IA G S+AV + G VY +G N +GQLG G + P + +L
Sbjct: 177 CLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCIL 236
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIG 157
T+ ++D G +YA+G +++G+ G + +L SP Q++ + + + A
Sbjct: 237 QIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPLQIMMEKERVVEIAACHS 294
Query: 158 NFFTAVLSREGRVYTFSWG 176
+A ++ G+VY WG
Sbjct: 295 AHTSAAKTQSGQVYM--WG 311
Score = 82 (33.9 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+G + WG YG LG GN+ + P +++ V I +T+ ++ G VY +
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMW 310
Query: 336 G-C-GESASLGH 345
G C G+S L H
Sbjct: 311 GQCRGQSVVLPH 322
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 136 (52.9 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 40/136 (29%), Positives = 58/136 (42%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G ++ GS S G+ G T ++P+ I + + +
Sbjct: 555 HALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSV 614
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 615 ISKDGELYMFGKDAI----YS-------DSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGE 663
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 664 VWTFGVNNKGQCGRDT 679
Score = 111 (44.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T + DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAALLMDGQVFTF 977
Query: 336 GCGESASLG 344
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 90 (36.7 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+++A+ V+ G + + V+ E+GDVY+FG G+ LGH + + + C L
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 947
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 132 (51.5 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 40/136 (29%), Positives = 57/136 (41%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G V+ GS S G+ G ++P+ I + + +
Sbjct: 555 HALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSV 614
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
IS G++Y FGKD+ Y S LV LK FV Q A+G T VL + G
Sbjct: 615 ISKDGELYMFGKDAI----YS-------DSSSLVSDLKGHFVTQVAMGKAHTCVLMKNGE 663
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 664 VWTFGVNNKGQCGRDT 679
Score = 115 (45.5 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 919 ENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPG-PSTQVTAGSNHTAVLVMDGQVFTF 977
Query: 336 GCGESASLG 344
G LG
Sbjct: 978 GSFSKGQLG 986
Score = 93 (37.8 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+V+A+ V+ G + + V+ E+GDVY+FG G+ LGH + + + C L
Sbjct: 901 EVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV-NSRGCPTL 947
Score = 65 (27.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+Q G H+ + G V++FG N+ GQ G T
Sbjct: 646 TQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 679
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 133 (51.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 42/163 (25%), Positives = 74/163 (45%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX--XXXXXXX 105
A G + A++S+G VY FG ++ QLG TE + P+ + S
Sbjct: 245 AFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQH 304
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ + G+ Y+ G+ +G G +G + + P L+ L + V A G ++
Sbjct: 305 HTVCMDSEGRAYSLGRAEYGRLGLG-EGAEEKSVPTLISRLPAVSSV--ACGASVGYAVT 361
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQI 207
++GRV+ + G + +LG E + P + G LEN V+ +
Sbjct: 362 KDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSV 404
Score = 130 (50.8 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 42/142 (29%), Positives = 65/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 71 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +++ G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 188 TADGELYTLGSGEQGQLGRVPE 209
Score = 130 (50.8 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 50/160 (31%), Positives = 75/160 (46%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
H T G+V + G GQLG G E R +P T+ +S +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVME-RKKPALVPIPEDIVQAEAGGMHTVCLSKS 85
Query: 114 GQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTEDGRV- 140
Query: 172 TFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
F WG N+ +G EP P+ L ++PVV++
Sbjct: 141 -FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQL-SMPVVKV 177
Score = 93 (37.8 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 277 DGRVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+GR + G YG LG G E +SVP ++ L V + VA G + V++DG V+++
Sbjct: 312 EGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSS--VACGASVGYAVTKDGRVFAW 369
Query: 336 GCGESASLG 344
G G + LG
Sbjct: 370 GMGTNYQLG 378
Score = 70 (29.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 277 DGRVCTWGWGRYGCLGH-GNEECESVPKVVQAL-NDVKA-IHVATGDYTTFVVSEDGDVY 333
+G V +G Y LG G E C VP+ + + N K+ + + G + T + +G Y
Sbjct: 258 EGHVYGFGLSNYHQLGTPGTESC-FVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAY 316
Query: 334 SFGCGESASLG 344
S G E LG
Sbjct: 317 SLGRAEYGRLG 327
Score = 70 (29.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/84 (33%), Positives = 33/84 (39%)
Query: 277 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 320
DG + T G G G LG G + E VPK V + HV G
Sbjct: 190 DGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 321 YTTFVVSEDGDVYSFGCGESASLG 344
Y TF +S +G VY FG LG
Sbjct: 250 YFTFAISSEGHVYGFGLSNYHQLG 273
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 187 (70.9 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 50/150 (33%), Positives = 73/150 (48%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG HS+A++ G VYS+G N GQLG G T + P I +L
Sbjct: 205 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 264
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T L++ +G V+ FG +G+ G T+ P+LV L V Q A G T A +S
Sbjct: 265 TALLTKSGLVFTFGDGKYGQL--GHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVS 322
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
G+V++F G + +LG+ N + P P+
Sbjct: 323 DTGKVFSFGSGKEGQLGNGGTRNQLIPRPM 352
Score = 187 (70.9 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 51/171 (29%), Positives = 84/171 (49%)
Query: 40 CCRRENS--QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIRSLXXXX 96
C +E + Q G HS+A++ G ++++G N GQLG G P + +L
Sbjct: 143 CILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVP 202
Query: 97 XXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
+M +S +G VY++G++ G+ G K SP +E+L + V A
Sbjct: 203 LVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNK--ESPSCIEALDDQKVEFLAC 260
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G TA+L++ G V+TF G +LGH++ N++ P + G + N V QI
Sbjct: 261 GGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGN-RVTQI 310
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 61/240 (25%), Positives = 99/240 (41%)
Query: 112 DAGQVYAFGKDSFG---EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
D G+ + S G E +Y ++ + Q + KNI +Q G++ + LS+ G
Sbjct: 114 DQGEEHMLVLSSDGKPFEYKYSIEHARF----QCILQEKNI--IQITCGDYHSLALSKGG 167
Query: 169 RVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAV 226
+ F+WG D +LG ++ L +P+VQI SG V
Sbjct: 168 EL--FAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSM--SGN-V 222
Query: 227 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 286
YS +++ P IE ++ + G V T+G G
Sbjct: 223 YSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVE--FLACGGCHTALLTKSGLVFTFGDG 280
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVSEDGDVYSFGCGESASLGH 345
+YG LGH + + E P++V L + +A G +T VS+ G V+SFG G+ LG+
Sbjct: 281 KYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGN 340
Score = 136 (52.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML- 109
G H+ +T G+V++FG GQLGH +T+ E RPR + L T+
Sbjct: 261 GGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAY 320
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVES 145
+SD G+V++FG G+ G +L+ P +L+ S
Sbjct: 321 VSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSS 357
Score = 38 (18.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGD 331
+L D+K + G+ ++ +DGD
Sbjct: 737 SLEDLKELSPVLGESLQTLLDDDGD 761
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 131 (51.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 48/155 (30%), Positives = 74/155 (47%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYA 118
T GVV + G GQLG G E R +P T+ +S +GQVY+
Sbjct: 32 TEPGVVLTLGQGDVGQLGLGENVME-RKKPALVSIPEDIVQAEAGGMHTVCLSKSGQVYS 90
Query: 119 FGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
FG + G + V+G+++V P V+ + V+Q + G+ TA L+ +GRV F WG
Sbjct: 91 FGCNDEGALGRDTSVEGSEMV--PGKVDLQEK--VIQVSAGDSHTAALTEDGRV--FLWG 144
Query: 177 ----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
N+ +G EP P+ L ++PVV++
Sbjct: 145 SFRDNNGVIGL-LEPMKKSMVPVQVQL-SVPVVKV 177
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX--XXXXXXX 105
A G + A++S+G VY FG ++ QLG TE + P+ + S
Sbjct: 245 AFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFSGGQH 304
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ + G+ Y+ G+ +G G +G + + P L+ L + V A G ++
Sbjct: 305 HTVCMDSEGKAYSLGRAEYGRLGLG-EGAEEKSVPTLIPRLPTVSSV--ACGASVGYAVT 361
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGT-LENIPVVQI 207
++GRV+ + G + +LG + + P + G LEN V+ +
Sbjct: 362 KDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTV 404
Score = 127 (49.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 42/142 (29%), Positives = 65/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 71 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQEKVIQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +++ G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 188 TVDGDLYTLGSGEQGQLGRVPE 209
Score = 90 (36.7 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+GR G LG G EE +SVP ++ L V + VA G + V++DG V+++G G + LG
Sbjct: 323 YGRLG-LGEGAEE-KSVPTLIPRLPTVSS--VACGASVGYAVTKDGRVFAWGMGTNYQLG 378
Score = 71 (30.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 277 DGRVCTWGWGRYGCLG-HGNEECESVPKVVQAL-NDVKA-IHVATGDYTTFVVSEDGDVY 333
+G V +G Y LG G E C VP+ + + N K+ + + G + T + +G Y
Sbjct: 258 EGHVYGFGLSNYHQLGTQGTESC-FVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAY 316
Query: 334 SFGCGESASLG 344
S G E LG
Sbjct: 317 SLGRAEYGRLG 327
Score = 69 (29.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 34/116 (29%), Positives = 42/116 (36%)
Query: 277 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 320
DG + T G G G LG G + E VPK V + HV G
Sbjct: 190 DGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWLNLSSYRH 376
Y TF +S +G VY FG LG V L S + W+ S +H
Sbjct: 250 YFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNL-TSFKNSTKSWVGFSGGQH 304
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 130 (50.8 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
H T G+V + G GQLG G + E R +P T+ ++ +
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLE-RKKPALVPLLQDVVQAEAGGMHTVCLNQS 85
Query: 114 GQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTEDGRV- 140
Query: 172 TFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
F WG N+ +G EP P+ L+ +PVV++
Sbjct: 141 -FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-MPVVKV 177
Score = 128 (50.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 42/142 (29%), Positives = 64/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ + G VYSFG N G LG T+ E P +
Sbjct: 71 QAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +++ G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 188 TTDGDLYTLGCGEQGQLGRVPE 209
Score = 91 (37.1 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+GR G LG G EE +S+P ++ L V + VA G + VS+DG V+++G G + LG
Sbjct: 323 YGRLG-LGEGAEE-KSIPTLISRLPVVSS--VACGASVGYAVSKDGRVFAWGMGTNYQLG 378
Score = 67 (28.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 33/116 (28%), Positives = 43/116 (37%)
Query: 277 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQ-----ALNDVKAIHVATGD 320
DG + T G G G LG G + E VPK V + V+ G
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGA 249
Query: 321 YTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWLNLSSYRH 376
Y TF +S +G VY FG LG A + L S + W+ S +H
Sbjct: 250 YLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNL-TSFKNSTKSWVGFSGGQH 304
Score = 64 (27.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 276 QDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGDYTTFVVSEDGDVY 333
++G V +G Y LG G C + N K+ + + G + T + +G Y
Sbjct: 257 REGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAY 316
Query: 334 SFGCGESASLG 344
S G E LG
Sbjct: 317 SLGRAEYGRLG 327
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 130 (50.8 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 49/155 (31%), Positives = 74/155 (47%)
Query: 59 TSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYA 118
T G+V + G GQLG G + E R +P T+ +S +GQVY+
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLE-RKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYS 90
Query: 119 FGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 176
FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV F WG
Sbjct: 91 FGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTEDGRV--FLWG 144
Query: 177 ----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
N+ +G EP P+ L+ PVV++
Sbjct: 145 SFRDNNGVIGL-LEPMKKSMVPVQVQLD-APVVKV 177
Score = 128 (50.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 42/142 (29%), Positives = 64/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 71 QAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T +++ G+V+ +G SF + GV G + S V+ + VV+ A GN +L
Sbjct: 131 TAALTEDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 188 TNDGDLYTLGCGEQGQLGRVPE 209
Score = 91 (37.1 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+GR G LG G EE +S+P ++ L V + VA G + VS+DG V+++G G + LG
Sbjct: 323 YGRLG-LGEGAEE-KSIPTLISRLPVVSS--VACGASVGYAVSKDGRVFAWGMGTNYQLG 378
Score = 62 (26.9 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 319 GDYTTFVVSEDGDVYSFGCGESASLG 344
G Y TF +S +G VY FG LG
Sbjct: 248 GAYFTFAISREGHVYGFGLSNYHQLG 273
Score = 62 (26.9 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 19/71 (26%), Positives = 29/71 (40%)
Query: 276 QDGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGDYTTFVVSEDGDVY 333
++G V +G Y LG G C + N K+ + + G + T + +G Y
Sbjct: 257 REGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAY 316
Query: 334 SFGCGESASLG 344
S G E LG
Sbjct: 317 SLGRAEYGRLG 327
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 130 (50.8 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 35/130 (26%), Positives = 65/130 (50%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G HS VT +Y FGSN+ GQLG G+ +P +++L T++
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVS 102
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVV-QAAIGNFFTAVLSREGR 169
++ G VYA G ++ E + G+ T+ + ++ + + Q + G+ +A L+ +GR
Sbjct: 103 TEGGNVYATGGNN--EGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGR 160
Query: 170 VYTFSWGNDA 179
+ F WG+++
Sbjct: 161 L--FMWGDNS 168
Score = 124 (48.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 48 AIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXT 107
A G H++ T G VY+ G N+ GQLG G TEE I T
Sbjct: 92 AACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNT 151
Query: 108 ML-ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+++ G+++ +G +S E + G++ V PQ V K + + G + +A ++
Sbjct: 152 SAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVTIGKPVSWISC--GYYHSAFVTT 207
Query: 167 EGRVYTFSWGNDARLG 182
+G +Y F + +LG
Sbjct: 208 DGELYVFGEPENGKLG 223
Score = 123 (48.4 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 40/136 (29%), Positives = 60/136 (44%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG S A+T G ++ +G NS GQ+G P+ + ++
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSWISCGYYHS 202
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ +D G++Y FG+ G+ Q +PQLV + V+Q A G T VL+
Sbjct: 203 AFVTTD-GELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLT- 259
Query: 167 EGRVYTFSWGNDARLG 182
E VYTF G +LG
Sbjct: 260 ENAVYTFGLGQFGQLG 275
Score = 101 (40.6 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ V T+G G++G LG G E S PKV++ + D +++ G+ T ++++ G +Y+F
Sbjct: 260 ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTF 319
Query: 336 GCGESASLG 344
G G LG
Sbjct: 320 GDGRHGKLG 328
Score = 86 (35.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++ ++Y FG +++G+ G+ ++ P V++LK V AA G T V + G
Sbjct: 49 VVTGNNKLYMFGSNNWGQL--GLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGG 106
Query: 169 RVYTFSWGNDARLG 182
VY N+ +LG
Sbjct: 107 NVYATGGNNEGQLG 120
Score = 84 (34.6 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+DGR+ WG G +G N VP+ V V I + G Y + V+ DG++Y F
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVTTDGELYVF 214
Query: 336 GCGESASLG 344
G E+ LG
Sbjct: 215 GEPENGKLG 223
Score = 79 (32.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
DG + +G G LG N+ + P++V + + K I VA G T V++E+ VY+
Sbjct: 208 DGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTENA-VYT 265
Query: 335 FGCGESASLG 344
FG G+ LG
Sbjct: 266 FGLGQFGQLG 275
Score = 42 (19.8 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 278 GRVCTWGWGRYGCLGHGNE 296
G + T+G GR+G LG G E
Sbjct: 314 GLMYTFGDGRHGKLGLGLE 332
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 157 (60.3 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 48/152 (31%), Positives = 70/152 (46%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + L
Sbjct: 383 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVS 442
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
T+ I+D GQ+YAFG D +G G++++ QL L N V Q + G+
Sbjct: 443 CGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNP-VEQVSCGDNH 501
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
AVL+R VYT+ G RLG +E + P
Sbjct: 502 VAVLTRNREVYTWGCGEYGRLGLDSEEDHYTP 533
Score = 71 (30.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR+ T+G + G LG G+ + + + L + I V+ GD T ++D ++++G
Sbjct: 626 GRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 685
Query: 337 CGESASL 343
G + L
Sbjct: 686 NGGNGRL 692
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 158 (60.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
G H++ +T G ++S GSN GQLG G+ TE + P+ T+
Sbjct: 49 GEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVS 108
Query: 110 ISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++D G+V+A+G + G E+++ QGT P+ V+ + +I VQ A G+ L
Sbjct: 109 VTDDGRVFAWGSNEHGQLGMESKFTWQGT-----PRRVQEINDI--VQVASGSNHCIALD 161
Query: 166 REGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
GRV F WG D R H EP VE L +P+V++
Sbjct: 162 EGGRV--FVWGEQADGRCIHRPEP--VEQ------LSGVPIVRV 195
Score = 148 (57.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 34/137 (24%), Positives = 66/137 (48%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
+ +AG H +A+++ G V+++G N+SG+LG + + + +
Sbjct: 194 RVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+L++ G+ ++FG D+ G+ +G + K T+P V L V + A G T + +
Sbjct: 254 TVLLTHCGRTFSFGSDALGQCGFGKKVEKR-TNPTAVSDLIGSHVTRIAAGACHTIAICK 312
Query: 167 EGRVYTFSWGNDARLGH 183
G Y F + +LG+
Sbjct: 313 -GAPYPFGLNSSGQLGN 328
Score = 134 (52.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG H+++VT G V+++GSN GQLG ++ W+ P R
Sbjct: 98 QISAGRSHTVSVTDDGRVFAWGSNEHGQLGM-ESKFTWQGTPRRVQEINDIVQVASGSNH 156
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ + + G+V+ +G+ + G + + P+ VE L + +V+ G LS
Sbjct: 157 CIALDEGGRVFVWGEQADG---------RCIHRPEPVEQLSGVPIVRVLAGARHCLALSA 207
Query: 167 EGRVYTFSWGNDARLG 182
G V+T+ N LG
Sbjct: 208 SGAVFTWGQNNSGELG 223
Score = 70 (29.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V TWG G LG + ++ + V ++ + + A GD T +++ G +SFG
Sbjct: 209 GAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFG 267
Score = 63 (27.2 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 21/72 (29%), Positives = 29/72 (40%)
Query: 278 GRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR ++G G G G + E + P V L +A G T + + G Y FG
Sbjct: 261 GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFG 319
Query: 337 CGESASLGHNAI 348
S LG+ I
Sbjct: 320 LNSSGQLGNGKI 331
Score = 51 (23.0 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+G G LG+G +S P+ L+ V + G + TF V G +
Sbjct: 318 FGLNSSGQLGNGKIMTQSTPRKTDELDHVTGVFA--GYHQTFFVRSSGTI 365
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 158 (60.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
G H++ +T G ++S GSN GQLG G+ TE + P+ T+
Sbjct: 49 GEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVS 108
Query: 110 ISDAGQVYAFGKDSFG----EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
++D G+V+A+G + G E+++ QGT P+ V+ + +I VQ A G+ L
Sbjct: 109 VTDDGRVFAWGSNEHGQLGMESKFTWQGT-----PRRVQEINDI--VQVASGSNHCIALD 161
Query: 166 REGRVYTFSWGN--DARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
GRV F WG D R H EP VE L +P+V++
Sbjct: 162 EGGRV--FVWGEQADGRCIHRPEP--VEQ------LSGVPIVRV 195
Score = 148 (57.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 34/137 (24%), Positives = 66/137 (48%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
+ +AG H +A+++ G V+++G N+SG+LG + + + +
Sbjct: 194 RVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+L++ G+ ++FG D+ G+ +G + K T+P V L V + A G T + +
Sbjct: 254 TVLLTHCGRTFSFGSDALGQCGFGKKVEKR-TNPTAVSDLIGSHVTRIAAGACHTIAICK 312
Query: 167 EGRVYTFSWGNDARLGH 183
G Y F + +LG+
Sbjct: 313 -GAPYPFGLNSSGQLGN 328
Score = 134 (52.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG H+++VT G V+++GSN GQLG ++ W+ P R
Sbjct: 98 QISAGRSHTVSVTDDGRVFAWGSNEHGQLGM-ESKFTWQGTPRRVQEINDIVQVASGSNH 156
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+ + + G+V+ +G+ + G + + P+ VE L + +V+ G LS
Sbjct: 157 CIALDEGGRVFVWGEQADG---------RCIHRPEPVEQLSGVPIVRVLAGARHCLALSA 207
Query: 167 EGRVYTFSWGNDARLG 182
G V+T+ N LG
Sbjct: 208 SGAVFTWGQNNSGELG 223
Score = 70 (29.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
G V TWG G LG + ++ + V ++ + + A GD T +++ G +SFG
Sbjct: 209 GAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFG 267
Score = 63 (27.2 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 21/72 (29%), Positives = 29/72 (40%)
Query: 278 GRVCTWGWGRYGCLGHGNE-ECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR ++G G G G + E + P V L +A G T + + G Y FG
Sbjct: 261 GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFG 319
Query: 337 CGESASLGHNAI 348
S LG+ I
Sbjct: 320 LNSSGQLGNGKI 331
Score = 51 (23.0 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 283 WGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
+G G LG+G +S P+ L+ V + G + TF V G +
Sbjct: 318 FGLNSSGQLGNGKIMTQSTPRKTDELDHVTGVFA--GYHQTFFVRSSGTI 365
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 134 (52.2 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 38/140 (27%), Positives = 63/140 (45%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP-IRSLXXXXXXXXXXXXXXTM 108
AG H++ +T G +YSFG N G LG T+E+ +P + L
Sbjct: 81 AGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSAC 140
Query: 109 LISDAGQVYAFG--KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
L+ D G+V+A+G +DS G + G K +P ++ ++ A G +L+
Sbjct: 141 LLED-GRVFAWGSFRDSHGNMGLTIDGNK--RTP--IDLMEGTVCCSIASGADHLVILTT 195
Query: 167 EGRVYTFSWGNDARLGHHTE 186
G+V+T +LG +E
Sbjct: 196 AGKVFTVGCAEQGQLGRLSE 215
Score = 89 (36.4 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 284 GWGRYGCLGHGN-EECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G YG LG G+ ++ P +V+ L + K + V G+ ++ V+ DG +YS+G G +
Sbjct: 318 GRPEYGRLGLGDVKDVVEKPTIVKKLTE-KIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQ 376
Query: 343 LGHNAIADG 351
LG + DG
Sbjct: 377 LG---VGDG 382
Score = 60 (26.2 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV-KAIHVATG--DYTTFVVSED 329
DG++ +WG G LG G+ + E P VV + N K + +A+G + F+V D
Sbjct: 363 DGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKAD 418
Score = 45 (20.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 16/68 (23%), Positives = 29/68 (42%)
Query: 284 GWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESAS 342
G + L H + E ++ + L D++ H+A G + T +++ D G E
Sbjct: 267 GLNNFKQLAHETKGKEFALTPIKTELKDIR--HIAGGQHHTVILTTDLKCSVVGRPEYGR 324
Query: 343 LGHNAIAD 350
LG + D
Sbjct: 325 LGLGDVKD 332
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 152 (58.6 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+V +WG GR+G LGHG+ E E P++++AL ++ VA G + + VSE GD+Y +G
Sbjct: 180 GQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGW 239
Query: 338 GESASL 343
ES L
Sbjct: 240 NESGQL 245
Score = 114 (45.2 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ + G V+S+G GQLGHG+ E E PR + +L ++ +
Sbjct: 169 GAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCV 228
Query: 111 SDAGQVYAFGKDSFGE 126
S+ G +Y +G + G+
Sbjct: 229 SETGDIYIWGWNESGQ 244
Score = 104 (41.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 20/74 (27%), Positives = 42/74 (56%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+L+ +AGQV+++G G+ +G +L P+L+E+L+ + + + A G + + +S
Sbjct: 174 LLLCEAGQVFSWGGGRHGQLGHGSLEAEL--EPRLLEALQGLRMAEVAAGGWHSVCVSET 231
Query: 168 GRVYTFSWGNDARL 181
G +Y + W +L
Sbjct: 232 GDIYIWGWNESGQL 245
Score = 89 (36.4 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
P L++ V+A+ G+ TAV++R G +YT+ WG +LGH + +P
Sbjct: 293 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQP 345
Score = 83 (34.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVP-KV---VQALNDVKAIHVATGDYTTFV 325
G + TWGWG+YG LGH + P +V V+ +V+A V G + T+V
Sbjct: 321 GELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRA--VTCGPWNTYV 370
Score = 68 (29.0 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH-NAIADGQVC 354
A+ + G T VV+ G++Y++G G+ LGH ++ + Q C
Sbjct: 304 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPC 346
Score = 67 (28.6 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL 75
++ AG HS+ V+ G +Y +G N SGQL
Sbjct: 216 AEVAAGGWHSVCVSETGDIYIWGWNESGQL 245
Score = 63 (27.2 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
G + FG FG+A G V SP+ + + ++ V A+ +TA+++R GRV
Sbjct: 7 GAWFGFGFCGFGQALGSGNGQHAVHSPEPLHAADDVCQVSASWS--YTALVTRGGRV 61
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 129 (50.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 38/136 (27%), Positives = 58/136 (42%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXXXXXXXXXTML 109
H++ V G V+ GS S G+ G T ++P+ + L + +
Sbjct: 584 HALLVAEDGSVFFTGSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGSSSI 643
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ G++Y FGKD+ Y S V LK FV Q A+G T VL++ G
Sbjct: 644 VTKDGELYMFGKDAI----YS-------DSTCQVSDLKGHFVTQVAMGKAHTCVLTKSGE 692
Query: 170 VYTFSWGNDARLGHHT 185
V+TF N + G T
Sbjct: 693 VWTFGVNNKGQCGRDT 708
Score = 114 (45.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
++G V T+G+G++G LGHG+ P +VQAL + V G T V+ DG V++F
Sbjct: 942 ENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPG-PSTQVTAGSNHTAVLLMDGQVFTF 1000
Query: 336 GCGESASLG 344
G LG
Sbjct: 1001 GSFSKGQLG 1009
Score = 90 (36.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAI 348
P V+ +++A+ V+ G + + V+ E+GDVY+FG G+ LGH +
Sbjct: 916 PGAVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDV 962
Score = 71 (30.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGT 79
+Q G H+ +T G V++FG N+ GQ G T
Sbjct: 675 TQVAMGKAHTCVLTKSGEVWTFGVNNKGQCGRDT 708
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 139 (54.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 49/155 (31%), Positives = 65/155 (41%)
Query: 40 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXX 99
C R + G GHS VT G ++ G N GQLG G TE+ P +SL
Sbjct: 46 CKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQ 105
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGN 158
T+++++ GQV + G +SFG+ GV G + PQ +E K V AA G
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFGQL--GVPHGPRRCVVPQAIELHKEKVVCIAA-GL 162
Query: 159 FFTAVLSREGRVYTFSWGND-ARLGHHTEPNDVEP 192
+ G V F WG A G P P
Sbjct: 163 RHAVAATASGIV--FQWGTGLASCGRRLCPGQTLP 195
Score = 93 (37.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 44 ENSQA---IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLXXXXXX 98
ENS+A +AG HS ++T G VY +GSN GQL + E + P P I +
Sbjct: 210 ENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN---EAAFLPVPQKIEAHCFQNEK 266
Query: 99 XXXXXXXXTMLIS--DAGQVYAFGKDSFGEAEYGVQGTKLVT 138
T L++ + G+++ +G+ A+YG G KL T
Sbjct: 267 VTAIWSGWTHLVAQTETGKMFTWGR-----ADYGQLGRKLET 303
Score = 92 (37.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/132 (23%), Positives = 59/132 (44%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX-XXXXXXXXXXXXTMLI 110
P S A + ++++G+NS GQLG G E+ P+ + + ++
Sbjct: 5 PSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVV 64
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D G ++ G + G+ G+ T+ + +SL + Q A G FT +L+ G+V
Sbjct: 65 TDGGDLFVCGLNKDGQL--GLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQV 122
Query: 171 YTFSWGNDARLG 182
+ + +LG
Sbjct: 123 LSCGSNSFGQLG 134
Score = 83 (34.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 276 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
++G+V + G +G LG HG C VP+ ++ L+ K + +A G + G V+
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVF 175
Query: 334 SFGCGESASLGHNAIADGQVCSLLF 358
+G G AS G + GQ L F
Sbjct: 176 QWGTG-LASCGRR-LCPGQTLPLFF 198
Score = 80 (33.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 278 GRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G VC +WGW +G G G E PK VQAL + V G
Sbjct: 350 GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG 392
Score = 55 (24.4 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQA--LNDVKAIHVATGDYTTFVV-SEDGDVY 333
G V WG ++G L NE VP+ ++A + K + +G +T V +E G ++
Sbjct: 231 GEVYVWGSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSG-WTHLVAQTETGKMF 287
Query: 334 SFGCGESASLG 344
++G + LG
Sbjct: 288 TWGRADYGQLG 298
Score = 53 (23.7 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSI 361
P V L + KA+ V G + +++ G+VY +G + L + A A V +
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEA-AFLPVPQKIEAHC 261
Query: 362 FQYLQIWLNLSSYRHL 377
FQ ++ S + HL
Sbjct: 262 FQNEKVTAIWSGWTHL 277
Score = 47 (21.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECE 299
+ G++ TWG YG LG E E
Sbjct: 282 ETGKMFTWGRADYGQLGRKLETYE 305
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 158 (60.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS+ ++ KG VY+ G G+LGHG + PR + L T++++D
Sbjct: 188 HSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDD 247
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 171
G VY FG + F + + P+ +++ LK ++ A G F T + +RE VY
Sbjct: 248 GCVYTFGLNMFHQLGI-IPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VY 305
Query: 172 TFSWGNDARLGHHTEPN 188
T N +LGH +PN
Sbjct: 306 TLGL-NGGQLGHLLDPN 321
Score = 138 (53.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 34/104 (32%), Positives = 50/104 (48%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 300
S+ + HP L++ F + Q G+V T G GR G LGHG+E+
Sbjct: 159 SQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCL 218
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VP++V+ L+ VA T V+++DG VY+FG LG
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLG 262
Score = 124 (48.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 41/134 (30%), Positives = 58/134 (43%)
Query: 52 PGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLXXXXXXXXXXXXXXTM 108
P H + T VY++G N++ LGHG+ + P + S ++
Sbjct: 131 PTHVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSV 190
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+S GQVY G G +G + T LV P+LVE L Q A T VL+ +G
Sbjct: 191 FLSQKGQVYTCGHGRGGRLGHGDEQTCLV--PRLVEGLSGHNCSQVAAAKDHTVVLTDDG 248
Query: 169 RVYTFSWGNDARLG 182
VYTF +LG
Sbjct: 249 CVYTFGLNMFHQLG 262
Score = 104 (41.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 27/89 (30%), Positives = 46/89 (51%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 168
+D +VY +G ++ +G Q +K P+L++ S ++V Q + F + LS++G
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGSQNSK--HHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKG 196
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGRGGRLGHGDEQTCLVPRLVEG 225
Score = 70 (29.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 289 GCLGH----GNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY 333
G LGH E+C + P+ V AL+ D+ VA D T V+ GD+Y
Sbjct: 312 GQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIY 362
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 162 (62.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 44/162 (27%), Positives = 79/162 (48%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
+ G HS+A+ + G V+++G N+ GQ+G G+T + PR + + L
Sbjct: 132 EVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQT 191
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + D G+VY +G + G+ G G +L +P V +L ++ V Q G T L+
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--TPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG +Y + +LG + N + P ++ +E V++I
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIM--VEKERVIEI 289
Score = 142 (55.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 47/173 (27%), Positives = 79/173 (45%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLXXX 95
EA C ++ G G H + T GVVY++G N QLG+GTT + P + +L
Sbjct: 69 EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIK 128
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQA 154
+M ++ G+V+A+G ++ G+ G T +P+ V + +I VV
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSG--STANQPTPRKVTNCLHIKRVVGI 186
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
A G + + G VY + + + +LG N + P + L ++ V QI
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP-VRVAALHSVCVNQI 238
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 37/138 (26%), Positives = 62/138 (44%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
C + IA G S+AV G VY +G N +GQLG G + P + +L
Sbjct: 177 CLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVN 236
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
T+ ++D G +YA+G +++G+ G + L + +VE + + + A
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK-ERVIEIAACHSA 295
Query: 159 FFTAVLSREGRVYTFSWG 176
+A ++ G VY WG
Sbjct: 296 HTSAAKTQGGHVYM--WG 311
Score = 77 (32.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT--GDYTTFVVSEDGDVYS 334
+G + WG YG LG GN+ P + + + I +A +T+ ++ G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE-RVIEIAACHSAHTSAAKTQGGHVYM 309
Query: 335 FG-C-GESASLGH 345
+G C G+S +L H
Sbjct: 310 WGQCRGQSVTLPH 322
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 151 (58.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 46/152 (30%), Positives = 69/152 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
Q AG H VT + +Y++ G+ GQLGHG +P+ + L
Sbjct: 390 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVS 449
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFF 160
T+ ++D GQ+YAFG D +G V G +++ QL L N V Q + G+
Sbjct: 450 CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNP-VEQVSCGDNH 508
Query: 161 TAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
VL+R VY++ G RLG +E + P
Sbjct: 509 VVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTP 540
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 36/147 (24%), Positives = 56/147 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q G H + +T VYS+G G+LG + E+ + P+ +
Sbjct: 501 QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDG 560
Query: 107 TMLISDAGQVYAFGKDSFG-----EAEYGV------QGTKLVTSPQLVESLKNIFVVQAA 155
T L++ +G+V A G + F + G+ TS L + L + A
Sbjct: 561 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 620
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLG 182
G TA L GR+ TF +LG
Sbjct: 621 PGKTHTAALDERGRLLTFGCNKCGQLG 647
Score = 74 (31.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR+ T+G + G LG GN + + + L + I V+ GD T ++D ++++G
Sbjct: 633 GRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 692
Query: 337 CGESASL 343
G + L
Sbjct: 693 NGGNGRL 699
Score = 51 (23.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 304 VVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ + L+ K +A G T + E G + +FGC + LG
Sbjct: 607 LAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLG 647
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 164 (62.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 45/162 (27%), Positives = 79/162 (48%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
+ G HS+A+ + G V+++G N+ GQ+G G+T + PR + + L
Sbjct: 161 EVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQT 220
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + D G+VY +G + G+ G G +L +P V +L ++ V Q G T L+
Sbjct: 221 SSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--TPVRVAALHSVCVNQIVCGYAHTLALT 278
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG +Y + +LG + N + P ++ +E VV+I
Sbjct: 279 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIM--VEKERVVEI 318
Score = 143 (55.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 47/173 (27%), Positives = 79/173 (45%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLXXX 95
EA C ++ G G H + T GVVY++G N QLG+GTT + P + +L
Sbjct: 98 EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIK 157
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQA 154
+M ++ G+V+A+G ++ G+ G T +P+ V + +I VV
Sbjct: 158 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSG--STANQPTPRKVTNCLHIKRVVSI 215
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
A G + + G VY + + + +LG N + P + L ++ V QI
Sbjct: 216 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP-VRVAALHSVCVNQI 267
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/138 (26%), Positives = 63/138 (45%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
C + +IA G S+AV G VY +G N +GQLG G + P + +L
Sbjct: 206 CLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVN 265
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
T+ ++D G +YA+G +++G+ G + L + +VE + + + A
Sbjct: 266 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK-ERVVEIAACHSA 324
Query: 159 FFTAVLSREGRVYTFSWG 176
+A ++ G VY WG
Sbjct: 325 HTSAAKTQGGHVYM--WG 340
Score = 76 (31.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT--GDYTTFVVSEDGDVYS 334
+G + WG YG LG GN+ P + + + + +A +T+ ++ G VY
Sbjct: 280 EGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE-RVVEIAACHSAHTSAAKTQGGHVYM 338
Query: 335 FG-C-GESASLGH 345
+G C G+S +L H
Sbjct: 339 WGQCRGQSVTLPH 351
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 178 (67.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 50/151 (33%), Positives = 74/151 (49%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q AG HS+A++ G +YS+G N GQLG G T E P I +L
Sbjct: 194 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSH 253
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN-FFT-AVL 164
T L++ G V+ FG +G+ G T+ P+LV L V Q A G+ + T A +
Sbjct: 254 TALLTKDGLVFTFGAGKYGQL--GHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYV 311
Query: 165 SREGRVYTFSWGNDARLGHHTEPNDVEPHPL 195
S G+V++F G + +LG+ N + P P+
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGGTHNQLIPLPM 342
Score = 178 (67.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 51/173 (29%), Positives = 85/173 (49%)
Query: 40 CCRRENS--QAIAGPGHSIAVTSK--GVVYSFGSNSSGQLGHGTTEEEW-RPRPIRSLXX 94
C +E S Q G HS+A++ G ++++G N GQLG G P+ + L
Sbjct: 130 CILQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSG 189
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA 154
+M +S +G +Y++G++ G+ G+ T P L+E+L N V
Sbjct: 190 VPLVQISAGKAHSMALSMSGNIYSWGRNDLGQL--GLGHTNGEDFPSLIEALDNQKVEFL 247
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
A G TA+L+++G V+TF G +LGH++ N++ P L+ L V Q+
Sbjct: 248 ACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPR-LVTELAGNRVTQV 299
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 54/199 (27%), Positives = 82/199 (41%)
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIX 208
++Q G++ + LS+ F+WG + +LG + L+ L +P+VQI
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQIS 196
Query: 209 XXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXX 268
SG +YS E P LIE N +
Sbjct: 197 AGKAHSMALSM--SGN-IYSWGRNDLGQLGLGHTNGEDFPSLIEALD--NQKVEFLACGG 251
Query: 269 XXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD--YTTFVV 326
+DG V T+G G+YG LGH + + E P++V L + VA G +T V
Sbjct: 252 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYV 311
Query: 327 SEDGDVYSFGCGESASLGH 345
S+ G V+SFG G+ LG+
Sbjct: 312 SDLGKVFSFGSGKEGQLGN 330
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 51/192 (26%), Positives = 82/192 (42%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+++A+G++ G+ G T + T PQLVE L + +VQ + G + LS G +Y
Sbjct: 156 GELFAWGQNLHGQLGVGRLFTSIPT-PQLVEHLSGVPLVQISAGKAHSMALSMSGNIY-- 212
Query: 174 SWG-ND-ARLG-HHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMAVYSVX 230
SWG ND +LG HT D P L+ L+N V + G+ V++
Sbjct: 213 SWGRNDLGQLGLGHTNGEDF-PS-LIEALDNQKVEFLACGGSHTALLTKD--GL-VFTFG 267
Query: 231 XXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGC 290
S +E PRL+ + + G+V ++G G+ G
Sbjct: 268 AGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQ 327
Query: 291 LGHGNEECESVP 302
LG+G + +P
Sbjct: 328 LGNGGTHNQLIP 339
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML- 109
G H+ +T G+V++FG+ GQLGH +T+ E RPR + L L
Sbjct: 250 GGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLA 309
Query: 110 -ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES 145
+SD G+V++FG G+ G +L+ P + S
Sbjct: 310 YVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPS 346
Score = 128 (50.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + +WG G LG G+ E P +++AL++ K +A G T ++++DG V++FG
Sbjct: 209 GNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGA 268
Query: 338 GESASLGHNA 347
G+ LGHN+
Sbjct: 269 GKYGQLGHNS 278
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 152 (58.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 41/138 (29%), Positives = 68/138 (49%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS+ ++ KG +Y+ G G+LGHG + PR + L T+++++
Sbjct: 191 HSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTED 250
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVES--LKNIFVVQAAIGNFFTAVLSREGRV 170
G VY FG ++F + G+ S P+ V++ LK V+ A G F T + ++E V
Sbjct: 251 GCVYTFGLNTFHQL--GILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-V 307
Query: 171 YTFSWGNDARLGHHTEPN 188
YT N +LG+ +PN
Sbjct: 308 YTMGL-NGGQLGYLLDPN 324
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 247 HPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
HP L++ F ++ G++ T G G+ G LGHG+E+ VP++V+
Sbjct: 168 HPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVE 227
Query: 307 ALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
L+ + +A T V++EDG VY+FG LG
Sbjct: 228 GLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLG 265
Score = 119 (46.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/121 (29%), Positives = 54/121 (44%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXX--XXTMLISDAGQVYAFGK 121
VY++G+N + LGHG + + P + ++ +S GQ+Y G
Sbjct: 147 VYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGH 206
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G +G + T LV P+LVE L + Q A T VL+ +G VYTF +L
Sbjct: 207 GQGGRLGHGDEQTCLV--PRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQL 264
Query: 182 G 182
G
Sbjct: 265 G 265
Score = 96 (38.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 26/89 (29%), Positives = 45/89 (50%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KN-IFVVQAAIGNFFTAVLSREG 168
+D +VY +G + +G Q +K P+LV+ +N +++ Q + F + LS +G
Sbjct: 142 TDLTEVYTWGNNINFTLGHGGQQSK--HHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKG 199
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
++YT G RLGH E + P + G
Sbjct: 200 QIYTCGHGQGGRLGHGDEQTCLVPRLVEG 228
Score = 75 (31.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 286 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 339
G+ G L N E+C + P+ V AL+ DV V+ D T V+E GD+Y + C +
Sbjct: 315 GQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCVTERGDIYLLADYQCKK 374
Query: 340 SAS 342
AS
Sbjct: 375 IAS 377
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 159 (61.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 45/151 (29%), Positives = 65/151 (43%)
Query: 47 QAIAGPGHSIAVTSKGVVYSF-----GSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXX 101
Q AG H VT + +Y++ GS GQLGHG +P+ + L
Sbjct: 355 QVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVS 414
Query: 102 XXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
T+ I+D GQ+Y+FG D +G V P LV+ N V Q + G+
Sbjct: 415 CGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHI 474
Query: 162 AVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
L+R VY++ G RLG +E + P
Sbjct: 475 MALTRSKSVYSWGCGEYGRLGLDSEDDVYSP 505
Score = 62 (26.9 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
GR+ T+G + G LG G+ + + L + I V+ GD T + D ++++G
Sbjct: 598 GRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWG 657
Query: 337 CGESASL 343
G + L
Sbjct: 658 NGGNGRL 664
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 175 (66.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 56/190 (29%), Positives = 89/190 (46%)
Query: 44 ENSQAI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXX 99
EN Q I G HS+A+T+ G ++ +G N+ GQLG + + PR ++SL
Sbjct: 116 ENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQ 175
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
+ ++S +G V+ +G +S G+ G + V P +V SLK +V + G
Sbjct: 176 ISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFV--PTVVNSLKRKKIVSISCGGE 233
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQIXXXXXXXXXXX 218
TA L++ G V+TF G +LGH++ + E HP L+ L V Q+
Sbjct: 234 HTAALAKGGTVFTFGSGGFGQLGHNSFKD--EHHPRLVAELWGSKVSQVTCGRNHTLVST 291
Query: 219 XQPSGMAVYS 228
P +YS
Sbjct: 292 ASPK--LIYS 299
Score = 168 (64.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 46/159 (28%), Positives = 70/159 (44%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
++ C +Q AG HS ++ GVV+ +G NS+GQLG G T + + P + SL
Sbjct: 166 QSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKI 225
Query: 98 XXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
T ++ G V+ FG FG+ G K P+LV L V Q G
Sbjct: 226 VSISCGGEHTAALAKGGTVFTFGSGGFGQL--GHNSFKDEHHPRLVAELWGSKVSQVTCG 283
Query: 158 NFFTAVLSREGR-VYTFSWGNDARLGHHTEPNDVEPHPL 195
T V + + +Y+F G +LG+ + P P+
Sbjct: 284 RNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPV 322
Score = 147 (56.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 55/206 (26%), Positives = 84/206 (40%)
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLE 200
++ L+N V+Q A G+ + L+ +G++ F WG +A +LG E + L +L
Sbjct: 112 LKGLENRQVIQIACGDQHSMALTNDGQL--FVWGENALGQLGLRKEQAGTQSPRHLQSLC 169
Query: 201 NIPVVQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQ 260
IPV QI SG+ V+ TD P ++ + +
Sbjct: 170 GIPVAQISAGGNHSFVLSL--SGV-VFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIV 226
Query: 261 PXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGD 320
G G V T+G G +G LGH + + E P++V L K V G
Sbjct: 227 SISCGGEHTAALAKG--GTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGR 284
Query: 321 YTTFVVSEDGD-VYSFGCGESASLGH 345
T V + +YSFGCG LG+
Sbjct: 285 NHTLVSTASPKLIYSFGCGMQGQLGN 310
Score = 119 (46.9 bits), Expect = 0.00076, P = 0.00076
Identities = 57/246 (23%), Positives = 100/246 (40%)
Query: 88 PIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVT-SPQLVESL 146
P++ L +M +++ GQ++ +G+++ G+ G++ + T SP+ ++SL
Sbjct: 111 PLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQL--GLRKEQAGTQSPRHLQSL 168
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWG-NDA-RLGHHTEPNDVEPHPLLGTLENIPV 204
I V Q + G + VLS G V F WG N A +LG + P ++ +L+ +
Sbjct: 169 CGIPVAQISAGGNHSFVLSLSGVV--FGWGGNSAGQLGLGDTTDRFVP-TVVNSLKRKKI 225
Query: 205 VQIXXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXX 264
V I G V++ S DE HPRL+ + +
Sbjct: 226 VSISCGGEHTAALA---KGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTC 282
Query: 265 XXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECESVPKVVQA---LNDVKAIH-VATGD 320
+ ++G G G LG+G + +SVP V ND I + G+
Sbjct: 283 GRNHTLVSTASPK-LIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGE 341
Query: 321 YTTFVV 326
+F +
Sbjct: 342 NHSFAL 347
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 142 (55.0 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS+ ++ KG VY+ G G+LGHG + PR + L T+++++
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTED 247
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 171
G VY FG + F + + P+ +++ LK ++ A G F T + +RE VY
Sbjct: 248 GCVYTFGLNIFHQLGI-IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VY 305
Query: 172 TFSWGNDARLGHHTEPN 188
T N +LG +PN
Sbjct: 306 TMGL-NGGQLGCLLDPN 321
Score = 139 (54.0 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 35/104 (33%), Positives = 49/104 (47%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 300
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VP++V+ LN VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 124 (48.7 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIR--SLXXXXXXXXXXXXXXTMLISDAGQVYAFGK 121
VY++G N++ LGHG+ + P + S ++ +S GQVY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G +G + T LV P+LVE L Q A T VL+ +G VYTF +L
Sbjct: 204 GPGGRLGHGDEQTCLV--PRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 182 G 182
G
Sbjct: 262 G 262
Score = 103 (41.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 168
+D VY +G ++ +G Q +K P+LV+ S I++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKG 196
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 81 (33.6 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 286 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 339
G+ GCL N E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 340 SAS 342
AS
Sbjct: 372 MAS 374
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 163 (62.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 45/162 (27%), Positives = 79/162 (48%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
+ G HS+A+ + G V+++G N+ GQ+G G+T + PR + + L
Sbjct: 132 EVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQT 191
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + D G+VY +G + G+ G G +L +P V +L ++ V Q G T L+
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--TPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG +Y + +LG + N + P ++ +E VV+I
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIM--VEKERVVEI 289
Score = 141 (54.7 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 47/173 (27%), Positives = 79/173 (45%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLXXX 95
EA C ++ G G H + T GVVY++G N QLG+GTT + P + +L
Sbjct: 69 EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIK 128
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQA 154
+M ++ G+V+A+G ++ G+ G T +P+ V + +I VV
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSG--STTNQPTPRKVTNCLHIKRVVGI 186
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
A G + + G VY + + + +LG N + P + L ++ V QI
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP-VRVAALHSVCVNQI 238
Score = 127 (49.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 37/138 (26%), Positives = 62/138 (44%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
C + IA G S+AV G VY +G N +GQLG G + P + +L
Sbjct: 177 CLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVN 236
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
T+ ++D G +YA+G +++G+ G + L + +VE + + + A
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK-ERVVEIAACHSA 295
Query: 159 FFTAVLSREGRVYTFSWG 176
+A ++ G VY WG
Sbjct: 296 HTSAAKTQGGHVYM--WG 311
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 51/240 (21%), Positives = 97/240 (40%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ ++D +V+ FG + G + LV P+ +E+L + + G+ +LS E
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQSTLV--PKKLEALCGKKIKSLSYGSGPHVLLSTE 92
Query: 168 GRVYTFSWGND--ARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSGMA 225
V ++WG++ ++LG+ T + P + N+ + Q+ +
Sbjct: 93 DGV-VYAWGHNGYSQLGNGTTNQGIAP---IQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 226 VYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQD-GRVCTWG 284
V++ S T++ PR + L+++ D G V WG
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTN--CLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
+ G LG GN + P V AL+ V + G T ++++G +Y++G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 73 (30.8 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT--GDYTTFVVSEDGDVYS 334
+G + WG YG LG GN+ P + + + + +A +T+ ++ G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE-RVVEIAACHSAHTSAAKTQGGHVYM 309
Query: 335 FG-C-GESASLGH 345
+G C G+S L H
Sbjct: 310 WGQCRGQSVVLPH 322
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 191 (72.3 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 66/301 (21%), Positives = 123/301 (40%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
Q I G + + + G V + G S G+LG G +++ I +L
Sbjct: 3288 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS 3347
Query: 107 ---TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV 163
+M ++++G+V+++G +G+ +G + P+ +E+L+ VVQ + G +AV
Sbjct: 3348 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAV 3405
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPSG 223
++ +G+++TF G+ RLG N P + LE + Q+ G
Sbjct: 3406 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSAD--G 3462
Query: 224 MAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTW 283
V++ + T + P+ ++ + ++ +DG V T+
Sbjct: 3463 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALT--KDGHVYTF 3520
Query: 284 GWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
G R L G + P+ + L V VA G T ++ GDVY++G L
Sbjct: 3521 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 3580
Query: 344 G 344
G
Sbjct: 3581 G 3581
Score = 177 (67.4 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA E Q G HS VTS G +++FG+ G+LG G T + P + +L
Sbjct: 3386 EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQI 3445
Query: 98 XXXXXXXXXTMLIS-DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
T+ +S D V+AFG +G+ G K +SPQ V+ L I + + A
Sbjct: 3446 GQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVAC 3503
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG 182
G F+ L+++G VYTF G D +G
Sbjct: 3504 GTQFSVALTKDGHVYTF--GQDRLIG 3527
Score = 42 (19.8 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G V WG G LG G+ P +V L ++ G
Sbjct: 3567 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAG 3608
Score = 37 (18.1 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 10 PMTEAERQDLKQKCGGSWKLVLRFLLAGEACCRRENSQAIAGPG 53
P E E ++ + + + K+ FL A E R+ + +G G
Sbjct: 673 PEPEDEEEEREHEVMTAGKIFQCFLSAREVARSRDRDRMNSGAG 716
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 135 (52.6 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 43/142 (30%), Positives = 65/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 71 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++D G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTDDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 188 TADGDLYTLGCGEQGQLGRVPE 209
Score = 132 (51.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 50/160 (31%), Positives = 75/160 (46%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
H T G+V + G GQLG G E R +P T+ +S +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVME-RKKPALVSIPEDVVQAEAGGMHTVCLSKS 85
Query: 114 GQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTDDGRV- 140
Query: 172 TFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
F WG N+ +G EP P+ L+ +PVV++
Sbjct: 141 -FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-VPVVKV 177
Score = 69 (29.3 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 28/84 (33%), Positives = 33/84 (39%)
Query: 277 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 320
DG + T G G G LG G + E VPK V + HV G
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 321 YTTFVVSEDGDVYSFGCGESASLG 344
Y TF +S +G VY FG LG
Sbjct: 250 YFTFAISHEGHVYGFGLSNYHQLG 273
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 142 (55.0 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS+ ++ KG VY+ G G+LGHG + PR + L T+++++
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTED 247
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 171
G VY FG + F + + P+ +++ LK ++ A G F T + +RE VY
Sbjct: 248 GCVYTFGLNIFHQLGI-IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VY 305
Query: 172 TFSWGNDARLGHHTEPN 188
T N +LG +PN
Sbjct: 306 TMGL-NGGQLGCLLDPN 321
Score = 139 (54.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 35/104 (33%), Positives = 49/104 (47%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 300
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VP++V+ LN VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 124 (48.7 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIR--SLXXXXXXXXXXXXXXTMLISDAGQVYAFGK 121
VY++G N++ LGHG+ + P + S ++ +S GQVY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G +G + T LV P+LVE L Q A T VL+ +G VYTF +L
Sbjct: 204 GPGGRLGHGDEQTCLV--PRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 182 G 182
G
Sbjct: 262 G 262
Score = 103 (41.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 168
+D VY +G ++ +G Q +K P+LV+ S I++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKG 196
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 81 (33.6 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 286 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 339
G+ GCL N E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 340 SAS 342
AS
Sbjct: 372 MAS 374
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 142 (55.0 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 39/137 (28%), Positives = 64/137 (46%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS+ ++ KG VY+ G G+LGHG + PR + L T+++++
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTED 247
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 171
G VY FG + F + + P+ +++ LK ++ A G F T + +RE VY
Sbjct: 248 GCVYTFGLNIFHQLGI-IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VY 305
Query: 172 TFSWGNDARLGHHTEPN 188
T N +LG +PN
Sbjct: 306 TMGL-NGGQLGCLLDPN 321
Score = 139 (54.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 35/104 (33%), Positives = 49/104 (47%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 300
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VP++V+ LN VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 124 (48.7 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIR--SLXXXXXXXXXXXXXXTMLISDAGQVYAFGK 121
VY++G N++ LGHG+ + P + S ++ +S GQVY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G +G + T LV P+LVE L Q A T VL+ +G VYTF +L
Sbjct: 204 GPGGRLGHGDEQTCLV--PRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 182 G 182
G
Sbjct: 262 G 262
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 168
+D VY +G ++ +G Q +K P+LV+ S I++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKG 196
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 81 (33.6 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 286 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 339
G+ GCL N E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 340 SAS 342
AS
Sbjct: 372 MAS 374
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 50/177 (28%), Positives = 76/177 (42%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTTEEEWRP----------RPIR 90
+E + + G S+ +TS G V + GSN +LG H + +EE P P+
Sbjct: 501 QEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLG 560
Query: 91 S--LXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
S L + I+ +G Y FG + G+ G ++ +P V+ L+
Sbjct: 561 SAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQL--GTSSRRVSRAPCRVQGLEG 618
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTE----PNDV---EPHPLLGT 198
I +V A G+ FT + EG VY++ G RLG E P V E HP + T
Sbjct: 619 IKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVT 675
Score = 126 (49.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + T+G G GCLGHGN S P +V+AL + + VA G +S DG+++++G
Sbjct: 416 GIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGR 475
Query: 338 GESASLG 344
G+ LG
Sbjct: 476 GDGGRLG 482
Score = 110 (43.8 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 33/137 (24%), Positives = 57/137 (41%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG + +P + +L + +S G+++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELF 471
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
A+G+ G G + + PQ V + G + +L+ GRV
Sbjct: 472 AWGRGDGGRLGLGTRESH--NCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNR 529
Query: 178 DARLGHHTEPNDVEPHP 194
+LG D EP P
Sbjct: 530 FNKLGLDHLSLDEEPVP 546
Score = 108 (43.1 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G T+G ++G LG + P VQ L +K + VA GD T V +G+VYS+G
Sbjct: 586 GDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGK 645
Query: 338 GESASLG 344
G LG
Sbjct: 646 GTRGRLG 652
Score = 104 (41.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 43/184 (23%), Positives = 74/184 (40%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA E Q G H +A+++ G ++++G G+LG GT E P+ +
Sbjct: 444 EALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEA 503
Query: 98 XXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP---QLVESLKNIFVVQA 154
+M+++ G+V A G + F + G+ L P Q VE + + +
Sbjct: 504 QRVVCGIDSSMILTSPGRVLACGSNRFNKL--GLDHLSLDEEPVPYQQVEEALSFTPLGS 561
Query: 155 A-----------IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
A +G +A ++ G YTF +LG + P + G LE I
Sbjct: 562 APLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQG-LEGIK 620
Query: 204 VVQI 207
+V +
Sbjct: 621 MVMV 624
Score = 89 (36.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 409 TACLTDRGIIMTFGSGSNGCLGHG--NLTDISQPTIVEALLGYEMVQVACGASHVLALST 466
Query: 167 EGRVYTFSWGNDARLG 182
+G ++ + G+ RLG
Sbjct: 467 DGELFAWGRGDGGRLG 482
Score = 74 (31.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+ +E + + A G+ FTA L+ G + TF G++ LGH D+ ++ L
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNL-TDISQPTIVEALL 447
Query: 201 NIPVVQI 207
+VQ+
Sbjct: 448 GYEMVQV 454
Score = 60 (26.2 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
G +G V +WG G G LG +E+ +P+ VQ
Sbjct: 635 GAEGEVYSWGKGTRGRLGRRDEDA-GLPRPVQ 665
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
++SP + L N VVQ A G A ++R GR+
Sbjct: 327 LSSPLRLPML-NTEVVQVAAGRTQKAGVTRSGRL 359
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 135 (52.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 35/123 (28%), Positives = 55/123 (44%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI-SDA 113
S V S G V+SFG N GQ G+ +W P +R T+L S+
Sbjct: 192 SFVVDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRGDVEGSKIQKVSGSTDTLLACSEN 251
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G+++ +G+ +G+A +L TS + SL I V + ++V++R R F
Sbjct: 252 GEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLGPIICVDSTQ----SSVVARNSRGNVF 307
Query: 174 SWG 176
WG
Sbjct: 308 VWG 310
Score = 73 (30.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAI-HVATGDYTTFVVSEDGDVYSFG 336
G V WG G G +G E ++ ++ Q L D K + V+ G+ ++EDG ++ +G
Sbjct: 304 GNVFVWGVGVLG-MGPEAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFIWG 362
Query: 337 CGESASLG 344
+SLG
Sbjct: 363 ENRYSSLG 370
Score = 72 (30.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVVS 327
+DGR+ WG RY LG G+++ + P + DV+ A G D++ F+V+
Sbjct: 354 EDGRLFIWGENRYSSLGLGHQKRQLFPYQLFLPGDVRK--AALGPDHSLFLVN 404
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 141 (54.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 43/135 (31%), Positives = 64/135 (47%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG S A+T G ++ +G NS+GQLG G P+ + + L
Sbjct: 146 AGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNM--GQSIHWVSCGYRHSAL 203
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTS--PQLVESLKNIFVVQAAIGNFFTAVLSRE 167
++D+G VY+FG+ + G G+ +L PQ VESL + V+Q A G T L+ E
Sbjct: 204 VTDSGDVYSFGESADGRL--GLSAHQLANHSYPQRVESLHS--VLQVACGGKHTLALT-E 258
Query: 168 GRVYTFSWGNDARLG 182
+Y F G +LG
Sbjct: 259 DELYCFGGGEFGQLG 273
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 40/139 (28%), Positives = 61/139 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLG---HGTTEEEWRPRPIRSLXXXXXXXXXXXXXXT 107
G HS VT G VYSFG ++ G+LG H + P+ + SL T
Sbjct: 197 GYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSY-PQRVESLHSVLQVACGGKH--T 253
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ +++ ++Y FG FG+ G + SP V + V G +A+++
Sbjct: 254 LALTE-DELYCFGGGEFGQLGLGTL-VFVADSPVAVGHFRKGRVTHVTCGEQHSALITDS 311
Query: 168 GRVYTFSWGNDARLGHHTE 186
G +YTF G +LGH E
Sbjct: 312 GLLYTFGDGRHGKLGHGDE 330
Score = 106 (42.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G HS VT +G ++ FG N+ GQLG +P ++ L T++
Sbjct: 42 GQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHTLVS 101
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQA-AIGNFFTAVLSREGR 169
+ G++ A G +S G+ G + S Q + + ++ + G+ +A L+ +GR
Sbjct: 102 TSQGEILAAGGNSDGQLGLGHCNDSI--SFQRLRPFCDYAPIKLLSAGDHTSAALTEDGR 159
Query: 170 VYTFSWGNDA--RLGHHTEPNDVEPHPL 195
+ F WG+++ +LG + + + P L
Sbjct: 160 L--FLWGDNSAGQLGFGNDSHALLPKEL 185
Score = 82 (33.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEE-CESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
+D C +G G +G LG G P V + HV G+ + ++++ G +Y+
Sbjct: 258 EDELYC-FGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYT 316
Query: 335 FGCGESASLGH 345
FG G LGH
Sbjct: 317 FGDGRHGKLGH 327
Score = 67 (28.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIHVATG 319
G + T+G GR+G LGHG+E + P V Q + + VA G
Sbjct: 312 GLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACG 355
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 151 (58.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+V +WG GR+G LGHG E E P++++AL + VA G + + VSE GD+Y +G
Sbjct: 177 GQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGW 236
Query: 338 GESASLG---HNAIADGQ 352
ES L N DG+
Sbjct: 237 NESGQLALPTRNLAEDGE 254
Score = 121 (47.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 43/140 (30%), Positives = 62/140 (44%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
++ AG HS+ V+ G +Y +G N SGQL P R+L
Sbjct: 213 AEVAAGGWHSVCVSETGDIYIWGWNESGQLA----------LPTRNLAEDGETVAREA-- 260
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP--QLVESLKNIFVVQAAIGNFFTAV 163
T L D QV K + G AE G + P L++ V+A+ G+ TAV
Sbjct: 261 -TELNEDGSQV----KRT-GGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAV 314
Query: 164 LSREGRVYTFSWGNDARLGH 183
++R G +YT+ WG +LGH
Sbjct: 315 VTRTGELYTWGWGKYGQLGH 334
Score = 119 (46.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ + + G V+S+G GQLGHGT E E PR + +L ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 111 SDAGQVYAFGKDSFGE 126
S+ G +Y +G + G+
Sbjct: 226 SETGDIYIWGWNESGQ 241
Score = 105 (42.0 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+L+ AGQV+++G G+ +G +L P+L+E+L+ + + + A G + + +S
Sbjct: 171 LLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EPRLLEALQGLVMAEVAAGGWHSVCVSET 228
Query: 168 GRVYTFSWGNDARL 181
G +Y + W +L
Sbjct: 229 GDIYIWGWNESGQL 242
Score = 87 (35.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVS-EDG 330
G + TWGWG+YG LGH + P+ V+ D VKA V G + T+V + E G
Sbjct: 319 GELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKA--VTCGPWNTYVYAVEKG 374
Score = 64 (27.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
A+ + G T VV+ G++Y++G G+ LGH
Sbjct: 302 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 334
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 163 (62.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 45/162 (27%), Positives = 79/162 (48%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
+ G HS+A+ + G V+++G N+ GQ+G G+T + PR + + L
Sbjct: 132 EVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQT 191
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + D G+VY +G + G+ G G +L +P V +L ++ V Q G T L+
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--TPVRVAALHSVCVNQIVCGYAHTLALT 249
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG +Y + +LG + N + P ++ +E VV+I
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIM--VEKERVVEI 289
Score = 137 (53.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 46/173 (26%), Positives = 78/173 (45%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLXXX 95
E C ++ G G H + T GVVY++G N QLG+GTT + P + +L
Sbjct: 69 EGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIK 128
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQA 154
+M ++ G+V+A+G ++ G+ G T +P+ V + +I VV
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSG--STANQPTPRKVTNCLHIKRVVGI 186
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
A G + + G VY + + + +LG N + P + L ++ V QI
Sbjct: 187 ACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP-VRVAALHSVCVNQI 238
Score = 127 (49.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 37/138 (26%), Positives = 62/138 (44%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
C + IA G S+AV G VY +G N +GQLG G + P + +L
Sbjct: 177 CLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVN 236
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
T+ ++D G +YA+G +++G+ G + L + +VE + + + A
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK-ERVVEIAACHSA 295
Query: 159 FFTAVLSREGRVYTFSWG 176
+A ++ G VY WG
Sbjct: 296 HTSAAKTQGGHVYM--WG 311
Score = 73 (30.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT--GDYTTFVVSEDGDVYS 334
+G + WG YG LG GN+ P + + + + +A +T+ ++ G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE-RVVEIAACHSAHTSAAKTQGGHVYM 309
Query: 335 FG-C-GESASLGH 345
+G C G+S L H
Sbjct: 310 WGQCRGQSVILPH 322
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 151 (58.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+V +WG GR+G LGHG E E P++++AL + VA G + + VSE GD+Y +G
Sbjct: 177 GQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGW 236
Query: 338 GESASLG---HNAIADGQ 352
ES L N DG+
Sbjct: 237 NESGQLALPTRNLAEDGE 254
Score = 119 (46.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ + + G V+S+G GQLGHGT E E PR + +L ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 111 SDAGQVYAFGKDSFGE 126
S+ G +Y +G + G+
Sbjct: 226 SETGDIYIWGWNESGQ 241
Score = 105 (42.0 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+L+ AGQV+++G G+ +G +L P+L+E+L+ + + + A G + + +S
Sbjct: 171 LLLDAAGQVFSWGGGRHGQLGHGTLEAEL--EPRLLEALQGLVMAEVAAGGWHSVCVSET 228
Query: 168 GRVYTFSWGNDARL 181
G +Y + W +L
Sbjct: 229 GDIYIWGWNESGQL 242
Score = 88 (36.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 125 GEAEYGVQGTKLVTSP--QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
G AE G + P L++ V+A+ G+ TAV++R G +YT+ WG +LG
Sbjct: 272 GGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 331
Query: 183 H 183
H
Sbjct: 332 H 332
Score = 87 (35.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND----VKAIHVATGDYTTFVVS-EDG 330
G + TWGWG+YG LGH + P+ V+ D VKA V G + T+V + E G
Sbjct: 317 GELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKA--VTCGPWNTYVYAVEKG 372
Score = 67 (28.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQL 75
++ AG HS+ V+ G +Y +G N SGQL
Sbjct: 213 AEVAAGGWHSVCVSETGDIYIWGWNESGQL 242
Score = 64 (27.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
A+ + G T VV+ G++Y++G G+ LGH
Sbjct: 300 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 332
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 162 (62.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
+ G HS+A+ + G ++++G N+ GQ+G G+T + PR + + L
Sbjct: 132 EVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQT 191
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + D+G+VY +G + G+ G G +L +P V +L + V Q G T L+
Sbjct: 192 SSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--TPVRVAALHGMCVNQIVCGYAHTLALT 249
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG +Y + +LG ++ N + P ++ +E V++I
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQIM--VEKERVIEI 289
Score = 138 (53.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 40/157 (25%), Positives = 69/157 (43%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLXXX 95
EA C ++ G G H + T GVVY++G N QLG+GTT + P + +L
Sbjct: 69 EALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIK 128
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+M ++ G+++A+G ++ G+ G + T ++ L VV A
Sbjct: 129 QVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ-PTPRKVTNCLHTKRVVNIA 187
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEP 192
G + + G VY + + + +LG N + P
Sbjct: 188 CGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTP 224
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/138 (26%), Positives = 63/138 (45%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
C + IA G S+AV G VY +G N +GQLG G + P + +L
Sbjct: 177 CLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVN 236
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
T+ ++D G +YA+G +++G+ G + L++ Q++ + + + A
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNN-LLSPTQIMVEKERVIEIAACHST 295
Query: 159 FFTAVLSREGRVYTFSWG 176
+A ++ G VY WG
Sbjct: 296 HTSAAKTQGGHVYM--WG 311
Score = 71 (30.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT--GDYTTFVVSEDGDVYS 334
+G + WG YG LG G++ P + + + I +A +T+ ++ G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKE-RVIEIAACHSTHTSAAKTQGGHVYM 309
Query: 335 FG-C-GESASLGH 345
+G C G+S L H
Sbjct: 310 WGQCRGQSVILPH 322
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 146 (56.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+V +WG GR+G LGHG E E P++++AL ++ VA G + + +SE GD+Y +G
Sbjct: 180 GQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGW 239
Query: 338 GESASL 343
ES L
Sbjct: 240 NESGQL 245
Score = 116 (45.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H + + + G V+S+G+ GQLGHGT E E PR + +L ++ +
Sbjct: 169 GAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCL 228
Query: 111 SDAGQVYAFGKDSFGE 126
S+ G +Y +G + G+
Sbjct: 229 SETGDIYIWGWNESGQ 244
Score = 105 (42.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+L+ AGQV+++G G+ +G +L P+L+E+L+ + + + A G + + LS
Sbjct: 174 LLLCAAGQVFSWGAGRHGQLGHGTLEAEL--EPRLLEALQGLRMAKVAAGGWHSVCLSET 231
Query: 168 GRVYTFSWGNDARL 181
G +Y + W +L
Sbjct: 232 GDIYIWGWNESGQL 245
Score = 84 (34.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
P L++ V A+ G+ TAV++R G +YT+ WG +LGH
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGH 335
Score = 84 (34.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQAL--NDVKAIHVATGDYTTFVVSEDGD 331
G + TWGWG+YG LGH + P V+ ++ V G + T+V + + D
Sbjct: 320 GELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYAMERD 375
Score = 63 (27.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
A+ + G T VV+ G++Y++G G+ LGH
Sbjct: 303 AVMASCGSRHTAVVTRTGELYTWGWGKYGQLGH 335
Score = 57 (25.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
G + FG FG+A V SP+ + + +I V A G +TA+++R GRV
Sbjct: 7 GAWFGFGFCGFGQALGSGNSHHSVYSPEPLHASDDICQVSA--GWSYTALVTRGGRV 61
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 135 (52.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 43/142 (30%), Positives = 65/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 88 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 147
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++D G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 148 TAALTDDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVML 204
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 205 TADGDLYTLGCGEQGQLGRVPE 226
Score = 133 (51.9 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 53/175 (30%), Positives = 78/175 (44%)
Query: 39 ACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
A RR H T G+V + G GQLG G E R +P
Sbjct: 29 AASRRVPGARSCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVME-RKKPALVSIPEDVV 87
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
T+ +S +GQVY+FG + G + V+G+++V P VE + VVQ +
Sbjct: 88 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSA 143
Query: 157 GNFFTAVLSREGRVYTFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G+ TA L+ +GRV F WG N+ +G EP P+ L+ +PVV++
Sbjct: 144 GDSHTAALTDDGRV--FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-VPVVKV 194
Score = 69 (29.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 28/84 (33%), Positives = 33/84 (39%)
Query: 277 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 320
DG + T G G G LG G + E VPK V + HV G
Sbjct: 207 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 266
Query: 321 YTTFVVSEDGDVYSFGCGESASLG 344
Y TF +S +G VY FG LG
Sbjct: 267 YFTFAISHEGHVYGFGLSNYHQLG 290
Score = 68 (29.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 277 DGRVCTWGWGRYGCLGH-GNEECESVPKVVQALNDVKA-IHVATGDYTTFVVSEDGDVYS 334
+G V +G Y LG G E C + N K+ + + G + T + +G YS
Sbjct: 275 EGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS 334
Query: 335 FGCGESASLG 344
G E LG
Sbjct: 335 LGRAEYGRLG 344
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 133 (51.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 42/127 (33%), Positives = 58/127 (45%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G GHS VT G ++ G N GQLG G TEE R + L T+++
Sbjct: 57 GGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIML 116
Query: 111 SDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQV + G ++FG+ GV G + PQ +E L+ V AA G + G
Sbjct: 117 TEKGQVLSCGSNAFGQL--GVPHGPRKCVVPQAIECLREKVVCVAA-GLRHALATTATGS 173
Query: 170 VYTFSWG 176
V F WG
Sbjct: 174 V--FQWG 178
Score = 103 (41.3 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 32/126 (25%), Positives = 63/126 (50%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXX-XXXXXXXXXXTMLISDA 113
S V++ V++++G+NS GQLG G E+ + P+ + + +++D
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDG 67
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G ++ G + G+ G+ T+ V + + L+ + Q A G FT +L+ +G+V
Sbjct: 68 GDLFVCGLNKDGQL--GLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQV--L 123
Query: 174 SWGNDA 179
S G++A
Sbjct: 124 SCGSNA 129
Score = 91 (37.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 38/165 (23%), Positives = 76/165 (46%)
Query: 41 CRRENSQAIA-GPGHSIAVTSKGVVYSFGSN--SSGQ-LGHGT------TEEEWRPRPIR 90
C RE +A G H++A T+ G V+ +G+ SSG+ L G T +E P +
Sbjct: 150 CLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKE--PSRVT 207
Query: 91 SLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF 150
L + ++D G++Y +G++ G+ + PQ +E+ + F
Sbjct: 208 GLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQL---ASRAVFLPLPQRIEA--HYF 262
Query: 151 VVQ--AAIGNFFTAVLSRE--GRVYTFSWGNDARLGHHTEPNDVE 191
+ A+ + +T ++++ G+V+T+ + +LG EP + +
Sbjct: 263 QDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQ 307
Score = 88 (36.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 46/163 (28%), Positives = 65/163 (39%)
Query: 25 GSWKLVLRFLLAG--EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG--HGTT 80
G + VLRF + C R Q G +I +T KG V S GSN+ GQLG HG
Sbjct: 84 GHTEEVLRFTICKPLRGCPIR---QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR 140
Query: 81 EEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL---V 137
+ P+ I L + + G V+ +G G L +
Sbjct: 141 KCVV-PQAIECLREKVVCVAAGLRHA-LATTATGSVFQWGTGLASSGRRLCPGQNLPLFL 198
Query: 138 TS--PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGND 178
T+ P V L+N V A G+ +A L+ G +Y WG +
Sbjct: 199 TAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYV--WGRN 239
Score = 82 (33.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 276 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ G+V + G +G LG HG +C VP+ ++ L + K + VA G + G V+
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTATGSVF 175
Query: 334 SFGCGESASLGHNAIADGQVCSLLFLS 360
+G G AS G + GQ L FL+
Sbjct: 176 QWGTG-LASSGRR-LCPGQNLPL-FLT 199
Score = 74 (31.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQAL 308
+ C+WGW +G G G E P VQAL
Sbjct: 352 KCCSWGWNEHGMCGDGTESNVWTPTPVQAL 381
Score = 53 (23.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQ 306
+ G+V TWG YG LG E E+ V Q
Sbjct: 282 ETGKVFTWGRADYGQLGRRLEPPEAQKPVEQ 312
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 164 (62.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
+ G HS+A+ + G ++++G N+ GQ+G G+T + PR + + L
Sbjct: 132 EVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQT 191
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+M + D+G+VY +G + G+ G G +L +P V +L + V Q G T L+
Sbjct: 192 SSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--TPVRVAALHGVCVNQIVCGYAHTLALT 249
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG +Y + +LG ++ N + P ++ +E V++I
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQIM--VEKERVIEI 289
Score = 137 (53.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 44/172 (25%), Positives = 74/172 (43%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI-RSLXXX 95
EA C + G G H + T GVVY++G N QLG+GTT + P + +L
Sbjct: 69 EALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVK 128
Query: 96 XXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+M ++ G+++A+G ++ G+ G + T ++ L VV A
Sbjct: 129 QVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ-PTPRKVTNCLHTKKVVNIA 187
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G + + G VY + + + +LG N + P + L + V QI
Sbjct: 188 CGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTP-VRVAALHGVCVNQI 238
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/138 (26%), Positives = 63/138 (45%)
Query: 40 CCRRENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXX 98
C + IA G S+AV G VY +G N +GQLG G + P + +L
Sbjct: 177 CLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVN 236
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
T+ ++D G +YA+G +++G+ G + L++ Q++ + + + A
Sbjct: 237 QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNN-LLSPTQIMVEKERVIEIAACHST 295
Query: 159 FFTAVLSREGRVYTFSWG 176
+A ++ G VY WG
Sbjct: 296 HTSAAKTQGGHVYM--WG 311
Score = 71 (30.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT--GDYTTFVVSEDGDVYS 334
+G + WG YG LG G++ P + + + I +A +T+ ++ G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKE-RVIEIAACHSTHTSAAKTQGGHVYM 309
Query: 335 FG-C-GESASLGH 345
+G C G+S L H
Sbjct: 310 WGQCRGQSVILPH 322
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 146 (56.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 39/137 (28%), Positives = 65/137 (47%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS+ ++ KG VY+ G G+LGHG + PR + L T+++++
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTED 247
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 171
G VY FG + F + + P+ +++ LK ++ A G F T + +RE VY
Sbjct: 248 GCVYTFGLNIFHQLGI-IPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VY 305
Query: 172 TFSWGNDARLGHHTEPN 188
T N +LGH +P+
Sbjct: 306 TLGL-NGGQLGHLLDPS 321
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 300
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VP++V+ L+ VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 125 (49.1 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 39/128 (30%), Positives = 57/128 (44%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIR--SLXXXXXXXXXXXXXXTMLISDAGQVYAFGK 121
VY++G N++ LGHG+ + P + S ++ +S GQVY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G +G + T LV P+LVE L Q A T VL+ +G VYTF +L
Sbjct: 204 GPGGRLGHGDEQTCLV--PRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 182 GHHTEPND 189
G P++
Sbjct: 262 GIIPPPSN 269
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 168
+D VY +G ++ +G Q +K P+LV+ S +++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKG 196
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 71 (30.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 289 GCLGH----GNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 339
G LGH E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTARGDIYLLADYQCKK 371
Query: 340 SAS 342
AS
Sbjct: 372 LAS 374
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 171 (65.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 47/162 (29%), Positives = 74/162 (45%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+Q G H+I +T G VYS+G++ GQLG G + P + +L
Sbjct: 859 TQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGST 918
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+++ + +V FG G A + +V+ P LV SLK + + + G++ TA ++
Sbjct: 919 HCAVLTTSKEVLVFGN---GAA---MGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAIT 972
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
G VYT WG LGH + P L+ L N + QI
Sbjct: 973 ECGDVYT--WGTGQELGHGGNSTETSPK-LIEALRNQSIRQI 1011
Score = 159 (61.0 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 66/307 (21%), Positives = 126/307 (41%)
Query: 46 SQAIAGPGHSIAV---TSKGVVYSFGSNSSGQLGHGTT-EEEWRPRPIR--SLXXXXXXX 99
S +++ H A+ TS+G++ ++GS S+ +LG T +++ +P P R +
Sbjct: 695 SPSLSSTAHRSAIHLDTSRGLM-TWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICS 753
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF-VVQAAIGN 158
+ ++++ G VY +G+ + + G + L L+++ VV +IG
Sbjct: 754 ISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGF 813
Query: 159 FFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXX 218
A + G + T+ G + +LGH N +EP ++ +L + + Q+
Sbjct: 814 CHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPK-IIQSLTSFWITQVQCGEKHTICLT 872
Query: 219 XQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDG 278
+G VYS T P + + N+ ++
Sbjct: 873 K--NGK-VYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKE- 928
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCG 338
V +G G G S+P +V +L + + G Y+T ++E GDVY++G G
Sbjct: 929 -VLVFGNGA----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTG 983
Query: 339 ESASLGH 345
+ LGH
Sbjct: 984 QE--LGH 988
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 152 (58.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+V +WG GR+G LGHG E E P+V++AL + VA G + + VSE GD+Y +G
Sbjct: 183 GQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGW 242
Query: 338 GESASL 343
ES L
Sbjct: 243 NESGQL 248
Score = 118 (46.6 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ + + G V+S+G GQLGHGT E E PR + +L ++ +
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCV 231
Query: 111 SDAGQVYAFGKDSFGE 126
S+ G +Y +G + G+
Sbjct: 232 SETGDIYIWGWNESGQ 247
Score = 109 (43.4 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 40/138 (28%), Positives = 59/138 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
++ AG HS+ V+ G +Y +G N SGQL P RSL
Sbjct: 219 AEVAAGGWHSVCVSETGDIYIWGWNESGQLA----------LPARSLAEDGKTITGDAPG 268
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
S+A + G+D VQ P L++ V+A+ G+ TAV++
Sbjct: 269 LNEDGSEAKRATE-GEDGGPTPFIAVQ-----PFPALLDLPLGSDAVKASCGSRHTAVVT 322
Query: 166 REGRVYTFSWGNDARLGH 183
R G +YT+ WG +LGH
Sbjct: 323 RTGELYTWGWGKYGQLGH 340
Score = 94 (38.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 18/74 (24%), Positives = 40/74 (54%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+L+ AGQV+++G G+ +G + P+++E+L+ + + + A G + + +S
Sbjct: 177 LLLDAAGQVFSWGGGRHGQLGHGTLEAE--REPRVLEALQGLPMAEVAAGGWHSVCVSET 234
Query: 168 GRVYTFSWGNDARL 181
G +Y + W +L
Sbjct: 235 GDIYIWGWNESGQL 248
Score = 83 (34.3 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT---GDYTTFV 325
G + TWGWG+YG LGH + P V+ D K + V T G + T+V
Sbjct: 325 GELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVD-KQLQVRTVSCGPWNTYV 374
Score = 64 (27.6 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 313 AIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
A+ + G T VV+ G++Y++G G+ LGH
Sbjct: 308 AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 340
Score = 48 (22.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-KNIFVVQAAIGNFFTAVLSREGRV 170
G + FG FG+A +G + V SP+ +E ++ V + + +TA ++R GR+
Sbjct: 7 GAWFGFGFCGFGQALGSGRGRQ-VYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRL 63
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 146 (56.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 39/137 (28%), Positives = 65/137 (47%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
HS+ ++ KG VY+ G G+LGHG + PR + L T+++++
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTED 247
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES--LKNIFVVQAAIGNFFTAVLSREGRVY 171
G VY FG + F + + P+ +++ LK ++ A G F T + +RE VY
Sbjct: 248 GCVYTFGLNIFHQLGL-IPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VY 305
Query: 172 TFSWGNDARLGHHTEPN 188
T N +LG+ +PN
Sbjct: 306 TMGL-NGGQLGYLLDPN 321
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 300
S+ + HP L++ F + Q G+V T G G G LGHG+E+
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VP++V+ L+ VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Score = 124 (48.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 64 VYSFGSNSSGQLGHGTTEEEWRPRPIR--SLXXXXXXXXXXXXXXTMLISDAGQVYAFGK 121
VY++G N++ LGHG+ + P + S ++ +S GQVY G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
G +G + T LV P+LVE L Q A T VL+ +G VYTF +L
Sbjct: 204 GPGGRLGHGDEQTCLV--PRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 182 G 182
G
Sbjct: 262 G 262
Score = 103 (41.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE--SLKNIFVVQAAIGNFFTAVLSREG 168
+D VY +G ++ +G Q +K P+LV+ S I++ Q + F + LS++G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSK--HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKG 196
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
+VYT G RLGH E + P + G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEG 225
Score = 70 (29.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 286 GRYGCLGHGN-EECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVY---SFGCGE 339
G+ G L N E+C + P+ V AL+ D+ VA D T V+ GD+Y + C +
Sbjct: 312 GQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLADYQCKK 371
Query: 340 SAS 342
AS
Sbjct: 372 LAS 374
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 120 (47.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 42/144 (29%), Positives = 66/144 (45%)
Query: 35 LAGEACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLX 93
L + C+ ++ ++IAG G HS +T G ++ G N +GQLG TE+ +L
Sbjct: 21 LLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALS 80
Query: 94 XXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVV 152
T+++ AG V + G ++FG+ + G L+ PQ ++SLK V
Sbjct: 81 GFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLI--PQKIKSLKEKAVG 138
Query: 153 QAAIGNFFTAVLSREGRVYTFSWG 176
AA G + G V F WG
Sbjct: 139 IAA-GLRHALAATESGLV--FQWG 159
Score = 90 (36.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 68 GSNSSGQLGHGTTEEEWRPRPIR--SLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFG 125
G+NS GQLG G E+ P+ ++ S + +I+ AG+++ G + G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 126 EAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDA 179
+ G+ T+ V L +L V + A G FT +L R G V S G++A
Sbjct: 61 QL--GLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLV--LSCGSNA 110
Score = 84 (34.6 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 278 GRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G C +WGW +G G G E VPK V+AL K I + G
Sbjct: 331 GDCCLSWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCG 373
Score = 48 (22.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 276 QDGRVCTWGWGRYGCLG 292
+ G+V TWG YG LG
Sbjct: 264 ETGKVFTWGRADYGQLG 280
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 43/142 (30%), Positives = 65/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 71 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++D G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTDDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 188 TADGDLYTLGCGEQGQLGRVPE 209
Score = 132 (51.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 50/160 (31%), Positives = 75/160 (46%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
H T G+V + G GQLG G E R +P T+ +S +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVME-RKKPALVSIPEDVVQAEAGGMHTVCLSKS 85
Query: 114 GQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTDDGRV- 140
Query: 172 TFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
F WG N+ +G EP P+ L+ +PVV++
Sbjct: 141 -FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-VPVVKV 177
Score = 64 (27.6 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 26/76 (34%), Positives = 31/76 (40%)
Query: 277 DGRVCTWGWGRYGCLGH---------GNEECES--VPKVVQALNDVKAIHVA-----TGD 320
DG + T G G G LG G + E VPK V + HV G
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 249
Query: 321 YTTFVVSEDGDVYSFG 336
Y TF +S +G VY FG
Sbjct: 250 YFTFAISHEGHVYGFG 265
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 146 (56.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 46/161 (28%), Positives = 76/161 (47%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX----XXXXXXXXX 106
G HS+AV + G ++++G NSSGQLG G+T P+ I
Sbjct: 457 GTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAH 516
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFV---VQAAIGNFFTA 162
++ + G ++++G ++FG+ G GT T+P Q+V F V A G F+
Sbjct: 517 SLGLKADGTLWSWGDNTFGQLGDGT-GTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSL 575
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
L +G ++T WG+++ L T+P + P T N+P
Sbjct: 576 ALQADGTIWT--WGDNSLLQLGTDPAMLTP----ATQRNVP 610
Score = 135 (52.6 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 44/147 (29%), Positives = 73/147 (49%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG H++A+ + G ++++G+N +GQLG G T P P++ ++
Sbjct: 196 AGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVA 255
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQ--GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ G ++++G++ FGE GV G VT+P V + + +V AA G T L R
Sbjct: 256 LKADGSLWSWGQNLFGELGNGVALPGAN-VTTPTRVGTGSD-WVAIAA-GALHTVALHRN 312
Query: 168 GRVYTFSWGNDAR--LGHHTEPNDVEP 192
G V +WGN+A+ +G T N P
Sbjct: 313 GTVS--AWGNNAQGAVGDGTVANRSTP 337
Score = 116 (45.9 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G S+ + S G ++++G N+SGQLG GTT P P+ +
Sbjct: 406 GGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVR 465
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV------- 163
+D G ++A+G +S G+ G+ T ++PQ + ++ N A+ GN +TAV
Sbjct: 466 AD-GTLWAWGDNSSGQL--GIGSTVAASTPQQI-TVTN----PASAGNDWTAVAGGGAHS 517
Query: 164 --LSREGRVYTFSWGNDA--RLGHHT 185
L +G ++ SWG++ +LG T
Sbjct: 518 LGLKADGTLW--SWGDNTFGQLGDGT 541
Score = 106 (42.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 37/155 (23%), Positives = 68/155 (43%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXXXTM 108
AG H++A+ G V ++G+N+ G +G GT P I + + +
Sbjct: 301 AGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSF 360
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+ +G + G+ G G VT+P ++ + + ++ G F+ L G
Sbjct: 361 SVLANGTVFGWGGNGAGQLGNGTFGA--VTAPTVLSAGASAWL-GVEPGGAFSLGLRSNG 417
Query: 169 RVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLEN 201
++ +WG +A +LG T P P++G N
Sbjct: 418 TLW--AWGGNASGQLGDGTTTPSAIPVPVVGGAGN 450
Score = 101 (40.6 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG H + + S G +++ GSN GQLG GT R P++ ++
Sbjct: 39 AGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGIN--RTSPVQ--VPGTWKTVAAGTTHSLG 94
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIFVVQAAIGNFFTAVLSR 166
I G ++A+G + FG+ + +L T SP + + N +V +A G + L
Sbjct: 95 IKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT-GNDWVAVSA-GELTSFGLKG 152
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEP 192
+G ++ SWGN+ LG T + +P
Sbjct: 153 DGTLW--SWGNNLFGELGDGTTVSRPQP 178
Score = 83 (34.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYS 334
++G V WG G +G G S P ++ A + V + +A G +F V +G V+
Sbjct: 311 RNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFG 370
Query: 335 FGCGESASLGHNAIADGQVCSLLFLS 360
+G + LG+ G V + LS
Sbjct: 371 WGGNGAGQLGNGTF--GAVTAPTVLS 394
Score = 73 (30.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYS 334
DG + WG G LG+G P VQ +N V + +A G + DG +++
Sbjct: 643 DGTLWAWGANSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGTSHSLAGRSDGTLWA 700
Query: 335 FGCGESASLG 344
+G S LG
Sbjct: 701 WGNNTSGQLG 710
Score = 70 (29.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+G + WG G LG G ++P VV + + ATG + V DG ++++
Sbjct: 416 NGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRT--TATGTAHSVAVRADGTLWAW 473
Query: 336 GCGESASLG 344
G S LG
Sbjct: 474 GDNSSGQLG 482
Score = 69 (29.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH----VATGDYTTFVVSEDGDV 332
DG + WG G LG G+ S P+ + N A + VA G + + DG +
Sbjct: 467 DGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTL 526
Query: 333 YSFGCGESASLG 344
+S+G LG
Sbjct: 527 WSWGDNTFGQLG 538
Score = 63 (27.2 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALN----DVKAIHVATGDYTTFVVSEDGD 331
DG + +WG +G LG G + P + N D + VA G + + DG
Sbjct: 523 DGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGT 582
Query: 332 VYSFGCGESASLG 344
++++G LG
Sbjct: 583 IWTWGDNSLLQLG 595
Score = 62 (26.9 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 28/119 (23%), Positives = 47/119 (39%)
Query: 255 QLLNLQ--PXXXXXXXXXXXXXGQ-DGRVCTWGWGRYGCLGHG---------NEECESVP 302
Q++N + P G+ DG + WG G LG G N + +VP
Sbjct: 670 QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVP 729
Query: 303 KVVQALNDVKAIH---VAT-GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+ N V A VAT G + + +G ++++G S LG+ + + + L
Sbjct: 730 ARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTAL 788
Score = 57 (25.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+G V WG G LG+G + P V+ A + V G + + +G ++++G
Sbjct: 365 NGTVFGWGGNGAGQLGNGTFGAVTAPTVLSA-GASAWLGVEPGGAFSLGLRSNGTLWAWG 423
Query: 337 CGESASLG 344
S LG
Sbjct: 424 GNASGQLG 431
Score = 42 (19.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWL 369
D +VA G++ T + S D ++ S +L N++A G + F+++ Y +I L
Sbjct: 1090 DGNGTYVAVGEFGTILTSTDSVNWTVRTFGSVNL--NSVAYGG--NHTFVAVGSYGRILL 1145
Query: 370 N 370
+
Sbjct: 1146 S 1146
Score = 39 (18.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 316 VATGDYTTFVVSEDG 330
VA GD+ V S DG
Sbjct: 1272 VAAGDFGQIVTSTDG 1286
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 146 (56.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 46/161 (28%), Positives = 76/161 (47%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX----XXXXXXXXX 106
G HS+AV + G ++++G NSSGQLG G+T P+ I
Sbjct: 457 GTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAH 516
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFV---VQAAIGNFFTA 162
++ + G ++++G ++FG+ G GT T+P Q+V F V A G F+
Sbjct: 517 SLGLKADGTLWSWGDNTFGQLGDGT-GTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSL 575
Query: 163 VLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIP 203
L +G ++T WG+++ L T+P + P T N+P
Sbjct: 576 ALQADGTIWT--WGDNSLLQLGTDPAMLTP----ATQRNVP 610
Score = 135 (52.6 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 44/147 (29%), Positives = 73/147 (49%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG H++A+ + G ++++G+N +GQLG G T P P++ ++
Sbjct: 196 AGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVA 255
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQ--GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+ G ++++G++ FGE GV G VT+P V + + +V AA G T L R
Sbjct: 256 LKADGSLWSWGQNLFGELGNGVALPGAN-VTTPTRVGTGSD-WVAIAA-GALHTVALHRN 312
Query: 168 GRVYTFSWGNDAR--LGHHTEPNDVEP 192
G V +WGN+A+ +G T N P
Sbjct: 313 GTVS--AWGNNAQGAVGDGTVANRSTP 337
Score = 116 (45.9 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G S+ + S G ++++G N+SGQLG GTT P P+ +
Sbjct: 406 GGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVR 465
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAV------- 163
+D G ++A+G +S G+ G+ T ++PQ + ++ N A+ GN +TAV
Sbjct: 466 AD-GTLWAWGDNSSGQL--GIGSTVAASTPQQI-TVTN----PASAGNDWTAVAGGGAHS 517
Query: 164 --LSREGRVYTFSWGNDA--RLGHHT 185
L +G ++ SWG++ +LG T
Sbjct: 518 LGLKADGTLW--SWGDNTFGQLGDGT 541
Score = 106 (42.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 37/155 (23%), Positives = 68/155 (43%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXXXTM 108
AG H++A+ G V ++G+N+ G +G GT P I + + +
Sbjct: 301 AGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSF 360
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G V+ +G + G+ G G VT+P ++ + + ++ G F+ L G
Sbjct: 361 SVLANGTVFGWGGNGAGQLGNGTFGA--VTAPTVLSAGASAWL-GVEPGGAFSLGLRSNG 417
Query: 169 RVYTFSWGNDA--RLGHHTEPNDVEPHPLLGTLEN 201
++ +WG +A +LG T P P++G N
Sbjct: 418 TLW--AWGGNASGQLGDGTTTPSAIPVPVVGGAGN 450
Score = 101 (40.6 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG H + + S G +++ GSN GQLG GT R P++ ++
Sbjct: 39 AGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGIN--RTSPVQ--VPGTWKTVAAGTTHSLG 94
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVT---SPQLVESLKNIFVVQAAIGNFFTAVLSR 166
I G ++A+G + FG+ + +L T SP + + N +V +A G + L
Sbjct: 95 IKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT-GNDWVAVSA-GELTSFGLKG 152
Query: 167 EGRVYTFSWGND--ARLGHHTEPNDVEP 192
+G ++ SWGN+ LG T + +P
Sbjct: 153 DGTLW--SWGNNLFGELGDGTTVSRPQP 178
Score = 83 (34.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQA-LNDVKAIHVATGDYTTFVVSEDGDVYS 334
++G V WG G +G G S P ++ A + V + +A G +F V +G V+
Sbjct: 311 RNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFG 370
Query: 335 FGCGESASLGHNAIADGQVCSLLFLS 360
+G + LG+ G V + LS
Sbjct: 371 WGGNGAGQLGNGTF--GAVTAPTVLS 394
Score = 73 (30.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALN--DVKAIHVATGDYTTFVVSEDGDVYS 334
DG + WG G LG+G P VQ +N V + +A G + DG +++
Sbjct: 643 DGTLWAWGANSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGTSHSLAGRSDGTLWA 700
Query: 335 FGCGESASLG 344
+G S LG
Sbjct: 701 WGNNTSGQLG 710
Score = 70 (29.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVP-KVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+G + WG G LG G ++P VV + + ATG + V DG ++++
Sbjct: 416 NGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRT--TATGTAHSVAVRADGTLWAW 473
Query: 336 GCGESASLG 344
G S LG
Sbjct: 474 GDNSSGQLG 482
Score = 69 (29.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIH----VATGDYTTFVVSEDGDV 332
DG + WG G LG G+ S P+ + N A + VA G + + DG +
Sbjct: 467 DGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTL 526
Query: 333 YSFGCGESASLG 344
+S+G LG
Sbjct: 527 WSWGDNTFGQLG 538
Score = 63 (27.2 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALN----DVKAIHVATGDYTTFVVSEDGD 331
DG + +WG +G LG G + P + N D + VA G + + DG
Sbjct: 523 DGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGT 582
Query: 332 VYSFGCGESASLG 344
++++G LG
Sbjct: 583 IWTWGDNSLLQLG 595
Score = 62 (26.9 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 28/119 (23%), Positives = 47/119 (39%)
Query: 255 QLLNLQ--PXXXXXXXXXXXXXGQ-DGRVCTWGWGRYGCLGHG---------NEECESVP 302
Q++N + P G+ DG + WG G LG G N + +VP
Sbjct: 670 QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVP 729
Query: 303 KVVQALNDVKAIH---VAT-GDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+ N V A VAT G + + +G ++++G S LG+ + + + L
Sbjct: 730 ARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTAL 788
Score = 57 (25.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+G V WG G LG+G + P V+ A + V G + + +G ++++G
Sbjct: 365 NGTVFGWGGNGAGQLGNGTFGAVTAPTVLSA-GASAWLGVEPGGAFSLGLRSNGTLWAWG 423
Query: 337 CGESASLG 344
S LG
Sbjct: 424 GNASGQLG 431
Score = 42 (19.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWL 369
D +VA G++ T + S D ++ S +L N++A G + F+++ Y +I L
Sbjct: 1090 DGNGTYVAVGEFGTILTSTDSVNWTVRTFGSVNL--NSVAYGG--NHTFVAVGSYGRILL 1145
Query: 370 N 370
+
Sbjct: 1146 S 1146
Score = 39 (18.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 316 VATGDYTTFVVSEDG 330
VA GD+ V S DG
Sbjct: 1272 VAAGDFGQIVTSTDG 1286
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 114 (45.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G+ G LGHG+ P V+ L+ + IH+ G Y + ++ VYS+G
Sbjct: 522 VWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 581
Query: 340 SASLGHN 346
LGH+
Sbjct: 582 FGQLGHS 588
Score = 105 (42.0 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 37/122 (30%), Positives = 52/122 (42%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-------SLXXXXXXXXXXX 103
G HS AVT GVVY +G NS+GQ + P P+ L
Sbjct: 99 GSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACG 158
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTA 162
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F +
Sbjct: 159 EEHTLALSISREIWAWGTG----CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSL 214
Query: 163 VL 164
L
Sbjct: 215 AL 216
Score = 89 (36.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 36/144 (25%), Positives = 60/144 (41%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PI--RSLXXXXXXXXXXX 103
QA G H + +T G VYSFG+ L + E P PI +L
Sbjct: 45 QAALGVKHGVLLTEDGEVYSFGT-----LPWRSEPAELCPSSPILENALVGQYVVTVATG 99
Query: 104 XXXTMLISDAGQVYAFGKDSFGEA-----EYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
+ ++++G VY +G++S G+ +Y + + S L + ++Q A G
Sbjct: 100 SFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGE 159
Query: 159 FFTAVLSREGRVYTFSWGNDARLG 182
T LS ++ +WG +LG
Sbjct: 160 EHTLALSISREIW--AWGTGCQLG 181
Score = 82 (33.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLV-TSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
+L+++ G+VY SFG + + +L +SP L +L +VV A G+F + ++
Sbjct: 54 VLLTEDGEVY-----SFGTLPWRSEPAELCPSSPILENALVGQYVVTVATGSFHSGAVTE 108
Query: 167 EGRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 207
G VY WG ++ G N EP+P+ + E P++ +
Sbjct: 109 SGVVYM--WGENSA-GQCAVANQQYVPEPNPVSISDSETSPLLAV 150
Score = 66 (28.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV-SED 329
+V +WG +G LGH + +VP++ + ++ VA G DY+ F+V +ED
Sbjct: 573 QVYSWGSNTFGQLGHSDFPT-TVPRLAKMNSENGVWSVAAGQDYSLFLVDTED 624
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 146 (56.5 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 42/146 (28%), Positives = 65/146 (44%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIRSLXXXXXXX------ 99
Q G H +A++ +G++ ++G N GQLG G T E + PR I +
Sbjct: 170 QVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKI 229
Query: 100 --XXXXXXXTMLISDAGQVYAFGKDSFGEAEY-GVQGTKLVTSPQLVESLKNIFVVQAAI 156
T +SDAG+VY +G S G+ + +Q P+ V L + + + A
Sbjct: 230 MQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVAC 289
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG 182
G T LS EG +Y + G +LG
Sbjct: 290 GGVHTCALSLEGALYAWGGGQAGQLG 315
Score = 117 (46.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 28/86 (32%), Positives = 48/86 (55%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESV--PKVVQA----LND----VKAIHVATGDYTTFV 325
++G + WG+ G LG G CE + P+V+ A L++ VK + ++ G+Y T
Sbjct: 183 EEGLLQAWGYNEQGQLGRG-VTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAA 241
Query: 326 VSEDGDVYSFGCGESASLGHNAIADG 351
+S+ G+VY++G G LGH ++ G
Sbjct: 242 LSDAGEVYTWGLGSMGQLGHVSLQSG 267
Score = 110 (43.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 42/141 (29%), Positives = 60/141 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTE---EEWRPRPIRSLXXXXXXXXXXX 103
Q G H+ A++ G VY++G S GQLGH + + +E PR + L
Sbjct: 231 QLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACG 290
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQ-------AA 155
T +S G +YA+G G+ G Q G S L+N+ V+ A
Sbjct: 291 GVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVA 350
Query: 156 IGNFFTAVLSREGRVYTFSWG 176
G+ T V REGR+ WG
Sbjct: 351 CGHSHTLVYMREGRIC--GWG 369
Score = 106 (42.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEEC---ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS 334
G V TWG G G LGH + + E +P+ V L+ V VA G T +S +G +Y+
Sbjct: 246 GEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYA 305
Query: 335 FGCGESASLG 344
+G G++ LG
Sbjct: 306 WGGGQAGQLG 315
Score = 88 (36.0 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 30/135 (22%), Positives = 53/135 (39%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H+ AV S G ++++G+N GQLG GT P+ ++ L T I
Sbjct: 69 GREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAI 128
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESL--KNIFVVQAAIGNFFTAVLSRE 167
++ + + + V G ++ P+L + Q + G LS E
Sbjct: 129 AEPRE----NDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEE 184
Query: 168 GRVYTFSWGNDARLG 182
G + + + +LG
Sbjct: 185 GLLQAWGYNEQGQLG 199
Score = 87 (35.7 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 36/140 (25%), Positives = 64/140 (45%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR-PRPIR-SLXXXXXXXXXX------XXXX 106
S+++ +K +Y +G N SGQ G E+ R P+ + L
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T ++ G ++A+G + +G+ G + G K P+ V+ L++ FV + G F TA ++
Sbjct: 73 TAAVASDGSLFAWGANEYGQLGDGTEVGRK---HPKKVKQLQSEFVKFVSCGAFCTAAIA 129
Query: 166 --RE--GRVYT---FSWGND 178
RE G + T + WG +
Sbjct: 130 EPRENDGTLSTSRLWVWGQN 149
Score = 55 (24.4 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 276 QDGRVCTWGWGRYG 289
++GR+C WG+ YG
Sbjct: 361 REGRICGWGYNSYG 374
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSP-QLVESL------KNIFVVQAAIGNFFTAVLSREG 168
+Y +G + G+ Q KL+ P QL L N + + G TA ++ +G
Sbjct: 22 IYVWGYNQSGQTGRNEQ-EKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDG 80
Query: 169 RVYTFSWG-ND-ARLGHHTEPNDVEP 192
+ F+WG N+ +LG TE P
Sbjct: 81 SL--FAWGANEYGQLGDGTEVGRKHP 104
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 125 (49.1 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 50 AGPG--HSIAVTSKGVVYSFGSNSSGQLGHGTTEE-EWRPRPIRSLXXXXXXXXXXXXXX 106
+GP H+I + FG N SGQLG + +P I +L
Sbjct: 121 SGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHH 180
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
T+ ++D G VYA G++ G+ GV T + SP + + + +++ G F+ +L
Sbjct: 181 TLFLTDTGTVYACGENKSGQC--GVGNTHANIYSPTPI-NYRGPPIIRIGCGAEFSVILD 237
Query: 166 REGRVYTFSWGNDARLGHHTE 186
+G ++TF +LGH+T+
Sbjct: 238 IKGSLHTFGLPEYGQLGHNTD 258
Score = 103 (41.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T+LI+ + FG++ G+ Q KL P ++ +L+ + +VQAA+G T L+
Sbjct: 128 TILINMDRKALGFGRNPSGQLGLS-QDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTD 186
Query: 167 EGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENIPVVQI 207
G VY + G +T N P P+ P+++I
Sbjct: 187 TGTVYACGENKSGQCGVGNTHANIYSPTPI--NYRGPPIIRI 226
Score = 99 (39.9 bits), Expect = 7.4e-08, Sum P(3) = 7.4e-08
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE-WRPRPIRSLXXXXXXXXXXXXX 105
QA G H++ +T G VY+ G N SGQ G G T + P PI +
Sbjct: 173 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPI-NYRGPPIIRIGCGAE 231
Query: 106 XTMLISDAGQVYAFGKDSFGE------AEYGVQGTKLV----TSPQLV 143
++++ G ++ FG +G+ A+Y V KL TSP+ V
Sbjct: 232 FSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKV 279
Score = 79 (32.9 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVK--AIHVATGDYTTFVVSEDGDVYSFG 336
RV +WG+G +G LGH + E VP++++ + V G + +V+E G ++ FG
Sbjct: 317 RVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFG 376
Score = 77 (32.2 bits), Expect = 7.4e-08, Sum P(3) = 7.4e-08
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 143 VESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPND 189
V + + +V A GN T + + RVY++ +G RLGH EP D
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGH-AEPKD 336
Score = 58 (25.5 bits), Expect = 7.4e-08, Sum P(3) = 7.4e-08
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 277 DGRVCTWGWG-RYGCLGHGN-EECESVPKVVQALNDVKAIHVATG-DYTTFVV 326
D + WG +G LG G ++ +VPK V L+++K V G +T +V
Sbjct: 414 DDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLV 466
Score = 58 (25.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 305 VQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
V ++ V+ + A G+ T + VYS+G G LGH D V L+
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLM 343
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 115 (45.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G+ G LGHG+ P V+ L+ + IH+ G Y + ++ VYS+G
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 587
Query: 340 SASLGHN 346
LGH+
Sbjct: 588 FGQLGHS 594
Score = 101 (40.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 36/122 (29%), Positives = 51/122 (41%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-------SLXXXXXXXXXXX 103
G HS AVT GV Y +G NS+GQ + P P+ L
Sbjct: 99 GSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACG 158
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTA 162
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F +
Sbjct: 159 EEHTLALSISREIWAWGTG----CQLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSL 214
Query: 163 VL 164
L
Sbjct: 215 AL 216
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/146 (26%), Positives = 60/146 (41%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PI--RSLXXXXXXXXXXX 103
QA G H + +T G VYSFG+ L + E P PI +L
Sbjct: 45 QAALGVKHGVLLTEDGEVYSFGT-----LPWRSGPVEICPSSPILENALVGQYVVTVATG 99
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ---LVES----LKNIFVVQAAI 156
+ ++D G Y +G++S G+ V + V P + +S L + ++Q A
Sbjct: 100 SFHSGAVTDNGVAYMWGENSAGQC--AVANQQYVPEPNPVSIADSEASPLLAVRILQLAC 157
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG 182
G T LS ++ +WG +LG
Sbjct: 158 GEEHTLALSISREIW--AWGTGCQLG 181
Score = 72 (30.4 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+L+++ G+VY+FG + + +SP L +L +VV A G+F + ++
Sbjct: 54 VLLTEDGEVYSFGTLPWRSGPVEI----CPSSPILENALVGQYVVTVATGSFHSGAVTDN 109
Query: 168 GRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 207
G Y WG ++ G N EP+P+ + E P++ +
Sbjct: 110 GVAYM--WGENSA-GQCAVANQQYVPEPNPVSIADSEASPLLAV 150
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 115 (45.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G+ G LGHG+ P V+ L+ + IH+ G Y + ++ VYS+G
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 587
Query: 340 SASLGHN 346
LGH+
Sbjct: 588 FGQLGHS 594
Score = 101 (40.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 36/122 (29%), Positives = 51/122 (41%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-------SLXXXXXXXXXXX 103
G HS AVT GV Y +G NS+GQ + P P+ L
Sbjct: 99 GSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACG 158
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTA 162
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F +
Sbjct: 159 EEHTLALSISREIWAWGTG----CQLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSL 214
Query: 163 VL 164
L
Sbjct: 215 AL 216
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/146 (26%), Positives = 60/146 (41%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PI--RSLXXXXXXXXXXX 103
QA G H + +T G VYSFG+ L + E P PI +L
Sbjct: 45 QAALGVKHGVLLTEDGEVYSFGT-----LPWRSGPVEICPSSPILENALVGQYVITVATG 99
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQ---LVES----LKNIFVVQAAI 156
+ ++D G Y +G++S G+ V + V P + +S L + ++Q A
Sbjct: 100 SFHSGAVTDNGVAYMWGENSAGQC--AVANQQYVPEPNPVSIADSEASPLLAVRILQLAC 157
Query: 157 GNFFTAVLSREGRVYTFSWGNDARLG 182
G T LS ++ +WG +LG
Sbjct: 158 GEEHTLALSISREIW--AWGTGCQLG 181
Score = 71 (30.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+L+++ G+VY+FG + + +SP L +L +V+ A G+F + ++
Sbjct: 54 VLLTEDGEVYSFGTLPWRSGPVEI----CPSSPILENALVGQYVITVATGSFHSGAVTDN 109
Query: 168 GRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 207
G Y WG ++ G N EP+P+ + E P++ +
Sbjct: 110 GVAYM--WGENSA-GQCAVANQQYVPEPNPVSIADSEASPLLAV 150
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 148 (57.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+V +WG GR+G LGHG E E P++++AL ++ VA G + + +SE GD+Y +G
Sbjct: 178 GQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGW 237
Query: 338 GESASL 343
ES L
Sbjct: 238 NESGQL 243
Score = 117 (46.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ + + G V+S+G+ GQLGHGT E E PR + +L ++ +
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCL 226
Query: 111 SDAGQVYAFGKDSFGE 126
S+ G +Y +G + G+
Sbjct: 227 SETGDIYIWGWNESGQ 242
Score = 111 (44.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 38/138 (27%), Positives = 58/138 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
++ AG HS+ ++ G +Y +G N SGQL P +SL
Sbjct: 214 AEVAAGGWHSVCLSETGDIYIWGWNESGQLA----------LPTKSLAEDGKTTAGEASG 263
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
L D +V + S GE + P L++ V+ + G+ TAVL+
Sbjct: 264 ---LEEDGSEVK---RGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLT 317
Query: 166 REGRVYTFSWGNDARLGH 183
R G +YT+ WG +LGH
Sbjct: 318 RTGELYTWGWGKYGQLGH 335
Score = 103 (41.3 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+L+ AGQV+++G G+ +G + P+L+E+L+ + + + A G + + LS
Sbjct: 172 LLLDAAGQVFSWGAGRHGQLGHGTLEAE--PEPRLLEALQGLRMAEVAAGGWHSVCLSET 229
Query: 168 GRVYTFSWGNDARLGHHTE 186
G +Y + W +L T+
Sbjct: 230 GDIYIWGWNESGQLALPTK 248
Score = 83 (34.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT---GDYTTFV 325
G + TWGWG+YG LGH + P V+ D K + V T G + T+V
Sbjct: 320 GELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVD-KQLQVRTVSCGPWNTYV 369
Score = 66 (28.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 312 KAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+A+ V+ G T V++ G++Y++G G+ LGH
Sbjct: 302 EAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGH 335
Score = 44 (20.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREGRV 170
G + FG FG+A G + V SP+ + + ++ V + + +TA ++R GRV
Sbjct: 7 GTWFGFGFCGFGQALGSGLGRQ-VHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRV 63
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 139 (54.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 49/155 (31%), Positives = 65/155 (41%)
Query: 40 CCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXX 99
C R + G GHS VT G ++ G N GQLG G TE+ P +SL
Sbjct: 46 CKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQ 105
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGN 158
T+++++ GQV + G +SFG+ GV G + PQ +E K V AA G
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFGQL--GVPHGPRRCVVPQAIELHKEKVVCIAA-GL 162
Query: 159 FFTAVLSREGRVYTFSWGND-ARLGHHTEPNDVEP 192
+ G V F WG A G P P
Sbjct: 163 RHAVAATASGIV--FQWGTGLASCGRRLCPGQTLP 195
Score = 92 (37.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 31/132 (23%), Positives = 59/132 (44%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXX-XXXXXXXXXXXXTMLI 110
P S A + ++++G+NS GQLG G E+ P+ + + ++
Sbjct: 5 PSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVV 64
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D G ++ G + G+ G+ T+ + +SL + Q A G FT +L+ G+V
Sbjct: 65 TDGGDLFVCGLNKDGQL--GLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQV 122
Query: 171 YTFSWGNDARLG 182
+ + +LG
Sbjct: 123 LSCGSNSFGQLG 134
Score = 83 (34.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 276 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
++G+V + G +G LG HG C VP+ ++ L+ K + +A G + G V+
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVF 175
Query: 334 SFGCGESASLGHNAIADGQVCSLLF 358
+G G AS G + GQ L F
Sbjct: 176 QWGTG-LASCGRR-LCPGQTLPLFF 198
Score = 55 (24.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 278 GRVCTWGWGRYGCLGHGNEECE-SVPKVVQA--LNDVKAIHVATGDYTTFVV-SEDGDVY 333
G V WG ++G L NE VP+ ++A + K + +G +T V +E G ++
Sbjct: 231 GEVYVWGSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSG-WTHLVAQTETGKMF 287
Query: 334 SFGCGESASLG 344
++G + LG
Sbjct: 288 TWGRADYGQLG 298
Score = 53 (23.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 302 PKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLLFLSI 361
P V L + KA+ V G + +++ G+VY +G + L + A A V +
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEA-AFLPVPQKIEAHC 261
Query: 362 FQYLQIWLNLSSYRHL 377
FQ ++ S + HL
Sbjct: 262 FQNEKVTAIWSGWTHL 277
Score = 47 (21.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECE 299
+ G++ TWG YG LG E E
Sbjct: 282 ETGKMFTWGRADYGQLGRKLETYE 305
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 115 (45.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G+ G LGHG+ P V+ L+ + IH+ G Y + ++ VYS+G
Sbjct: 532 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 591
Query: 340 SASLGHN 346
LGH+
Sbjct: 592 FGQLGHS 598
Score = 98 (39.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 36/122 (29%), Positives = 51/122 (41%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-------SLXXXXXXXXXXX 103
G H+ AVT GVVY +G NS+GQ P P+ L
Sbjct: 104 GSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQLACG 163
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTA 162
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F +
Sbjct: 164 EEHTLALSLSREIWAWGTG----CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSL 219
Query: 163 VL 164
L
Sbjct: 220 AL 221
Score = 78 (32.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 31/101 (30%), Positives = 49/101 (48%)
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSREGR 169
SD G+VY SFG + + + S ++ES L +VV A G+F T ++ G
Sbjct: 63 SD-GEVY-----SFGTLPWRSEPAETCPSNPILESALVGQYVVTVATGSFHTGAVTDSGV 116
Query: 170 VYTFSWG-NDA-RLGHHTEPNDVEPHPL-LGTLENIPVVQI 207
VY WG N A + +P EP+P+ + E P++ +
Sbjct: 117 VYM--WGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAV 155
Score = 77 (32.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 38/148 (25%), Positives = 59/148 (39%)
Query: 48 AIAGPGHSIAVT-----SKGVVYSFGSNSSGQLGHGTTEEEWRP-RPI--RSLXXXXXXX 99
A G H + +T S G VYSFG+ L + E P PI +L
Sbjct: 46 AALGVKHGVLLTEVFKPSDGEVYSFGT-----LPWRSEPAETCPSNPILESALVGQYVVT 100
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAE-----YGVQGTKLVTSPQLVESLKNIFVVQA 154
T ++D+G VY +G++S G+ Y + + S L + ++Q
Sbjct: 101 VATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQL 160
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDARLG 182
A G T LS ++ +WG +LG
Sbjct: 161 ACGEEHTLALSLSREIW--AWGTGCQLG 186
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 125 (49.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 287 RYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG-- 344
R+G LGHG+ E E P++V+AL V VA G + + VS+ GD+Y +G ES LG
Sbjct: 9 RHGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLP 68
Query: 345 HNAIADGQ 352
A+A+ Q
Sbjct: 69 SRAVAEEQ 76
Score = 104 (41.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 278 GRVCTWGWGRYGCLGHGNE-ECESVPKVVQAL--NDVKAIHVATGDYTTFV-VSEDGD 331
G + TWGWG+YG LGHG+ C+ P+ V+ L ++A V G + T+V V + G+
Sbjct: 135 GELNTWGWGKYGQLGHGDRASCDH-PRRVEQLWAEGLRAQEVVCGPWNTYVCVLQQGE 191
Score = 85 (35.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 73 GQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGE 126
GQLGHG+ E E +PR + +L + +SD G +Y +G + G+
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQ 64
Score = 69 (29.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
P+LVE+L + + A G + +A +S G +Y + W +LG
Sbjct: 24 PRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 68 (29.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 140 PQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGH 183
P L++ V + G+ TA L+R G + T+ WG +LGH
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGH 150
Score = 65 (27.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 47 QAIAGPG-HSIAVTSKGVVYSFGSNSSGQLG 76
+A+A G HS V+ G +Y +G N SGQLG
Sbjct: 36 RAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 151 (58.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+V +WG GR+G LGHG+ E E P++++AL + VA G + + VSE GD+Y +G
Sbjct: 114 GQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGW 173
Query: 338 GESASL 343
ES L
Sbjct: 174 NESGQL 179
Score = 111 (44.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G H++ + G V+S+G GQLGHG+ E E PR + +L ++ +
Sbjct: 103 GAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCV 162
Query: 111 SDAGQVYAFGKDSFGE 126
S+ G +Y +G + G+
Sbjct: 163 SETGDIYIWGWNESGQ 178
Score = 108 (43.1 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 40/138 (28%), Positives = 58/138 (42%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
++ AG HS+ V+ G +Y +G N SGQL P RSL
Sbjct: 150 AEVAAGGWHSVCVSETGDIYIWGWNESGQLA----------LPSRSLAEDTKTIPREASG 199
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
L D +V K GE + P L++ VV+A+ G+ TAV++
Sbjct: 200 ---LNEDGFEVRRTAK---GEDGAPAPFIAIQPFPALLDLPLGADVVKASCGSRHTAVVT 253
Query: 166 REGRVYTFSWGNDARLGH 183
G +YT+ WG +LGH
Sbjct: 254 GTGELYTWGWGKYGQLGH 271
Score = 107 (42.7 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 20/74 (27%), Positives = 42/74 (56%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+L+ +AGQV+++G+ G+ +G + P+L+E+L+ + V + A G + + +S
Sbjct: 108 LLLDEAGQVFSWGQGRHGQLGHG--SLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSET 165
Query: 168 GRVYTFSWGNDARL 181
G +Y + W +L
Sbjct: 166 GDIYIWGWNESGQL 179
Score = 83 (34.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALND--VKAIHVATGDYTTFV--VSEDG 330
G + TWGWG+YG LGH + P V+ D ++ V+ G + T+V V ++G
Sbjct: 256 GELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSCGPWNTYVYAVEKEG 312
Score = 58 (25.5 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 314 IHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+ + G T VV+ G++Y++G G+ LGH
Sbjct: 240 VKASCGSRHTAVVTGTGELYTWGWGKYGQLGH 271
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 108 (43.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G+ G LGHG+ P V+ L+ + I++ G Y + ++ VYS+G
Sbjct: 527 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNT 586
Query: 340 SASLGH 345
LGH
Sbjct: 587 FGQLGH 592
Score = 104 (41.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-------SLXXXXXXXXXX 102
+G H+ AVT GV Y +G NS+GQ + P P+ SL
Sbjct: 98 SGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLAC 157
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFT 161
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F +
Sbjct: 158 GEEHTLALSISREIWAWGTG----CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHS 213
Query: 162 AVL 164
L
Sbjct: 214 LAL 216
Score = 88 (36.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 36/144 (25%), Positives = 59/144 (40%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PI--RSLXXXXXXXXXXX 103
QA G H + +T G VYSFG+ L + E P PI +L
Sbjct: 45 QAALGVKHGVLLTEDGEVYSFGT-----LPWRSEPAEICPSCPILENALIGQFVVTVASG 99
Query: 104 XXXTMLISDAGQVYAFGKDSFGEA-----EYGVQGTKLVTSPQLVESLKNIFVVQAAIGN 158
++++G Y +G++S G+ +Y + + S SL + ++Q A G
Sbjct: 100 SFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGE 159
Query: 159 FFTAVLSREGRVYTFSWGNDARLG 182
T LS ++ +WG +LG
Sbjct: 160 EHTLALSISREIW--AWGTGCQLG 181
Score = 70 (29.7 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAVLSR 166
+L+++ G+VY SFG + + ++ S P L +L FVV A G+F ++
Sbjct: 54 VLLTEDGEVY-----SFGTLPWRSEPAEICPSCPILENALIGQFVVTVASGSFHNGAVTE 108
Query: 167 EGRVYTFSWGNDARLGHHTEPNDV---EPHPL 195
G Y WG ++ G N EP+P+
Sbjct: 109 SGVAYM--WGENSA-GQCAVANQQYVPEPNPV 137
Score = 65 (27.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG-DYTTFVV-SED 329
+V +WG +G LGH + +VP++ + ++ VA G DY+ F+V +ED
Sbjct: 578 QVYSWGSNTFGQLGHYDFPT-TVPRLAKVSSENGVWSVAAGQDYSLFLVDTED 629
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 117 (46.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 37/128 (28%), Positives = 56/128 (43%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG HS+A G +YS+G +G+LG G + +P+ I+ L +
Sbjct: 446 AGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGC 505
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREG 168
I VY +G F + +G + P+LVE L N V + G F + L+ +G
Sbjct: 506 IDSNYNVYTWGNGKFYKLGHGNDDIDIYY-PKLVECLNHNKKVCMLSFGCFNSLALNVKG 564
Query: 169 RVYTFSWG 176
VY WG
Sbjct: 565 DVYV--WG 570
Score = 105 (42.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + +WG+G G LG GN + + P++++ L + + ++V G + + + +VY++G
Sbjct: 458 GDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGN 517
Query: 338 GESASLGH 345
G+ LGH
Sbjct: 518 GKFYKLGH 525
Score = 103 (41.3 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVAT-GDYTTFVVSEDGDVYSFG 336
V TWG G++ LGHGN++ + PK+V+ LN K + + + G + + ++ GDVY +G
Sbjct: 512 VYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 92 (37.4 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
G H++A+ + GV+YS+G N+ G +G+GT + + P PI
Sbjct: 357 GDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 90 (36.7 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G +Y++G G G+ K PQL++ L+N ++ G + + VYT
Sbjct: 458 GDIYSWGYG--GNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYT- 514
Query: 174 SWGNDA--RLGHHTEPNDV 190
WGN +LGH + D+
Sbjct: 515 -WGNGKFYKLGHGNDDIDI 532
Score = 77 (32.2 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVY 333
+ G+V T G+ + G LG+G + V LN K I +A G VS+ G VY
Sbjct: 769 ESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSDVGLVY 828
Query: 334 SFGCGESASLGHNAIAD 350
+G + + LG I D
Sbjct: 829 GWGKNDKSQLGIGVIKD 845
Score = 71 (30.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G +Y +G G+ GV T+ + P+ + + I+ + ++GN + L+ +
Sbjct: 903 ECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIY--KCSLGNSHSLFLTNTNEL 960
Query: 171 YTFSWGNDARLG 182
Y N+ RLG
Sbjct: 961 YVCGSNNNGRLG 972
Score = 63 (27.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 286 GRYGCLGHGNEECE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GR G C SVP V N++ + G+ + ++S DG +Y FG E
Sbjct: 969 GRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFIYIFG--EFIK- 1025
Query: 344 GHNAIADGQVCSLLFL 359
G N ++ C ++ L
Sbjct: 1026 GSNGNSNNMSCEVISL 1041
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 285 WGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
WG + + N +PK + +IH +T Y F ++ GD+ SFG
Sbjct: 569 WGTFNITNNYVNYYISKLPKQINTNYKCISIHAST--YVCFGITLVGDLISFG 619
Score = 53 (23.7 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
KN+ V+ + G+ + + G +Y++ +G + RLG
Sbjct: 438 KNV-VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLG 472
Score = 47 (21.6 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+N+V ++ G + E GD+Y +G ES +G + Q C LL
Sbjct: 884 VNNVNNVNGVNG-VNNYSSDECGDLYIWGNAESGKVGLG-VDYTQGCILL 931
Score = 41 (19.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGH 345
D+ + + E G VY+ G ++ LG+
Sbjct: 761 DHFSVFLLESGKVYTAGYNKNGELGN 786
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 117 (46.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 37/128 (28%), Positives = 56/128 (43%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTML 109
AG HS+A G +YS+G +G+LG G + +P+ I+ L +
Sbjct: 446 AGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGC 505
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-NIFVVQAAIGNFFTAVLSREG 168
I VY +G F + +G + P+LVE L N V + G F + L+ +G
Sbjct: 506 IDSNYNVYTWGNGKFYKLGHGNDDIDIYY-PKLVECLNHNKKVCMLSFGCFNSLALNVKG 564
Query: 169 RVYTFSWG 176
VY WG
Sbjct: 565 DVYV--WG 570
Score = 105 (42.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + +WG+G G LG GN + + P++++ L + + ++V G + + + +VY++G
Sbjct: 458 GDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGN 517
Query: 338 GESASLGH 345
G+ LGH
Sbjct: 518 GKFYKLGH 525
Score = 103 (41.3 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 280 VCTWGWGRYGCLGHGNEECESV-PKVVQALNDVKAIHVAT-GDYTTFVVSEDGDVYSFG 336
V TWG G++ LGHGN++ + PK+V+ LN K + + + G + + ++ GDVY +G
Sbjct: 512 VYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 92 (37.4 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
G H++A+ + GV+YS+G N+ G +G+GT + + P PI
Sbjct: 357 GDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 90 (36.7 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G +Y++G G G+ K PQL++ L+N ++ G + + VYT
Sbjct: 458 GDIYSWGYG--GNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYT- 514
Query: 174 SWGNDA--RLGHHTEPNDV 190
WGN +LGH + D+
Sbjct: 515 -WGNGKFYKLGHGNDDIDI 532
Score = 77 (32.2 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDV--KAIHVATGDYTTFVVSEDGDVY 333
+ G+V T G+ + G LG+G + V LN K I +A G VS+ G VY
Sbjct: 769 ESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSDVGLVY 828
Query: 334 SFGCGESASLGHNAIAD 350
+G + + LG I D
Sbjct: 829 GWGKNDKSQLGIGVIKD 845
Score = 71 (30.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTK-LVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+ G +Y +G G+ GV T+ + P+ + + I+ + ++GN + L+ +
Sbjct: 903 ECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIY--KCSLGNSHSLFLTNTNEL 960
Query: 171 YTFSWGNDARLG 182
Y N+ RLG
Sbjct: 961 YVCGSNNNGRLG 972
Score = 63 (27.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 286 GRYGCLGHGNEECE--SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASL 343
GR G C SVP V N++ + G+ + ++S DG +Y FG E
Sbjct: 969 GRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFIYIFG--EFIK- 1025
Query: 344 GHNAIADGQVCSLLFL 359
G N ++ C ++ L
Sbjct: 1026 GSNGNSNNMSCEVISL 1041
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 285 WGRYGCLG-HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
WG + + N +PK + +IH +T Y F ++ GD+ SFG
Sbjct: 569 WGTFNITNNYVNYYISKLPKQINTNYKCISIHAST--YVCFGITLVGDLISFG 619
Score = 53 (23.7 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 147 KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
KN+ V+ + G+ + + G +Y++ +G + RLG
Sbjct: 438 KNV-VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLG 472
Score = 47 (21.6 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIADGQVCSLL 357
+N+V ++ G + E GD+Y +G ES +G + Q C LL
Sbjct: 884 VNNVNNVNGVNG-VNNYSSDECGDLYIWGNAESGKVGLG-VDYTQGCILL 931
Score = 41 (19.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 320 DYTTFVVSEDGDVYSFGCGESASLGH 345
D+ + + E G VY+ G ++ LG+
Sbjct: 761 DHFSVFLLESGKVYTAGYNKNGELGN 786
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 106 (42.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G+ G LGHG+ P V+ L+ + IH+ G + ++ VYS+G
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 340 SASLGHN 346
LGH+
Sbjct: 582 FGQLGHS 588
Score = 102 (41.0 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 36/122 (29%), Positives = 52/122 (42%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-------SLXXXXXXXXXXX 103
G HS AVT GVVY +G N++GQ + P P+ L
Sbjct: 99 GSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACG 158
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFTA 162
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F +
Sbjct: 159 EEHTLALSISREIWAWGTG----CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSL 214
Query: 163 VL 164
L
Sbjct: 215 AL 216
Score = 82 (33.9 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 30/105 (28%), Positives = 50/105 (47%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSR 166
+L+++ G+VY SFG + + ++ S L+ES L VV A G+F + ++
Sbjct: 54 VLLTEDGEVY-----SFGTLPWKSEAAEICPSSPLLESALVGHHVVTVATGSFHSGAVTE 108
Query: 167 EGRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 207
G VY WG +A G N EP P+ + E P++ +
Sbjct: 109 SGVVYM--WGENAA-GQCAVANQQYVSEPSPVSISDSETSPLLAV 150
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 137 (53.3 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 42/127 (33%), Positives = 59/127 (46%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G GHS+ VT G ++ G N GQLG G TEE R + L T+++
Sbjct: 57 GGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIML 116
Query: 111 SDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
++ GQV + G ++FG+ GV G + PQ +E L+ V AA G + G
Sbjct: 117 TEKGQVLSCGSNAFGQL--GVPHGPRKCVVPQAIECLREKVVCVAA-GLRHALATTDTGS 173
Query: 170 VYTFSWG 176
TF WG
Sbjct: 174 --TFQWG 178
Score = 100 (40.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 33/126 (26%), Positives = 63/126 (50%)
Query: 55 SIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXX-XXXXXXXXXXTMLISDA 113
S AV++ V++++G+NS GQLG G E+ P+ + +++++D
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDG 67
Query: 114 GQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
G ++ G + G+ G+ T+ V + + L + Q A G FT +L+ +G+V
Sbjct: 68 GGLFVCGLNKDGQL--GLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQV--L 123
Query: 174 SWGNDA 179
S G++A
Sbjct: 124 SCGSNA 129
Score = 81 (33.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 276 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ G+V + G +G LG HG +C VP+ ++ L + K + VA G ++ G +
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTDTGSTF 175
Query: 334 SFGCGESASLGHNAIADGQVCSLLFLS 360
+G G AS G + GQ L FL+
Sbjct: 176 QWGTG-LASSGRR-LCPGQNLPL-FLT 199
Score = 50 (22.7 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 276 QDGRVCTWGWGRYGCLGH--GNEECE 299
+ G+V TWG YG LG G+ E +
Sbjct: 282 ETGKVFTWGRADYGQLGRTLGSPEAQ 307
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 119 (46.9 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V +WG G+ G LGHG+ P V++LN + + VA G + + ++ V+S+GC
Sbjct: 551 VWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNT 610
Query: 340 SASLGH 345
S LGH
Sbjct: 611 SGQLGH 616
Score = 88 (36.0 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 35/146 (23%), Positives = 65/146 (44%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA G H + + G VYSFG Q + T+ E P L
Sbjct: 42 QAALGARHGVLLVEGGQVYSFGELPWKQ--NQTSSAE--PILEAVLSEQRVVFVAAGSAH 97
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESL-------KNIFVVQAAIGNF 159
+ ++++ G V+ +G++ G+ G+ G ++ +P V L + + +++ A G+
Sbjct: 98 SGVVTEDGGVHMWGENVHGQC--GLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQ 155
Query: 160 FTAVLSREGRVYTFSWGNDARLGHHT 185
T LS + V+ +WG+ +LG +T
Sbjct: 156 HTLALSAKHEVW--AWGSGCQLGLNT 179
Score = 74 (31.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 34/125 (27%), Positives = 48/125 (38%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX-------XXXXX 102
AG HS VT G V+ +G N GQ G P P+ L
Sbjct: 93 AGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVAC 152
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQ-GTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
T+ +S +V+A+G + G+ T V PQ V+ L V+Q A G+ +
Sbjct: 153 GDQHTLALSAKHEVWAWGSG----CQLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHS 208
Query: 162 AVLSR 166
L R
Sbjct: 209 VALVR 213
Score = 50 (22.7 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 122 DSFGEAE--YGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
DS GE + +G T+P+ V L + V+QAA+G +L G+VY+F
Sbjct: 11 DSSGERGLLHTWKGYSYSTAPERV--LLSRPVLQAALGARHGVLLVEGGQVYSF 62
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 136 (52.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/170 (24%), Positives = 79/170 (46%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEE--WRPRPIRSLXXXXXXXXXXXXX 105
+G H++ + + G +YS+G+ G LGHG + ++E + P+ I +
Sbjct: 252 SGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIA 311
Query: 106 ----XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES---------LKNIFVV 152
+M +++ ++Y FG FG+ +G T P+ ++S +K+IF
Sbjct: 312 CGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAG 371
Query: 153 QAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENI 202
A +F+ ++ +G VY++ W + LGH T N P + +L NI
Sbjct: 372 DHA-NSFY---ITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQ-SLSNI 416
Score = 134 (52.2 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 275 GQDGRVCTWGWGRYGCLGHG--NEECESV--PKVVQAL----NDVKAIHVATGDYTTFVV 326
G DG + +WG G +G LGHG + + E++ PK + N+ + + +A G Y + +
Sbjct: 261 GNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFL 320
Query: 327 SEDGDVYSFGCGESASLGH 345
+ D ++Y+FG GE LGH
Sbjct: 321 TNDNEIYTFGYGEFGQLGH 339
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 29/96 (30%), Positives = 44/96 (45%)
Query: 32 RFLLAGEACCRRENSQAIAGP-GHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR 90
R G+ + AG +S +T+ G VYS+G N G LGHGT E + P+ I+
Sbjct: 352 RIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQ 411
Query: 91 SLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGE 126
SL I++ +Y FG ++FG+
Sbjct: 412 SLSNIKKITSGFKHTLAQSINN--DIYVFGDNTFGQ 445
Score = 120 (47.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
DG V +WGW G LGHG E PK +Q+L+++K I +G T S + D+Y FG
Sbjct: 382 DGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSNIKKI--TSGFKHTLAQSINNDIYVFG 439
Score = 120 (47.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES--VPKVVQALNDVKAIH----VATGDYT-TFVVSED 329
D + T+G+G +G LGHG + + +PK +++ D A + + GD+ +F ++ D
Sbjct: 323 DNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTD 382
Query: 330 GDVYSFGCGESASLGH 345
G VYS+G + SLGH
Sbjct: 383 GSVYSWGWNDGGSLGH 398
Score = 59 (25.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLG 76
++G HS+ VT +Y +G N QLG
Sbjct: 182 VSGYEHSLVVTKDDGIYGWGRNHKNQLG 209
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 112 DAGQVYAFGKDSFG 125
D Q+Y+ GK +G
Sbjct: 134 DDNQLYSIGKSKYG 147
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 132 (51.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 48/168 (28%), Positives = 74/168 (44%)
Query: 38 EACCRRENSQAIAGPG--HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXX 95
+ C E+ A+ GPG H V+YS+G+N GQLG G E RP+ + +
Sbjct: 201 KVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQK 260
Query: 96 XXXXXXXXX---XXTMLISDAGQV-------YAFGKDSFGE-AEYGVQGTKLVTSPQLVE 144
T L++ + + FG FGE + G + K + P+ V
Sbjct: 261 SGLTVYDIACGAHHTALLTYRKETPKGPSICWTFG---FGENGQLGHRSNKSSSLPEPVS 317
Query: 145 SL-KNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
L ++ ++V G F T+V+S EG Y +SWG + LG + N E
Sbjct: 318 DLPEHAYLVSVDCGLFHTSVVSSEG--YVWSWGMERGLGLCPDVNFTE 363
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 32/92 (34%), Positives = 48/92 (52%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVV----QALND-VKAIHVATGDYTTFVVSEDGD 331
DG V +WG G +G LG G E E VP +V QA D ++ + VA G Y + VS+DG
Sbjct: 34 DGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGS 93
Query: 332 VYSFGCGESASLGHNAIADGQVCSLLFLSIFQ 363
V+ +G LG + + + L ++F+
Sbjct: 94 VWCWGYNIYGQLGFDG--ENSLAPCLIKNLFE 123
Score = 103 (41.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 48/188 (25%), Positives = 79/188 (42%)
Query: 34 LLAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLX 93
LL E R+ S A AG H+IA+T G VYS+G G+LG G +E P +
Sbjct: 8 LLISEDLSRKIISLA-AGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPN 66
Query: 94 XXXXXXX-----XXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
++ +SD G V+ +G + +G+ G G + +P L+ KN
Sbjct: 67 QAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQL--GFDGENSL-APCLI---KN 120
Query: 149 IFVVQAA----------IGNFFTAVLSREGRVYTFSWGNDARLGH--HTEPNDVEPHPLL 196
+F + + +G+ + G + + + N L + P D EP P L
Sbjct: 121 LFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRL 180
Query: 197 GTLENIPV 204
+ +IP+
Sbjct: 181 -SFTSIPI 187
Score = 88 (36.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 280 VC-TWGWGRYGCLGHGNEECESVPKVVQALND-VKAIHVATGDYTTFVVSEDGDVYSFG 336
+C T+G+G G LGH + + S+P+ V L + + V G + T VVS +G V+S+G
Sbjct: 290 ICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Score = 74 (31.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 282 TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHV---ATGDYTTFVVSEDGDV------ 332
+WG +G LG G+ E + P+ V+ N + V A G + T +++ +
Sbjct: 231 SWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSI 290
Query: 333 -YSFGCGESASLGHNA 347
++FG GE+ LGH +
Sbjct: 291 CWTFGFGENGQLGHRS 306
Score = 62 (26.9 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 277 DG--RVCTWGWGRYGCLGHGN-EECESVPKVVQALNDVK 312
DG ++ +WG GR G LG GN +C VP +V N++K
Sbjct: 400 DGGYKLWSWGRGRNGVLGTGNVSDCY-VPTLVFWPNELK 437
Score = 58 (25.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 26/91 (28%), Positives = 43/91 (47%)
Query: 277 DGRVCTWGWGR-YG-CLGHGNEECE----SVPKVVQALNDV--KAIHVATGDYTTFVVSE 328
+G V +WG R G C E E SVP+ + + + V+ G T +V +
Sbjct: 341 EGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVD 400
Query: 329 DG-DVYSFGCGESASLGHNAIADGQVCSLLF 358
G ++S+G G + LG ++D V +L+F
Sbjct: 401 GGYKLWSWGRGRNGVLGTGNVSDCYVPTLVF 431
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 77/324 (23%), Positives = 123/324 (37%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
H +A+ +G Y++G N GQLGHG + RP + L T+++SD
Sbjct: 69 HCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDD 128
Query: 114 GQVYAFGKDSFGE-----AEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR-E 167
GQ FG + +G+ A+ G ++ ++P + + + V A G FT LS E
Sbjct: 129 GQSLGFGWNKYGQLGLGSAKNGFVSVEVESTP--LPCVVSDEVTNVACGADFTVWLSSTE 186
Query: 168 GR-VYTFSWGNDARLGHHTEPN------------DVEPHP-LLGTLENIPVVQIXXXXXX 213
G + T +LGH T+ + +P P + +L +V++
Sbjct: 187 GASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNH 246
Query: 214 XXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXX 273
+G VY+ + DE PR I+ FQ N+ P
Sbjct: 247 TVAV--DKNGY-VYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSA----- 298
Query: 274 XGQDGRVCTWGWGRYGCLGH--GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
G CT G G+ G N + PK + L+ + +G FV D
Sbjct: 299 -GSANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFV-GADSS 356
Query: 332 VYSFGCGESASLGHNAIADGQVCS 355
S+G + LG+ +GQ S
Sbjct: 357 CISWGHAQYGELGYGP--NGQKSS 378
Score = 103 (41.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/91 (29%), Positives = 40/91 (43%)
Query: 35 LAGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI----R 90
LAGE + G H++AV G VY++G G+LGH ++EW PR I R
Sbjct: 232 LAGETIVK-----VACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQR 286
Query: 91 SLXXXXXXXXXXXXXXTMLISDAGQVYAFGK 121
+ + + GQ+Y +GK
Sbjct: 287 NNVLPPNAILSAGSANSACTAGGGQLYMWGK 317
Score = 78 (32.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 275 GQDGRVCTWGWGRYGCLGHG--NEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
G D +WG +YG LG+G ++ + PK V L + + VA G + V+ + D+
Sbjct: 352 GADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDI 411
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 49/167 (29%), Positives = 72/167 (43%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP---IRSLXXXXXXX 99
+E + + G S+ +TS G V + GSN +LG E P P +
Sbjct: 501 QEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLG 560
Query: 100 XXXXXXXTMLISDAGQVY-----AFGKD-SFGEAEYGVQGT---KLVTSPQLVESLKNIF 150
T+L D G + A G +FG ++G GT ++ +P V+ L+ I
Sbjct: 561 SAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIK 620
Query: 151 VVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPL 195
+V A G+ FT + EG VY SWG AR LG E + P P+
Sbjct: 621 MVMVACGDAFTVAIGAEGEVY--SWGKGARGRLGRRDEDAGL-PRPV 664
Score = 127 (49.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 31 LRFLLAGEACCRRENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
L F G A RE + G HS AVT+ G Y+FGSN GQLG + P +
Sbjct: 554 LSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRV 613
Query: 90 RSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-N 148
+ L T+ I G+VY++GK + G + L QL E+
Sbjct: 614 QGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYT 673
Query: 149 IFVVQAAIGNFFTAVLS 165
+ V GN AV S
Sbjct: 674 VTSVSCCHGNTLLAVRS 690
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 56/260 (21%), Positives = 100/260 (38%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG+ + +P + +L + +S G+++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELF 471
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
A+G+ G G + + PQ V + + G + +L+ GRV
Sbjct: 472 AWGRGDGGRLGLGTRESH--NCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNR 529
Query: 178 DARLGHHTEPNDVEPHP-------LLGT-LENIPVVQ---IXXXXXXXXXXXXQPSGMAV 226
+LG + EP P L T L + P+ + + SG A
Sbjct: 530 FNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASG-AC 588
Query: 227 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 286
Y+ SR + P ++ + ++ G +G V +WG G
Sbjct: 589 YTFGSNQHGQLGTSSRRVSRAPCRVQGLE--GIKMVMVACGDAFTVAIGAEGEVYSWGKG 646
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG +E+ +P+ VQ
Sbjct: 647 ARGRLGRRDEDA-GLPRPVQ 665
Score = 121 (47.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + T+G G GCLGHG+ S P +V+AL + + VA G +S DG+++++G
Sbjct: 416 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGR 475
Query: 338 GESASLG 344
G+ LG
Sbjct: 476 GDGGRLG 482
Score = 108 (43.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G T+G ++G LG + P VQ L +K + VA GD T + +G+VYS+G
Sbjct: 586 GACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGK 645
Query: 338 GESASLG 344
G LG
Sbjct: 646 GARGRLG 652
Score = 89 (36.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 409 TACLTDRGIIMTFGSGSNGCLGHG--SLTDISQPTIVEALLGYEMVQVACGASHVLALSA 466
Query: 167 EGRVYTFSWGNDARLG 182
+G ++ + G+ RLG
Sbjct: 467 DGELFAWGRGDGGRLG 482
Score = 75 (31.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+ +E + + A G+ FTA L+ G + TF G++ LGH + D+ ++ L
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSL-TDISQPTIVEALL 447
Query: 201 NIPVVQI 207
+VQ+
Sbjct: 448 GYEMVQV 454
Score = 39 (18.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 146 LKNIFVVQAAIGNFFTAVLSREGRV 170
+ N VVQ A G A ++R GR+
Sbjct: 335 MPNTEVVQVAAGRTQKAGVTRSGRL 359
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 117 (46.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G +++ +T G VYS G S G+ GH + P I L ++ +
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAM 261
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK----NIFVVQAAIGNFFTAVLSR 166
D GQVY++G + G G +V +P L+ + N A G + +L
Sbjct: 262 DDLGQVYSWGNGASGRLGLG-NDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGS 320
Query: 167 EGRVYTFSWGNDARLGH 183
G VY+F +LG+
Sbjct: 321 NGDVYSFGSNLHYKLGY 337
Score = 107 (42.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 40/147 (27%), Positives = 68/147 (46%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI------RSLXXXXXXX 99
++IA G HS+A+ G VYS+G+ +SG+LG G + P P R
Sbjct: 249 KSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGN-DFSIVPTPTLISVINRFGSNEIATA 307
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEY----GVQGTKLVTSPQLVESLKNIFVVQAA 155
+M++ G VY+FG + + Y G G + ++P+ + S+ + + A
Sbjct: 308 IAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQ--STPKKIPSILQMKSIACA 365
Query: 156 IGNFFTAVLSREGRVYTFSWGNDARLG 182
++ + L +GRVYT + RLG
Sbjct: 366 --SWHSVFLDLKGRVYTCGSSTNGRLG 390
Score = 93 (37.8 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 42/146 (28%), Positives = 63/146 (43%)
Query: 44 ENSQAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGH----GTTEEEWRPRPIRSLXXXXXX 98
E + AIA G +S+ + S G VYSFGSN +LG+ G + P+ I S+
Sbjct: 303 EIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSI 362
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-------VTSPQLVESLKNIFV 151
++ + G+VY G + G + +T+ + +L V
Sbjct: 363 ACASWH--SVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEV 420
Query: 152 V-QAAIGNFFTAVLSREGRVYTFSWG 176
+ Q A G FT VLS G +Y SWG
Sbjct: 421 IKQIACGTNFTTVLSESGSLY--SWG 444
Score = 81 (33.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 276 QDGRVCTWGWGRYGCLGH----GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+ G + +WG LG G E S PK+V ALN A GD +S+ G+
Sbjct: 436 ESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGE 495
Query: 332 VYSFGCGESASLGHNAIADGQV 353
V+ +G + G + + ++
Sbjct: 496 VFCYGDNSTLQCGFGEVLNFEI 517
Score = 60 (26.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/77 (32%), Positives = 32/77 (41%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESV-PKVVQALNDV--------KAI-HVATGDYTTFVVS 327
GRV T G G LG S P+ V N + I +A G T V+S
Sbjct: 376 GRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLS 435
Query: 328 EDGDVYSFGCGESASLG 344
E G +YS+G + LG
Sbjct: 436 ESGSLYSWGVNTKSQLG 452
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 106 (42.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V TWG G+ G LGHG+ P V+ L+ + IH+ G + ++ VYS+G
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 340 SASLGHN 346
LGH+
Sbjct: 582 FGQLGHS 588
Score = 97 (39.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 36/123 (29%), Positives = 53/123 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX---- 106
G HS AVT GVVY +G N++GQ + P P+ S+
Sbjct: 99 GSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPV-SISDSETSPSLAVRILQLAC 157
Query: 107 ----TMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFT 161
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G F +
Sbjct: 158 GEEHTLALSLSREIWAWGTG----CQLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHS 213
Query: 162 AVL 164
L
Sbjct: 214 LAL 216
Score = 81 (33.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 34/144 (23%), Positives = 59/144 (40%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPR-PI--RSLXXXXXXXXXXX 103
QA G H + +T G VYSFG+ L + E P P+ +L
Sbjct: 45 QAALGVRHGVLLTEDGEVYSFGT-----LPWKSESAEICPSSPLLESALVGHHVITVATG 99
Query: 104 XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN-----IFVVQAAIGN 158
+ ++++G VY +G+++ G+ Q SP + + + ++Q A G
Sbjct: 100 SFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGE 159
Query: 159 FFTAVLSREGRVYTFSWGNDARLG 182
T LS ++ +WG +LG
Sbjct: 160 EHTLALSLSREIW--AWGTGCQLG 181
Score = 78 (32.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES-LKNIFVVQAAIGNFFTAVLSR 166
+L+++ G+VY SFG + + ++ S L+ES L V+ A G+F + ++
Sbjct: 54 VLLTEDGEVY-----SFGTLPWKSESAEICPSSPLLESALVGHHVITVATGSFHSGAVTE 108
Query: 167 EGRVYTFSWGNDARLGHHTEPNDV---EPHPL-LGTLENIPVVQI 207
G VY WG +A G N EP P+ + E P + +
Sbjct: 109 SGVVYM--WGENAA-GQCAVANQQYVPEPSPVSISDSETSPSLAV 150
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 129 (50.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 45/144 (31%), Positives = 62/144 (43%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLI 110
G GHS VT +G ++ G N GQLG G TE+ +SL T+++
Sbjct: 57 GGGHSAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIIL 116
Query: 111 SDAGQVYAFGKDSFGEAEYGV-QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGR 169
+ GQV + G +SFG+ GV G + PQ +E ++ VV A G + G
Sbjct: 117 TKNGQVLSCGSNSFGQL--GVPHGPRRCVVPQAIE-VQREKVVSIAAGLRHALAATASGL 173
Query: 170 VYTFSWGND-ARLGHHTEPNDVEP 192
V F WG A G P P
Sbjct: 174 V--FQWGTGLASSGRRLCPGQTLP 195
Score = 98 (39.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 33/132 (25%), Positives = 60/132 (45%)
Query: 52 PGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXX-XXXXXXXXXXTMLI 110
P S A ++++G+NS GQLG G E+ P+ + + ++
Sbjct: 5 PSASEAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIV 64
Query: 111 SDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRV 170
+D G ++ G + G+ G+ T+ V L +SL + Q A G FT +L++ G+V
Sbjct: 65 TDQGSLFVCGLNKDGQL--GLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQV 122
Query: 171 YTFSWGNDARLG 182
+ + +LG
Sbjct: 123 LSCGSNSFGQLG 134
Score = 78 (32.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 276 QDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
++G+V + G +G LG HG C VP+ ++ + K + +A G + G V+
Sbjct: 118 KNGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIEVQRE-KVVSIAAGLRHALAATASGLVF 175
Query: 334 SFGCGESASLGHNAIADGQVCSLLFLSIFQYLQIWLNLSS 373
+G G AS G + GQ L FL+ + ++ + L +
Sbjct: 176 QWGTG-LASSGRR-LCPGQTLPL-FLTAKEPSKVTVGLEN 212
Score = 53 (23.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 248 PRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES-VPK 303
P+ IE + N + + G+V TWG YG LG E E PK
Sbjct: 255 PQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLGRTLESPEGWKPK 311
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 45/169 (26%), Positives = 68/169 (40%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG------------HGTTEEEWRPRPIR 90
+E + I G S+ +T G + GSN +LG H EE P+
Sbjct: 501 QEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLG 560
Query: 91 S--LXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
S L + ++ +G Y FG + G+ G ++ +P V+ L+
Sbjct: 561 SAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQL--GTNARRVSRAPCQVQGLQG 618
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPL 195
I + A G+ FT + EG VY SWG AR LG E + P P+
Sbjct: 619 IKIAMVACGDAFTVAIGAEGEVY--SWGKGARGRLGRRDEDAAL-PRPV 664
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 39/135 (28%), Positives = 55/135 (40%)
Query: 31 LRFLLAGEACCRRENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
L F G A +E ++ G HS AVT+ G Y+FGSN GQLG P +
Sbjct: 554 LNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQV 613
Query: 90 RSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-N 148
+ L T+ I G+VY++GK + G + L QL E+
Sbjct: 614 QGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAALPRPVQLDETQPYT 673
Query: 149 IFVVQAAIGNFFTAV 163
+ V GN A+
Sbjct: 674 VTSVSCCHGNTLLAI 688
Score = 101 (40.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G T+G ++G LG P VQ L +K VA GD T + +G+VYS+G
Sbjct: 586 GDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGK 645
Query: 338 GESASLG 344
G LG
Sbjct: 646 GARGRLG 652
Score = 92 (37.4 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 29/93 (31%), Positives = 43/93 (46%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++D G + FG S G +G G ++ P +VE+L +VQ A G LS
Sbjct: 409 TACLTDRGIIMTFGSGSNGCLGHG--GLNDISQPTIVEALLGYEMVQVACGASHVLALST 466
Query: 167 EGRVYTFSWGNDARLG-----HHTEPNDVEPHP 194
E ++ + G+ RLG H+ P V P P
Sbjct: 467 ERELFAWGRGDGGRLGLGTRESHSCPQQV-PMP 498
Score = 89 (36.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG + +P + +L + +S +++
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELF 471
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLV 143
A+G+ G G + + + PQ V
Sbjct: 472 AWGRGDGGRLGLGTRESH--SCPQQV 495
Score = 78 (32.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+ +E + + A G+ FTA L+ G + TF G++ LGH ND+ ++ L
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGL-NDISQPTIVEALL 447
Query: 201 NIPVVQI 207
+VQ+
Sbjct: 448 GYEMVQV 454
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 103 (41.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 38/123 (30%), Positives = 54/123 (43%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR-------SLXXXXXXXXXX 102
AG H+ AVT GVVY +G+NSSGQ P+PI L
Sbjct: 98 AGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVRVLQLAC 157
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKL-VTSPQLVESLKNIFVVQAAIGNFFT 161
T+ +S + +++A+G + G+ T VT PQ VE L V+Q A G + +
Sbjct: 158 GEEHTLALSLSREIWAWGSG----CQLGLITTTFPVTKPQKVEHLAGRVVLQIACGAYHS 213
Query: 162 AVL 164
L
Sbjct: 214 LAL 216
Score = 97 (39.2 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V +WG G+ G LGHG+ P V++L+ + I ++ G + + ++ VYS+G
Sbjct: 523 VWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNI 582
Query: 340 SASLGH 345
LGH
Sbjct: 583 FGQLGH 588
Score = 96 (38.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 40/151 (26%), Positives = 60/151 (39%)
Query: 41 CRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI--RSLXXXXXX 98
C + QA G H + +T G VYSFG + G EE PI +L
Sbjct: 39 CGKTVLQAALGTNHGLLLTEGGEVYSFGK-LPWRSG---PEEFCANSPILENTLLGQHVI 94
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVE-------SLKNIFV 151
+++ G VY +G +S G+ V V PQ + L ++ V
Sbjct: 95 TVAAGSFHNGAVTEGGVVYMWGNNSSGQC--AVANQPYVPEPQPISISDSETSPLLSVRV 152
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWGNDARLG 182
+Q A G T LS ++ +WG+ +LG
Sbjct: 153 LQLACGEEHTLALSLSREIW--AWGSGCQLG 181
Score = 94 (38.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 108 MLISDAGQVYAFGKDSF--GEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+L+++ G+VY+FGK + G E+ SP L +L V+ A G+F ++
Sbjct: 54 LLLTEGGEVYSFGKLPWRSGPEEF------CANSPILENTLLGQHVITVAAGSFHNGAVT 107
Query: 166 REGRVYTFSWGNDA--RLGHHTEPNDVEPHPL-LGTLENIPVVQI 207
G VY WGN++ + +P EP P+ + E P++ +
Sbjct: 108 EGGVVYM--WGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSV 150
Score = 74 (31.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSE-DGDVYSFGC 337
+V +WG +G LGH N +VP++ + D A DY+ F+ E D + C
Sbjct: 574 QVYSWGSNIFGQLGHTNSPT-TVPRLAKVCGDGVWSTAAGSDYSLFLADEEDFQPGLYYC 632
Query: 338 G-ESAS--LGHNAIADGQVCSLLFLSIFQYL 365
G E+A+ L N + V LL S Y+
Sbjct: 633 GQETATDNLSENNCSKNPVL-LLSCSKIGYI 662
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 135 (52.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 43/142 (30%), Positives = 65/142 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
QA AG H++ ++ G VYSFG N G LG T+ E P +
Sbjct: 71 QAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSH 130
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGT--KLVTSPQLVESLKNIFVVQAAIGNFFTAVL 164
T ++D G+V+ +G SF + GV G + S V+ ++ VV+ A GN +L
Sbjct: 131 TAALTDDGRVFLWG--SFRDNN-GVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVML 187
Query: 165 SREGRVYTFSWGNDARLGHHTE 186
+ +G +YT G +LG E
Sbjct: 188 TADGDLYTLGCGEQGQLGRVPE 209
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/160 (31%), Positives = 75/160 (46%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDA 113
H T G+V + G GQLG G E R +P T+ +S +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVME-RKKPALVSIPEDVVQAEAGGMHTVCLSKS 85
Query: 114 GQVYAFGKDSFGEA--EYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
GQVY+FG + G + V+G+++V P VE + VVQ + G+ TA L+ +GRV
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMV--PGKVELQEK--VVQVSAGDSHTAALTDDGRV- 140
Query: 172 TFSWG----NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
F WG N+ +G EP P+ L+ +PVV++
Sbjct: 141 -FLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLD-VPVVKV 177
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 45/169 (26%), Positives = 70/169 (41%)
Query: 43 RENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLG------------HGTTEEEWRPRPIR 90
+E + + G S+ +T G + GSN +LG H EE P+
Sbjct: 503 QEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLG 562
Query: 91 S--LXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKN 148
S L ++L++ +G Y FG + G+ G ++ +P V+ L+
Sbjct: 563 SAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQL--GTNARRVSRAPCRVQGLQG 620
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDAR--LGHHTEPNDVEPHPL 195
I + A G+ FT + EG V FSWG AR LG E + P P+
Sbjct: 621 IKISTVACGDAFTVAIGAEGEV--FSWGKGARGRLGRKDEDAGL-PRPV 666
Score = 96 (38.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG+ + +P + +L + +S +++
Sbjct: 414 LTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELF 473
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLV 143
A+G+ G G + + PQLV
Sbjct: 474 AWGRGDGGRLGLGTRESHCC--PQLV 497
Score = 95 (38.5 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G T+G ++G LG P VQ L +K VA GD T + +G+V+S+G
Sbjct: 588 GDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGK 647
Query: 338 GESASLG 344
G LG
Sbjct: 648 GARGRLG 654
Score = 86 (35.3 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 411 TACLTDRGIIMTFGSGSNGCLGHGSLND--ISQPTIVEALLGYEMVQVACGASHVLALST 468
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEP 192
E ++ + G+ RLG T + P
Sbjct: 469 ERELFAWGRGDGGRLGLGTRESHCCP 494
Score = 82 (33.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 36/159 (22%), Positives = 62/159 (38%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA E Q G H +A++++ ++++G G+LG GT E P+ +
Sbjct: 446 EALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEA 505
Query: 98 XXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP---QLVESLKNIFVVQA 154
+M+++ GQ A G + F + G+ L P Q VE + +
Sbjct: 506 QRVVCGIDSSMILTVPGQALACGSNRFNKL--GLDPLSLGEEPAPHQQVEEAVTFTPLGS 563
Query: 155 A-----------IGNFFTAVLSREGRVYTFSWGNDARLG 182
A +G + +L+ G YTF +LG
Sbjct: 564 APLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLG 602
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+ +E + + A G+ FTA L+ G + TF G++ LGH + ND+ ++ L
Sbjct: 391 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSL-NDISQPTIVEALL 449
Query: 201 NIPVVQI 207
+VQ+
Sbjct: 450 GYEMVQV 456
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 57/267 (21%), Positives = 104/267 (38%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG+ + +P + +L + +S +++
Sbjct: 415 LTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELF 474
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT----- 172
A+G+ G G + + + PQ V + G + +L+ GR
Sbjct: 475 AWGRGDGGRLGLGTRESH--SCPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNR 532
Query: 173 FS-WGNDA-RLGHHTEPNDVEPHPL----LGT--LENIPVVQIXXXXXXXXXXXXQPSGM 224
F+ G D LG PN L LG+ + P++ + SG
Sbjct: 533 FNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTA--SGD 590
Query: 225 AVYSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWG 284
Y+ +R + P ++ Q N++ G +G V +WG
Sbjct: 591 C-YTFGSNQHGQLGTNARRVSRAPCQVQGLQ--NIKIAMVACGDAFTVAVGAEGEVYSWG 647
Query: 285 WGRYGCLGHGNEECESVPKVVQALNDV 311
G G LG +E+ +P+ VQ L+++
Sbjct: 648 KGARGRLGRRDEDA-GLPRPVQ-LDEI 672
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 31/96 (32%), Positives = 43/96 (44%)
Query: 31 LRFLLAGEACCRRENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
L F G A RE ++ G HS AVT+ G Y+FGSN GQLG P +
Sbjct: 557 LSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQV 616
Query: 90 RSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFG 125
+ L T+ + G+VY++GK + G
Sbjct: 617 QGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARG 652
Score = 104 (41.7 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G T+G ++G LG P VQ L ++K VA GD T V +G+VYS+G
Sbjct: 589 GDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGK 648
Query: 338 GESASLG 344
G LG
Sbjct: 649 GARGRLG 655
Score = 86 (35.3 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 27/93 (29%), Positives = 41/93 (44%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 412 TACLTDRGIIMTFGSGSNGCLGHGSLND--ISQPTIVEALLGYEMVQVACGASHVLALST 469
Query: 167 EGRVYTFSWGNDARLG-----HHTEPNDVEPHP 194
E ++ + G+ RLG H+ P V P
Sbjct: 470 ERELFAWGRGDGGRLGLGTRESHSCPQQVSMPP 502
Score = 81 (33.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+ +E + + A G+ FTA L+ G + TF G++ LGH + ND+ ++ L
Sbjct: 392 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSL-NDISQPTIVEALL 450
Query: 201 NIPVVQI 207
+VQ+
Sbjct: 451 GYEMVQV 457
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 126 (49.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 44/145 (30%), Positives = 63/145 (43%)
Query: 44 ENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEE----WRPRPIRSLXXXXXXX 99
E Q G H IA+T+ G VY++G+ QLG E P+P L
Sbjct: 227 EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQP---LALKNIIS 283
Query: 100 XXXXXXXTMLISDAGQVYAFGKD---SFG-EAEYGVQGTKLVTSPQLVESLKNIFVVQAA 155
+ I + G+VYA+G + G E E +G ++T P LV++L+ V
Sbjct: 284 VGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGA-VITKPTLVDALEGYNVKSIT 342
Query: 156 IGNFFTAVLSREGRVYTFSWGNDAR 180
G T L +GRV +WG D R
Sbjct: 343 GGEHHTLALLEDGRV--LAWGRDDR 365
Score = 110 (43.8 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQL--VESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173
VY FG S E G + +V P+L + S + VV A+G +A LS +GRVYT+
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 174 SWGNDARLGHHTE 186
+D LG T+
Sbjct: 133 GVNDDYALGRLTK 145
Score = 68 (29.0 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 281 CTWGWGRYGC----LGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
C + WG + C LG+ + + + L ++ +ATG ++ G VY++G
Sbjct: 194 CCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEI--CQLATGTDHIIALTTTGKVYTWG 251
Query: 337 CGESASLGHNAI 348
G+ LG +
Sbjct: 252 NGQQFQLGRRML 263
Score = 59 (25.8 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 277 DGRVCTWGWGRYGCLGHG-NEECESVPKVVQ--ALNDVKAIHVA 317
DG+V +WG +G G N+E +VP +V+ A+ +V AI VA
Sbjct: 418 DGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEV-AIRVA 460
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 57/260 (21%), Positives = 97/260 (37%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG + +P+ + +L + +S+ +V+
Sbjct: 412 LTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVF 471
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 177
A+G+ G G + SPQ V + G + VL+ ++
Sbjct: 472 AWGRGDNGRLGLGT--LECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNR 529
Query: 178 DARLG-------HHTEPND-VEPHPLLGTLENIPVVQ---IXXXXXXXXXXXXQPSGMAV 226
+LG P D VE + ++ P+ Q + SG
Sbjct: 530 CNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQC- 588
Query: 227 YSVXXXXXXXXXXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWG 286
Y+ S + + P L+ + + + G DG VCTWG G
Sbjct: 589 YTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKV--TVVACGDAFTVAIGADGEVCTWGKG 646
Query: 287 RYGCLGHGNEECESVPKVVQ 306
G LG +EE +P+ VQ
Sbjct: 647 ARGRLGRKDEET-GMPRPVQ 665
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + T+G G GCLGHGN S PK+V+AL + + VA G VS + +V+++G
Sbjct: 416 GIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGR 475
Query: 338 GESASLG 344
G++ LG
Sbjct: 476 GDNGRLG 482
Score = 92 (37.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G+ T+G ++G LG + VP +V L +K VA GD T + DG+V ++G
Sbjct: 586 GQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGK 645
Query: 338 GESASLG 344
G LG
Sbjct: 646 GARGRLG 652
Score = 92 (37.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 41/160 (25%), Positives = 62/160 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGH----GTTEE---EWRPRPIRSLXXXXXXX 99
Q AG VT G + + + G G G TE+ ++ R +
Sbjct: 342 QVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKH 401
Query: 100 XXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNF 159
T ++D G + FG S G +G T V+ P++VE+L +VQ A G
Sbjct: 402 VSCGDLFTACLTDRGIIMTFGSGSNGCLGHG-NFTD-VSQPKIVEALLGYEMVQVACGAS 459
Query: 160 FTAVLSREGRVYTFSWGNDARLGH-----HTEPNDVEPHP 194
+S E V+ + G++ RLG H P V P
Sbjct: 460 HVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPP 499
Score = 72 (30.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+ +E + + + G+ FTA L+ G + TF G++ LGH DV ++ L
Sbjct: 389 RFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNF-TDVSQPKIVEALL 447
Query: 201 NIPVVQI 207
+VQ+
Sbjct: 448 GYEMVQV 454
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 116 VYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI 156
V KD A+ Q KL++ P ++E +N F+ A+
Sbjct: 37 VEQMSKDERLAAQNECQVLKLLSHPNVIEYYEN-FLEDKAL 76
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGT-TEEEWRPRPIRSLXXXXXXXX-------- 100
+G GHS+ +T+KG+V+SFG N GQLG G + ++ P+ I+
Sbjct: 399 SGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 101 XXXXXXTMLISDAGQVYAFGKDSFGE--AEYGVQGTKLVTSPQLVES----LKNIFVVQA 154
++ ISD YA+G+ +G VQG + + P L+ S + N+ +
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNL--PVLINSNSVVVDNVKFIDV 516
Query: 155 AIGNFFTAVLSREGRVYTFSWGNDA--RLGHHTEPNDVEP 192
+ G +S +G +Y SWG +A RLG ++ N + P
Sbjct: 517 SSGFQHNVAMSIDGSLY--SWGCNAGQRLGFKSDENQLTP 554
Score = 97 (39.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 278 GRVCTWGWGRYGCLGHGNEEC--ESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
G + T+G G +G LG G + +S PK+VQ+L I +++G + V++ G V+SF
Sbjct: 357 GLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSF 416
Query: 336 GCGESASLGHNAIADGQ 352
G + LG ++ Q
Sbjct: 417 GRNDQGQLGIGCFSNQQ 433
Score = 95 (38.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 46/210 (21%), Positives = 90/210 (42%)
Query: 149 IFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHP-LLGTLENIPVVQI 207
I +V+ + G +AV++ +G ++TF G+ RLG + ++ P L+ +L+ ++ +
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 208 XXXXXXXXXXXXQPSGMAVYSVXXXXXXXXXXXSRTDEKH-PRLIEQFQLLNLQPXXXXX 266
+ G+ V+S ++++ P+ I+ FQ Q
Sbjct: 398 SSGGGHSLVLTNK--GL-VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPIN 454
Query: 267 XXXXXXXXGQDGRVC----TWGWGR--YGCLGHGNEEC--ESVPKVVQA----LNDVKAI 314
+ T+ WGR YG LG + ++P ++ + +++VK I
Sbjct: 455 IIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFI 514
Query: 315 HVATGDYTTFVVSEDGDVYSFGCGESASLG 344
V++G +S DG +YS+GC LG
Sbjct: 515 DVSSGFQHNVAMSIDGSLYSWGCNAGQRLG 544
Score = 85 (35.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 110 ISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK---NIFVVQAAIGNFFTAVLSR 166
I+D G +Y FG G+ +G + +SP+LVE + ++ VV A G + L+
Sbjct: 203 ITDQGNLYTFGDGLLGKLGHG--NLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTI 260
Query: 167 EGRVYTFSWG-NDA-RLG 182
G+VY SWG ND+ +LG
Sbjct: 261 CGKVY--SWGGNDSCQLG 276
Score = 82 (33.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI---RSLXXXXXXXXXXXXXXT 107
G HS +T +G +Y+FG G+LGHG E P+ + ++ +
Sbjct: 196 GAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHS 255
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLV 143
+ ++ G+VY++G + + G + S PQL+
Sbjct: 256 LALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLI 292
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 70/301 (23%), Positives = 113/301 (37%)
Query: 63 VVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXXXTMLISDAGQVYAFGK 121
++Y++G+NS GQLG G E++ PR + S L + LISD+G++ G+
Sbjct: 38 LLYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQ 97
Query: 122 DSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARL 181
+ G+ G+ T + + Q V Q + G FT +L+ +G V +L
Sbjct: 98 NHKGQL--GLGHTLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQL 155
Query: 182 GHHTEPNDVEPHPLLGTLENIPVVQIXXXXXXXXXXXXQPS----GMAVYSVXXXXXXXX 237
G E PLL + PV + G + S
Sbjct: 156 GVSAEKTH-SAEPLLLKSFHEPVTSVAAGLRHALASTASGCVYQWGTGLSSHAKRMLNPQ 214
Query: 238 XXXSRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEE 297
S K P L+ F + Q +G + WG ++G L G+
Sbjct: 215 PVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTV--NGELFLWGSNKHGQLISGSLF 272
Query: 298 CESVPKVVQA--LNDVKAIHVATGDYTTFVV-SEDGDVYSFGCGESASLGH-NAIADGQV 353
+P + L D + V +G +T V +E G V+++G LG N + Q
Sbjct: 273 LP-LPVALDRSMLQDERVSDVHSG-WTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQS 330
Query: 354 C 354
C
Sbjct: 331 C 331
Score = 99 (39.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 41/160 (25%), Positives = 65/160 (40%)
Query: 38 EACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEE--EWRPRPIRSLXX 94
E+ + E +A+ G G HS ++ G + G N GQLG G T E ++ P+
Sbjct: 65 ESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKGQLGLGHTLEIMTFQTCPLPGFGR 124
Query: 95 XXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQ 153
T++++ G V A G ++FG+ GV K ++ P L++S V
Sbjct: 125 VQQVSCGWDF--TIILTGDGLVLACGSNAFGQL--GVSAEKTHSAEPLLLKSFHEP-VTS 179
Query: 154 AAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPH 193
A G + G VY + G + P V H
Sbjct: 180 VAAGLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSH 219
Score = 84 (34.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVP---KVVQALNDVKAIHVAT-----GDYTTFVVS 327
+ GRV TWG YG LG N E +V++ +VKA+ AT ++ VV
Sbjct: 304 ESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVVG 363
Query: 328 EDGDVYSFGCGESASLGHNAIAD 350
G V+S+G E G ++ D
Sbjct: 364 --GRVFSWGWNEHGMCGDGSLQD 384
Score = 81 (33.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
GRV +WGW +G G G+ + + P+ + AL D A+ + G
Sbjct: 364 GRVFSWGWNEHGMCGDGSLQDITQPQPIPALADAVALLIGCG 405
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 126 (49.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G + T+G G GCLGHGN + PK+V+AL + + V+ G V+ + +V+S+G
Sbjct: 417 GIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGR 476
Query: 338 GESASLGHNAIADGQVC 354
G++ LG A D C
Sbjct: 477 GDNGRLGL-ATQDSHNC 492
Score = 106 (42.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 45/178 (25%), Positives = 77/178 (43%)
Query: 38 EACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX 97
EA E Q G H +AVT++ V+S+G +G+LG T + P+ +
Sbjct: 445 EALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEA 504
Query: 98 XXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAA- 155
+M++S Q+ A G + F + V GT+ +S VE + +VQ+A
Sbjct: 505 QRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAP 564
Query: 156 ----------IGNFFTAVLSREGRVYTFSWGNDARLG-HHTEPNDVEPHPLLGTLENI 202
IG + ++ +G+ +TF +LG H + V P+ + G L+ I
Sbjct: 565 LNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRV-PYQVSG-LQGI 620
Score = 100 (40.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 34/153 (22%), Positives = 69/153 (45%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG + +P+ + +L + +++ +V+
Sbjct: 413 LTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVF 472
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAI-GNFFTAVLSREGRVYTFSWG 176
++G+ G Q + PQ V SL F Q + G + ++S + ++ + G
Sbjct: 473 SWGRGDNGRLGLATQDSH--NCPQQV-SLPADFEAQRVLCGVDCSMIMSTQHQI--LACG 527
Query: 177 NDA--RLGHHTEPNDVEPHPLLGTLENIPVVQI 207
N+ +LG EP +E + + Q+
Sbjct: 528 NNRFNKLGLDKVSGTEEPSSFC-QVEEVHLFQL 559
Score = 91 (37.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++D G + FG S G +G VT P++VE+L +VQ + G ++
Sbjct: 410 TTCLTDRGIIMTFGSGSNGCLGHG--NFNDVTQPKIVEALLGYELVQVSCGASHVLAVTN 467
Query: 167 EGRVYTFSWGNDARLGHHTE 186
E V+++ G++ RLG T+
Sbjct: 468 EREVFSWGRGDNGRLGLATQ 487
Score = 87 (35.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
+ G+ T+G ++G LG + VP V L + A GD T + +G+VY++
Sbjct: 585 EKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITM--AACGDAFTLAIGAEGEVYTW 642
Query: 336 GCGESASLG 344
G G LG
Sbjct: 643 GKGARGRLG 651
Score = 87 (35.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLV----ESLKNIFVVQAAIGNFFTAV 163
M ++ +G++ + S G E + G PQ + E + + + G+ FT
Sbjct: 353 MGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTC 412
Query: 164 LSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
L+ G + TF G++ LGH NDV ++ L +VQ+
Sbjct: 413 LTDRGIIMTFGSGSNGCLGHGNF-NDVTQPKIVEALLGYELVQV 455
Score = 69 (29.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 275 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVAT 318
G +G V TWG G G LG EE +PK VQ L++ A V +
Sbjct: 634 GAEGEVYTWGKGARGRLGR-KEEDFGIPKPVQ-LDESHAFTVTS 675
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 137 VTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVE 191
+++P + L N V+Q ++G +++ GR+ T+ G T P VE
Sbjct: 329 ISTPLRLPML-NTEVIQVSLGRTQKMGVTKSGRLITWE-APSVGSGEPTLPGAVE 381
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 143 (55.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 35/104 (33%), Positives = 50/104 (48%)
Query: 241 SRTDEKHPRLIEQFQLLNLQPXXXXXXXXXXXXXGQDGRVCTWGWGRYGCLGHGNEECES 300
S+ + HP L++ F + Q G+V T G GR G LGHG+E+
Sbjct: 159 SQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCL 218
Query: 301 VPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
VP++V+ L+ VA T V++EDG VY+FG LG
Sbjct: 219 VPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQLG 262
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 41/134 (30%), Positives = 58/134 (43%)
Query: 52 PGHSIAV-TSKGVVYSFGSNSSGQLGHGTTEEEWRPR--PIRSLXXXXXXXXXXXXXXTM 108
P H + T VY++G N++ LGHG+ + P + S ++
Sbjct: 131 PAHVVFKNTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSV 190
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+S GQVY G G +G + T LV P+LVE L Q A T VL+ +G
Sbjct: 191 FLSQQGQVYTCGHGRGGRLGHGDEQTCLV--PRLVEGLSGHSCSQVAAAKDHTVVLTEDG 248
Query: 169 RVYTFSWGNDARLG 182
VYTF +LG
Sbjct: 249 CVYTFGLNTFHQLG 262
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 94 (38.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 40/164 (24%), Positives = 73/164 (44%)
Query: 38 EACCRRENSQAI----AGPGHSIAVTSKGVVYSFGSN--SSGQ-LGHGTTEEEW----RP 86
E+CC + + + AG H++A T+ G+V+ +G+ S G+ L G T + P
Sbjct: 8 ESCCHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEP 67
Query: 87 RPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVES- 145
+ L + ++DAG+VY +G + G+ + PQ +E+
Sbjct: 68 SRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL---ANEAAFLPVPQKIEAH 124
Query: 146 -LKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN-D-ARLGHHTE 186
+N V AI + +T ++++ F+WG D +LG E
Sbjct: 125 CFQNEKVT--AIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLE 166
Score = 93 (37.8 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 44 ENSQA---IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRP--IRSLXXXXXX 98
ENS+A +AG HS ++T G VY +GSN GQL + E + P P I +
Sbjct: 74 ENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN---EAAFLPVPQKIEAHCFQNEK 130
Query: 99 XXXXXXXXTMLIS--DAGQVYAFGKDSFGEAEYGVQGTKLVT 138
T L++ + G+++ +G+ A+YG G KL T
Sbjct: 131 VTAIWSGWTHLVAQTETGKMFTWGR-----ADYGQLGRKLET 167
Score = 80 (33.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 278 GRVC-TWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATG 319
G VC +WGW +G G G E PK VQAL + V G
Sbjct: 214 GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG 256
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTM 108
+AG HSIA TS Y++G+N+SGQLG+GTT P+ ++ +
Sbjct: 199 VAGGSHSIAYTSTEA-YAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNL 257
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G ++A+G +++G+ G T T QL + G + ++
Sbjct: 258 ALDSTGAIWAWGSNAYGQLGNGTT-TNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNF 316
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
VYT+ + L T + + P + N+P +
Sbjct: 317 TVYTWGFNTLGLLSVGTTGDQLSPAQVRDA-SNVPFTDV 354
Score = 118 (46.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 41/151 (27%), Positives = 68/151 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLXXXXXXXXXXXX 104
Q AG HS+A+ G V+++GSNS+GQL R PR + +
Sbjct: 143 QVAAGGLHSMALAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAG 201
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAV 163
+ + + YA+G ++ G+ G GT L PQ V+ +I + + + G
Sbjct: 202 GSHSIAYTSTEAYAWGNNASGQL--G-NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLA 258
Query: 164 LSREGRVYTFSWGNDA--RLGHHTEPNDVEP 192
L G ++ +WG++A +LG+ T N P
Sbjct: 259 LDSTGAIW--AWGSNAYGQLGNGTTTNQSTP 287
Score = 51 (23.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQ-ALN----DVKAIHVATGDYTTFVVSE-DGDVY 333
V TWG+ G L G + P V+ A N DV+ + V G + T V G ++
Sbjct: 318 VYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERV-VLLGSFFTIVKKNGSGGMW 376
Query: 334 SFGCGESASLG 344
++G LG
Sbjct: 377 AWGYNGYGQLG 387
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 49 IAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTM 108
+AG HSIA TS Y++G+N+SGQLG+GTT P+ ++ +
Sbjct: 199 VAGGSHSIAYTSTEA-YAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNL 257
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+ G ++A+G +++G+ G T T QL + G + ++
Sbjct: 258 ALDSTGAIWAWGSNAYGQLGNGTT-TNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNF 316
Query: 169 RVYTFSWGNDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
VYT+ + L T + + P + N+P +
Sbjct: 317 TVYTWGFNTLGLLSVGTTGDQLSPAQVRDA-SNVPFTDV 354
Score = 118 (46.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 41/151 (27%), Positives = 68/151 (45%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWR--PRPIRSLXXXXXXXXXXXX 104
Q AG HS+A+ G V+++GSNS+GQL R PR + +
Sbjct: 143 QVAAGGLHSMALAG-GTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAG 201
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTS-PQLVESLKNIFVVQAAIGNFFTAV 163
+ + + YA+G ++ G+ G GT L PQ V+ +I + + + G
Sbjct: 202 GSHSIAYTSTEAYAWGNNASGQL--G-NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLA 258
Query: 164 LSREGRVYTFSWGNDA--RLGHHTEPNDVEP 192
L G ++ +WG++A +LG+ T N P
Sbjct: 259 LDSTGAIW--AWGSNAYGQLGNGTTTNQSTP 287
Score = 51 (23.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQ-ALN----DVKAIHVATGDYTTFVVSE-DGDVY 333
V TWG+ G L G + P V+ A N DV+ + V G + T V G ++
Sbjct: 318 VYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERV-VLLGSFFTIVKKNGSGGMW 376
Query: 334 SFGCGESASLG 344
++G LG
Sbjct: 377 AWGYNGYGQLG 387
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 130 (50.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLXXXXXXXXXXXXXXTMLIS 111
H + V G Y++G + GQLG T E W+ P R S+ T+L++
Sbjct: 463 HFVVVNEDGSAYAWGEGTHGQLGL-TALEAWKHYPSRMESVRNYHVVSACAGDGFTILVT 521
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
AG + + G ++ G + SP+L+ L ++ V Q A G LSREG VY
Sbjct: 522 QAGSLLSCGSNA--HLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSREGAVY 579
Query: 172 TFSWG 176
WG
Sbjct: 580 V--WG 582
Score = 52 (23.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/84 (26%), Positives = 32/84 (38%)
Query: 276 QDGRVCTWGWGRYGCLGHGNEECESV--PKVVQALNDVKAIHVATGDYTTFVVSEDGDVY 333
+ G V T G G G C SV P +V ++ + D T V SED +
Sbjct: 678 EGGYVYTMGRNAEG--QRGIRHCNSVDHPTLVDSVKSRYIVKANCSDQCTIVASEDNIIT 735
Query: 334 SFGCGESA-SLGHNAIADG-QVCS 355
+G +G G Q+C+
Sbjct: 736 VWGTRNGLPGIGSTNCGLGLQICT 759
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 98 (39.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+G + TWG G LGHGN+ P V N K ++V+ G+ T ++DG V+++G
Sbjct: 1040 EGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWG 1099
Query: 337 CGESASLG 344
+ G
Sbjct: 1100 KNDFGQCG 1107
Score = 91 (37.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 108 MLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSRE 167
+++S +GQ+ A+G + FG+ G ++ Q+ I + A G F +A + +
Sbjct: 789 LVLSSSGQLSAWGGNRFGQCGVG-HSFRIANLHQVDGDWPAIEKI--ACGQFHSAFICSD 845
Query: 168 GRVYTFSWGNDARLGH--HTEPNDVEPHPLLGTL 199
G ++TF WG +LGH N + P + G +
Sbjct: 846 GSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI 879
Score = 89 (36.4 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 32/130 (24%), Positives = 53/130 (40%)
Query: 51 GPGHSIAVTSKGVVYSFGSNSSGQLGHG--TTEEEWRPRPIRSLXXXXXXXXXXXXXXTM 108
G HS + S G +++FG GQLGHG + P + L T+
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAH-TV 893
Query: 109 LISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREG 168
+++D G+V G S+G+ K+ L L + V A + + ++ +
Sbjct: 894 VLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPL--PLGPLRVRDIATHYYHSICITEDN 951
Query: 169 RVYTFSWGND 178
RV F WG +
Sbjct: 952 RV--FEWGRN 959
Score = 87 (35.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 35/137 (25%), Positives = 55/137 (40%)
Query: 47 QAIA-GPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXX 105
+AIA G H + ++S G + ++G N GQ G G + +
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPAIEKIACGQFH 838
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ SD G ++ FG +G+ +G + P V L V Q A G T VL+
Sbjct: 839 SAFICSD-GSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVTQIACGRAHTVVLT 896
Query: 166 REGRVYTFSWGNDARLG 182
GRV G+ ++G
Sbjct: 897 DTGRVLVCGSGSYGQMG 913
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 113 (44.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGS-NSSGQLGHGTTEEEW-RPRPIR------SLXXXXXX 98
Q G H++ ++ G +YS+GS NSSGQLGHG ++ ++ +P+ I+ +L
Sbjct: 42 QLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVI 101
Query: 99 XXXXXXXXTMLISDAGQVYAFGKDSFGEAEYG 130
T +++D G +Y +G + G+ G
Sbjct: 102 QVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 69 (29.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 308 LNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGH 345
+N +K I ++ G +S+ VYS+G E LGH
Sbjct: 366 MNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGH 403
Score = 69 (29.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 280 VCTWGWGRYGCLGHG--------NEECESVPKVVQALND--VKAIHVATGDYTTFVVSED 329
V +WG +G LGHG N + PK +++L + V I V++G ++ D
Sbjct: 390 VYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLD 449
Query: 330 GDVYSFGCGESASLG 344
+ ++G G LG
Sbjct: 450 SGILTWGKGSDGQLG 464
Score = 67 (28.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 277 DGRVCTWGWGRYGCLGHG-NEECESVPKVVQALN-DVKAIHVATGDYTTFVVS-EDGDVY 333
D + TWG G G LG G + S ++ + ++ + K + + G + +F ++ E ++Y
Sbjct: 449 DSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLEKRELY 508
Query: 334 SFG 336
FG
Sbjct: 509 QFG 511
Score = 53 (23.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 309 NDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
N +K I ++G T +++E+G+ S G GE LG
Sbjct: 564 NRIKQI--SSGYSHTLILNENGECLSIGQGEFGQLG 597
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 112 (44.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 37/140 (26%), Positives = 61/140 (43%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLXXXXXXXXXXX- 103
Q G HS+ +T + V+S G+N+ GQ G E+E + +
Sbjct: 175 QVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVC 234
Query: 104 -XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFT 161
++ ++D G+VY+ G + G+ G+ + ++P +L L + VVQ A
Sbjct: 235 GQDHSLFLTDKGEVYSCGWGADGQT--GLGHYNITSTPSKLGGDLAGVTVVQVATYGDCC 292
Query: 162 AVLSREGRVYTFSWGNDARL 181
LS +G V F WGN L
Sbjct: 293 LALSADGGV--FGWGNSEYL 310
Score = 112 (44.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 42/165 (25%), Positives = 64/165 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
Q + G HS+ +T KG VYS G + GQ G G P + L
Sbjct: 231 QVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGD 290
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S G V+ +G + + T+ V P+ + V Q A G A+L+
Sbjct: 291 CCLALSADGGVFGWGNSEYLQLASVTDSTQ-VNVPRCLPFSGVGKVKQVACGGTGCAILN 349
Query: 166 REGRVYTFSWG---NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG V+ + +G L P + P L G E P V++
Sbjct: 350 EEGHVFVWGYGILGKGPNLSETALPEMIPP-TLFGLTEFNPEVKV 393
Score = 98 (39.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 37/160 (23%), Positives = 68/160 (42%)
Query: 64 VYSFGSNSSGQLG-HGTTEEEWR-----------PRPIRSLXXXXXXXXXXXXXXTMLIS 111
V+ G N QLG H + +++ R P P+ +++++
Sbjct: 128 VWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLT 187
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVLSREGR 169
D V++ G ++ G+ V ++ + V +++ VVQ G + L+ +G
Sbjct: 188 DREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCGQDHSLFLTDKGE 247
Query: 170 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 207
VY+ WG D + LGH+ + P L G L + VVQ+
Sbjct: 248 VYSCGWGADGQTGLGHYNITST--PSKLGGDLAGVTVVQV 285
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V WG Y L + + +VP+ + K VA G +++E+G V+ +
Sbjct: 298 DGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVW 357
Query: 336 GCG 338
G G
Sbjct: 358 GYG 360
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/84 (25%), Positives = 35/84 (41%)
Query: 276 QDGRVCTWGWGRYGCLGHG---NEEC--ESVPKVVQALND----VKAIHVATGDYTTFVV 326
++G V WG YG LG G +E E +P + L + VK + G +
Sbjct: 350 EEGHVFVWG---YGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAAL 406
Query: 327 SEDGDVYSFGCGESASLGHNAIAD 350
+ G+++ +G LG + D
Sbjct: 407 TNKGELFVWGKNIRGCLGIGRLED 430
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVP 302
G + WG GCLG G E + P
Sbjct: 410 GELFVWGKNIRGCLGIGRLEDQYFP 434
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 93 (37.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 27/130 (20%), Positives = 57/130 (43%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI--RSLXXXXXXXXXXXX 104
Q G H + + +G+V+++G+ QLG E +R + + R
Sbjct: 225 QLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMER-FRLKTLDPRPFGLRHVKYIASGE 283
Query: 105 XXTMLISDAGQVYAFGKDSFGEAEYG--VQGTKLVTSPQLVESLKNIFVVQAAIGNFFTA 162
++ ++ ++G + FG+ V+ LVT P+ + N+ + A G +
Sbjct: 284 NHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSL 343
Query: 163 VLSREGRVYT 172
+LS++G +Y+
Sbjct: 344 ILSQDGDLYS 353
Score = 85 (35.0 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 249 RLIEQFQLLNLQPXXXXXXXXXXXXXGQ--------DGRVCTWGWGRYGCLGHGNEECES 300
+++E+F+L L P G+ D ++ +WG ++G G +E+ E
Sbjct: 256 KVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGV-SEDVED 314
Query: 301 VPKVVQ----ALNDVKAIH-VATGDYTTFVVSEDGDVYSFG 336
V + AL D I +A G++ + ++S+DGD+YS G
Sbjct: 315 GALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCG 355
Score = 71 (30.1 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 22/66 (33%), Positives = 29/66 (43%)
Query: 114 GQVYAFGKDSFGEAEYGV--QGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
G+VYA+G E G K+ +P V + +VQ A G L EG V
Sbjct: 184 GEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMV- 242
Query: 172 TFSWGN 177
F+WGN
Sbjct: 243 -FAWGN 247
Score = 69 (29.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 293 HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLGHNAIAD 350
HG + +VP + N K VA G + + V+++G YS+G GE+ ++G D
Sbjct: 378 HG--KARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFED 433
Score = 56 (24.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 46 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTT 80
S A+ G H++A+ + V+S+G N G LG T+
Sbjct: 88 SFAVGGM-HTLALDEESNVWSWGCNDVGALGRDTS 121
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 115 (45.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 38/140 (27%), Positives = 61/140 (43%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLXXXXXXXXXXX- 103
Q G HS+ +T + V+S G+NS GQ G E+E + +
Sbjct: 175 QVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVC 234
Query: 104 -XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAIGNFFT 161
++ ++D G+VY+ G + G+ G+ + ++P +L L + VVQ A
Sbjct: 235 GQDHSLFLTDKGEVYSCGWGADGQT--GLGHYNITSTPSKLGGDLAGVTVVQVATYGDCC 292
Query: 162 AVLSREGRVYTFSWGNDARL 181
LS +G V F WGN L
Sbjct: 293 LALSADGGV--FGWGNSEYL 310
Score = 114 (45.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 44/165 (26%), Positives = 65/165 (39%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
Q + G HS+ +T KG VYS G + GQ G G P + L
Sbjct: 231 QVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGD 290
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S G V+ +G + + T+ V P+ + V Q A G AVL+
Sbjct: 291 CCLALSADGGVFGWGNSEYLQLASVTDSTQ-VNVPRCLPFSGVGKVKQVACGGTGCAVLN 349
Query: 166 REGRVYTFSWG---NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG V+ + +G +L P + P L G E P VQ+
Sbjct: 350 AEGHVFVWGYGILGKGPKLLETAIPEMIPP-TLFGLTEFNPEVQV 393
Score = 101 (40.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 38/160 (23%), Positives = 68/160 (42%)
Query: 64 VYSFGSNSSGQLG-HGTTEEEWR-----------PRPIRSLXXXXXXXXXXXXXXTMLIS 111
V+ G N QLG H + +++ R P P+ +++++
Sbjct: 128 VWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLT 187
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVLSREGR 169
D V++ G +S G+ V ++ + V +++ VVQ G + L+ +G
Sbjct: 188 DREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGE 247
Query: 170 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 207
VY+ WG D + LGH+ + P L G L + VVQ+
Sbjct: 248 VYSCGWGADGQTGLGHYNITST--PSKLGGDLAGVTVVQV 285
Score = 55 (24.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG V WG Y L + + +VP+ + K VA G V++ +G V+ +
Sbjct: 298 DGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVW 357
Query: 336 GCG 338
G G
Sbjct: 358 GYG 360
Score = 48 (22.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES-VPKVV 305
+G V WG YG LG G + E+ +P+++
Sbjct: 351 EGHVFVWG---YGILGKGPKLLETAIPEMI 377
Score = 47 (21.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVP 302
G + WG GCLG G E + P
Sbjct: 410 GELFVWGKNIRGCLGIGRLEDQYFP 434
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 127 (49.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 43/137 (31%), Positives = 57/137 (41%)
Query: 31 LRFLLAGEACCRRENSQAI-AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPI 89
L F L G A +E +I G HS AVT+ G Y+FGSN GQLG T P +
Sbjct: 548 LSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKV 607
Query: 90 RSLXXXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLK-N 148
+ L T+ I +VY++GK + G + L QL E+
Sbjct: 608 QGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYT 667
Query: 149 IFVVQAAIGNFFTAVLS 165
+ V GN AV S
Sbjct: 668 VTSVSCCHGNTLLAVRS 684
Score = 95 (38.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 23/67 (34%), Positives = 31/67 (46%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGC 337
G T+G ++G LG P VQ L +K VA GD T + + +VYS+G
Sbjct: 580 GDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGK 639
Query: 338 GESASLG 344
G LG
Sbjct: 640 GARGRLG 646
Score = 81 (33.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 141 QLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDARLGHHTEPNDVEPHPLLGTLE 200
+ +E + + A G+FFTA L+ G + TF G++ LGH + D+ ++ L
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSL-TDISQPTIVEALL 441
Query: 201 NIPVVQI 207
+VQ+
Sbjct: 442 GYEMVQV 448
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 130 (50.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 42/152 (27%), Positives = 66/152 (43%)
Query: 50 AGPGHSIAVTSK---GVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXX 106
AG G I + S+ G V+ +G N++GQLG E+ P ++ L
Sbjct: 9 AGSGKGIPLPSQPAEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEH 68
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFT-AVLS 165
T +++ +G V+ FG S G+ + ++ +P+ V L V Q A G T A +
Sbjct: 69 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEV--NPRRVLELMGSEVTQIACGRQHTLAFVP 126
Query: 166 REGRVYTFSWGNDARLGHHTEPNDVEPHPLLG 197
G +Y F G +LG N P P+ G
Sbjct: 127 SSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 158
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFG 336
+G V WG G LG +EE P V+ L K ++++ G+ T V+++ G V++FG
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 337 CGESASLGHNAIAD 350
G LGH+++ D
Sbjct: 83 AGSCGQLGHDSMND 96
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 96 (38.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG+ + +P + +L + +S +++
Sbjct: 397 LTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELF 456
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLV 143
A+G+ G G + + PQLV
Sbjct: 457 AWGRGDGGRLGLGTRESHCC--PQLV 480
Score = 86 (35.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 394 TACLTDRGIIMTFGSGSNGCLGHGSLND--ISQPTIVEALLGYEMVQVACGASHVLALST 451
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEP 192
E ++ + G+ RLG T + P
Sbjct: 452 ERELFAWGRGDGGRLGLGTRESHCCP 477
Score = 76 (31.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G P VQ L +K VA GD T + +G+V+S+G G LG
Sbjct: 578 GSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 630
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 96 (38.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 58 VTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVY 117
+T +G++ +FGS S+G LGHG+ + +P + +L + +S +++
Sbjct: 401 LTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELF 460
Query: 118 AFGKDSFGEAEYGVQGTKLVTSPQLV 143
A+G+ G G + + PQLV
Sbjct: 461 AWGRGDGGRLGLGTRESHCC--PQLV 484
Score = 86 (35.3 bits), Expect = 0.00078, Sum P(2) = 0.00077
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSR 166
T ++D G + FG S G +G ++ P +VE+L +VQ A G LS
Sbjct: 398 TACLTDRGIIMTFGSGSNGCLGHGSLND--ISQPTIVEALLGYEMVQVACGASHVLALST 455
Query: 167 EGRVYTFSWGNDARLGHHTEPNDVEP 192
E ++ + G+ RLG T + P
Sbjct: 456 ERELFAWGRGDGGRLGLGTRESHCCP 481
Score = 76 (31.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 292 GHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
G P VQ L +K VA GD T + +G+V+S+G G LG
Sbjct: 582 GSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 634
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 112 (44.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 42/145 (28%), Positives = 66/145 (45%)
Query: 35 LAGEACCRRENSQAIAGPG-HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLX 93
L + C+ ++ ++IAG G HS +T G ++ G N +GQLG TE+ +L
Sbjct: 41 LLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALS 100
Query: 94 XXXXXXXXXXXXXTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLV-ESLKNIFV 151
T+++ AG V + G ++FG+ + G L+ PQ + +SLK V
Sbjct: 101 GFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLI--PQKIKQSLKEKAV 158
Query: 152 VQAAIGNFFTAVLSREGRVYTFSWG 176
AA G + G V F WG
Sbjct: 159 GIAA-GLRHALAATESGLV--FQWG 180
Score = 92 (37.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 36/128 (28%), Positives = 57/128 (44%)
Query: 54 HSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIR--SLXXXXXXXXXXXXXXTMLIS 111
HS + V G+NS GQLG G E+ P+ ++ S + +I+
Sbjct: 7 HSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVIT 66
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVY 171
AG+++ G + G+ G+ T+ V L +L V + A G FT +L R G V
Sbjct: 67 GAGELFVCGHNKAGQL--GLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLV- 123
Query: 172 TFSWGNDA 179
S G++A
Sbjct: 124 -LSCGSNA 130
Score = 64 (27.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 275 GQDGRVCTWGWGRYGCLG--HGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDV 332
G+ G V + G +G LG + C K+ Q+L + KA+ +A G +E G V
Sbjct: 118 GRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKE-KAVGIAAGLRHALAATESGLV 176
Query: 333 YSFGCG 338
+ +G G
Sbjct: 177 FQWGTG 182
Score = 43 (20.2 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 302 PKVVQALNDVKAIHVATGDY 321
P ++ L DVK VA G Y
Sbjct: 205 PCEIKGLEDVKVKRVAAGSY 224
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 101 (40.6 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQL---G---HGTTEEEWRPRPIRSLXXXXXXXX 100
QA+AG HS +TS+G VY G N G + G G+T+E + + +
Sbjct: 189 QAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVM 248
Query: 101 XXXXXX-TMLISDAGQVYAFG--KDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIG 157
T ++D G V A+G ++S G + K+ +P ++ +V+ A G
Sbjct: 249 LAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAG 308
Query: 158 NFFTAVLSREGRVYTFSWGNDARLGHHTEPNDV 190
+L +G + TF G +LG + +
Sbjct: 309 ENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTI 341
Score = 68 (29.0 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 275 GQDGRVCTWGWGRYGCLGHGN-----EECESVPKVVQALN-DVKAIHVATGDYTTFVVSE 328
G DG+V G LG GN ++ + +Q + D K + V+ T+ SE
Sbjct: 450 GSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSE 509
Query: 329 DGDVYSFGCGESASLG 344
DG Y++G + LG
Sbjct: 510 DGTAYAWGFDTTGQLG 525
Score = 64 (27.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 310 DVKAIHVATGDYTTFVVSEDGDVYSFGCGESASLG 344
DV A +V + T V EDG Y+FG A LG
Sbjct: 368 DVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLG 402
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 97 (39.2 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 37/123 (30%), Positives = 51/123 (41%)
Query: 50 AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRSLXXXXX-------XXXXX 102
AG H AVT G+V +G NS GQ G T+ P P+ +
Sbjct: 87 AGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVAC 146
Query: 103 XXXXTMLISDAGQVYAFGKDSFGEAEYG-VQGTKLVTSPQLVESLKNIFVVQAAIGNFFT 161
T+ +S+ +V+A+G + G V V PQ VE L +VVQ A G F +
Sbjct: 147 GAQHTLALSNKHEVWAWGSG----CQLGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHS 202
Query: 162 AVL 164
L
Sbjct: 203 LAL 205
Score = 81 (33.6 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 280 VCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSFGCGE 339
V +WG G G LGHG+ P +++L+ + + + G + ++ VYS+G +
Sbjct: 522 VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEK 581
Query: 340 SASLG 344
LG
Sbjct: 582 FGQLG 586
Score = 74 (31.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 279 RVCTWGWGRYGCLGHGNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYS---F 335
+V +WG ++G LG N +VP + + ++ VA G T +++ DGD Y +
Sbjct: 573 QVYSWGSEKFGQLGRMNSP-STVPNLTTVSDGIRVWDVAAGQTHTLLLA-DGDCYQPILY 630
Query: 336 GCGESASLGHNAIADGQVCSLL 357
GE + G C L
Sbjct: 631 YSGEQIGYVNQVFGGGLNCLAL 652
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 87 (35.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 277 DGRVCTWGWGRY----GCLGH-GNEECESVPKVVQALNDVKAIHVATGDYTTFVVSEDGD 331
+G+V +GWG + G LG + ++ PK++ L +K H+ GD +++ G
Sbjct: 249 EGQV--YGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIK--HLVCGDNHVLALNDKGA 304
Query: 332 VYSFGCGESASLGHNAI 348
V S+G G+ LG I
Sbjct: 305 VLSWGSGQQNQLGRRII 321
Score = 77 (32.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 116 VYAFGKDSFGEAEYGVQGTKL-VTSPQLVESL--KNIFVVQAAIGNFFTAVLSREGRVYT 172
VY G+ S GE GV + V P+L L ++ VVQ A+G L+ + +V T
Sbjct: 112 VYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLT 171
Query: 173 FSWG-ND-ARLGHHT 185
WG ND LG T
Sbjct: 172 --WGVNDQGALGRDT 184
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 112 (44.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 39/160 (24%), Positives = 70/160 (43%)
Query: 64 VYSFGSNSSGQLG-HGTTEEEWR-----------PRPIRSLXXXXXXXXXXXXXXTMLIS 111
V+ G N QLG H + +++ R P P+ +++++
Sbjct: 137 VWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLHRPQETQVLQVSCGRAHSLVLT 196
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVLSREGR 169
D V++ G +S+G+ V ++ + V +++ VVQ A G + L+ +G
Sbjct: 197 DGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVACGQDHSLFLTDKGE 256
Query: 170 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 207
VY+ WG D + LGH+ + P L G L + VVQ+
Sbjct: 257 VYSCGWGADGQTGLGHYNITS--APTKLGGDLAGVNVVQV 294
Score = 48 (22.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 20/83 (24%), Positives = 37/83 (44%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES-VPKVVQA-------LN-DVKAIHVATGDYTTFVVS 327
+G V WG YG LG G E+ +P+++ LN +V+ + G ++
Sbjct: 360 EGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALT 416
Query: 328 EDGDVYSFGCGESASLGHNAIAD 350
+ G+++ +G LG + D
Sbjct: 417 DRGELFVWGKNIRGCLGIGRLED 439
Score = 47 (21.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVP 302
G + WG GCLG G E + P
Sbjct: 419 GELFVWGKNIRGCLGIGRLEDQYFP 443
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 110 (43.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 43/165 (26%), Positives = 64/165 (38%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
Q G HS+ +T KG VYS G + GQ G G P + L
Sbjct: 234 QVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGD 293
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S G ++ +G + + T+ V P+ + V QAA G AVL+
Sbjct: 294 CCLAVSADGGLFGWGNSEYLQLASVTDSTQ-VNVPRCLHFSGVGKVRQAACGGTGCAVLN 352
Query: 166 REGRVYTFSWG---NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG V+ + +G L P + P L G E P +Q+
Sbjct: 353 GEGHVFVWGYGILGKGPNLVESAVPEMIPP-TLFGLTEFNPEIQV 396
Score = 108 (43.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 39/141 (27%), Positives = 63/141 (44%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEW--RPRPIRSLXXXXXXXXXXX- 103
Q G HS+ +T + V+S G+NS GQ G E E + +
Sbjct: 178 QVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVAC 237
Query: 104 -XXXTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSP-QLVESLKNIFVVQAAI-GNFF 160
++ ++D G+VY+ G + G+ G+ + +SP +L L + V+Q A G+
Sbjct: 238 GQDHSLFLTDKGEVYSCGWGADGQT--GLGHYNITSSPTKLGGDLAGVNVIQVATYGDCC 295
Query: 161 TAVLSREGRVYTFSWGNDARL 181
AV S +G + F WGN L
Sbjct: 296 LAV-SADGGL--FGWGNSEYL 313
Score = 107 (42.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 107 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVL 164
+++++D V++ G +S+G+ V ++ + V +++ VVQ A G + L
Sbjct: 186 SLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFL 245
Query: 165 SREGRVYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 207
+ +G VY+ WG D + LGH+ + P L G L + V+Q+
Sbjct: 246 TDKGEVYSCGWGADGQTGLGHYNITSS--PTKLGGDLAGVNVIQV 288
Score = 51 (23.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES-VPKVV 305
+G V WG YG LG G ES VP+++
Sbjct: 354 EGHVFVWG---YGILGKGPNLVESAVPEMI 380
Score = 48 (22.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECE-SVPKVVQALNDVKAIHVATGDYTTFVVSEDGDVYSF 335
DG + WG Y L + + +VP+ + K A G V++ +G V+ +
Sbjct: 301 DGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVW 360
Query: 336 GCG 338
G G
Sbjct: 361 GYG 363
Score = 47 (21.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVP 302
G + WG GCLG G E + P
Sbjct: 413 GELFVWGKNIRGCLGIGRLEDQYFP 437
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 111 (44.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 39/160 (24%), Positives = 70/160 (43%)
Query: 64 VYSFGSNSSGQLG-HGTTEEEWR-----------PRPIRSLXXXXXXXXXXXXXXTMLIS 111
V+ G N QLG H + +++ R P P+ +++++
Sbjct: 131 VWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLVLT 190
Query: 112 DAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIF--VVQAAIGNFFTAVLSREGR 169
D V++ G +S+G+ V ++ + V +++ VVQ A G + L+ +G
Sbjct: 191 DGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDQGE 250
Query: 170 VYTFSWGNDAR--LGHHTEPNDVEPHPLLGTLENIPVVQI 207
VY+ WG D + LGH+ + P L G L + VVQ+
Sbjct: 251 VYSCGWGADGQTGLGHYNITST--PTKLGGDLAGVNVVQV 288
Score = 47 (21.6 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVP 302
G + WG GCLG G E + P
Sbjct: 413 GELFVWGKNIRGCLGIGRLEDQYFP 437
Score = 45 (20.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 277 DGRVCTWGWGRYGCLGHGNEECES-VPKVV 305
+G V WG YG LG G E+ +P+++
Sbjct: 354 EGHVFVWG---YGILGKGPNLLETALPEMI 380
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 110 (43.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 44/165 (26%), Positives = 66/165 (40%)
Query: 47 QAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEEEWRPRPIRS-LXXXXXXXXXXXXX 105
Q + G HS+ +T KG VYS G + GQ G G + P + L
Sbjct: 235 QVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGGDLAGVNVVQVATYGD 294
Query: 106 XTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTSPQLVESLKNIFVVQAAIGNFFTAVLS 165
+ +S G ++ +G + + T+ V P+ + V QAA G AVL+
Sbjct: 295 CCLAVSAEGGLFGWGNSEYLQLASVTDSTQ-VNVPRCLPFSGVGKVKQAACGGTGCAVLN 353
Query: 166 REGRVYTFSWG---NDARLGHHTEPNDVEPHPLLGTLENIPVVQI 207
EG V+ + +G L P +V P L G E P V +
Sbjct: 354 GEGHVFVWGYGILGKGPNLVETAFP-EVIPPTLFGLTEFNPGVHV 397
Score = 47 (21.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 278 GRVCTWGWGRYGCLGHGNEECESVP 302
G + WG GCLG G E + P
Sbjct: 414 GELFVWGKNIRGCLGIGRLEDQYFP 438
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 380 330 0.00089 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 194
No. of states in DFA: 618 (66 KB)
Total size of DFA: 242 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.80u 0.16s 22.96t Elapsed: 00:00:01
Total cpu time: 22.88u 0.16s 23.04t Elapsed: 00:00:01
Start: Fri May 10 02:27:09 2013 End: Fri May 10 02:27:10 2013
WARNINGS ISSUED: 1